Miyakogusa Predicted Gene
- Lj0g3v0129149.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0129149.2 Non Chatacterized Hit- tr|I1M9S9|I1M9S9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20417
PE,63.1,0,seg,NULL; zf-RING_2,Zinc finger, RING-type; RING/U-box,NULL;
ZINC FINGER (C3HC4-TYPE RING FINGER) FA,CUFF.7806.2
(597 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 251 1e-66
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 251 1e-66
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 247 1e-65
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 247 1e-65
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 195 9e-50
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 91 3e-18
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 89 8e-18
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 85 2e-16
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 85 2e-16
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 85 2e-16
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 84 2e-16
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 81 2e-15
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 77 3e-14
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 77 3e-14
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 77 5e-14
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 75 9e-14
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 75 9e-14
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 67 4e-11
AT2G37150.2 | Symbols: | RING/U-box superfamily protein | chr2:... 62 8e-10
AT2G37150.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 8e-10
AT2G37150.3 | Symbols: | RING/U-box superfamily protein | chr2:... 62 9e-10
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 52 1e-06
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 191/531 (35%), Positives = 269/531 (50%), Gaps = 73/531 (13%)
Query: 117 MGEYSGKRGINGVVVPRKNMGLLFRDTANTRDRNGKN---CSRLGCSSKVNPMKVAHIRS 173
M +GKR ++ +VVPRK GL R+ N D GKN CSR+GC++KV K + I S
Sbjct: 1 MDGCAGKRSVDRLVVPRKASGLTLRENMNKTD--GKNVPFCSRVGCTAKVTSTKRSRIGS 58
Query: 174 SEEGIXXXXXXXXXXXC-KEAIGCSSRTT------RNPGKPSIERQKMLSFESDSSDT-- 224
++ KE +G SSRT R P K + RQ S +++SS+T
Sbjct: 59 TDNNTKVGLPPVPSTLNRKEIVGSSSRTPGGFGYLRKPAKVTARRQPSSSLDTESSETSC 118
Query: 225 ---------------LLKRNSIE-------SSNVMRMKVQSSSVASD--TQSQRNFDRRP 260
KR +I S V+ K SSS + + + R
Sbjct: 119 IHDDPAATEPTLPRQKTKRVTINVHPQSAVSREVVITKAGSSSRGTSRISHPKSELGTRD 178
Query: 261 GLRQQEIKSTSP----VTRAVASKYGLQNLRCNTISDIIPTGCSSSDSTFNKRKGMIKKR 316
L + ++S R S++ L+NL CN++SD++PT +S+ + + KK+
Sbjct: 179 ALTGPSVSTSSGNSEHTVRGGLSRHRLRNLSCNSVSDVLPTNSNSA-----TKISVTKKK 233
Query: 317 NCEGESSSTVRGKKMTGSSMEGLN--SGPRNSICISDSRRSINVPSHRDSITASVRAQRS 374
N +GESS + +G K + + N S N + +SD+RR+ VPS RDS T S
Sbjct: 234 NADGESSLSSKGSKTSVLVPKVRNQISSHGNGVTVSDNRRNRVVPSIRDSSTVV-----S 288
Query: 375 ISSRARGRFSSQGNEHQRATNVSPVTVPLLPHSGNA----PGISYPLGXXXXXXXXXXXX 430
R G F G + S T +PH P +S+
Sbjct: 289 NGCRRAGYF---GRSERLGATASSATSRQMPHPTTPTDPNPSLSF------CPSNIYSST 339
Query: 431 EQLYGVMPVSPAEY--STALTSQDRFRRYNIDGIAEVLLALERIEQDEELTHEQILLLET 488
+++ MP SP E S++L ++D YN++GIAEVLLALERIE DEELT+EQ+ +ET
Sbjct: 340 GRVHSNMPGSPTEADPSSSLVNRDGLSHYNMNGIAEVLLALERIEHDEELTYEQLASIET 399
Query: 489 NLFLSGL--NFDHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSIFEPG 546
NLF SG+ +D HRDMRLDID KMGTVST L+EEALS LK+SI++
Sbjct: 400 NLFSSGMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQ-- 457
Query: 547 PTEEAAEDYNEDKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQEWLRL 597
T+E DDIKC ICQEEY+ DE+GT+ C+H++HV C+Q+WLR+
Sbjct: 458 ETDETGSISLYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRM 508
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 191/531 (35%), Positives = 269/531 (50%), Gaps = 73/531 (13%)
Query: 117 MGEYSGKRGINGVVVPRKNMGLLFRDTANTRDRNGKN---CSRLGCSSKVNPMKVAHIRS 173
M +GKR ++ +VVPRK GL R+ N D GKN CSR+GC++KV K + I S
Sbjct: 1 MDGCAGKRSVDRLVVPRKASGLTLRENMNKTD--GKNVPFCSRVGCTAKVTSTKRSRIGS 58
Query: 174 SEEGIXXXXXXXXXXXC-KEAIGCSSRTT------RNPGKPSIERQKMLSFESDSSDT-- 224
++ KE +G SSRT R P K + RQ S +++SS+T
Sbjct: 59 TDNNTKVGLPPVPSTLNRKEIVGSSSRTPGGFGYLRKPAKVTARRQPSSSLDTESSETSC 118
Query: 225 ---------------LLKRNSIE-------SSNVMRMKVQSSSVASD--TQSQRNFDRRP 260
KR +I S V+ K SSS + + + R
Sbjct: 119 IHDDPAATEPTLPRQKTKRVTINVHPQSAVSREVVITKAGSSSRGTSRISHPKSELGTRD 178
Query: 261 GLRQQEIKSTSP----VTRAVASKYGLQNLRCNTISDIIPTGCSSSDSTFNKRKGMIKKR 316
L + ++S R S++ L+NL CN++SD++PT +S+ + + KK+
Sbjct: 179 ALTGPSVSTSSGNSEHTVRGGLSRHRLRNLSCNSVSDVLPTNSNSA-----TKISVTKKK 233
Query: 317 NCEGESSSTVRGKKMTGSSMEGLN--SGPRNSICISDSRRSINVPSHRDSITASVRAQRS 374
N +GESS + +G K + + N S N + +SD+RR+ VPS RDS T S
Sbjct: 234 NADGESSLSSKGSKTSVLVPKVRNQISSHGNGVTVSDNRRNRVVPSIRDSSTVV-----S 288
Query: 375 ISSRARGRFSSQGNEHQRATNVSPVTVPLLPHSGNA----PGISYPLGXXXXXXXXXXXX 430
R G F G + S T +PH P +S+
Sbjct: 289 NGCRRAGYF---GRSERLGATASSATSRQMPHPTTPTDPNPSLSF------CPSNIYSST 339
Query: 431 EQLYGVMPVSPAEY--STALTSQDRFRRYNIDGIAEVLLALERIEQDEELTHEQILLLET 488
+++ MP SP E S++L ++D YN++GIAEVLLALERIE DEELT+EQ+ +ET
Sbjct: 340 GRVHSNMPGSPTEADPSSSLVNRDGLSHYNMNGIAEVLLALERIEHDEELTYEQLASIET 399
Query: 489 NLFLSGL--NFDHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSIFEPG 546
NLF SG+ +D HRDMRLDID KMGTVST L+EEALS LK+SI++
Sbjct: 400 NLFSSGMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQ-- 457
Query: 547 PTEEAAEDYNEDKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQEWLRL 597
T+E DDIKC ICQEEY+ DE+GT+ C+H++HV C+Q+WLR+
Sbjct: 458 ETDETGSISLYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRM 508
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 281/526 (53%), Gaps = 70/526 (13%)
Query: 117 MGEYSGKRGINGVVVPRKNMGLLFRDTANTRDRNGKN----CSRLGCSSKVNPMKVAHIR 172
M + GKR + ++PRK GL+ + N + ++ K+ CSR+GCSS+V+ K I
Sbjct: 1 MDGFKGKR-TSRPIMPRKASGLVLHE--NMKKKDDKSVVPICSRIGCSSRVSSTKGDLI- 56
Query: 173 SSEEGIXXXXXXXXXXXCKEAIGCSSRT------TRNPGKPSIERQ--KMLSFESDSSDT 224
+ KE +G SSR+ T+ K RQ +L +S S +
Sbjct: 57 -DHKAKATVSSFRSPLSGKETVGSSSRSMSGFGGTKKASKVIGRRQLSSLLDMDSSESSS 115
Query: 225 LLKRNSIESSNVMRMKVQSSSVASDTQSQ-----------------RNFDRRPGL--RQQ 265
+ + + ++ R K + S+++ ++S R+ +RP L R
Sbjct: 116 VNEDSPTSERSLPRGKTKESTISVHSESSVSGEVVTEAGSSSRGTGRSIHQRPDLVSRDA 175
Query: 266 EIKSTSPVTRAVASKYGLQNLRCNTISDIIPTGCSSSDSTFNKRKGMIKKRNCEGESSST 325
+ ++ RA +K GL++LR + SD++P S+ST ++ + +K+ +GESSS+
Sbjct: 176 RVSNSEQNARASVNKNGLRDLRNKSGSDVLP-----SNSTPTRKSNIFRKKTSDGESSSS 230
Query: 326 VRGKKMTGSSMEGLN-SGPR-NSICISDSRRSINVPSHRDSITASVRAQRSISSRARGRF 383
RG K GS + G N S P+ N I +S+ RR+ N+PS RD+ S S + R+ G +
Sbjct: 231 SRGNKTEGSVVGGKNISSPQGNGITMSEPRRNRNLPSVRDNSVVS-----SSTRRSTGYY 285
Query: 384 SSQGNEHQRATNVSPVTVPLLPH------SGNAPGISYPLGXXXXXXXXXXXXEQLYGVM 437
G RA V+ + P P S +A PL L +M
Sbjct: 286 GRTG----RAGAVATLQAPRPPTRADLNPSRSAEASRSPLNSYSRPISSNGRLRSL--MM 339
Query: 438 PVSPAE--YSTALTSQDRFRRYNIDGIAEVLLALERIEQDEELTHEQILLLETNLFLSGL 495
P SP+E S +L ++D FRRYN++G+AEVLLALERIEQDEELT+EQ+ +LETNLFL+G+
Sbjct: 340 PGSPSEAGLSRSLMNRDTFRRYNMNGVAEVLLALERIEQDEELTYEQLAVLETNLFLNGM 399
Query: 496 N--FDHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAE 553
+ D HRDMRLDID KMGTVST L+EEAL LK SI+ P + ++
Sbjct: 400 SSFHDQHRDMRLDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRP---NDESD 456
Query: 554 D--YNEDKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQEWLRL 597
D N+D DD+KC ICQEEY+ DEVGTL C+H +HV C Q+WLR+
Sbjct: 457 DICLNKD-DDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRM 501
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 281/526 (53%), Gaps = 70/526 (13%)
Query: 117 MGEYSGKRGINGVVVPRKNMGLLFRDTANTRDRNGKN----CSRLGCSSKVNPMKVAHIR 172
M + GKR + ++PRK GL+ + N + ++ K+ CSR+GCSS+V+ K I
Sbjct: 1 MDGFKGKR-TSRPIMPRKASGLVLHE--NMKKKDDKSVVPICSRIGCSSRVSSTKGDLI- 56
Query: 173 SSEEGIXXXXXXXXXXXCKEAIGCSSRT------TRNPGKPSIERQ--KMLSFESDSSDT 224
+ KE +G SSR+ T+ K RQ +L +S S +
Sbjct: 57 -DHKAKATVSSFRSPLSGKETVGSSSRSMSGFGGTKKASKVIGRRQLSSLLDMDSSESSS 115
Query: 225 LLKRNSIESSNVMRMKVQSSSVASDTQSQ-----------------RNFDRRPGL--RQQ 265
+ + + ++ R K + S+++ ++S R+ +RP L R
Sbjct: 116 VNEDSPTSERSLPRGKTKESTISVHSESSVSGEVVTEAGSSSRGTGRSIHQRPDLVSRDA 175
Query: 266 EIKSTSPVTRAVASKYGLQNLRCNTISDIIPTGCSSSDSTFNKRKGMIKKRNCEGESSST 325
+ ++ RA +K GL++LR + SD++P S+ST ++ + +K+ +GESSS+
Sbjct: 176 RVSNSEQNARASVNKNGLRDLRNKSGSDVLP-----SNSTPTRKSNIFRKKTSDGESSSS 230
Query: 326 VRGKKMTGSSMEGLN-SGPR-NSICISDSRRSINVPSHRDSITASVRAQRSISSRARGRF 383
RG K GS + G N S P+ N I +S+ RR+ N+PS RD+ S S + R+ G +
Sbjct: 231 SRGNKTEGSVVGGKNISSPQGNGITMSEPRRNRNLPSVRDNSVVS-----SSTRRSTGYY 285
Query: 384 SSQGNEHQRATNVSPVTVPLLPH------SGNAPGISYPLGXXXXXXXXXXXXEQLYGVM 437
G RA V+ + P P S +A PL L +M
Sbjct: 286 GRTG----RAGAVATLQAPRPPTRADLNPSRSAEASRSPLNSYSRPISSNGRLRSL--MM 339
Query: 438 PVSPAE--YSTALTSQDRFRRYNIDGIAEVLLALERIEQDEELTHEQILLLETNLFLSGL 495
P SP+E S +L ++D FRRYN++G+AEVLLALERIEQDEELT+EQ+ +LETNLFL+G+
Sbjct: 340 PGSPSEAGLSRSLMNRDTFRRYNMNGVAEVLLALERIEQDEELTYEQLAVLETNLFLNGM 399
Query: 496 N--FDHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAE 553
+ D HRDMRLDID KMGTVST L+EEAL LK SI+ P + ++
Sbjct: 400 SSFHDQHRDMRLDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRP---NDESD 456
Query: 554 D--YNEDKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQEWLRL 597
D N+D DD+KC ICQEEY+ DEVGTL C+H +HV C Q+WLR+
Sbjct: 457 DICLNKD-DDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRM 501
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 203/377 (53%), Gaps = 36/377 (9%)
Query: 229 NSIESSNVMRMKVQSSSVASDTQSQRNFDRRPGLRQQEIKSTSPVTRAVASKYGLQNLRC 288
N + V+ + + S + S ++ +R F +R GL +QE P ++ ++ G L
Sbjct: 133 NKLIYGKVITPEAECSKLPSSSRIKRGFRQRFGLSKQEFH-PGPSGQSTSANRGCSPL-- 189
Query: 289 NTISDIIPTGCSSSDSTFNKRKGMIKKRNCEGESSST--VRGKKMTGS---SMEGLNSGP 343
+S +IP+G D +++ I K GESSS+ RGK +T + + P
Sbjct: 190 --LSGVIPSGFGL-DKRLSRKADTISKTKVYGESSSSSSARGKNVTEPPPVEVRRRSFNP 246
Query: 344 RNSICISDSRRSINVPSHRDSITASVRAQRSISSRARGRFSSQGNEHQRATNVSPVTVPL 403
R S+ SDSRR+ + D+ ASV +QR +++R R G + +S VT
Sbjct: 247 RGSV--SDSRRARHCILDDDNDVASVGSQR-LANRNNSRIRGSGRD-----GLSSVTAAE 298
Query: 404 LPHSGNAPGISYPLGXXXXXXXXXXXXEQLYGVMPVSPAEYSTALTSQDRFRRYNIDGIA 463
+ + + ++ P+ +L+ P S +L S D FR YN+DGI+
Sbjct: 299 MSQTETSNNLNSPVSL------------ELFSGFP--EFGLSGSLLSHDSFRSYNLDGIS 344
Query: 464 EVLLALERIEQDEELTHEQILLLETNLFLSGLNF-DHHRDMRLDIDXXXXXXXXXXXXKM 522
E+L L+RIEQD EL +E +L++ET L L GL+F D HRDMRLDID ++
Sbjct: 345 EILPELDRIEQDIELNYEDLLIMETGLLLGGLSFHDQHRDMRLDIDNMSYEELLALEERI 404
Query: 523 GTVSTTLTEEALSACLKRSIFEPGPTEEAA--EDYNEDKDDIKCCICQEEYIVADEVGTL 580
GTVST LTEEA+S CLK SI++ P + + +++K+D KC ICQEEY + DEVG L
Sbjct: 405 GTVSTALTEEAISKCLKTSIYQMKPLSYGSITKSPSDNKEDAKCSICQEEYTIGDEVGRL 464
Query: 581 QCEHIFHVVCIQEWLRL 597
CEH +HV C+QEWLR+
Sbjct: 465 HCEHTYHVKCVQEWLRI 481
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 447 ALTSQDRFR-RYNIDGIAEVLLALERIEQDEELTHEQILLLETNLFLSGL-NFDHHRDMR 504
AL + R R R + + VL + R + L E ++LL ++ G D +RDMR
Sbjct: 526 ALAAASRGRSRLMVSQMQNVLDVMRRDANNNNLRLEDVMLLNHSVLFDGATGHDRYRDMR 585
Query: 505 LDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYNEDKDDIKC 564
LD+D ++G V T + EE +S LK+ ++ + +D C
Sbjct: 586 LDVDNMSYEELLALEERIGDVCTGVNEETISNRLKQRKYK--------SNTKSPQDAEPC 637
Query: 565 CICQEEYIVADEVGTLQCEHIFHVVCIQEWLR 596
C+CQEEY +++GTL+C H FH CI+EWL+
Sbjct: 638 CVCQEEYTEGEDMGTLECGHEFHSQCIKEWLK 669
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 10/138 (7%)
Query: 462 IAEVLLALERIEQDEELTHEQILLLETNLFLSGLN--FDHHRDMRLDIDXXXXXXXXXXX 519
I+E+ L + + E L E ++ + L G+ D HRDMRLD+D
Sbjct: 523 ISEIRQVLSAMRRGENLRFEDYMVFDP-LIYQGMAEMHDRHRDMRLDVDNMSYEELLALG 581
Query: 520 XKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYNEDKDDIKCCICQEEYIVADEVGT 579
++G VST L+EE + +K+ T AA + +D CC+CQEEY D++GT
Sbjct: 582 ERIGDVSTGLSEEVILKVMKQHKH----TSSAAGSH---QDMEPCCVCQEEYAEGDDLGT 634
Query: 580 LQCEHIFHVVCIQEWLRL 597
L C H FH C+++WL L
Sbjct: 635 LGCGHEFHTACVKQWLML 652
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 462 IAEVLLALERIEQDEELTHEQILLLETNLFLSGLN--FDHHRDMRLDIDXXXXXXXXXXX 519
I+E+ L + + E L E ++ + L G+ D HR+MRLD+D
Sbjct: 557 ISEIRQVLHAMRRGENLRVEDYMVFDP-LIYQGMTDMHDRHREMRLDVDNMSYEELLALG 615
Query: 520 XKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYNEDKDDIKCCICQEEYIVADEVGT 579
++G VST L+EE + +K+ T + ++ CCICQEEY+ D +GT
Sbjct: 616 ERIGDVSTGLSEEVILKAMKQHKH----TSSSPSSVELHQNIEPCCICQEEYVEGDNLGT 671
Query: 580 LQCEHIFHVVCIQEWLRL 597
L+C H FH CI++W+ +
Sbjct: 672 LKCGHEFHKDCIKQWVMI 689
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 462 IAEVLLALERIEQDEELTHEQILLLETNLFLSGLN--FDHHRDMRLDIDXXXXXXXXXXX 519
I+E+ L + + E L E ++ + L G+ D HR+MRLD+D
Sbjct: 557 ISEIRQVLHAMRRGENLRVEDYMVFDP-LIYQGMTDMHDRHREMRLDVDNMSYEELLALG 615
Query: 520 XKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYNEDKDDIKCCICQEEYIVADEVGT 579
++G VST L+EE + +K+ T + ++ CCICQEEY+ D +GT
Sbjct: 616 ERIGDVSTGLSEEVILKAMKQHKH----TSSSPSSVELHQNIEPCCICQEEYVEGDNLGT 671
Query: 580 LQCEHIFHVVCIQEWLRL 597
L+C H FH CI++W+ +
Sbjct: 672 LKCGHEFHKDCIKQWVMI 689
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 462 IAEVLLALERIEQDEELTHEQILLLETNLFLSGLN--FDHHRDMRLDIDXXXXXXXXXXX 519
I+E+ L + + E L E ++ + L G+ D HR+MRLD+D
Sbjct: 557 ISEIRQVLHAMRRGENLRVEDYMVFDP-LIYQGMTDMHDRHREMRLDVDNMSYEELLALG 615
Query: 520 XKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYNEDKDDIKCCICQEEYIVADEVGT 579
++G VST L+EE + +K+ T + ++ CCICQEEY+ D +GT
Sbjct: 616 ERIGDVSTGLSEEVILKAMKQHKH----TSSSPSSVELHQNIEPCCICQEEYVEGDNLGT 671
Query: 580 LQCEHIFHVVCIQEWLRL 597
L+C H FH CI++W+ +
Sbjct: 672 LKCGHEFHKDCIKQWVMI 689
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 462 IAEVLLALERIEQDEELTHEQILLLETNLFLSGLN--FDHHRDMRLDIDXXXXXXXXXXX 519
I+E+ L + + E L E ++ + L G+ D HR+MRLD+D
Sbjct: 557 ISEIRQVLHAMRRGENLRVEDYMVFDP-LIYQGMTDMHDRHREMRLDVDNMSYEELLALG 615
Query: 520 XKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYNEDKDDIKCCICQEEYIVADEVGT 579
++G VST L+EE + +K+ T + ++ CCICQEEY+ D +GT
Sbjct: 616 ERIGDVSTGLSEEVILKAMKQHKH----TSSSPSSVELHQNIEPCCICQEEYVEGDNLGT 671
Query: 580 LQCEHIFHVVCIQEWLRL 597
L+C H FH CI++W+ +
Sbjct: 672 LKCGHEFHKDCIKQWVMI 689
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 482 QILLLETNLFLSGL--NFDHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLK 539
++++++ + G+ +FD RDMRL++D ++G V+T LTE+ + +CL+
Sbjct: 244 EMMMMQNGFVMGGVLSSFDQFRDMRLNVDNMTYEQLLELGERIGHVNTGLTEKQIKSCLR 303
Query: 540 RSIFEPGPTEEAAEDYNEDKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQEWL 595
+ +P + D KC ICQ+EY DEVG L+C H FH+ C+ +WL
Sbjct: 304 K--VKPCRQDTTVADR-------KCIICQDEYEAKDEVGELRCGHRFHIDCVNQWL 350
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 18/167 (10%)
Query: 439 VSPAEYSTALTSQDRFRRYNI----DGIAEVLLALERIEQDEELTHEQILLLETNLFLSG 494
+ PA YS Q R N D + +L + + + E F +
Sbjct: 301 LHPASYSHMGQVQSTGFRINQYPGEDFVPAAILRHRELPHFRAMPANENAFWEVGDFYNA 360
Query: 495 LNF-DHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSI-----FEPGPT 548
+N+ DHH+DMRLDI+ ++GTV T L+ E + LKR E GP+
Sbjct: 361 VNYVDHHQDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPS 420
Query: 549 EEAAEDYNEDKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQEWL 595
+ D C ICQE Y D++ TL C H +H C+++WL
Sbjct: 421 TDLETD--------SCTICQENYKNEDKIATLDCMHKYHAECLKKWL 459
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 18/167 (10%)
Query: 439 VSPAEYSTALTSQDRFRRYNI----DGIAEVLLALERIEQDEELTHEQILLLETNLFLSG 494
+ PA YS Q R N D + +L + + + E F +
Sbjct: 301 LHPASYSHMGQVQSTGFRINQYPGEDFVPAAILRHRELPHFRAMPANENAFWEVGDFYNA 360
Query: 495 LNF-DHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSI-----FEPGPT 548
+N+ DHH+DMRLDI+ ++GTV T L+ E + LKR E GP+
Sbjct: 361 VNYVDHHQDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPS 420
Query: 549 EEAAEDYNEDKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQEWL 595
+ D C ICQE Y D++ TL C H +H C+++WL
Sbjct: 421 TDLETD--------SCTICQENYKNEDKIATLDCMHKYHAECLKKWL 459
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 447 ALTSQDRFRRYNIDGIAEVLLALERIEQDEELTHEQILLLETNLFLSGLNF-DHHRDMRL 505
A TS+ R R G +E+ LE + + L E ++LL ++ L + D +RDMRL
Sbjct: 486 ASTSRGRTRM----GASEIRNILEHMRRAGNLRLEDVMLLNQSIMLGAADIHDRYRDMRL 541
Query: 506 DIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYNEDKDDIKCC 565
D+D ++G V T L EE +S LK+ ++ ++ CC
Sbjct: 542 DVDNMTYEELLSLEERIGDVCTGLNEETISNRLKQQKYK--------SSTRSSQEVEPCC 593
Query: 566 ICQEEYIVADEVGTLQCEHIFHVVCIQEWLR 596
+CQEEY +E+G L+C H FH CI+EWL+
Sbjct: 594 VCQEEYKEEEEIGRLECGHDFHSQCIKEWLK 624
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 481 EQILLLETNLFLSGL---NFDHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSAC 537
+++ LLE FL G + DHHRDMRLDI+ ++GTV+T L EE +
Sbjct: 355 DEVALLEFGDFLGGSGNNHIDHHRDMRLDIEEMSYEELLALSERIGTVNTGLPEEDVKNH 414
Query: 538 LKRSI-----FEPGPTEEAAEDYNEDKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQ 592
LK FE +E++ +D + C ICQE + +++ TL C H +H C++
Sbjct: 415 LKTRTCSGINFE----KESSSPRTKDLETEPCTICQESFKNEEKIATLDCGHEYHAECLE 470
Query: 593 EWL 595
+WL
Sbjct: 471 KWL 473
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 481 EQILLLETNLFLSGL---NFDHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSAC 537
+++ LLE FL G + DHHRDMRLDI+ ++GTV+T L EE +
Sbjct: 355 DEVALLEFGDFLGGSGNNHIDHHRDMRLDIEEMSYEELLALSERIGTVNTGLPEEDVKNH 414
Query: 538 LKRSI-----FEPGPTEEAAEDYNEDKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQ 592
LK FE +E++ +D + C ICQE + +++ TL C H +H C++
Sbjct: 415 LKTRTCSGINFE----KESSSPRTKDLETEPCTICQESFKNEEKIATLDCGHEYHAECLE 470
Query: 593 EWL 595
+WL
Sbjct: 471 KWL 473
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 498 DHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYNE 557
D++ ++RLD+D ++G V+T L E + CL + +P +
Sbjct: 264 DNYHELRLDVDSMSYEQLLELGDRIGYVNTGLKESEIHRCLGK--IKPSVSHTLV----- 316
Query: 558 DKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQEWL 595
D KC ICQ+EY DEVG L C H FHV C+++WL
Sbjct: 317 ---DRKCSICQDEYEREDEVGELNCGHSFHVHCVKQWL 351
>AT2G37150.2 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Query: 497 FDHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYN 556
DHHRDMRLDID ++G+V+T L++ A+S+CL +++ P
Sbjct: 434 LDHHRDMRLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPS---------Y 484
Query: 557 EDKDDIKCCICQEEYIVADEVGTLQ-CEHIFHVVCIQEWLRL 597
+ ++ KC IC EEY +E+G ++ C H +H CI++WL +
Sbjct: 485 QTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSM 526
>AT2G37150.1 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Query: 497 FDHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYN 556
DHHRDMRLDID ++G+V+T L++ A+S+CL +++ P
Sbjct: 434 LDHHRDMRLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPS---------Y 484
Query: 557 EDKDDIKCCICQEEYIVADEVGTLQ-CEHIFHVVCIQEWLRL 597
+ ++ KC IC EEY +E+G ++ C H +H CI++WL +
Sbjct: 485 QTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSM 526
>AT2G37150.3 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15607600 REVERSE LENGTH=599
Length = 599
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Query: 497 FDHHRDMRLDIDXXXXXXXXXXXXKMGTVSTTLTEEALSACLKRSIFEPGPTEEAAEDYN 556
DHHRDMRLDID ++G+V+T L++ A+S+CL +++ P
Sbjct: 487 LDHHRDMRLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPS---------Y 537
Query: 557 EDKDDIKCCICQEEYIVADEVGTLQ-CEHIFHVVCIQEWLRL 597
+ ++ KC IC EEY +E+G ++ C H +H CI++WL +
Sbjct: 538 QTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSM 579
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 536 ACLKRSIFEPGPTEEAAEDYNEDKDDIKCCICQEEYIVADEVGTLQCEHIFHVVCIQEWL 595
+C+ R + + PTE + E + C IC ++Y V +++ L C+H +H VCI WL
Sbjct: 205 SCMPRDLLQSMPTEVYSGVLEESSTSVTCAICIDDYCVGEKLRILPCKHKYHAVCIDSWL 264