Miyakogusa Predicted Gene
- Lj0g3v0126639.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0126639.1 tr|A9SZ39|A9SZ39_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_137774,30.85,1e-18,no description,NULL; PUTATIVE
UNCHARACTERIZED PROTEIN,NULL; METHYLTRANSFERASE,NULL;
Methyltransf_11,,CUFF.7618.1
(251 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G16030.1 | Symbols: | S-adenosyl-L-methionine-dependent meth... 225 2e-59
AT4G26730.1 | Symbols: | S-adenosyl-L-methionine-dependent meth... 161 5e-40
AT4G24805.1 | Symbols: | S-adenosyl-L-methionine-dependent meth... 120 6e-28
AT1G24480.1 | Symbols: | S-adenosyl-L-methionine-dependent meth... 110 8e-25
AT5G01710.1 | Symbols: | methyltransferases | chr5:263709-26525... 74 9e-14
AT3G53400.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 53 2e-07
>AT2G16030.1 | Symbols: | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr2:6974196-6974891 REVERSE LENGTH=231
Length = 231
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 142/230 (61%), Gaps = 1/230 (0%)
Query: 20 MDKEIDTFLKKLSFGXXXXXXXXXXXXXXHTPDTCIPTHAPPHPPLRFPKSPCDYPPTRP 79
M++ ++ LK++S TP TCI AP P FP+S CD P R
Sbjct: 1 MERNVEKMLKRVSIVFLSIGTVLMVIMILQTPKTCISPEAPSKPHTHFPRSTCDSSP-RQ 59
Query: 80 HLPLHKKNHRLWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLL 139
HLPL KKN R+WSS AW + ++SFS +NH++ALC+SAGAGH + ALS +
Sbjct: 60 HLPLPKKNARIWSSGAWKSRLYSFSTYFLRFRDLGFIQNHTKALCLSAGAGHALMALSQI 119
Query: 140 GVEDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPG 199
G+ DVT VEL+DS PLV RADPHNLPFFD FD AFTA EALFP +F EMER VR G
Sbjct: 120 GLSDVTAVELVDSIPLVKRADPHNLPFFDGVFDFAFTAHLAEALFPWQFVEEMERTVRRG 179
Query: 200 GACYVLVGECGISEVMEVVRLFRNSKLVSSDKVTLSGMRMTSILMRTRQS 249
G C V V ECG +V ++ RLF NSK+V VTL G + TSIL + + S
Sbjct: 180 GFCVVSVDECGGDDVRDIARLFHNSKVVDVANVTLEGSKKTSILFKVQDS 229
>AT4G26730.1 | Symbols: | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr4:13472579-13473309 FORWARD LENGTH=208
Length = 208
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 109/170 (64%)
Query: 80 HLPLHKKNHRLWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLL 139
HLPL KKN R+W S AW + + SFS +NH++ALC+S GAGH ALS +
Sbjct: 25 HLPLPKKNARIWFSGAWKSRLSSFSTYFLRFRDLGFIQNHTKALCLSDGAGHAPMALSQI 84
Query: 140 GVEDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPG 199
G+ DVT VEL+DS PLV RADPHNLPFFD FD FTA EALFP RF EMER VR G
Sbjct: 85 GLSDVTAVELVDSIPLVKRADPHNLPFFDRVFDFVFTAHLAEALFPWRFVEEMERTVRRG 144
Query: 200 GACYVLVGECGISEVMEVVRLFRNSKLVSSDKVTLSGMRMTSILMRTRQS 249
G C V V EC +V ++ R F NSK+V VTL ++ TSIL + + S
Sbjct: 145 GFCVVAVDECSGDDVRDIARFFHNSKIVDVANVTLERVKRTSILFKLQDS 194
>AT4G24805.1 | Symbols: | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr4:12785315-12786058 FORWARD LENGTH=247
Length = 247
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 10/169 (5%)
Query: 86 KNHRLWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVEDVT 145
K ++W++R W+ V FS N S+AL + A G EVAAL L+GVED
Sbjct: 76 KLRKVWTTRDWDRKVRVFSTFFRRLSDRGLLSNQSKALSIGARVGQEVAALRLIGVEDSV 135
Query: 146 GVELLDSPPLVSRADPHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPGGACYVL 205
G++L+ PPLV + D H PF +E FD F+ FD AL+P +F E+ER ++PGG C +
Sbjct: 136 GIDLVPRPPLVVKGDFHAQPFDEETFDFEFSNVFDHALYPEKFVGEIERTLKPGGVCVLH 195
Query: 206 VGECGISE---------VMEVVRLFRNSKLVSSDKVTLSGMRMTSILMR 245
V G ++ V +V+LF+ SK+V K+ G+ T I+ R
Sbjct: 196 VSISGKTDKYSANDLLSVKPLVKLFKRSKVVEMRKIDGFGLD-TEIVFR 243
>AT1G24480.1 | Symbols: | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein |
chr1:8676440-8677159 REVERSE LENGTH=239
Length = 239
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 90 LWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVEDVTGVEL 149
+W +R W+ + FS S+ LC+ A G EV AL +GV D G++L
Sbjct: 65 IWMTRDWDRKIKVFSRFFQDLKRQGLLSKDSKCLCLGARVGQEVEALKRVGVNDSVGMDL 124
Query: 150 LDSPPLVSRADPHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPGGACYVLVGEC 209
+ PPLV + D H+ PF DE FD F+ FD AL+P +F E+ER +RPGG C + V
Sbjct: 125 VPYPPLVVKGDFHHQPFDDETFDFEFSNVFDHALYPDKFVGEIERTLRPGGLCVLHVALS 184
Query: 210 GISE---------VMEVVRLFRNSKLVSSDKVTLSGMRMTSILMRTRQST 250
S+ V +V+LFR S++V V G+ + + R S+
Sbjct: 185 TRSDKYSANDLFSVEALVKLFRQSEVVHVRNVDGFGLDTEVVFRKKRDSS 234
>AT5G01710.1 | Symbols: | methyltransferases | chr5:263709-265250
REVERSE LENGTH=513
Length = 513
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 90 LWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVEDVTGVEL 149
L+++R W +V +S S+ LCV G EV +L +GV++ G+
Sbjct: 81 LYTTRDWIKSVQFYSSIFQDLIADGYLSPESKTLCVETAIGQEVHSLREIGVKNSVGISK 140
Query: 150 LDSPPLVSRADPHNLPFFDEAFDLAFTA--RFDEALFPARFAAEMERVVRPGGACYVLVG 207
S PLV R + H +PF D AFD F+ R ++L FA E+ R ++P G V VG
Sbjct: 141 KASRPLVVRGEGHAIPFEDNAFDFVFSGGDRLGKSLKQLEFADEITRTLKPEGFAVVHVG 200
Query: 208 ECGISEVMEVVRLFRNSKLV 227
+ LF + +LV
Sbjct: 201 ATDTYSFNSFLDLFNSCRLV 220
>AT3G53400.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: conserved peptide upstream open reading frame 47
(TAIR:AT5G03190.1); Has 285 Blast hits to 285 proteins
in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1;
Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink). | chr3:19798526-19799926 FORWARD
LENGTH=466
Length = 466
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 118 NHSRALCVSAGAGHEVAALSLLGVEDVTGVELLDSPPLVS---RADPHNLPFFDEAFDLA 174
N S+ALC+ + V A++ G+ DV+ + PP+ + R L + D +F
Sbjct: 117 NDSKALCIGRRSVSAVLAMNRQGISDVSVAYM---PPVFAFKHRKFTSELHYEDASFGFV 173
Query: 175 FTARFDEALFPARFAAEMERVVRPGGACYVLVGECGISEVMEVVR-------LFRNSKLV 227
F+ + PA E+ER+++PGG +LVG S+ E+VR L +NS +V
Sbjct: 174 FSMDLESVAVPASLVYEIERILKPGGTGAMLVGTTSGSDSNELVRSVSPVSSLLKNSSVV 233