Miyakogusa Predicted Gene

Lj0g3v0129059.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129059.2 tr|Q93WZ7|Q93WZ7_PHAVU NADH glutamate synthase
(Precursor) OS=Phaseolus vulgaris PE=2 SV=2,92.26,0,Alpha subunit of
glutamate synthase, C-terminal domain,Glutamate synthase, alpha
subunit, C-terminal,CUFF.7971.2
         (440 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53460.3 | Symbols: GLT1 | NADH-dependent glutamate synthase ...   631   0.0  
AT5G53460.2 | Symbols: GLT1 | NADH-dependent glutamate synthase ...   631   0.0  
AT5G53460.1 | Symbols: GLT1 | NADH-dependent glutamate synthase ...   631   0.0  
AT2G41220.1 | Symbols: GLU2 | glutamate synthase 2 | chr2:171779...   235   4e-62
AT5G04140.2 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate sy...   229   2e-60
AT5G04140.1 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate sy...   229   2e-60

>AT5G53460.3 | Symbols: GLT1 | NADH-dependent glutamate synthase 1 |
            chr5:21700518-21709629 FORWARD LENGTH=2208
          Length = 2208

 Score =  631 bits (1627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/442 (70%), Positives = 343/442 (77%), Gaps = 3/442 (0%)

Query: 1    MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMAQLGFRTVNEMVG 60
            MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFM+AEE+REIM+ LGFRTV EM+G
Sbjct: 1266 MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEEVREIMSGLGFRTVTEMIG 1325

Query: 61   HSDMLEVDKEVVKSNEKLENIDLSLLLRPAAELRPEAAQYCVQKQDHSLDMALDNQLISL 120
             +DMLE+D+EVVK+N+KLENIDLSLLLRPAAE+RP AAQYCVQKQDH LDMALD +LI+L
Sbjct: 1326 RADMLELDREVVKNNDKLENIDLSLLLRPAAEIRPGAAQYCVQKQDHGLDMALDQELIAL 1385

Query: 121  SSAALEKGLPVYIETPIYNVNRAVGTMLSHEVTKRYHLAGLPTDTIHIKFNGSAGQSFGA 180
            S +ALEK LPVYIETPI NVNRAVGTMLSHEVTKRYHL GLP DTIHIKF GSAGQS GA
Sbjct: 1386 SKSALEKSLPVYIETPICNVNRAVGTMLSHEVTKRYHLTGLPKDTIHIKFTGSAGQSLGA 1445

Query: 181  FLCPGITLELEGDSNDYXXXXXXXXXXXXYPPKGSNFDPKENIVIGNVALYGATRGEAYF 240
            FLCPGI LELEGDSNDY            YPPKGS+FDPKENIVIGNVALYGAT GEAYF
Sbjct: 1446 FLCPGIMLELEGDSNDYVGKGLSGGKVVVYPPKGSSFDPKENIVIGNVALYGATSGEAYF 1505

Query: 241  NGMAAERFCVRNSGAKAVVEGVGDHGCEYMXXXXXXXXXXXXRNFAAGMSGGIAYVLNAD 300
            NGMAAERF VRNSGAKAVVEG+GDHGCEYM            RNFAAGMSGGIAYVL+ D
Sbjct: 1506 NGMAAERFSVRNSGAKAVVEGLGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVD 1565

Query: 301  GKFQSRCNXXXXXXXXXXXXXXXXTLKMLIQQHQRHTNSLLAKEVLDNFGNLLPKFVKVI 360
            GKF +RCN                TLKM+IQQHQRHTNS LA+EVL +F NLLPKF+KV 
Sbjct: 1566 GKFNTRCNLELVDLDKVEDEEDKMTLKMMIQQHQRHTNSQLAQEVLADFENLLPKFIKVF 1625

Query: 361  PREYKRVLASMKSEEASKDAVERTXXXXXXXXXXXXXXXXXXFEELKKLATASLKEKQS- 419
            PR+YKRVL++MK EE SK A+ER                   F ELK +A AS KE+ S 
Sbjct: 1626 PRDYKRVLSAMKHEEVSKQAIERA-SEEADETEEKELEEKDAFAELKNMAAASSKEEMSG 1684

Query: 420  -EAESPKRPSQVTEAIKHRGFV 440
                +  RPS+V  A+K+ GF+
Sbjct: 1685 NGVAAEARPSKVDNAVKNGGFI 1706


>AT5G53460.2 | Symbols: GLT1 | NADH-dependent glutamate synthase 1 |
            chr5:21700518-21709629 FORWARD LENGTH=2208
          Length = 2208

 Score =  631 bits (1627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/442 (70%), Positives = 343/442 (77%), Gaps = 3/442 (0%)

Query: 1    MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMAQLGFRTVNEMVG 60
            MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFM+AEE+REIM+ LGFRTV EM+G
Sbjct: 1266 MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEEVREIMSGLGFRTVTEMIG 1325

Query: 61   HSDMLEVDKEVVKSNEKLENIDLSLLLRPAAELRPEAAQYCVQKQDHSLDMALDNQLISL 120
             +DMLE+D+EVVK+N+KLENIDLSLLLRPAAE+RP AAQYCVQKQDH LDMALD +LI+L
Sbjct: 1326 RADMLELDREVVKNNDKLENIDLSLLLRPAAEIRPGAAQYCVQKQDHGLDMALDQELIAL 1385

Query: 121  SSAALEKGLPVYIETPIYNVNRAVGTMLSHEVTKRYHLAGLPTDTIHIKFNGSAGQSFGA 180
            S +ALEK LPVYIETPI NVNRAVGTMLSHEVTKRYHL GLP DTIHIKF GSAGQS GA
Sbjct: 1386 SKSALEKSLPVYIETPICNVNRAVGTMLSHEVTKRYHLTGLPKDTIHIKFTGSAGQSLGA 1445

Query: 181  FLCPGITLELEGDSNDYXXXXXXXXXXXXYPPKGSNFDPKENIVIGNVALYGATRGEAYF 240
            FLCPGI LELEGDSNDY            YPPKGS+FDPKENIVIGNVALYGAT GEAYF
Sbjct: 1446 FLCPGIMLELEGDSNDYVGKGLSGGKVVVYPPKGSSFDPKENIVIGNVALYGATSGEAYF 1505

Query: 241  NGMAAERFCVRNSGAKAVVEGVGDHGCEYMXXXXXXXXXXXXRNFAAGMSGGIAYVLNAD 300
            NGMAAERF VRNSGAKAVVEG+GDHGCEYM            RNFAAGMSGGIAYVL+ D
Sbjct: 1506 NGMAAERFSVRNSGAKAVVEGLGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVD 1565

Query: 301  GKFQSRCNXXXXXXXXXXXXXXXXTLKMLIQQHQRHTNSLLAKEVLDNFGNLLPKFVKVI 360
            GKF +RCN                TLKM+IQQHQRHTNS LA+EVL +F NLLPKF+KV 
Sbjct: 1566 GKFNTRCNLELVDLDKVEDEEDKMTLKMMIQQHQRHTNSQLAQEVLADFENLLPKFIKVF 1625

Query: 361  PREYKRVLASMKSEEASKDAVERTXXXXXXXXXXXXXXXXXXFEELKKLATASLKEKQS- 419
            PR+YKRVL++MK EE SK A+ER                   F ELK +A AS KE+ S 
Sbjct: 1626 PRDYKRVLSAMKHEEVSKQAIERA-SEEADETEEKELEEKDAFAELKNMAAASSKEEMSG 1684

Query: 420  -EAESPKRPSQVTEAIKHRGFV 440
                +  RPS+V  A+K+ GF+
Sbjct: 1685 NGVAAEARPSKVDNAVKNGGFI 1706


>AT5G53460.1 | Symbols: GLT1 | NADH-dependent glutamate synthase 1 |
            chr5:21700518-21709629 FORWARD LENGTH=2208
          Length = 2208

 Score =  631 bits (1627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/442 (70%), Positives = 343/442 (77%), Gaps = 3/442 (0%)

Query: 1    MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMAQLGFRTVNEMVG 60
            MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFM+AEE+REIM+ LGFRTV EM+G
Sbjct: 1266 MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEEVREIMSGLGFRTVTEMIG 1325

Query: 61   HSDMLEVDKEVVKSNEKLENIDLSLLLRPAAELRPEAAQYCVQKQDHSLDMALDNQLISL 120
             +DMLE+D+EVVK+N+KLENIDLSLLLRPAAE+RP AAQYCVQKQDH LDMALD +LI+L
Sbjct: 1326 RADMLELDREVVKNNDKLENIDLSLLLRPAAEIRPGAAQYCVQKQDHGLDMALDQELIAL 1385

Query: 121  SSAALEKGLPVYIETPIYNVNRAVGTMLSHEVTKRYHLAGLPTDTIHIKFNGSAGQSFGA 180
            S +ALEK LPVYIETPI NVNRAVGTMLSHEVTKRYHL GLP DTIHIKF GSAGQS GA
Sbjct: 1386 SKSALEKSLPVYIETPICNVNRAVGTMLSHEVTKRYHLTGLPKDTIHIKFTGSAGQSLGA 1445

Query: 181  FLCPGITLELEGDSNDYXXXXXXXXXXXXYPPKGSNFDPKENIVIGNVALYGATRGEAYF 240
            FLCPGI LELEGDSNDY            YPPKGS+FDPKENIVIGNVALYGAT GEAYF
Sbjct: 1446 FLCPGIMLELEGDSNDYVGKGLSGGKVVVYPPKGSSFDPKENIVIGNVALYGATSGEAYF 1505

Query: 241  NGMAAERFCVRNSGAKAVVEGVGDHGCEYMXXXXXXXXXXXXRNFAAGMSGGIAYVLNAD 300
            NGMAAERF VRNSGAKAVVEG+GDHGCEYM            RNFAAGMSGGIAYVL+ D
Sbjct: 1506 NGMAAERFSVRNSGAKAVVEGLGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVD 1565

Query: 301  GKFQSRCNXXXXXXXXXXXXXXXXTLKMLIQQHQRHTNSLLAKEVLDNFGNLLPKFVKVI 360
            GKF +RCN                TLKM+IQQHQRHTNS LA+EVL +F NLLPKF+KV 
Sbjct: 1566 GKFNTRCNLELVDLDKVEDEEDKMTLKMMIQQHQRHTNSQLAQEVLADFENLLPKFIKVF 1625

Query: 361  PREYKRVLASMKSEEASKDAVERTXXXXXXXXXXXXXXXXXXFEELKKLATASLKEKQS- 419
            PR+YKRVL++MK EE SK A+ER                   F ELK +A AS KE+ S 
Sbjct: 1626 PRDYKRVLSAMKHEEVSKQAIERA-SEEADETEEKELEEKDAFAELKNMAAASSKEEMSG 1684

Query: 420  -EAESPKRPSQVTEAIKHRGFV 440
                +  RPS+V  A+K+ GF+
Sbjct: 1685 NGVAAEARPSKVDNAVKNGGFI 1706


>AT2G41220.1 | Symbols: GLU2 | glutamate synthase 2 |
            chr2:17177934-17188388 FORWARD LENGTH=1629
          Length = 1629

 Score =  235 bits (600), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 133/365 (36%), Positives = 196/365 (53%), Gaps = 12/365 (3%)

Query: 1    MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMAQLGFRTVNEMVG 60
            M R CH N CPVG+A+Q   LR +F G P  ++NFF  +AEE+R I+AQLG+  +++++G
Sbjct: 1241 MARICHTNNCPVGVASQREELRARFPGLPGDLVNFFLYIAEEVRGILAQLGYEKLDDIIG 1300

Query: 61   HSDMLEV-DKEVVKSNEKLENIDLSLLLRPAAELRPEAAQYCVQKQD-HSLDMALDNQLI 118
             +D+L+  D  +VK++     +DLS LL       P+ +   ++KQ+ HS    LD+ L+
Sbjct: 1301 RTDLLKARDISLVKTH-----LDLSYLLSSVG--LPKRSSTSIRKQEVHSNGPVLDDTLL 1353

Query: 119  SLSSA--ALEKGLPVYIETPIYNVNRAVGTMLSHEVTKRYHLAGLPTDTIHIKFNGSAGQ 176
                   A+E    V+    IYNV+R+V   ++  + K+Y   G     +++ F GSAGQ
Sbjct: 1354 QDPEIMDAIENEKTVHKTMSIYNVDRSVCGRIAGVIAKKYGDTGF-AGQLNLTFTGSAGQ 1412

Query: 177  SFGAFLCPGITLELEGDSNDYXXXXXXXXXXXXYPPKGSNFDPKENIVIGNVALYGATRG 236
            SF  FL PG+ + L G++NDY             P + + F P++  ++GN  LYGAT G
Sbjct: 1413 SFACFLTPGMNIRLVGEANDYVGKGMAGGEVVILPVESTGFRPEDATIVGNTCLYGATGG 1472

Query: 237  EAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMXXXXXXXXXXXXRNFAAGMSGGIAYV 296
              +  G A ERF VRNS A+AVVEG GDH CEYM            RN AAGM+GG+AY+
Sbjct: 1473 LLFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYI 1532

Query: 297  LNADGKFQSRCNXXXXXXXXXXXXXXXXTLKMLIQQHQRHTNSLLAKEVLDNFGNLLPKF 356
            L+ D     + N                 LK LIQ H   T S     +++ +   L  F
Sbjct: 1533 LDEDNTLLPKMNKEIVKIQRVTSPVGQTQLKSLIQAHVEKTGSSKGAMIVEEWDKYLAMF 1592

Query: 357  VKVIP 361
             +++P
Sbjct: 1593 WQLVP 1597


>AT5G04140.2 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate
            synthase 1 | chr5:1130031-1138186 FORWARD LENGTH=1648
          Length = 1648

 Score =  229 bits (585), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/365 (36%), Positives = 197/365 (53%), Gaps = 11/365 (3%)

Query: 1    MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMAQLGFRTVNEMVG 60
            M R CH N CPVG+A+Q   LR +F G P  ++N+F  VAEE+R I+AQLG+ ++++++G
Sbjct: 1265 MARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLYVAEEVRGILAQLGYNSLDDIIG 1324

Query: 61   HSDMLEV-DKEVVKSNEKLENIDLSLLLRPAAELRPEAAQYCVQKQD-HSLDMALDNQLI 118
             +++L   D  +VK+    +++DLS LL       P  +   ++KQ+ H+    LD+ ++
Sbjct: 1325 RTELLRPRDISLVKT----QHLDLSYLLSSVGT--PSLSSTEIRKQEVHTNGPVLDDDIL 1378

Query: 119  S--LSSAALEKGLPVYIETPIYNVNRAVGTMLSHEVTKRYHLAGLPTDTIHIKFNGSAGQ 176
            +  L   A+E    V     I NV+RA    ++  + K+Y   G     +++ F GSAGQ
Sbjct: 1379 ADPLVIDAIENEKVVEKTVKICNVDRAACGRVAGVIAKKYGDTGF-AGQVNLTFLGSAGQ 1437

Query: 177  SFGAFLCPGITLELEGDSNDYXXXXXXXXXXXXYPPKGSNFDPKENIVIGNVALYGATRG 236
            SFG FL PG+ + L G+SNDY             P +   F P+E  ++GN  LYGAT G
Sbjct: 1438 SFGCFLIPGMNIRLIGESNDYVGKGMAGGEIVVTPVEKIGFVPEEATIVGNTCLYGATGG 1497

Query: 237  EAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMXXXXXXXXXXXXRNFAAGMSGGIAYV 296
            + +  G A ERF VRNS A+AVVEG GDH CEYM            RN AAGM+GG+AY+
Sbjct: 1498 QIFARGKAGERFAVRNSLAEAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYL 1557

Query: 297  LNADGKFQSRCNXXXXXXXXXXXXXXXXTLKMLIQQHQRHTNSLLAKEVLDNFGNLLPKF 356
            L+ D     + N                 LK LI+ H   T S     +L+ +   LP F
Sbjct: 1558 LDEDDTLLPKINREIVKIQRVTAPAGELQLKSLIEAHVEKTGSSKGATILNEWEKYLPLF 1617

Query: 357  VKVIP 361
             +++P
Sbjct: 1618 WQLVP 1622


>AT5G04140.1 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | glutamate
            synthase 1 | chr5:1130031-1138186 FORWARD LENGTH=1622
          Length = 1622

 Score =  229 bits (585), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/365 (36%), Positives = 197/365 (53%), Gaps = 11/365 (3%)

Query: 1    MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMAQLGFRTVNEMVG 60
            M R CH N CPVG+A+Q   LR +F G P  ++N+F  VAEE+R I+AQLG+ ++++++G
Sbjct: 1239 MARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLYVAEEVRGILAQLGYNSLDDIIG 1298

Query: 61   HSDMLEV-DKEVVKSNEKLENIDLSLLLRPAAELRPEAAQYCVQKQD-HSLDMALDNQLI 118
             +++L   D  +VK+    +++DLS LL       P  +   ++KQ+ H+    LD+ ++
Sbjct: 1299 RTELLRPRDISLVKT----QHLDLSYLLSSVGT--PSLSSTEIRKQEVHTNGPVLDDDIL 1352

Query: 119  S--LSSAALEKGLPVYIETPIYNVNRAVGTMLSHEVTKRYHLAGLPTDTIHIKFNGSAGQ 176
            +  L   A+E    V     I NV+RA    ++  + K+Y   G     +++ F GSAGQ
Sbjct: 1353 ADPLVIDAIENEKVVEKTVKICNVDRAACGRVAGVIAKKYGDTGF-AGQVNLTFLGSAGQ 1411

Query: 177  SFGAFLCPGITLELEGDSNDYXXXXXXXXXXXXYPPKGSNFDPKENIVIGNVALYGATRG 236
            SFG FL PG+ + L G+SNDY             P +   F P+E  ++GN  LYGAT G
Sbjct: 1412 SFGCFLIPGMNIRLIGESNDYVGKGMAGGEIVVTPVEKIGFVPEEATIVGNTCLYGATGG 1471

Query: 237  EAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMXXXXXXXXXXXXRNFAAGMSGGIAYV 296
            + +  G A ERF VRNS A+AVVEG GDH CEYM            RN AAGM+GG+AY+
Sbjct: 1472 QIFARGKAGERFAVRNSLAEAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYL 1531

Query: 297  LNADGKFQSRCNXXXXXXXXXXXXXXXXTLKMLIQQHQRHTNSLLAKEVLDNFGNLLPKF 356
            L+ D     + N                 LK LI+ H   T S     +L+ +   LP F
Sbjct: 1532 LDEDDTLLPKINREIVKIQRVTAPAGELQLKSLIEAHVEKTGSSKGATILNEWEKYLPLF 1591

Query: 357  VKVIP 361
             +++P
Sbjct: 1592 WQLVP 1596