Miyakogusa Predicted Gene

Lj0g3v0128989.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128989.1 tr|G7JIY5|G7JIY5_MEDTR L-lactate dehydrogenase
OS=Medicago truncatula GN=MTR_4g101130 PE=3 SV=1,90.16,0,LDH
C-terminal domain-like,Lactate dehydrogenase/glycoside hydrolase,
family 4, C-terminal; no descr,CUFF.7793.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17260.1 | Symbols:  | Lactate/malate dehydrogenase family pr...   182   5e-47

>AT4G17260.1 | Symbols:  | Lactate/malate dehydrogenase family
           protein | chr4:9674057-9675309 FORWARD LENGTH=353
          Length = 353

 Score =  182 bits (462), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 86/120 (71%), Positives = 104/120 (86%)

Query: 1   MSFLEKQQIAVEKETLENIHRTVIESAYEVISLKGYTSWAIGYSVASLARSILRDQRKID 60
           +SFLEK QIA EK+TLE+IH+ V+ SAYEVI LKGYTSWAIGYSVA+LAR+ILRDQRKI 
Sbjct: 232 LSFLEKNQIAYEKQTLEDIHQAVVGSAYEVIGLKGYTSWAIGYSVANLARTILRDQRKIH 291

Query: 61  PVSVLAKGFYGIGDAEVFLSLPAQLGRGGVLGVTNVHLNEEEEQRLRDSAKAILEVQSQL 120
           PV+VLA+GFYG+   +VFLSLPA LGR GV+ VTNVH+ +EE ++L+ SAK ILE+QSQL
Sbjct: 292 PVTVLARGFYGVDGGDVFLSLPALLGRNGVVAVTNVHMTDEEAEKLQKSAKTILEMQSQL 351