Miyakogusa Predicted Gene

Lj0g3v0127809.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0127809.1 Non Chatacterized Hit- tr|D8SZT3|D8SZT3_SELML
Putative uncharacterized protein OS=Selaginella
moelle,63.01,9e-19,TPT,Domain of unknown function DUF250,CUFF.7702.1
         (97 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32272.2 | Symbols:  | Nucleotide/sugar transporter family pr...   128   8e-31
AT4G32272.1 | Symbols:  | Nucleotide/sugar transporter family pr...   128   9e-31

>AT4G32272.2 | Symbols:  | Nucleotide/sugar transporter family
           protein | chr4:15577195-15579689 REVERSE LENGTH=359
          Length = 359

 Score =  128 bits (322), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 60/73 (82%), Positives = 66/73 (90%)

Query: 1   MWCNGIICGPILLIWTLVRGDLKMTVNFPDLLSPGFMVVLLSSCILAFFLNYCIFLNTTL 60
           MW NGIICGPIL+IWT + GDL+ T+NFP LL+PGFMVVLL SC+LAF LNYCIFLNTTL
Sbjct: 244 MWSNGIICGPILMIWTFICGDLEKTINFPHLLTPGFMVVLLCSCVLAFVLNYCIFLNTTL 303

Query: 61  NSALTQTICGNMK 73
           NSALTQTICGNMK
Sbjct: 304 NSALTQTICGNMK 316


>AT4G32272.1 | Symbols:  | Nucleotide/sugar transporter family
           protein | chr4:15577195-15579689 REVERSE LENGTH=344
          Length = 344

 Score =  128 bits (321), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 60/73 (82%), Positives = 66/73 (90%)

Query: 1   MWCNGIICGPILLIWTLVRGDLKMTVNFPDLLSPGFMVVLLSSCILAFFLNYCIFLNTTL 60
           MW NGIICGPIL+IWT + GDL+ T+NFP LL+PGFMVVLL SC+LAF LNYCIFLNTTL
Sbjct: 229 MWSNGIICGPILMIWTFICGDLEKTINFPHLLTPGFMVVLLCSCVLAFVLNYCIFLNTTL 288

Query: 61  NSALTQTICGNMK 73
           NSALTQTICGNMK
Sbjct: 289 NSALTQTICGNMK 301