Miyakogusa Predicted Gene

Lj0g3v0127649.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0127649.1 tr|F2E7L1|F2E7L1_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,100,0,Histone H4,Histone
H4; Histone,Histone core; seg,NULL; HISTONEH4,Histone H4; HISTONE
H4,Histone H4; ,CUFF.7695.1
         (103 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G59970.1 | Symbols:  | Histone superfamily protein | chr5:241...   162   3e-41
AT5G59690.1 | Symbols:  | Histone superfamily protein | chr5:240...   162   3e-41
AT3G46320.1 | Symbols:  | Histone superfamily protein | chr3:170...   162   3e-41
AT3G53730.1 | Symbols:  | Histone superfamily protein | chr3:199...   162   3e-41
AT3G45930.1 | Symbols:  | Histone superfamily protein | chr3:168...   162   3e-41
AT2G28740.1 | Symbols: HIS4 | histone H4 | chr2:12329643-1232995...   162   3e-41
AT1G07820.2 | Symbols:  | Histone superfamily protein | chr1:242...   162   3e-41
AT1G07820.1 | Symbols:  | Histone superfamily protein | chr1:242...   162   3e-41
AT1G07660.1 | Symbols:  | Histone superfamily protein | chr1:236...   162   3e-41
AT1G07660.2 | Symbols:  | Histone superfamily protein | chr1:236...   141   8e-35

>AT5G59970.1 | Symbols:  | Histone superfamily protein |
           chr5:24146352-24146663 REVERSE LENGTH=103
          Length = 103

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>AT5G59690.1 | Symbols:  | Histone superfamily protein |
           chr5:24051649-24051960 FORWARD LENGTH=103
          Length = 103

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>AT3G46320.1 | Symbols:  | Histone superfamily protein |
           chr3:17020043-17020354 REVERSE LENGTH=103
          Length = 103

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>AT3G53730.1 | Symbols:  | Histone superfamily protein |
           chr3:19912659-19912970 REVERSE LENGTH=103
          Length = 103

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>AT3G45930.1 | Symbols:  | Histone superfamily protein |
           chr3:16883390-16883701 FORWARD LENGTH=103
          Length = 103

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>AT2G28740.1 | Symbols: HIS4 | histone H4 | chr2:12329643-12329954
           REVERSE LENGTH=103
          Length = 103

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>AT1G07820.2 | Symbols:  | Histone superfamily protein |
           chr1:2421435-2421746 REVERSE LENGTH=103
          Length = 103

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>AT1G07820.1 | Symbols:  | Histone superfamily protein |
           chr1:2421435-2421746 REVERSE LENGTH=103
          Length = 103

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>AT1G07660.1 | Symbols:  | Histone superfamily protein |
           chr1:2369212-2369523 FORWARD LENGTH=103
          Length = 103

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81

Query: 82  VTAMDVVYALKRQGRTLYGFGG 103
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103


>AT1G07660.2 | Symbols:  | Histone superfamily protein |
           chr1:2369212-2369523 FORWARD LENGTH=86
          Length = 86

 Score =  141 bits (356), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 71/71 (100%), Positives = 71/71 (100%)

Query: 33  PAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALK 92
           PAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALK
Sbjct: 16  PAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALK 75

Query: 93  RQGRTLYGFGG 103
           RQGRTLYGFGG
Sbjct: 76  RQGRTLYGFGG 86