Miyakogusa Predicted Gene

Lj0g3v0127859.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0127859.1 tr|F2DIP5|F2DIP5_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,54.88,5e-17,LexA/Signal
peptidase,Peptidase S24/S26A/S26B/S26C; SPASE_I_1,Peptidase S26A,
signal peptidase I, se,CUFF.7871.1
         (245 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06870.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family pr...   180   7e-46
AT2G30440.1 | Symbols: TPP | thylakoid processing peptide | chr2...   160   5e-40
AT3G24590.1 | Symbols: PLSP1 | plastidic type i signal peptidase...    70   2e-12

>AT1G06870.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family
           protein | chr1:2108832-2110642 FORWARD LENGTH=367
          Length = 367

 Score =  180 bits (457), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/252 (44%), Positives = 145/252 (57%), Gaps = 30/252 (11%)

Query: 1   MAIRATFSFSGYVAQNLVSSAGVRVA--NSRCVQECWILSRFFGTNQKPD---RDP-SGT 54
           MAIR TF++S YVA+++ SSAG RV   + R   E W+  RF G NQ PD   + P S T
Sbjct: 1   MAIRVTFTYSSYVARSIASSAGTRVGTGDVRSCFETWVRPRFCGHNQIPDIVDKSPGSNT 60

Query: 55  VRSFFSDRERPKSNSWVKNSAYSTLAGEILGDNFSNPIVLGLISVMKXXXXXXXXXXXXX 114
                  R RP S      S YST+A EIL +   +P+VLG+IS+M              
Sbjct: 61  WGPSSGPRARPAS------SMYSTIAREILEEGCKSPLVLGMISLMNLTGAPQFSGMTG- 113

Query: 115 XXXXFGISPIKTSSIIPFLQGSKWLPCN--ESVPDPTWEVDKGGTPCVVEXXXXXXXXXX 172
                GISP KTSS+IPFL+GSKW+PC+   ++     EVD+GG  C  +          
Sbjct: 114 ----LGISPFKTSSVIPFLRGSKWMPCSIPATLSTDIAEVDRGGKVCDPKVKLELSDKVS 169

Query: 173 XXXXXXXNSRELERTSWITRMLNVCSEDTKAAFTAITVSLLFKSFLAEPRSIPSASMYPT 232
                           W+ ++LN+CSED KAAFTA+TVSLLF+S LAEP+SIPS SM PT
Sbjct: 170 NGG-----------NGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPT 218

Query: 233 LEVGDRILAEKV 244
           L+VGDR++AEKV
Sbjct: 219 LDVGDRVIAEKV 230


>AT2G30440.1 | Symbols: TPP | thylakoid processing peptide |
           chr2:12973244-12975027 FORWARD LENGTH=340
          Length = 340

 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/246 (41%), Positives = 136/246 (55%), Gaps = 48/246 (19%)

Query: 1   MAIRATFSFSGYVAQNLVSSAGVRVANSRCVQECWILSRFFGTNQKPDRDPSGTVRSFFS 60
           MAIR TF++S +VA+NLV   G RV       E  +  RFF   +  DR P         
Sbjct: 1   MAIRITFTYSTHVARNLV---GTRVGPGGYCFESLVRPRFFSHKRDFDRSP--------- 48

Query: 61  DRERPKSNSWVKNSAYSTLAGEILGDNFSNPIVLGLISVMKXXXXXXXXXXXXXXXXXFG 120
            R RP S        Y ++A E++G+   +P+V+GLIS++K                  G
Sbjct: 49  -RNRPAS-------MYGSIARELIGEGSQSPLVMGLISILKSTTGHESSTMNV-----LG 95

Query: 121 ISPIKTSSIIPFLQGSKWLPCNESVPDPTWEVDKGGTPCVVEXXXXXXXXXXXXXXXXXN 180
           +S  K SSIIPFLQGSKW+  N  V D   +VDKGGT C                    +
Sbjct: 96  VSSFKASSIIPFLQGSKWIK-NPPVID---DVDKGGTVC-----------------DDDD 134

Query: 181 SRELER--TSWITRMLNVCSEDTKAAFTAITVSLLFKSFLAEPRSIPSASMYPTLEVGDR 238
            +E     + W+ ++L+VCSED KAAFTA+TVS+LF+S LAEP+SIPS SMYPTL+ GDR
Sbjct: 135 DKESRNGGSGWVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDR 194

Query: 239 ILAEKV 244
           ++AEKV
Sbjct: 195 VMAEKV 200


>AT3G24590.1 | Symbols: PLSP1 | plastidic type i signal peptidase 1
           | chr3:8970694-8972020 FORWARD LENGTH=291
          Length = 291

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 41/60 (68%)

Query: 185 ERTSWITRMLNVCSEDTKAAFTAITVSLLFKSFLAEPRSIPSASMYPTLEVGDRILAEKV 244
           E+       L+  S+D +  F AI VSL F+ F+AEPR IPS SMYPT +VGDR++AEKV
Sbjct: 99  EKNRLFPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKV 158