Miyakogusa Predicted Gene

Lj0g3v0129789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129789.1 Non Chatacterized Hit- tr|A5BQP2|A5BQP2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.73,3e-17,seg,NULL; Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin,CUFF.8017.1
         (590 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G38770.1 | Symbols: PRP4, ATPRP4 | proline-rich protein 4 | c...   152   5e-37
AT2G21140.1 | Symbols: ATPRP2, PRP2 | proline-rich protein 2 | c...   137   2e-32

>AT4G38770.1 | Symbols: PRP4, ATPRP4 | proline-rich protein 4 |
           chr4:18097009-18098448 REVERSE LENGTH=448
          Length = 448

 Score =  152 bits (385), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 86/166 (51%), Positives = 103/166 (62%), Gaps = 8/166 (4%)

Query: 1   MQIFTRRQGALLCFWLSVFFVVVGFCHGDSTVEVVGLGECADCKEYNIKTSQAFSGLRVT 60
           M+I    +G++ C  L V  ++         VEVVG  E        IKT  AFSGLRVT
Sbjct: 1   MRILPEPRGSVPCLLLLVSVLLSATLSLARVVEVVGYAES------KIKTPHAFSGLRVT 54

Query: 61  IDCKAENGHFKTRGAGELDTNGNFKVSLPHDIVK-SGELKEECYAQLHSSSAAPCPAHDG 119
           IDCK   GHF T+G+G +D  G F +++PHDIV  +G LKEECYAQLHS++  PCPAHDG
Sbjct: 55  IDCKVNKGHFVTKGSGNIDDKGKFGLNIPHDIVSDNGALKEECYAQLHSAAGTPCPAHDG 114

Query: 120 LHDTKIVFKSKTDDNKHTLGPAGKLKFSSMTCTSEFFWPFFKHPLF 165
           L  TKIVF SK+ D KH LG    LKFS   C S+FFWP  K P F
Sbjct: 115 LESTKIVFLSKSGD-KHILGLKQNLKFSPEICVSKFFWPMPKLPPF 159


>AT2G21140.1 | Symbols: ATPRP2, PRP2 | proline-rich protein 2 |
           chr2:9060868-9062035 REVERSE LENGTH=321
          Length = 321

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/162 (50%), Positives = 97/162 (59%), Gaps = 8/162 (4%)

Query: 1   MQIFTRRQGALLCFWLSVFFVVVGFCHGDS-TVEVVGLGECADCKEYN-IKTSQAFSGLR 58
           M+I  +  G  LC  L   F +    H  S  V+VVG  E     E + IK   AFSGLR
Sbjct: 1   MRILPKSGGGALC--LLFVFALCSVAHSLSCDVKVVGDVEVIGYSEISKIKIPNAFSGLR 58

Query: 59  VTIDCKAEN--GHFKTRGAGELDTNGNFKVSLPHDIV-KSGELKEECYAQLHSSSAAPCP 115
           VTI+CKA +  GHF TRG+GE+D  G F +++PHDIV   G LKE CYA L S+   PCP
Sbjct: 59  VTIECKAADSKGHFVTRGSGEVDETGKFHLNIPHDIVGDDGTLKEACYAHLQSAFGNPCP 118

Query: 116 AHDGLHDTKIVFKSKTDDNKHTLGPAGKLKFSSMTCTSEFFW 157
           AHDGL  +KIVF SK+  N H LG    LKFS   C S+FFW
Sbjct: 119 AHDGLEASKIVFLSKSGQN-HVLGLKKSLKFSPEVCISKFFW 159