Miyakogusa Predicted Gene

Lj0g3v0129239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129239.1 Non Chatacterized Hit- tr|I1L4P2|I1L4P2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57397 PE,69.23,4e-19,
,CUFF.7813.1
         (102 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65960.1 | Symbols:  | GTP binding | chr5:26385413-26387197 F...    59   7e-10

>AT5G65960.1 | Symbols:  | GTP binding | chr5:26385413-26387197
           FORWARD LENGTH=393
          Length = 393

 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 4/98 (4%)

Query: 1   MWPGMILKSGDRISQPSFPEKEELSSEDSDYEQDYEVLSACSTDPWKDTELECFCA---- 56
           MWPGMILKSGDRI++P  P+ EELS E+S+YE +YEVLSA S DPW + E     A    
Sbjct: 219 MWPGMILKSGDRINEPVLPQGEELSEEESEYELEYEVLSAGSGDPWDNIEERWVSASETH 278

Query: 57  TSLDAGGSAPHDKPTTDCEHEAESKSNKEFQPTTSCID 94
           +  DAGGS   +    +      +K ++E  P+ S ++
Sbjct: 279 SHADAGGSTSQENLHVENSMVKPNKVDEELLPSGSRLE 316