Miyakogusa Predicted Gene
- Lj0g3v0127099.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0127099.2 tr|G7KGD4|G7KGD4_MEDTR Zinc finger CCCH
domain-containing protein OS=Medicago truncatula
GN=MTR_5g02,74.72,0,SWIB/MDM2 domain,SWIB/MDM2 domain; GYF domain,GYF;
FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type; ,CUFF.7851.2
(1276 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51120.1 | Symbols: | DNA binding;zinc ion binding;nucleic a... 626 e-179
AT2G16485.1 | Symbols: | nucleic acid binding;zinc ion binding;... 599 e-171
AT2G18090.1 | Symbols: | PHD finger family protein / SWIB compl... 363 e-100
AT5G63700.1 | Symbols: | zinc ion binding;DNA binding | chr5:25... 228 2e-59
AT5G08430.1 | Symbols: | SWIB/MDM2 domain;Plus-3;GYF | chr5:271... 157 6e-38
AT5G23480.1 | Symbols: | SWIB/MDM2 domain;Plus-3;GYF | chr5:791... 92 3e-18
AT4G34290.1 | Symbols: | SWIB/MDM2 domain superfamily protein |... 54 6e-07
AT2G14880.1 | Symbols: | SWIB/MDM2 domain superfamily protein |... 54 6e-07
AT5G36740.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 51 4e-06
AT5G36670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 50 8e-06
>AT3G51120.1 | Symbols: | DNA binding;zinc ion binding;nucleic acid
binding;nucleic acid binding | chr3:18986026-18991886
REVERSE LENGTH=1292
Length = 1292
Score = 626 bits (1614), Expect = e-179, Method: Compositional matrix adjust.
Identities = 321/598 (53%), Positives = 407/598 (68%), Gaps = 34/598 (5%)
Query: 36 ERPAPAVADGVVLKRKRGRPAKGVSKTA----XXXXXXKQPEDEEDVCFICFDGGSLVLC 91
E+ + + +KRKRGRP + + T K+ + EEDVCFICFDGG LVLC
Sbjct: 66 EQEVKVIDEAAPIKRKRGRPPRAQANTPLHIRPPPPPPKKEDKEEDVCFICFDGGDLVLC 125
Query: 92 DRRGCPKAYHPACVKRDEAFFSSKAKWNCGWHICSSCEKASHYMCYTCTYSVCKGCIDDA 151
DRR CPKAYHPAC+KRDEAFF + AKWNCGWHIC +C+KAS YMCYTCT+SVCK CI DA
Sbjct: 126 DRRNCPKAYHPACIKRDEAFFRTTAKWNCGWHICGTCQKASSYMCYTCTFSVCKRCIKDA 185
Query: 152 DFVFVRGNKGLCGICMKTIMLIEESAEGNKDKCEVDFDDKSSWEYLFKVYWMYLKEKLSL 211
D+V VRGN GLCG C+K IMLIE A+G+ + +VDFDDK SWEYLFKVYW+ LKE+LSL
Sbjct: 186 DYVIVRGNMGLCGTCIKPIMLIENIAQGDNEAVKVDFDDKLSWEYLFKVYWLCLKEELSL 245
Query: 212 TFDEILRARNSCKVAAPMSSKLHTPHELYHLKDEKGSGSENSCIDLESNNLKNKRPKRQQ 271
T DE+ RA N K + K+ + + + N +D+ N K +R
Sbjct: 246 TVDELTRANNPWKEVPNTAPKVES----------QNDHTNNRALDVAVNGTKRRRTSDSP 295
Query: 272 KFLNKGDCVDRITSGSDTGVSLPEGTKWASKELLEFVAHMKNGDTSLLTQFDVQTLLLEY 331
NK D + S+ P T WA+KELLEFV+ MKNGDTS+L+QFDVQ LLL+Y
Sbjct: 296 TLPNKLDG----KNPSNILKKAPGDTSWATKELLEFVSFMKNGDTSVLSQFDVQGLLLDY 351
Query: 332 VKKNNLRDPQQKSQIVCDFRLLKLFGKARVGYIEMLVLLEPHFLVKDNSGAANTFGAAII 391
+KK NLRDP QKSQ++CD L+KLFGK RVG+ EML LLE H L+++ A T
Sbjct: 352 IKKKNLRDPLQKSQVLCDQMLVKLFGKQRVGHFEMLKLLESHVLIQEKPKGAKTTNGETT 411
Query: 392 DAAANEGEATDDYNKQLMLVNDKKCITSKKADVLVPQNNPDAYAAVDPHNINLIYLRRNL 451
A ++ E ++ +V D++ +K D V N DAYAA+D HNINLIYLRR
Sbjct: 412 HAVPSQIEEDSVHDP---MVRDRRRKMRRKTDGRVQNENLDAYAAIDVHNINLIYLRRKF 468
Query: 452 VESLTIDTEKINENVAGSFVRIRISSGDQKQDMYRLVQVVGTSKVAEHYQIGTRTTDIKL 511
+ESL D K++E V G+ +RI++S DQK D++RLVQVVGTSK YQ+G +TTD+ L
Sbjct: 469 LESLLDDINKVDEKVVGTILRIKVSGSDQKLDIHRLVQVVGTSKAIASYQLGAKTTDVML 528
Query: 512 EILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTLQAIRVND 571
EILNL+++EVISID++S+Q +EDECKRLRQSIK GL+KRLTV +IL A TLQA+R+N+
Sbjct: 529 EILNLDKREVISIDQLSDQNITEDECKRLRQSIKCGLNKRLTVVDILKTAATLQAMRINE 588
Query: 572 LLEAEILRLNHLRDRANEKGHRKELKECVEKLQILNSPEERQRRLHEIPDVHADPNLD 629
LEAEIL+LNHLRDRA +KL++L SPEERQR L E+P+VH DP++D
Sbjct: 589 ALEAEILKLNHLRDRA-------------KKLELLKSPEERQRLLQEVPEVHTDPSMD 633
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 748 FWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLRVWRIDEKQDKSILLTDAL 799
WHY+DP+GK QGPFSM+QL +W +SGHFPP LR+WR E QD+S+LLTDAL
Sbjct: 718 IWHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYLRIWRAHENQDESVLLTDAL 769
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 1242 GNGGSYRPSPKGQRVCKFYESGYCKKGASCGYLHP 1276
G+G PKG ++CKFYESGYCK+GASC + HP
Sbjct: 1258 GSGSYAAHPPKGLKICKFYESGYCKRGASCSFWHP 1292
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%)
Query: 1000 WQAIIGEPDDFDESVSDLLAEVEAMESRGGLESPTSIM 1037
W AI+ +PD+ DESVSDLLAEVEAME G SPTS
Sbjct: 1034 WPAIVADPDECDESVSDLLAEVEAMEQNGLPSSPTSTF 1071
>AT2G16485.1 | Symbols: | nucleic acid binding;zinc ion binding;DNA
binding | chr2:7137269-7145222 REVERSE LENGTH=1773
Length = 1773
Score = 599 bits (1545), Expect = e-171, Method: Compositional matrix adjust.
Identities = 317/596 (53%), Positives = 402/596 (67%), Gaps = 39/596 (6%)
Query: 49 KRKRGRPAKGVSKTAXXXXXXKQPEDEEDVCFICFDGGSLVLCDRRGCPKAYHPACVKRD 108
KRKRGR K V T EEDVCF+CFDGG LVLCDRRGC KAYHP+CV RD
Sbjct: 580 KRKRGRNTKTVKGTGKKK--------EEDVCFMCFDGGDLVLCDRRGCTKAYHPSCVDRD 631
Query: 109 EAFFSSKAKWNCGWHICSSCEKASHYMCYTCTYSVCKGCIDDADFVFVRGNKGLCGICMK 168
EAFF +K KWNCGWH+CS CEK + Y+CYTC +S+CKGC DA F +RGNKGLC CM+
Sbjct: 632 EAFFQTKGKWNCGWHLCSKCEKTATYLCYTCMFSLCKGCAKDAVFFCIRGNKGLCETCME 691
Query: 169 TIMLIEESAEGNKDKCEVDFDDKSSWEYLFKVYWMYLKEKLSLTFDEILRARNSCKVAAP 228
T+ LIE + K+ ++DF+DK+SWEYLFK YW+ LK +LSL+ +E+ +A+ K
Sbjct: 692 TVKLIERKQQ-EKEPAQLDFNDKTSWEYLFKDYWIDLKTQLSLSPEELDQAKRPLKGHET 750
Query: 229 MSSKLHTPHELYHLKDEKGSGSENSCIDLESNNLKNKRPKRQQKFLNKGDCVDRITSGSD 288
+SK T E ++ D GS S++S KR+ + +K ++I S D
Sbjct: 751 NASKQGTASETDYVTD-GGSDSDSS------------PKKRKTRSRSKSGSAEKILSSGD 797
Query: 289 TGVSLPEGTKWASKELLEFVAHMKNGDTSLLTQFDVQTLLLEYVKKNNLRDPQQKSQIVC 348
+S E +WASKELL+ V HM+ GD S L +VQTLLL Y+K+ NLRDP++KSQ++C
Sbjct: 798 KNLS-DETMEWASKELLDLVVHMRRGDRSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVIC 856
Query: 349 DFRLLKLFGKARVGYIEMLVLLEPHFLVKDNSGAANTFGAAIIDAAANEGEATDDYNKQL 408
D RL LFGK+ VG+ EML LL+ HFL K+ + A + G + N + ++ + +
Sbjct: 857 DSRLQNLFGKSHVGHFEMLNLLDSHFLKKEQNQADDIQGDIVDTEEPNHVDVDENLDHPV 916
Query: 409 MLVNDKKCITSKKADVLVPQNNPDAYAAVDPHNINLIYLRRNLVESLTIDTEKINENVAG 468
DKK T KK Q+N D +AAVD HNINLIYLRR+LVE L D+ E VA
Sbjct: 917 KSGKDKKRKTRKKNVRKGRQSNLDDFAAVDMHNINLIYLRRSLVEDLLEDSTAFEEKVAS 976
Query: 469 SFVRIRISSGDQKQDMYRLVQVVGTSKVAEHYQIGTRTTDIKLEILNLNRKEVISIDEIS 528
+FVR+RI SG+QKQD+YRLVQVVGTSK E Y++G +TTD LEILNL++ EVISID IS
Sbjct: 977 AFVRLRI-SGNQKQDLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKTEVISIDIIS 1035
Query: 529 NQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTLQAIRVNDLLEAEILRLNHLRDRAN 588
NQ+F+EDECKRL+QSIK GL RLTVG+I KA+ LQ +RV +LLEAEILR +HLRDRA+
Sbjct: 1036 NQDFTEDECKRLKQSIKCGLINRLTVGDIQEKAIALQEVRVKNLLEAEILRFSHLRDRAS 1095
Query: 589 EKGHRKE---------------LKECVEKLQILNSPEERQRRLHEIPDVHADPNLD 629
+ G RKE L+ECVEKLQ+L SPEERQRRL EIP++HADP +D
Sbjct: 1096 DMGRRKEYPYLLKLSNSLTMLTLRECVEKLQLLKSPEERQRRLEEIPEIHADPKMD 1151
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%)
Query: 726 DISSPLPSIGTEQPFDDHLNDRFWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLRVWRI 785
+IS P++ ++ + +++ WHY+DPSGKVQGPFSM QL KWN +G+FP L +W+
Sbjct: 1287 EISMAPPAVVSQPVPKSNDSEKIWHYKDPSGKVQGPFSMAQLRKWNNTGYFPAKLEIWKA 1346
Query: 786 DEKQDKSILLTDAL 799
+E S+LLTDAL
Sbjct: 1347 NESPLDSVLLTDAL 1360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 23/104 (22%)
Query: 1174 GVGQMEVHENRSTNSYTSVVAPGLGDGQTRY-GSDRYSVPRDRSFPGPGRESGFGRVRTA 1232
G+ ++N T + T++ + G G Q Y G+ + S D SG+G R +
Sbjct: 1690 GIQSGNSNQNWGTQNQTAIPSGGSGGNQAGYWGNQQQSQNGD---------SGYGWNRQS 1740
Query: 1233 SNRQSLFGVGNGGSYRPSPKGQRVCKFY-ESGYCKKGASCGYLH 1275
+Q+ F KGQRVCKF+ E+G+C+KGASC YLH
Sbjct: 1741 GGQQNNF------------KGQRVCKFFRENGHCRKGASCNYLH 1772
>AT2G18090.1 | Symbols: | PHD finger family protein / SWIB complex
BAF60b domain-containing protein / GYF domain-containing
protein | chr2:7864501-7867317 FORWARD LENGTH=824
Length = 824
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 232/346 (67%), Gaps = 24/346 (6%)
Query: 70 KQPEDEEDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFSSKAKWNCGWHICSSCE 129
++ ++EDVCF+CFDGGSLVLCDRRGCPKAYHPACVKR EAFF S++KWNCGWHIC++C+
Sbjct: 73 RKRREDEDVCFVCFDGGSLVLCDRRGCPKAYHPACVKRTEAFFRSRSKWNCGWHICTTCQ 132
Query: 130 KASHYMCYTCTYSVCKGCIDDADFVFVRGNKGLCGICMKTIMLIEESAEGNKDKCEVDFD 189
K S YMCYTC YSVCK C+ +++V VR NKG CGICMKTIMLIE +AE NK+K +VDFD
Sbjct: 133 KDSFYMCYTCPYSVCKRCVRSSEYVVVRENKGFCGICMKTIMLIENAAEANKEKVQVDFD 192
Query: 190 DKSSWEYLFKVYWMYLKEKLSLTFDEILRARNSCKVAAPMSSKLHTPHELYHLKDEKGSG 249
D+ SWEYLFK+YW+ LKEKL L+ D++ +A+N K ++ ++K T ++ D G
Sbjct: 193 DQGSWEYLFKIYWVSLKEKLGLSLDDLTKAKNPWKSSSSTAAKRRTTSRVHEKDDGNSPG 252
Query: 250 SENSCIDLESNNLKNKRPKRQQ----KFLNKGDCVDRITSGSDTGVSLPEGTKWASKELL 305
+K +R K ++ N G +D S D L WA+ ELL
Sbjct: 253 V-----------MKIRRAKVRKMDAVSVSNLGPSLDSNCSLGDRLPQLTSAATWATNELL 301
Query: 306 EFVAHMKNGDTSLLTQFDVQTLLLEYVKKNNLRDPQQKSQIVCDFRLLKLFGKARVGYIE 365
+FV +MKNGD S+L+++DVQTL+LEYV++NNL++ Q S+I+CD +L++LFGK RV +E
Sbjct: 302 DFVGYMKNGDISVLSKYDVQTLVLEYVRRNNLQNSPQNSEIMCDSKLMRLFGKERVDNLE 361
Query: 366 MLVLLEPHFL------VKDNSGAANTFGAAIIDAAANEGEATDDYN 405
ML LL+ HF+ V DNS T + N G + D N
Sbjct: 362 MLKLLDSHFIDQVRSPVTDNSAGGVT---ETMSYQVNAGRSCDRLN 404
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 736 TEQPFDDHLNDRFWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLRVWRIDEKQDKSILL 795
+ +P D + W Y DP GK+ GPFS+ L +WN+SGHFPP+LR+WR+ E+Q SILL
Sbjct: 446 SNKPIDGLDTNMVWLYGDPDGKIHGPFSLYNLRQWNSSGHFPPELRIWRLGEQQHSSILL 505
Query: 796 TDALN 800
TDALN
Sbjct: 506 TDALN 510
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 948 QTSGQNWRLPNINNSTNCLVTTSAHDPGTKTSPHKLGFDLHIPPSPPV------CNTTWQ 1001
Q+ GQNW ++++N + S G + P D SP T WQ
Sbjct: 681 QSCGQNWNAATPSSASNVWDSNS----GLTSFPDNQEIDFLDLFSPTFKFNFASTTTDWQ 736
Query: 1002 AIIGEPDDFDESVSDLLAEVEAMESRGGLESPTSIMKRGEE-LTDGSKNDCLSFIE-LSP 1059
I+ PD+ DESVSDLLAEVEAMES+ L SPTS + EE L S ND S E SP
Sbjct: 737 PIVAGPDECDESVSDLLAEVEAMESQKRLPSPTSTFRGPEELLIRHSINDSFSPAEGHSP 796
Query: 1060 MLDAGKGDALSSTGNLHLPSQSTA 1083
LD KGD++SST +L + S+S +
Sbjct: 797 ALDVSKGDSMSSTNDLQMHSRSNS 820
>AT5G63700.1 | Symbols: | zinc ion binding;DNA binding |
chr5:25493934-25497632 REVERSE LENGTH=602
Length = 602
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 288/581 (49%), Gaps = 59/581 (10%)
Query: 79 CFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFSSKAKWNCGWHICSSCEKASHYMCYT 138
CFIC DGG+L+LCD + CPK YH +CV++D + + + C WH C C+K C
Sbjct: 25 CFICKDGGNLMLCDFKDCPKVYHESCVEKDSSASKNGDSYICMWHSCYLCKKTPKLCCLC 84
Query: 139 CTYSVCKGCIDDADFVFVRGNKGLCGICMKTIMLIEESAEGNKDKCEVDFDDKSSWEYLF 198
C+++VC+GC+ A+F+ ++G+KGLC C + + +EE E + ++D D++++E LF
Sbjct: 85 CSHAVCEGCVTHAEFIQLKGDKGLCNQCQEYVFALEEIQEYDAAGDKLDLTDRNTFECLF 144
Query: 199 KVYWMYLKEKLSLTFDEILRARNSCKVAAPMSSKLHTPHE---LYHLKDEKGSGSENSCI 255
YW K++ LTFD++ R C + P + + ++ + L D S S+
Sbjct: 145 LEYWEIAKKQEGLTFDDV---RKVC-ASKPQKKGVKSKYKDDPKFSLGDVHTSKSQK--- 197
Query: 256 DLESNNLKNK----------------------RPKRQQKFLNKGDCVDRITSGSDTGVS- 292
+ + LKNK + K KFL V+ G +
Sbjct: 198 --KGDKLKNKDDPKFALGDAHTSKSGKKGVKLKNKDDPKFLVSDHAVEDAVDYKKVGKNK 255
Query: 293 LPEGTKWASKELLEFVAHMKNGDTSLLTQFDVQTLLLEYVKKNNLRDPQQKSQIVCDFRL 352
E +W SK L++F+ + ++Q V++++ Y+++ NL D ++K ++ CD +L
Sbjct: 256 RMEFIRWGSKPLIDFLTSIGEDTREAMSQHSVESVIRRYIREKNLLDREKKKKVHCDEKL 315
Query: 353 LKLFGKARVGYIEMLVLLEPHFLVKDNSGAANTFGAAIIDAAANEGEATDDYNKQLMLVN 412
+F K + + LL H +K+N F + + + N ++M+
Sbjct: 316 YSIFRKKSINQKRIYTLLNTH--LKENLDQVEYFTPLELGFIEKNEKRFSEKNDKVMMPC 373
Query: 413 DKKCITSKKADV----LVPQNNPDAYAAVDPHNINLIYLRRNLVESLTIDTEKINENVAG 468
K+ S ++ + P+ +A ++ N+ L+YLR++LV L + + V G
Sbjct: 374 KKQKTESSDDEICEKEVQPEMRATGFATINADNLKLVYLRKSLVLELLKQNDSFVDKVVG 433
Query: 469 SFVRIRISSGDQKQDMYRLVQVVGTSKVAEHYQIGTRTTDIKLEILNLNRKEVISIDEIS 528
SFV+++ +G + Y+++QV G + ++ + L + + +SI ++
Sbjct: 434 SFVKVK--NGPRDFMAYQILQVTGIKNADD------QSEGVLLHVSGMASG--VSISKLD 483
Query: 529 NQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTLQAIRVNDLLEAEILR-LNHLRDR- 586
+ + E+E K L+Q + GL ++ TV E+ KA L D+ + I R LN L+ R
Sbjct: 484 DSDIREEEIKDLKQKVMNGLLRQTTVVEMEQKAKALHY----DITKHWIARQLNILQKRI 539
Query: 587 --ANEKGHRKELKECVEKLQILNSPEERQRRLHEIPDVHAD 625
ANEKG R+EL+E +E+ ++L P E++R L EIP + D
Sbjct: 540 NCANEKGWRRELEEYLEQRELLEKPSEQERLLKEIPRIIED 580
>AT5G08430.1 | Symbols: | SWIB/MDM2 domain;Plus-3;GYF |
chr5:2716974-2720095 FORWARD LENGTH=553
Length = 553
Score = 157 bits (396), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 174/329 (52%), Gaps = 29/329 (8%)
Query: 295 EGTKWASKELLEFVAHMKNGDTSLLTQFDVQTLLLEYVKKNNLRDPQQKSQIVCDFRLLK 354
E W S++L+EF+ + + +++++DV + +Y+ K L DP K ++VCD RL+
Sbjct: 28 EFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVL 87
Query: 355 LFGKARVGYIEMLVLLEPHFLVKDNSGAANTFGAAIIDAAANEGEATDDYNKQLMLVNDK 414
LFG + +++ LLE H+ K+N ++ + Y + ++
Sbjct: 88 LFGTRTIFRMKVYDLLEKHY--KENQ---------------DDSDFDFLYEDEPQIICHS 130
Query: 415 KCITSKKADVLVPQNNPDAYAAVDPHNINLIYLRRNLVESLTIDTEKINENVAGSFVRIR 474
+ I + + V+ + +AA+ NI L+YLR++LV+ L + + GSFVRI+
Sbjct: 131 EKIAKRTSKVV--KKPRGTFAAIVSDNIKLLYLRKSLVQELLKSPDTFEGKMLGSFVRIK 188
Query: 475 ISSGDQKQDM-YRLVQVVGTSKVAEHYQIGTRTTDIKLEILNLNRKEVISIDEISNQEFS 533
D Q Y+LVQV G K EH T D L++ N + +SI +S+ FS
Sbjct: 189 SDPNDYLQKYPYQLVQVTGVKK--EH-----GTDDFLLQVTNYVKD--VSISVLSDDNFS 239
Query: 534 EDECKRLRQSIKYGLSKRLTVGEILNKALTLQAIRVNDLLEAEILRLNHLRDRANEKGHR 593
++EC+ L Q IK GL K+ T+ E+ KA L + L EI L L DRANEKG R
Sbjct: 240 QEECEDLHQRIKNGLLKKPTIVEMEEKAKKLHKDQTKHWLGREIELLKRLIDRANEKGWR 299
Query: 594 KELKECVEKLQILNSPEERQRRLHEIPDV 622
+EL E ++K ++L +P+E+ R L E+P+V
Sbjct: 300 RELSEYLDKRELLQNPDEQARLLREVPEV 328
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 749 WHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLRVWRIDEKQDKSILLTDAL 799
W Y+DP G VQGPFS+ QL W+ + +F RVW E + ++LLTD L
Sbjct: 500 WLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTGESMESAVLLTDVL 550
>AT5G23480.1 | Symbols: | SWIB/MDM2 domain;Plus-3;GYF |
chr5:7916314-7919155 FORWARD LENGTH=570
Length = 570
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 157/338 (46%), Gaps = 72/338 (21%)
Query: 295 EGTKWASKELLEFVAHMKNGDTSLLTQFDVQTLLLEYVKKNN----LRDPQQKSQIVCDF 350
E W S+ L+EF+ + T+ +++ DV +++ Y+++ + L+ +++ + CD
Sbjct: 23 EFVGWGSRNLIEFLESLGRDTTNKISENDVTAIIMNYIREKSRETPLKSKKRRKTVACDE 82
Query: 351 RLLKLFGKARVGYIEMLVLLEPHFLVKDNSGAANTFGAAIIDAAANEGEATDDYNKQLML 410
+L LFG ++ I++ L+E H++ D ++ A++D +Q +
Sbjct: 83 KLRLLFGAGKINVIKVPDLVEKHYVENQEE-----------DLFYDDLYASEDDKQQRLS 131
Query: 411 VNDKKCITSKKADVLVPQNNPDAYAAVDPHNINLIYLRRNLVESLTIDTEKINENVAGSF 470
++DK +K+ V P+ +AA+ + L+YLR++LV+ L E V +F
Sbjct: 132 LSDKVAKQTKQV-VSKPRG---TFAAIVRDTVKLLYLRKSLVQELAKTPETFESKVVRTF 187
Query: 471 VRIRISSGDQKQDMYRLVQVVGTSK----VAEHYQIGTRTTDIKLEILNLNRKEVISIDE 526
VRI+ + +LV V G + +Q+ + +K ++
Sbjct: 188 VRIK--------NPCQLVHVTGVKEGDPIDGNLFQVTNYSYYLK----------DVTTSS 229
Query: 527 ISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTLQAIRVNDLLEAEILRLNHLRDR 586
+S+ +FS++EC+ L Q I G +KRLTV ++ KA +L
Sbjct: 230 LSDDDFSQEECEELHQRINNGFAKRLTVVDMEEKARSLH--------------------- 268
Query: 587 ANEKGHRKELKECVEKLQILNSPEERQRRLHEIPDVHA 624
++ +EK ++L +P+E++R + E+P++ A
Sbjct: 269 ----------EDYLEKRELLQNPDEQKRLVDEVPEIVA 296
>AT4G34290.1 | Symbols: | SWIB/MDM2 domain superfamily protein |
chr4:16410883-16412122 FORWARD LENGTH=144
Length = 144
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 331 YVKKNNLRDPQQKSQIVCDFRLLKLF-GKARVGYIEMLVLLEPHFL 375
Y+K+++L+DPQ K I+CD +L K+F GK RVG++E+ L+ PHFL
Sbjct: 99 YIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAKLIGPHFL 144
>AT2G14880.1 | Symbols: | SWIB/MDM2 domain superfamily protein |
chr2:6393686-6394841 REVERSE LENGTH=141
Length = 141
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 331 YVKKNNLRDPQQKSQIVCDFRLLKLF-GKARVGYIEMLVLLEPHFL 375
Y+K+++L+DPQ K +I+CD +L K+F G+ RVG++E+ L+ PHFL
Sbjct: 96 YIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
>AT5G36740.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein |
chr5:14460790-14465727 FORWARD LENGTH=1179
Length = 1179
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 76 EDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFSSKA--KWNCGWHICSSCEKASH 133
+D C IC DGG L+ CD GCP +H +C+ D F S A +NC C E A H
Sbjct: 650 DDTCGICGDGGDLICCD--GCPSTFHQSCL--DIKKFPSGAWYCYNCSCKFCEKDEAAKH 705
Query: 134 YMCYTCTYSVCKGC 147
+ S C+ C
Sbjct: 706 ETSTLPSLSSCRLC 719
>AT5G36670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:14401491-14406427 FORWARD LENGTH=1193
Length = 1193
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 76 EDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFSSKA--KWNCGWHICSSCEKASH 133
+D C IC DGG L+ CD GCP +H +C+ D F S A +NC C E A H
Sbjct: 650 DDTCGICGDGGDLICCD--GCPSTFHQSCL--DIKKFPSGAWYCYNCSCKFCEKDEAAKH 705
Query: 134 YMCYTCTYSVCKGC 147
+ S C+ C
Sbjct: 706 ETSTLPSLSSCRLC 719