Miyakogusa Predicted Gene

Lj0g3v0128869.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128869.2 Non Chatacterized Hit- tr|K4CTX1|K4CTX1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,32.98,9e-17,
,CUFF.7777.2
         (181 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07060.1 | Symbols: emb1974 | NHL domain-containing protein |...    88   3e-18

>AT3G07060.1 | Symbols: emb1974 | NHL domain-containing protein |
           chr3:2232760-2236913 FORWARD LENGTH=774
          Length = 774

 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 7/112 (6%)

Query: 77  IDLLSFIKASLNEFEGTHHYWLNQSGKCKQIFEGDGIFLVLAARNFES----GNMFQKLK 132
           +DLLSFIKASL++ EG  H+WLN+    KQ+F+  G ++VLA    +        F+KLK
Sbjct: 84  VDLLSFIKASLDKLEGPSHHWLNRDFGNKQLFKDKGTYVVLAGHLLDGTSDLSGFFEKLK 143

Query: 133 MVQKRFPHINIMGLKVIHS---SAERVHLIQFLMTENITFPILLSERTFPQV 181
           ++Q+R P +  MG+        + +R  L + ++ E +TFP+LLSE+ FP+ 
Sbjct: 144 LLQQRSPGVCFMGIHFSDQARIADDRTALAELILKEYLTFPVLLSEKEFPKT 195