Miyakogusa Predicted Gene

Lj0g3v0128359.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128359.1 Non Chatacterized Hit- tr|I1LA31|I1LA31_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,31.63,2e-16,Ran
BP2/NZF zinc finger-like,NULL; zf-RanBP,Zinc finger, RanBP2-type;
ZF_RANBP2_2,Zinc finger, RanBP,CUFF.7732.1
         (390 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48570.1 | Symbols:  | zinc finger (Ran-binding) family prote...   328   3e-90
AT1G70650.2 | Symbols:  | Ran BP2/NZF zinc finger-like superfami...   207   8e-54
AT1G70650.1 | Symbols:  | Ran BP2/NZF zinc finger-like superfami...   207   8e-54
AT1G55040.1 | Symbols:  | zinc finger (Ran-binding) family prote...   186   3e-47
AT5G17790.1 | Symbols: VAR3 | zinc finger (Ran-binding) family p...   133   2e-31
AT1G53460.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...    65   8e-11
AT3G15680.1 | Symbols:  | Ran BP2/NZF zinc finger-like superfami...    58   9e-09
AT2G26695.1 | Symbols:  | Ran BP2/NZF zinc finger-like superfami...    57   3e-08
AT5G25490.1 | Symbols:  | Ran BP2/NZF zinc finger-like superfami...    55   7e-08

>AT1G48570.1 | Symbols:  | zinc finger (Ran-binding) family protein
           | chr1:17955455-17957661 REVERSE LENGTH=455
          Length = 455

 Score =  328 bits (842), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 185/437 (42%), Positives = 242/437 (55%), Gaps = 69/437 (15%)

Query: 1   MSSSKLALYGIGTALFRTSRTITTNSPFLSFKPILP-----FPPLHFHRRTCFXXXXXXX 55
           MSSS++ L G              NS F   KP  P     FP +    R CF       
Sbjct: 1   MSSSRIFLVG--------------NSIFRPHKPSFPLSFNRFPSVSLRFR-CFSSDAAAA 45

Query: 56  XXXXXXXXXXXDQLHPWPEWVSFIDRLNTKGYFTKPRPSDGTVYVNVNLLKDACLSFGRD 115
                         HPWPEW++F+DRL TKGYFTK    D TVY  + L+KDACLSF RD
Sbjct: 46  VATTVDSDSPSLTPHPWPEWITFVDRLKTKGYFTKD-TEDDTVYQEMILVKDACLSFARD 104

Query: 116 RYDIFKLLPVEDIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRGSCDRAY 175
           RYD+ + L   D+QA+VE GCPNL RK VNS+KR+RAH+KL E DVC +C LR SCDRAY
Sbjct: 105 RYDVLRSLSSGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGSCDLRSSCDRAY 164

Query: 176 VTLNEFEADARTVDIVRILLFYAIDPLVFNGGEKQPGREVIDSSVRKLLSQLIELSE--- 232
           V L + EADARTVD++R+LLF A+D +V + GE  PG+E++  S R+LL +L+E SE   
Sbjct: 165 VILKDTEADARTVDVMRLLLFNALDSIVISRGEVPPGKELVHESARRLLLELVEFSEKPL 224

Query: 233 -----------TSTXXXXXXXXVRSKRTAQEAVAKGQLNSMTNKV--------------- 266
                      +S          R+   +Q    K + +  + +V               
Sbjct: 225 IPALPKPSSKESSLPSKERAFKSRNDEPSQRVAFKSRNDDPSQRVAFKSRNDEPSHRVAF 284

Query: 267 --------HKDVEMKSGDWMCTKCNFMNFSRNMQCLNCK---DDRPKNSDLSGVEMKQGD 315
                    +D  + S DW C KC+F+NF+RN +C  C    D RP         +K+GD
Sbjct: 285 KSRNDESSQRDRPLYSADWACPKCDFVNFARNERCRECNEVADRRP-----VAAVVKEGD 339

Query: 316 WICPECNFLNFSRNKQCLKCKTEGPERVNL-GVVEMKKGDWTCPKCEFKNYASNVKCLRC 374
           W+CPEC+FLNF+RN+ CLKCK +GP++ ++  +VEMKKGDW C  C + N+ASN +C  C
Sbjct: 340 WLCPECSFLNFTRNQSCLKCKAKGPKKTSMVNIVEMKKGDWNCTGCGYMNFASNKQCREC 399

Query: 375 PEPRPKKNA--GDWNCP 389
            E R K  A  GDW CP
Sbjct: 400 REQRHKTLAEPGDWECP 416



 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)

Query: 270 VEMKSGDWMCTKCNFMNFSRNMQCLNCKDDRPKNSDLSGVEMKQGDWICPECNFLNFSRN 329
           VEMK GDW CT C +MNF+ N QC  C++ R K         + GDW CP C+F+NF RN
Sbjct: 373 VEMKKGDWNCTGCGYMNFASNKQCRECREQRHK------TLAEPGDWECPSCDFVNFRRN 426

Query: 330 KQCLKCKTEGPERVN 344
             C KC+ + P + N
Sbjct: 427 DACKKCECKRPSQAN 441


>AT1G70650.2 | Symbols:  | Ran BP2/NZF zinc finger-like superfamily
           protein | chr1:26638158-26641949 FORWARD LENGTH=595
          Length = 595

 Score =  207 bits (528), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 114/321 (35%), Positives = 176/321 (54%), Gaps = 33/321 (10%)

Query: 70  HPWPEWVSFIDRLNTKGYFTK---PRPSDGTVYVNVNLLKDACLSFGRDRYDIFKLLPVE 126
           HPWPEW+  +  L  KGYF +   P  S        N ++ ACL+F R R+ + + L  +
Sbjct: 44  HPWPEWLDLMGMLAKKGYFEESLIPLMSSK----ESNHIRTACLNFARHRFTLVRNLSKK 99

Query: 127 DIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRGSCDRAYVTLNEFEADAR 186
           DI+ I   GCP+  RK VNS KRLRA++ ++E +VC +C+LRG C+RAY    + E  AR
Sbjct: 100 DIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEG-AR 158

Query: 187 TVDIVRILLFYAIDPLVFNGGEKQPGREVIDSSVRKLLSQLIELSETSTXXXXXXXXVRS 246
           T+D++R+LL Y +D +      +    ++++ SVRKLL + +  S T             
Sbjct: 159 TIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDF----------- 207

Query: 247 KRTAQEAVAKGQLNSMTNKV-HKDVEMKSGDWMCTKCNFMNFSRNMQCLNC------KDD 299
             +A+   A  +L   +  +  +D   + GDW CT+C F+NF++N++CL C      +  
Sbjct: 208 -ESAETETAGDELQPNSQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFSEERLK 266

Query: 300 RPKNSDLSGVEMKQGDWICPECNFLNFSRNKQCLKCKTEGPERVNLGVVEMKKGDWTCPK 359
           + K      + +K+GDWIC  CNFLNFS+N +CL+CK +   R      ++  G+W C  
Sbjct: 267 QLKEEQKDHLPLKKGDWICQTCNFLNFSKNTRCLRCKDKPTLR------QINPGEWECES 320

Query: 360 CEFKNYASNVKCLRCPEPRPK 380
           C + N+  N  CL+C   R K
Sbjct: 321 CNYINFRRNSICLKCDHKRQK 341


>AT1G70650.1 | Symbols:  | Ran BP2/NZF zinc finger-like superfamily
           protein | chr1:26638158-26640126 FORWARD LENGTH=466
          Length = 466

 Score =  207 bits (528), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 114/321 (35%), Positives = 176/321 (54%), Gaps = 33/321 (10%)

Query: 70  HPWPEWVSFIDRLNTKGYFTK---PRPSDGTVYVNVNLLKDACLSFGRDRYDIFKLLPVE 126
           HPWPEW+  +  L  KGYF +   P  S        N ++ ACL+F R R+ + + L  +
Sbjct: 44  HPWPEWLDLMGMLAKKGYFEESLIPLMSSK----ESNHIRTACLNFARHRFTLVRNLSKK 99

Query: 127 DIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRGSCDRAYVTLNEFEADAR 186
           DI+ I   GCP+  RK VNS KRLRA++ ++E +VC +C+LRG C+RAY    + E  AR
Sbjct: 100 DIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEG-AR 158

Query: 187 TVDIVRILLFYAIDPLVFNGGEKQPGREVIDSSVRKLLSQLIELSETSTXXXXXXXXVRS 246
           T+D++R+LL Y +D +      +    ++++ SVRKLL + +  S T             
Sbjct: 159 TIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDF----------- 207

Query: 247 KRTAQEAVAKGQLNSMTNKV-HKDVEMKSGDWMCTKCNFMNFSRNMQCLNC------KDD 299
             +A+   A  +L   +  +  +D   + GDW CT+C F+NF++N++CL C      +  
Sbjct: 208 -ESAETETAGDELQPNSQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFSEERLK 266

Query: 300 RPKNSDLSGVEMKQGDWICPECNFLNFSRNKQCLKCKTEGPERVNLGVVEMKKGDWTCPK 359
           + K      + +K+GDWIC  CNFLNFS+N +CL+CK +   R      ++  G+W C  
Sbjct: 267 QLKEEQKDHLPLKKGDWICQTCNFLNFSKNTRCLRCKDKPTLR------QINPGEWECES 320

Query: 360 CEFKNYASNVKCLRCPEPRPK 380
           C + N+  N  CL+C   R K
Sbjct: 321 CNYINFRRNSICLKCDHKRQK 341


>AT1G55040.1 | Symbols:  | zinc finger (Ran-binding) family protein
           | chr1:20534895-20538901 FORWARD LENGTH=849
          Length = 849

 Score =  186 bits (471), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 158/299 (52%), Gaps = 39/299 (13%)

Query: 69  LHPWPEWVSFIDRLNTKGYFTKPRPSDGTVYVN------------------VNLLKD--- 107
           +HPWPEW+  ++RL  + YF   R  D    VN                  V L +D   
Sbjct: 146 VHPWPEWMELMERLVKQNYFDHRRERDDDDMVNSLGIDVSSVGLGEDENVGVALFQDFRA 205

Query: 108 ---ACLSFGRDRYDIFKLLPVEDIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSA 164
              AC +FG+DR+DI + L   DIQ +V  GCP   RK V S K LR  + L+E DVCS+
Sbjct: 206 VQNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSS 265

Query: 165 CSLRGSCDRAYVTLNEFEADARTVDIVRILLFYAIDPLVFNG---GEKQPGREVIDSSVR 221
           CSLR SC++A++  N+ E +ART+D++RIL  Y  DPL  NG    +    ++ + S VR
Sbjct: 266 CSLRNSCEKAFLLTNK-EDEARTIDLMRILFTYGFDPL--NGTVANKSLLKKKSVKSVVR 322

Query: 222 KLLSQLIELSETSTXXXXXXXXVRSKRTAQEAVAKGQLNSMTNKVHKDVEMKSGDWMCTK 281
           KLL ++++LS            +   + A   V +            DVEMK GDW+C K
Sbjct: 323 KLLHEIVKLSAVPIDPNLTPPVI---KRAPPKVKQPPPTPKRRVGRDDVEMKKGDWLCPK 379

Query: 282 CNFMNFSRNMQCLNCKDDRPKNSDLSGVEMKQGDWICPECNFLNFSRNKQCLKCKTEGP 340
           C+FMNF++N  CL C   RPK       ++  G+W CPECNFLN+ RN  C  C  + P
Sbjct: 380 CDFMNFAKNTICLQCDAKRPKR------QLLPGEWECPECNFLNYRRNMACFHCDCKRP 432



 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 309 VEMKQGDWICPECNFLNFSRNKQCLKCKTEGPERVNLGVVEMKKGDWTCPKCEFKNYASN 368
           VEMK+GDW+CP+C+F+NF++N  CL+C  + P+R      ++  G+W CP+C F NY  N
Sbjct: 368 VEMKKGDWLCPKCDFMNFAKNTICLQCDAKRPKR------QLLPGEWECPECNFLNYRRN 421

Query: 369 VKCLRCPEPRP 379
           + C  C   RP
Sbjct: 422 MACFHCDCKRP 432



 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 2/51 (3%)

Query: 342 RVNLGVVEMKKGDWTCPKCEFKNYASNVKCLRCPEPRPKKN--AGDWNCPK 390
           RV    VEMKKGDW CPKC+F N+A N  CL+C   RPK+    G+W CP+
Sbjct: 362 RVGRDDVEMKKGDWLCPKCDFMNFAKNTICLQCDAKRPKRQLLPGEWECPE 412


>AT5G17790.1 | Symbols: VAR3 | zinc finger (Ran-binding) family
           protein | chr5:5869810-5872671 REVERSE LENGTH=758
          Length = 758

 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 141/281 (50%), Gaps = 39/281 (13%)

Query: 73  PEWVSFIDRLNTKGYFTKPRPSDGTVYVNVNLLKD-------ACLSFGRDRYDIFKLLPV 125
           PEW   +  L+  GYF+      G          D       ACL+  R+R ++ ++L  
Sbjct: 93  PEWTELLQSLSKAGYFSDSGSISGLESEFFPGFPDELLRPALACLALARERPELLEMLSR 152

Query: 126 EDIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRGSCDRAYVTLNEFEADA 185
            D++ +VE G P L +   +S KR+  +L+           L+G        L + E  A
Sbjct: 153 RDVEVLVENGKPFLFKTGPDSLKRMSLYLR---------SGLQG-----IGKLMDMEK-A 197

Query: 186 RTVDIVRILLFYAIDPLVFNGGEKQPGREVIDSSVRKLLSQLIELSETSTXXXXXXXXVR 245
            TVD++R++L Y +D +  +   KQ  +E+++SSVR LLSQ+ ++S            V 
Sbjct: 198 STVDLMRLILSYVVD-VASSEESKQHNKEIMESSVRSLLSQIAKMS-----LRPPESNVH 251

Query: 246 SKRTAQEAVAKGQ-LNSMTNKVHKDVEMKSGDWMCTKCNFMNFSRNMQCLNCKDDRPKNS 304
                Q +   GQ + S  N    +VEMK GDW+C++C+ MNF+RN++C  C + RPK  
Sbjct: 252 DTMQNQYSDRDGQGVRSFQN----NVEMKRGDWICSRCSGMNFARNVKCFQCDEARPKRQ 307

Query: 305 DLSGVEMKQGDWICPECNFLNFSRNKQCLKCKTEGPERVNL 345
            L+G E     W CP+C+F N+ RN  CL+C  + P   +L
Sbjct: 308 -LTGSE-----WECPQCDFYNYGRNVACLRCDCKRPRDSSL 342



 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 2/45 (4%)

Query: 348 VEMKKGDWTCPKCEFKNYASNVKCLRCPEPRPKKN--AGDWNCPK 390
           VEMK+GDW C +C   N+A NVKC +C E RPK+     +W CP+
Sbjct: 273 VEMKRGDWICSRCSGMNFARNVKCFQCDEARPKRQLTGSEWECPQ 317


>AT1G53460.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: Ran BP2/NZF zinc finger-like superfamily protein
           (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins
           in 88 species: Archae - 11; Bacteria - 27; Metazoa -
           119; Fungi - 17; Plants - 101; Viruses - 2; Other
           Eukaryotes - 208 (source: NCBI BLink). |
           chr1:19954558-19956509 REVERSE LENGTH=314
          Length = 314

 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 11/168 (6%)

Query: 74  EWVSFIDRLNTKGYFTKPRPSDGTVYVNVNL--------LKDACLSFGRDRYDIFKLLPV 125
           E VSF+  L+ +GY  K     G      NL        +K A   FG+D  +I K L  
Sbjct: 144 EMVSFVRLLHKEGYLNKANFITGEKLDMGNLDEEYARTFVKFAAERFGKDYQEIAKWLSG 203

Query: 126 EDIQAIVEGGCPNLLRKAVNSAKRLRAHLKLEEADVCSACSLRGSCDRAYVTLNEFEADA 185
            D++ IV  GCP+L ++AV +AK LR    + E +VC  C L+  C   +   + ++   
Sbjct: 204 SDLKKIVLFGCPSLEKRAVFAAKTLRNFFDIHENNVCEKCVLKEKCK--FPNQSVWDGKT 261

Query: 186 RTVDIVRILLFYAIDPLVFNGGEKQPGREVIDSSVRKLLSQLIELSET 233
           + + +  ++    + PL     + Q  +EV D SV +LL+++  LS T
Sbjct: 262 KHLHLSVVMKVITLYPLDLTHPKLQVPQEVQD-SVSRLLTEIQNLSRT 308


>AT3G15680.1 | Symbols:  | Ran BP2/NZF zinc finger-like superfamily
           protein | chr3:5315437-5316048 FORWARD LENGTH=164
          Length = 164

 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 57/158 (36%), Gaps = 48/158 (30%)

Query: 273 KSGDWMCTKCNFMNFSRNMQCLNCKDDRPKNSDLSGV-------------------EMKQ 313
           + GDW C  C+ +NF R   C  C D R     + G+                   +++ 
Sbjct: 3   RPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRP 62

Query: 314 GDWICP--ECNFLNFSRNKQCLKCKTEGPE-----------------------RV--NLG 346
           GDW C    C   NF+    C KC T   E                       RV  N G
Sbjct: 63  GDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGG 122

Query: 347 VVEMKKGDWTCPK--CEFKNYASNVKCLRCPEPRPKKN 382
               K GDW C +  C   N+AS ++C RC  PR   N
Sbjct: 123 RSSWKSGDWICTRIGCNEHNFASRMECFRCNAPRDFSN 160


>AT2G26695.1 | Symbols:  | Ran BP2/NZF zinc finger-like superfamily
           protein | chr2:11365275-11365789 FORWARD LENGTH=138
          Length = 138

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 52/133 (39%), Gaps = 24/133 (18%)

Query: 270 VEMKSGDWMCTKCNFMNFSRNMQCLNCKDDRPKNSDLSG-----VEMKQGDWICP--ECN 322
           +    GDW+C  C   NF +   C  C   +    D+S       E+  GDW C    C 
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCG 60

Query: 323 FLNFSRNKQCLKC---KTEGPERV---------NLGVV---EMKKGDWTCPK--CEFKNY 365
             N++    C +C   K E  E+          N G       K GDW CP+  C   NY
Sbjct: 61  SHNYASRTSCYRCGMIKVEYTEQYYGAQMVAYGNDGAACPPGWKTGDWVCPRVGCGVHNY 120

Query: 366 ASNVKCLRCPEPR 378
           AS  +C +C   R
Sbjct: 121 ASRAECFKCKTTR 133


>AT5G25490.1 | Symbols:  | Ran BP2/NZF zinc finger-like superfamily
           protein | chr5:8876639-8877339 FORWARD LENGTH=170
          Length = 170

 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 61/160 (38%), Gaps = 54/160 (33%)

Query: 273 KSGDWMCTKCNFMNFSRNMQCLNCKDDRPK--NSDL----------------SGVEMKQG 314
           + GDW C  C+ +NF R   C  C++ RP   ++DL                +G +++ G
Sbjct: 3   RPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPG 62

Query: 315 DWIC--PECNFLNFSRNKQCLKCKTEGPE------RVNLGVVEM---------------- 350
           DW C   +C   NF+    C KC     E          G ++M                
Sbjct: 63  DWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSS 122

Query: 351 ----------KKGDWTCPK--CEFKNYASNVKCLRCPEPR 378
                     K GDW CP+  C   N+AS  +C RC  P+
Sbjct: 123 GGGGTGRSPWKSGDWICPRSGCNEHNFASRSECFRCNAPK 162