Miyakogusa Predicted Gene

Lj0g3v0126739.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126739.2 tr|B9IBW3|B9IBW3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_774201 PE=4
SV=1,56.84,0,seg,NULL; Nucleotidyltransferase,NULL; PAP/OAS1
substrate-binding domain,NULL; NTP_transf_2,Nucleoti,CUFF.7657.2
         (1510 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00060.1 | Symbols: MEE44 | Nucleotidyltransferase family pro...   927   0.0  
AT5G53770.1 | Symbols:  | Nucleotidyltransferase family protein ...    90   1e-17

>AT4G00060.1 | Symbols: MEE44 | Nucleotidyltransferase family protein
            | chr4:21437-27996 FORWARD LENGTH=1481
          Length = 1481

 Score =  927 bits (2397), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/798 (59%), Positives = 553/798 (69%), Gaps = 72/798 (9%)

Query: 717  YEWPCVPSIYFPSLNSHLPPATDRLHLDVGRNWHNHFCHPFVPTLQQPRNTPIKGGCNQI 776
            YEWP V  +YF  ++SHLP ATDRLHLDVG N H +   PFV T+Q  RN  I+G   Q+
Sbjct: 680  YEWPAVAPMYFSHVSSHLPTATDRLHLDVGHNLHPYVRQPFVSTVQHARNPSIEGSHKQV 739

Query: 777  LSRPFPMSFDWPPVFRG--GVNPSPNCNYDSGFVSRRQCTFSKGLAVQSMQVDATTTDDE 834
            LSRP PMS DWPP+     G+  +  CNYDSG                            
Sbjct: 740  LSRPMPMSLDWPPMVHSNCGLTTAFTCNYDSGI--------------------------- 772

Query: 835  RKYPGDILDSPDLTNAQELADEFDNHWVSEEEYDFHTVSGIDYNQYFGGGIMYWDTSDHP 894
                  ++D P+  N  EL +E +N+W+ EE+++ HTVSG+DYNQYFGGG+MYW+ SDH 
Sbjct: 773  ------LVDIPEQKNKHELGNECENNWMLEEDFEVHTVSGVDYNQYFGGGVMYWNPSDHL 826

Query: 895  GKGFSRXXXXXXXXXXWALREADMNRTVDDMVAFPSSYSTNGLTSPTAATFCSPFDPAGT 954
            G GFSR          WA  EA+M R+VDDMVAF SSYS NGL SPTAA+FCSPF P G 
Sbjct: 827  GTGFSRPPSLSSDDSSWAWHEAEMKRSVDDMVAFSSSYSANGLDSPTAASFCSPFHPLGP 886

Query: 955  GSQTVGYVVSGNEVPGNVLHSSPVS-DAVVDEDTSGSLSNNLTGDIEGKTGDAHPYPLLR 1013
             +Q +GYVV GNE+   +L + P + +   +E+ SG+L++ L+GD+EG +GD+ PYP+LR
Sbjct: 887  PNQPLGYVVPGNEISTKILQAPPTTIEGAGEEEVSGTLAS-LSGDVEGNSGDSLPYPILR 945

Query: 1014 PIIIPNFSR-ERSRCADHKSPCVPPNRREQPRIKRPPSXXXXXXXXXXXXXXXXXXXXXX 1072
            PIIIPN S+ E  R  D KSP VPP RRE PRIKRPPS                      
Sbjct: 946  PIIIPNMSKSEYKRSYDTKSPNVPPTRREHPRIKRPPSPVVLCVPRAPRPPPPSPVSNSR 1005

Query: 1073 KQRGFPTVRSGSSSPRHWGMRGWYHDGSNLEEACLRMDGAEVVWPSWRSNNXXXXXXXXX 1132
             +RGFPTVRSGSSSPRHWGMRGW+HDG N EE      GAE+V P WR+ +         
Sbjct: 1006 ARRGFPTVRSGSSSPRHWGMRGWFHDGVNWEEP----RGAEIVLP-WRNKSLAVRPIIQP 1060

Query: 1133 XXXXXXXDRLIAISQITRDQEHVRKTITLSSTLSIYVGVHCGFLIIQPDVTFPLQPPELQ 1192
                   D LIA+SQ+ RDQEH                         PDV FPLQPPEL 
Sbjct: 1061 LPGALLQDHLIAMSQLGRDQEH-------------------------PDVAFPLQPPELL 1095

Query: 1193 SCSATSASLSLMHGMLHDEIDSFCKQVAAENMARRPYINWAVKRVTRSLQVLWPRSRTNI 1252
            +C     SLSL+HG+L+DEIDSFCKQVAAENMAR+PYINWA+KRVTRSLQVLWPRSRTNI
Sbjct: 1096 NCPMQGESLSLIHGILNDEIDSFCKQVAAENMARKPYINWAIKRVTRSLQVLWPRSRTNI 1155

Query: 1253 FGSNATGMSLPTSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWV 1312
            FGS+ATG+SLP+SDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQ+WV
Sbjct: 1156 FGSSATGLSLPSSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQEWV 1215

Query: 1313 KTDSLKTVENTAIPIIMLVVEVPLEVITSSAPVIHSLKEEPHCTPGEHVNDSHSDSIHLE 1372
            KTDSLKTVENTAIPIIMLVVEVP ++I S    I S K+ P C   +  ++ +++ +  E
Sbjct: 1216 KTDSLKTVENTAIPIIMLVVEVPCDLICS----IQSPKDGPDCITVDQDSNGNTEMVGFE 1271

Query: 1373 GSALPKSSEINFYALKESKSVRVDISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQ 1432
             SA   S   N   L  +KSVR+DISFK+PSHTGLQTT++VK LTEQFPAATPLALVLKQ
Sbjct: 1272 DSAAANSLPTNTGNLAIAKSVRLDISFKTPSHTGLQTTQLVKDLTEQFPAATPLALVLKQ 1331

Query: 1433 FLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPR 1492
            FLADR+LDQSYSGGLSSYCLVLLI RFLQHEHHLGR INQN G LLMDFLYFFGNVFDPR
Sbjct: 1332 FLADRTLDQSYSGGLSSYCLVLLITRFLQHEHHLGRSINQNLGGLLMDFLYFFGNVFDPR 1391

Query: 1493 QMRISVQGSGLYIKRERG 1510
            QMR+SVQGSG+Y  RERG
Sbjct: 1392 QMRVSVQGSGIYRNRERG 1409



 Score =  357 bits (916), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 194/399 (48%), Positives = 259/399 (64%), Gaps = 16/399 (4%)

Query: 1   MAHRQLMDSLTSHISLYHSQSXXXXXXXXXXXXXRTSILKWFSSLSLHQRLAHLTIVDSS 60
           MA  QL+DSLTSHISLY                 R++IL+WFSSLS+HQRL+HLT+VD  
Sbjct: 17  MAQNQLIDSLTSHISLY-HSHSSSSSMANTIPNPRSAILRWFSSLSVHQRLSHLTVVDPK 75

Query: 61  FVQILLQMIANLRGNGHGCFILLPDLPSRDPPFLPTLCFKKSRGLLSRVADSDAAARWIF 120
           FVQILLQM+  +R  G   FI+LPDLPS     LP+LCFKKSRGL+SRV++S+ + R++F
Sbjct: 76  FVQILLQMLGYIRTKGPCSFIILPDLPSSSD--LPSLCFKKSRGLISRVSESNESERFVF 133

Query: 121 ESARLFESREGEEVAACLCSPRRLDAVALAEGLVEDVDRFVEAMDRISNXXXXXXXXXXX 180
           +S RLF S EGE    C CS   LD+V +AE  + +VDRFVE MD +S+           
Sbjct: 134 DSTRLFGSGEGERAQDCSCSVNSLDSVVMAEEFLTNVDRFVETMDVLSDGAFLRGEESDL 193

Query: 181 XADWVELNWLKSKGYYGVEAFLANRIEVCMRLAWLNSSGGRKRGVKLKEKLNAAGISANV 240
            ++WVEL WLK+KGYY +EAF+ANR+EV MRLAWLN++ G++RG+KLKEKLNAA  +AN 
Sbjct: 194 GSNWVELEWLKAKGYYSMEAFVANRLEVSMRLAWLNTNSGKRRGIKLKEKLNAAAAAANS 253

Query: 241 YWRKKGCVDWWANLDAVTRKKVFTTIIMKAAKSLTSEVLEVAGSASKDEIWLHSTGAEKL 300
           YWRKK CVDWW NLDA T KK++T +  K+AKS+  E+L  A  A + E+WL +  +   
Sbjct: 254 YWRKKACVDWWQNLDAATHKKIWTCLFGKSAKSVIYEILREANQAQQGEMWLFNFASA-- 311

Query: 301 LDYYRPASAQRTIPTFPDDTELGTVITPVTFCTKPAAIARAFNSLFVLLDVKMMLTSTSS 360
               R      +  +F D      ++ P +   KP  +A   + L+VL +   +L     
Sbjct: 312 ----RKGRTDTSAVSFCD-----MILEPNSVPRKPITVASNLSGLYVLQEFASLLILC-- 360

Query: 361 HNSEYDIGKLFFSSLGSVCTISDCILRKMRGFLMVISLD 399
            N    +  +FFSS+G++ T+ DCILRK+RGFLMVIS+D
Sbjct: 361 QNGLVPVHSVFFSSMGTITTLVDCILRKLRGFLMVISID 399


>AT5G53770.1 | Symbols:  | Nucleotidyltransferase family protein |
            chr5:21826733-21829858 FORWARD LENGTH=530
          Length = 530

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 130/326 (39%), Gaps = 79/326 (24%)

Query: 1187 QPPELQSCSATSASLSLMHGM-LHDEIDSFCKQVAAENMARRPYINWAVKRVTRSLQVLW 1245
            + P L+S   +  S S +  + LH EI  FC  +     A +   + AV+ V+  ++ +W
Sbjct: 99   EEPRLESNWFSENSFSKIPMLQLHKEIVDFCDFLLP-TQAEKAERDAAVESVSSVIKYIW 157

Query: 1246 PRSRTNIFGSNATGMSLPTSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARY 1305
            P  +  +FGS  TG+ LPTSD+D+V+            E+G+   + G++      + R 
Sbjct: 158  PSCKVEVFGSYKTGLYLPTSDIDVVIL-----------ESGLTNPQLGLRALSRALSQRG 206

Query: 1306 LANQDWVKTDSLKTVENTAIPIIMLVVEVPLEVITSSAPVIHSLKEEPHCTPGEHVNDSH 1365
            +A        +L  +    +PII  V                                  
Sbjct: 207  IAK-------NLLVIAKARVPIIKFV---------------------------------- 225

Query: 1366 SDSIHLEGSALPKSSEINFYALKESKSVRVDISFKSPSHTGLQTTEMVKVLTEQFPAATP 1425
                        K S I F           D+SF      G +  E ++    + P   P
Sbjct: 226  -----------EKKSNIAF-----------DLSFD--MENGPKAAEFIQDAVSKLPPLRP 261

Query: 1426 LALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFF 1485
            L L+LK FL  R L++ YSGG+ SY L+ ++I FL++          N G LL+ F  F+
Sbjct: 262  LCLILKVFLQQRELNEVYSGGIGSYALLAMLIAFLKYLKDGRSAPEHNLGVLLVKFFDFY 321

Query: 1486 GNVFDPRQMRISVQ-GSGLYIKRERG 1510
            G   +   + IS + G   + K  +G
Sbjct: 322  GRKLNTADVGISCKMGGSFFSKYNKG 347