Miyakogusa Predicted Gene

Lj0g3v0128589.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128589.3 tr|G7I4W5|G7I4W5_MEDTR Zinc finger CCCH
domain-containing protein OS=Medicago truncatula
GN=MTR_1g07,37.71,5e-18,P-loop containing nucleoside triphosphate
hydrolases,NULL; no description,NULL; AAA_2,ATPase, AAA-2;,CUFF.7751.3
         (512 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G29970.1 | Symbols:  | Double Clp-N motif-containing P-loop n...   256   2e-68
AT1G07200.1 | Symbols:  | Double Clp-N motif-containing P-loop n...   226   4e-59
AT1G07200.2 | Symbols:  | Double Clp-N motif-containing P-loop n...   225   6e-59
AT2G40130.2 | Symbols:  | Double Clp-N motif-containing P-loop n...   180   2e-45
AT5G57710.1 | Symbols:  | Double Clp-N motif-containing P-loop n...   135   5e-32
AT4G30350.1 | Symbols:  | Double Clp-N motif-containing P-loop n...   119   3e-27
AT3G52490.1 | Symbols:  | Double Clp-N motif-containing P-loop n...    57   3e-08

>AT2G29970.1 | Symbols:  | Double Clp-N motif-containing P-loop
            nucleoside triphosphate hydrolases superfamily protein |
            chr2:12776601-12779784 FORWARD LENGTH=1002
          Length = 1002

 Score =  256 bits (655), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 181/496 (36%), Positives = 269/496 (54%), Gaps = 78/496 (15%)

Query: 27   STWVSSLTPVTTELVLGTKYSSAAHEPDTPKGSDHRMHPQHLSDSLSTDFDAMNESASHQ 86
            ST  S L+ VTT+L LGT Y+S   EP TP   + R            DF+ + E     
Sbjct: 573  STTNSPLSFVTTDLGLGTIYASKNQEPSTPVSVERR------------DFEVIKEK--QL 618

Query: 87   IARSSSCSGPHLEGKFETVDFKSLYQHIIEKVGRQDKAIYDITRTISLCRSGVGKRSGSH 146
            ++ S  C            DFKSL + +  KVG Q++A+  I+  +   R    +R  +H
Sbjct: 619  LSASRYCK-----------DFKSLRELLSRKVGFQNEAVNAISEIVCGYRDE-SRRRNNH 666

Query: 147  V--RRDVWLAFLGPDRLGKRKIASALAEILFQNRQSVITVDLSFQESPYQSNSTFEFQNS 204
            V    +VWLA LGPD+ GK+K+A ALAE+    + + I VD   Q+S             
Sbjct: 667  VATTSNVWLALLGPDKAGKKKVALALAEVFCGGQDNFICVDFKSQDS------------- 713

Query: 205  CCHDVLRRKIVVDYIAGELSKKPHSVVFLENIDKADFLVQSSLFQAIRTGKFPYSLGREI 264
               D  R K VVDYIAGE++++  SVVF+EN++KA+F  Q  L +A+RTGK   S GREI
Sbjct: 714  -LDDRFRGKTVVDYIAGEVARRADSVVFIENVEKAEFPDQIRLSEAMRTGKLRDSHGREI 772

Query: 265  -----IVTSTVFKGNGS--FHLAEEPKMFPEERILEAKRFQIQLSLGHASEDARRSGSKN 317
                 IV +T+   + +   H+ EEP  + EER+L AK + +Q+ L   S +  ++G   
Sbjct: 773  SMKNVIVVATISGSDKASDCHVLEEPVKYSEERVLNAKNWTLQIKLADTS-NVNKNGP-- 829

Query: 318  VKVAQRKGSFKATFLNKRKRSEGNDSKCKTQKQVREASRSYLDLNMPLEEVDEDNNDSDC 377
                           NKR++ E       T+ +  ++ RS+LDLN+P++E+ E N D   
Sbjct: 830  ---------------NKRRQEEAETEV--TELRALKSQRSFLDLNLPVDEI-EANED--- 868

Query: 378  ENQSMVENSEAWLSDFCDQIDGEVVFKPFNFDSLAEQVIECVETRFQRTFGSEFLLEIDY 437
            E  +M EN+EAWL DF +Q+DG+V FK  +FD LA+ +   + + F  +FG E  LEI+ 
Sbjct: 869  EAYTMSENTEAWLEDFVEQVDGKVTFKLIDFDELAKNIKRNILSLFHLSFGPETHLEIEN 928

Query: 438  EVMAQILAAA-WLSDKKKSVEDWIEHVVGRSFAEARQKYHHHHPAAEYVMKLVNCESIFV 496
            +V+ +ILAA  W SD++K+ + W++ V+  SFA+ARQK     PAA + +KLV       
Sbjct: 929  DVILKILAALRWSSDEEKTFDQWLQTVLAPSFAKARQKC---VPAAPFSVKLVASRESPA 985

Query: 497  EEQALGV-CLPARINL 511
            EE+  G+   PAR+ +
Sbjct: 986  EEETTGIQQFPARVEV 1001


>AT1G07200.1 | Symbols:  | Double Clp-N motif-containing P-loop
           nucleoside triphosphate hydrolases superfamily protein |
           chr1:2209033-2210301 REVERSE LENGTH=422
          Length = 422

 Score =  226 bits (575), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 166/492 (33%), Positives = 255/492 (51%), Gaps = 101/492 (20%)

Query: 33  LTPVTTELVLGTKYSSAAHEPDTPKGSDHRMHPQHLSDSLSTDFDAMNESASHQIARSSS 92
           L+ VTT+  LG  Y+S   E  T      R  P  ++         +N S  H   +   
Sbjct: 17  LSCVTTDFGLGVIYASKNQESKTT-----REKPMLVT---------LNSSLEHTYQK--- 59

Query: 93  CSGPHLEGKFETVDFKSLYQHIIEKVGRQDKAIYDITRTISLCRSGVGKRSGSHVRRDVW 152
                        DFKSL + +  KV  Q +A+  I++ I  C++   +R+ +     +W
Sbjct: 60  -------------DFKSLREILSRKVAWQTEAVNAISQIICGCKTDSTRRNQAS---GIW 103

Query: 153 LAFLGPDRLGKRKIASALAEILFQNRQSVITVDLSFQESPYQSNSTFEFQNSCCHDVLRR 212
           LA LGPD++GK+K+A  L+E+ F  + + I VD             F  ++    D  R 
Sbjct: 104 LALLGPDKVGKKKVAMTLSEVFFGGKVNYICVD-------------FGAEHCSLDDKFRG 150

Query: 213 KIVVDYIAGELSKKPHSVVFLENIDKADFLVQSSLFQAIRTGKFPYSLGREI-------I 265
           K VVDY+ GELS+KPHSVV LEN++KA+F  Q  L +A+ TGK     GR I       +
Sbjct: 151 KTVVDYVTGELSRKPHSVVLLENVEKAEFPDQMRLSEAVSTGKIRDLHGRVISMKNVIVV 210

Query: 266 VTSTVFKGNGSFHLAEEPKMFPEERILEAKRFQIQLSLGHASEDARRSGSKNVKVAQRKG 325
           VTS + K N + H+ + P  FPEE++L A+ +++Q+ LG    DA + G           
Sbjct: 211 VTSGIAKDNATDHVIK-PVKFPEEQVLSARSWKLQIKLG----DATKFG----------- 254

Query: 326 SFKATFLNKRKRSEGNDSKCKTQKQVREASRSYLDLNMPLEEVDEDNNDSDCENQSMVEN 385
                 +NKRK       + +T ++  +  RSYLDLN+P+       N+++       E+
Sbjct: 255 ------VNKRKY------ELETAQRAVKVQRSYLDLNLPV-------NETEFSPDHEAED 295

Query: 386 SEAWLSDFCDQIDGEVVFKPFNFDSLAEQVIECVETRFQRTFGSEFLLEIDYEVMAQILA 445
            +AW  +F +++DG+V FKP +FD LA+ + E + + F+R FGSE  LE+D EV+ QILA
Sbjct: 296 RDAWFDEFIEKVDGKVTFKPVDFDELAKNIQEKIGSHFERCFGSETHLELDKEVILQILA 355

Query: 446 AAWLS------DKKKSVEDWIEHVVGRSFAEARQKYHHHHPAAEYVMKLVNCESIFVEEQ 499
           A+W S      + +  V+ W++ V+ RSFAEA+QKY  +       +KLV   S      
Sbjct: 356 ASWSSLSSGEEEGRTIVDQWMQTVLARSFAEAKQKYGSNPMLG---VKLVASSSGL---- 408

Query: 500 ALGVCLPARINL 511
           A GV LPA++++
Sbjct: 409 ASGVELPAKVDV 420


>AT1G07200.2 | Symbols:  | Double Clp-N motif-containing P-loop
           nucleoside triphosphate hydrolases superfamily protein |
           chr1:2209033-2212316 REVERSE LENGTH=979
          Length = 979

 Score =  225 bits (573), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 168/492 (34%), Positives = 257/492 (52%), Gaps = 101/492 (20%)

Query: 33  LTPVTTELVLGTKYSSAAHEPDTPKGSDHRMHPQHLSDSLSTDFDAMNESASHQIARSSS 92
           L+ VTT+  LG  Y+S   E  T      R  P  ++         +N S  H   +   
Sbjct: 574 LSCVTTDFGLGVIYASKNQESKT-----TREKPMLVT---------LNSSLEHTYQK--- 616

Query: 93  CSGPHLEGKFETVDFKSLYQHIIEKVGRQDKAIYDITRTISLCRSGVGKRSGSHVRRDVW 152
                        DFKSL + +  KV  Q +A+  I++ I  C++   +R+ +     +W
Sbjct: 617 -------------DFKSLREILSRKVAWQTEAVNAISQIICGCKTDSTRRNQAS---GIW 660

Query: 153 LAFLGPDRLGKRKIASALAEILFQNRQSVITVDLSFQESPYQSNSTFEFQNSCCHDVLRR 212
           LA LGPD++GK+K+A  L+E+ F  + + I VD             F  ++    D  R 
Sbjct: 661 LALLGPDKVGKKKVAMTLSEVFFGGKVNYICVD-------------FGAEHCSLDDKFRG 707

Query: 213 KIVVDYIAGELSKKPHSVVFLENIDKADFLVQSSLFQAIRTGKFPYSLGREI-------I 265
           K VVDY+ GELS+KPHSVV LEN++KA+F  Q  L +A+ TGK     GR I       +
Sbjct: 708 KTVVDYVTGELSRKPHSVVLLENVEKAEFPDQMRLSEAVSTGKIRDLHGRVISMKNVIVV 767

Query: 266 VTSTVFKGNGSFHLAEEPKMFPEERILEAKRFQIQLSLGHASEDARRSGSKNVKVAQRKG 325
           VTS + K N + H+ + P  FPEE++L A+ +++Q+ LG    DA + G           
Sbjct: 768 VTSGIAKDNATDHVIK-PVKFPEEQVLSARSWKLQIKLG----DATKFG----------- 811

Query: 326 SFKATFLNKRKRSEGNDSKCKTQKQVREASRSYLDLNMPLEEVDEDNNDSDCENQSMVEN 385
                 +NKRK       + +T ++  +  RSYLDLN+P+ E  E + D + E++     
Sbjct: 812 ------VNKRKY------ELETAQRAVKVQRSYLDLNLPVNET-EFSPDHEAEDR----- 853

Query: 386 SEAWLSDFCDQIDGEVVFKPFNFDSLAEQVIECVETRFQRTFGSEFLLEIDYEVMAQILA 445
            +AW  +F +++DG+V FKP +FD LA+ + E + + F+R FGSE  LE+D EV+ QILA
Sbjct: 854 -DAWFDEFIEKVDGKVTFKPVDFDELAKNIQEKIGSHFERCFGSETHLELDKEVILQILA 912

Query: 446 AAWLS------DKKKSVEDWIEHVVGRSFAEARQKYHHHHPAAEYVMKLVNCESIFVEEQ 499
           A+W S      + +  V+ W++ V+ RSFAEA+QKY  +       +KLV   S      
Sbjct: 913 ASWSSLSSGEEEGRTIVDQWMQTVLARSFAEAKQKYGSNPMLG---VKLVASSSGL---- 965

Query: 500 ALGVCLPARINL 511
           A GV LPA++++
Sbjct: 966 ASGVELPAKVDV 977


>AT2G40130.2 | Symbols:  | Double Clp-N motif-containing P-loop
           nucleoside triphosphate hydrolases superfamily protein |
           chr2:16766030-16769074 FORWARD LENGTH=910
          Length = 910

 Score =  180 bits (457), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/402 (32%), Positives = 208/402 (51%), Gaps = 46/402 (11%)

Query: 107 FKSLYQHIIEKVGRQDKAIYDITRTISLCRSGVGKRSGSHVRRDVWLAFLGPDRLGKRKI 166
           FK +Y+ + + V  QD+A     R IS   S   K   S  RRDVWL  +GPD +GKR++
Sbjct: 537 FKIIYRRLTDMVSGQDEA----ARVISCALSQPPK---SVTRRDVWLNLVGPDTVGKRRM 589

Query: 167 ASALAEILFQNRQSVITVDLSFQESPYQSNSTFEFQNSCCHDV--LRRKIVVDYIAGELS 224
           +  LAEI++Q+    + VDL   E               C D   LR K +VD+I   + 
Sbjct: 590 SLVLAEIVYQSEHRFMAVDLGAAEQGMGG----------CDDPMRLRGKTMVDHIFEVMC 639

Query: 225 KKPHSVVFLENIDKADFLVQSSLFQAIRTGKFPYSLGREIIVTSTVFKGNGSFHLAEEPK 284
           + P  VVFLENI+KAD  +Q SL +AI TGKF  S GRE+ + +T+F    S   +    
Sbjct: 640 RNPFCVVFLENIEKADEKLQMSLSKAIETGKFMDSHGREVGIGNTIFVMTSSSQGSATTT 699

Query: 285 MFPEERILEAKRFQIQLSLGHASEDARRSGSKNVKVAQRKGSFKATFLNKRK-RSEGNDS 343
            + EE++L  K  Q+++ +   S            +   +  +  T +NKRK    GN  
Sbjct: 700 SYSEEKLLRVKGRQVEIRIETVSS-----------LPMVRSVYGPTSVNKRKLMGLGNLQ 748

Query: 344 KCK----TQKQVREASRSYLDLNMPLEEVDEDNNDSDCENQSMVENSEAWLSDFCDQIDG 399
           + K    + K++   +   LDLN+P +E  E      CE     ENS  WL +  +    
Sbjct: 749 ETKDTVESVKRLNRTTNGVLDLNLPAQET-EIEEKYHCE-----ENSNVWLMNLKNHKRL 802

Query: 400 -EVVFKPFNFDSLAEQVIECVETRFQRTFGSEFLLEIDYEVMAQILAAAWLSDKKKSVED 458
            EV FKPF+F+ LAE++ + V+  F +   S+ LLE+D +++ ++LAA + SD +K +++
Sbjct: 803 IEVPFKPFDFEGLAEKIKKSVKENFDKCVRSDCLLEVDPKIIERLLAAVYFSDSRKDIKE 862

Query: 459 WIEHVVGRSFAEARQKYHHHHPAAEYVMKLVNCE-SIFVEEQ 499
            +E+++   F   +++Y         V+KLV  +  IF+E+Q
Sbjct: 863 LLENIMSPVFLRIKERYEI---TTSCVVKLVGRDLDIFLEDQ 901


>AT5G57710.1 | Symbols:  | Double Clp-N motif-containing P-loop
           nucleoside triphosphate hydrolases superfamily protein |
           chr5:23384794-23388052 FORWARD LENGTH=990
          Length = 990

 Score =  135 bits (341), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 199/443 (44%), Gaps = 64/443 (14%)

Query: 34  TPVTTELVLGTKYSSAAHEPDTPKGSDHRMHPQHLSDSLSTDFDAMNESASHQIARSSSC 93
           +PV T+LVLG          D+ K  D ++           DF     S S Q   + S 
Sbjct: 552 SPVQTDLVLG-------RAEDSEKAGDVQVR----------DFLGCISSESVQNNNNISV 594

Query: 94  SGPHLEGKFETVD-FKSLYQHIIEKVGRQDKAIYDITRTISLCRSGVGKRSGSHVRRDVW 152
                 G    +D FK L + + EKV  Q+ A   +  T+S C+ G GKR G   + DVW
Sbjct: 595 LQKENLGNSLDIDLFKKLLKGMTEKVWWQNDAAAAVAATVSQCKLGNGKRRGVLSKGDVW 654

Query: 153 LAFLGPDRLGKRKIASALAEILFQNRQSVITVDLSFQESPYQSNSTFEFQNSCCHDVLRR 212
           L F GPDR+GKRK+ SAL+ +++    + I + L  ++     NS+F           R 
Sbjct: 655 LLFSGPDRVGKRKMVSALSSLVYGT--NPIMIQLGSRQDAGDGNSSF-----------RG 701

Query: 213 KIVVDYIAGELSKKPHSVVFLENIDKADFLVQSSLFQAIRTGKFPYSLGREIIVTSTVFK 272
           K  +D IA  + + P SV+ LE+ID+AD LV+ S+ QA+  G+   S GREI + + +F 
Sbjct: 702 KTALDKIAETVKRSPFSVILLEDIDEADMLVRGSIKQAMDRGRIRDSHGREISLGNVIFV 761

Query: 273 GNGSFHLAEEPKMFPEERILEAKRFQIQLSLGHASEDARRSGSKNVKVAQRKGSFKATFL 332
              S+H A     F +    EAK   +      ASE  R       K  +R+ S+  +  
Sbjct: 762 MTASWHFAGTKTSFLDN---EAKLRDL------ASESWRLRLCMREKFGKRRASWLCS-- 810

Query: 333 NKRKRSEGNDSKCKTQKQVREASRSYLDLNMPLEEVDEDNNDSD--CENQSMVENSEAWL 390
                    D +  T+ +    S    DLN   +  D  +N SD   +N    +     L
Sbjct: 811 ---------DEERLTKPKKEHGSGLSFDLNQAADTDDGSHNTSDLTTDNDQDEQGFSGKL 861

Query: 391 S---------DFCDQIDGEVVFKPFNFDSLAEQVIECVETRFQRTFGSEFLLEIDYEVMA 441
           S         D   ++D  V F+  +F ++  ++ E +  RF+   G    +E++ E + 
Sbjct: 862 SLQCVPFAFHDMVSRVDDAVAFRAVDFAAVRRRITETLSERFETIIGESLSVEVEEEALQ 921

Query: 442 QILAAAWLSDKKKSVEDWIEHVV 464
           +IL+  WL   +  +E+WIE  +
Sbjct: 922 RILSGVWLG--QTELEEWIEKAI 942


>AT4G30350.1 | Symbols:  | Double Clp-N motif-containing P-loop
           nucleoside triphosphate hydrolases superfamily protein |
           chr4:14848031-14850973 FORWARD LENGTH=924
          Length = 924

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 180/381 (47%), Gaps = 56/381 (14%)

Query: 98  LEGKFETVDFKSLYQHIIEKVGRQDKAIYDITRTISLCRSGVGKRSGSHVRRDVWLAFLG 157
           L   F+   FK L + + + V  Q  A   +   I+ C+ G GK  G     D+WL F G
Sbjct: 561 LGDSFDIDLFKKLLKGLAKSVWWQHDAASSVAAAITECKHGNGKSKG-----DIWLMFTG 615

Query: 158 PDRLGKRKIASALAEILFQNRQSVITVDLSFQESPYQSNSTFEFQNSCCHDVLRRKIVVD 217
           PDR GK K+ASAL++++  ++   IT+ L        S+   +  N      +R K  +D
Sbjct: 616 PDRAGKSKMASALSDLVSGSQP--ITISLG------SSSRMDDGLN------IRGKTALD 661

Query: 218 YIAGELSKKPHSVVFLENIDKADFLVQSSLFQAIRTGKFPYSLGREIIVTSTV--FKGNG 275
             A  + + P +V+ LE+ID+AD L+++++  AI  G+   S GRE+ + + +     N 
Sbjct: 662 RFAEAVRRNPFAVIVLEDIDEADILLRNNVKIAIERGRICDSYGREVSLGNVIIILTANS 721

Query: 276 SFHLAEEPKMFPEERI--LEAKRFQIQLSLGHASEDARRSGSKNVKVAQRKGSFKATFLN 333
           S   A+      E R+  L  K ++++LS+ ++S+  +R               K  +L 
Sbjct: 722 SLGSAKNVASIDETRLESLVNKGWELRLSVCNSSKTRKR---------------KPNWL- 765

Query: 334 KRKRSEGNDSKCKTQKQVREASRSYLDLNMPLEEVDEDNNDSDCENQSMVENSEAWLSDF 393
                  ++ + K +K++        DLN    E  E ++ SD   +   E++   +   
Sbjct: 766 -----YSDNDQTKQRKEI------CFDLN----EAAEFDSSSDVTVEHDQEDNGNLVHKL 810

Query: 394 CDQIDGEVVFKPFNFDSLAEQVIECVETRFQRTFGSEFLLEIDYEVMAQILAAAWLSDKK 453
              +D  ++F+P +FDS+  +  E ++ RF         +EI+ + + +I  A WLS  K
Sbjct: 811 VGLVDDAILFRPVDFDSIKSKTAESLKKRFSNGLADGLTVEIEDDALERIAGAIWLS--K 868

Query: 454 KSVEDWIEHVVGRSFAEARQK 474
            S+E+W+E  +G S    + +
Sbjct: 869 ISLEEWLEEAMGSSLNSVKSR 889


>AT3G52490.1 | Symbols:  | Double Clp-N motif-containing P-loop
           nucleoside triphosphate hydrolases superfamily protein |
           chr3:19455850-19458721 REVERSE LENGTH=815
          Length = 815

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 14/176 (7%)

Query: 97  HLEGKFETVD---FKSLYQHIIEKVGRQDKAIYDITRTISLCRSGVGKR--SGSHVRR-D 150
           H   +F+ ++     +L   +  KV  Q   + ++ +T+  CRSG   R  +G+  ++ D
Sbjct: 561 HASSRFKEMNAENLATLCAALESKVPWQKDLVPELAKTVLKCRSGSSTRKINGNEDKKED 620

Query: 151 VWLAFLGPDRLGKRKIASALAEILFQNRQSVITVDLSFQESPYQSNSTFEFQNSCCHDVL 210
            W+ F G D   K KIA  LA+++F ++ S +++ LS   S    ++  + +N      L
Sbjct: 621 TWMFFQGLDVDAKEKIARELAKLVFGSQDSFVSICLSSFSSTRSDSAE-DLRN----KRL 675

Query: 211 RRKIVVDYI---AGELSKKPHSVVFLENIDKADFLVQSSLFQAIRTGKFPYSLGRE 263
           R +  + YI   +  +S  P+ V+ +E+I++AD+L Q    +A+  G+   S G E
Sbjct: 676 RDEQSLSYIERFSEAVSLDPNRVILVEDIEQADYLSQVGFKRAVERGRVCNSSGEE 731