Miyakogusa Predicted Gene

Lj0g3v0128779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128779.1 tr|B9I2Z5|B9I2Z5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_661879 PE=4 SV=1,93.33,0,no
description,Calponin homology domain; Calponin-homology domain,
CH-domain,Calponin homology domai,CUFF.7770.1
         (121 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47690.1 | Symbols: ATEB1A, EB1A, ATEB1H2 | microtubule end b...   226   2e-60
AT5G62500.1 | Symbols: ATEB1B, ATEB1, EB1B | end binding protein...   221   1e-58
AT5G67270.1 | Symbols: ATEB1C, EB1C, ATEB1H1 | end binding prote...   219   3e-58

>AT3G47690.1 | Symbols: ATEB1A, EB1A, ATEB1H2 | microtubule end
           binding protein EB1A | chr3:17581353-17583346 FORWARD
           LENGTH=276
          Length = 276

 Score =  226 bits (576), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 102/121 (84%), Positives = 113/121 (93%)

Query: 1   MASNIGMMDSAYFVGRNEILSWINNRLQLNLSRIEEAASGDVQCQMMDMTHPGVVPMHKV 60
           MA+NIGMMDSAYFVGRNEIL+WIN+RL LNLSR+EEAASG VQCQM+DMT PGVVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKTEYDKIQNYKILQDVFNKLKIDKHIEVSRLVKGRPLDNLEFLQWLKHYCDSVNGG 120
           NFDAK EYD IQNYK+LQDVFNKLKI K +E++RLVKGRPLDNLEFLQWLK +CDS+NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 I 121
           I
Sbjct: 121 I 121


>AT5G62500.1 | Symbols: ATEB1B, ATEB1, EB1B | end binding protein 1B
           | chr5:25092929-25095006 FORWARD LENGTH=293
          Length = 293

 Score =  221 bits (562), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 100/121 (82%), Positives = 112/121 (92%)

Query: 1   MASNIGMMDSAYFVGRNEILSWINNRLQLNLSRIEEAASGDVQCQMMDMTHPGVVPMHKV 60
           MA+NIGMMDSAYFVGRNEILSWIN+RL LNLSRIEEAASG VQCQM+DMT PGVVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKTEYDKIQNYKILQDVFNKLKIDKHIEVSRLVKGRPLDNLEFLQWLKHYCDSVNGG 120
           NF+AK EY+ IQNYK++Q+VF KLKI K +EV+RLVKGRPLDNLEFLQWLK +CDS+NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 I 121
           I
Sbjct: 121 I 121


>AT5G67270.1 | Symbols: ATEB1C, EB1C, ATEB1H1 | end binding protein
           1C | chr5:26840248-26841984 REVERSE LENGTH=329
          Length = 329

 Score =  219 bits (559), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 97/120 (80%), Positives = 110/120 (91%)

Query: 1   MASNIGMMDSAYFVGRNEILSWINNRLQLNLSRIEEAASGDVQCQMMDMTHPGVVPMHKV 60
           MA+NIGMMDSAYFVGR+EIL+WIN+ LQLNLS++EEA SG V CQ+MD  HPG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  NFDAKTEYDKIQNYKILQDVFNKLKIDKHIEVSRLVKGRPLDNLEFLQWLKHYCDSVNGG 120
           NFDAK+EY+ IQNYK+LQDVFNKLKI KHIEVS+LVKGRPLDNLEF+QW+K YCDSVNGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120