Miyakogusa Predicted Gene

Lj0g3v0127779.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0127779.1 tr|D8KXY4|D8KXY4_ARAHY Acyl carrier protein
OS=Arachis hypogaea GN=ACP3-3 PE=2 SV=1,72.46,8e-18, ,CUFF.7689.1
         (68 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44620.1 | Symbols: MTACP-1, MTACP1 | mitochondrial acyl carr...    78   9e-16
AT1G65290.1 | Symbols: mtACP2 | mitochondrial acyl carrier prote...    49   1e-06

>AT2G44620.1 | Symbols: MTACP-1, MTACP1 | mitochondrial acyl
          carrier protein 1 | chr2:18414320-18415065 FORWARD
          LENGTH=122
          Length = 122

 Score = 78.2 bits (191), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 47/64 (73%)

Query: 1  MALRAAILRHIRLPLQAAAATPKLQPWHTSIRSMSSHDDHITKEEVIERVLAVVKDFPKV 60
          MALR AILRH+R+P+Q          +  +IRS SSHDDH+++E V++RVL VVK FPKV
Sbjct: 1  MALRNAILRHLRVPVQTLGLNQSKIGFLGTIRSFSSHDDHLSREAVVDRVLDVVKSFPKV 60

Query: 61 DPSK 64
          DPSK
Sbjct: 61 DPSK 64


>AT1G65290.1 | Symbols: mtACP2 | mitochondrial acyl carrier
          protein 2 | chr1:24249088-24250366 REVERSE LENGTH=126
          Length = 126

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)

Query: 1  MALRAAILRHIRLPLQAAAATPK--LQPWHTSIRSMSSH--DDHITKEEVIERVLAVVKD 56
          MA R A+LR++R+ +      P+  + P+   +R  S       + K EV +RVL+VVK+
Sbjct: 1  MAARGAMLRYLRVNVNPTIQNPRECVLPFSILLRRFSEEVRGSFLDKSEVTDRVLSVVKN 60

Query: 57 FPKVDPSK 64
          F KVDPSK
Sbjct: 61 FQKVDPSK 68