Miyakogusa Predicted Gene
- Lj0g3v0126189.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0126189.1 Non Chatacterized Hit- tr|I1MV31|I1MV31_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,92.53,0,AIM24,Mitochondrial biogenesis protein AIM24;
TRAP-like,Tryptophan RNA-binding attenuator protein-li,CUFF.7579.1
(314 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47420.1 | Symbols: | Tryptophan RNA-binding attenuator prot... 450 e-127
AT4G17420.1 | Symbols: | Tryptophan RNA-binding attenuator prot... 441 e-124
AT4G17420.3 | Symbols: | Tryptophan RNA-binding attenuator prot... 389 e-108
AT4G17420.2 | Symbols: | Tryptophan RNA-binding attenuator prot... 365 e-101
>AT5G47420.1 | Symbols: | Tryptophan RNA-binding attenuator
protein-like | chr5:19233013-19234838 FORWARD LENGTH=282
Length = 282
Score = 450 bits (1158), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/282 (75%), Positives = 246/282 (87%), Gaps = 1/282 (0%)
Query: 34 MAAPFFSTPFQPYVYQSPQDAIIAFQILGGEAQVVQIMLKPEEKIIAKPGSMCFMSGSIE 93
MAAPFFSTPFQPYVYQS QD I FQILGGE+QVVQIMLK EEK+IAKP SMC+MSGSIE
Sbjct: 1 MAAPFFSTPFQPYVYQSQQDTITPFQILGGESQVVQIMLKSEEKVIAKPASMCYMSGSIE 60
Query: 94 MVNAYLPQNEVGIWQWLFGKSITSILLRNSGPSDGFVGIAAPYFARILPIDLAMFNGEIL 153
M N Y P+ EVG+ QW+ GKS++S++LRN+G +DGFVGIAAPY ARILPIDLAMF GEIL
Sbjct: 61 MENTYTPEQEVGVLQWILGKSVSSVVLRNTGQNDGFVGIAAPYLARILPIDLAMFGGEIL 120
Query: 154 CQPDAFLCSVGDVNISNTVDQRGRNVV-VGAEGFLRQKLTGQGLAFILAGGSVVQKNLEI 212
CQPDAFLCSV DV + N+VDQR RN+V GAEGFLRQ+L+GQGLAFILAGGSVVQK LE+
Sbjct: 121 CQPDAFLCSVHDVKVVNSVDQRARNIVAAGAEGFLRQRLSGQGLAFILAGGSVVQKVLEV 180
Query: 213 GEVLAVDVSCIVAVTSTVNVQIKYNGPARRTMFGGDNVVTALLTGPGMVFIQSLPFQRLS 272
GEV ++DVSCI A+T +++V+IK N P RR +FGGDNVV A LTGPG+VFIQSLPF RLS
Sbjct: 181 GEVFSIDVSCIAALTPSIDVRIKNNAPFRRALFGGDNVVMATLTGPGIVFIQSLPFHRLS 240
Query: 273 QRIARAVTSPNMRENPKFFIQIAVFLFLAYVVIVSSLLLTDV 314
QRIAR+VTSPNMRENPK IQIA+F FLAY VI+SSL+LT+V
Sbjct: 241 QRIARSVTSPNMRENPKLLIQIAIFAFLAYAVILSSLILTEV 282
>AT4G17420.1 | Symbols: | Tryptophan RNA-binding attenuator
protein-like | chr4:9722544-9724443 REVERSE LENGTH=285
Length = 285
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/285 (74%), Positives = 247/285 (86%), Gaps = 4/285 (1%)
Query: 34 MAAPFFSTPFQPYVYQSPQDAIIAFQILGGEAQVVQIMLKPEEKIIAKPGSMCFMSGSIE 93
MAAPFFSTPFQPYVYQS +D I FQILGGEAQVVQIMLKP+EK+IAKPGSMC+MSGSIE
Sbjct: 1 MAAPFFSTPFQPYVYQSQEDTITPFQILGGEAQVVQIMLKPQEKVIAKPGSMCYMSGSIE 60
Query: 94 MVNAYLPQNEVGIWQWLFGKSITSILLRNSGPSDGFVGIAAPYFARILPIDLAMFNGEIL 153
M N Y P+ EVG+ QW+ GKS++SI+LRN+G +DGFVGIAAP ARILP+DLAMF G+IL
Sbjct: 61 MDNTYTPEQEVGVVQWILGKSVSSIVLRNTGQNDGFVGIAAPSLARILPLDLAMFGGDIL 120
Query: 154 CQPDAFLCSVGDVNISNTVDQ--RGRNV-VVGAEGFLRQKLTGQGLAFILAGGSVVQKNL 210
CQPDAFLCSV DV + NTV Q R RN+ GAEG LRQ+L+GQGLAFI+AGGSVVQKNL
Sbjct: 121 CQPDAFLCSVHDVKVVNTVYQRHRARNIAAAGAEGVLRQRLSGQGLAFIIAGGSVVQKNL 180
Query: 211 EIGEVLAVDVSCIVAVTSTVNVQIKYN-GPARRTMFGGDNVVTALLTGPGMVFIQSLPFQ 269
E+GEVL +DVSCI A+T ++N QIKYN P RR +FGGDNVVTA LTGPG+VFIQSLPF
Sbjct: 181 EVGEVLTIDVSCIAALTPSINFQIKYNAAPVRRAVFGGDNVVTATLTGPGIVFIQSLPFH 240
Query: 270 RLSQRIARAVTSPNMRENPKFFIQIAVFLFLAYVVIVSSLLLTDV 314
RLSQRIAR+VTSPNMRENP+ +QI +F+FLAYVVIVSSL+LT++
Sbjct: 241 RLSQRIARSVTSPNMRENPRLLVQIGLFIFLAYVVIVSSLILTEM 285
>AT4G17420.3 | Symbols: | Tryptophan RNA-binding attenuator
protein-like | chr4:9722378-9724443 REVERSE LENGTH=273
Length = 273
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/259 (72%), Positives = 215/259 (83%), Gaps = 8/259 (3%)
Query: 34 MAAPFFSTPFQPYVYQSPQDAIIAFQILGGEAQVVQIMLKPEEKIIAKPGSMCFMSGSIE 93
MAAPFFSTPFQPYVYQS +D I FQILGGEAQVVQIMLKP+EK+IAKPGSMC+MSGSIE
Sbjct: 1 MAAPFFSTPFQPYVYQSQEDTITPFQILGGEAQVVQIMLKPQEKVIAKPGSMCYMSGSIE 60
Query: 94 MVNAYLPQNEVGIWQWLFGKSITSILLRNSGPSDGFVGIAAPYFARILPIDLAMFNGEIL 153
M N Y P+ EVG+ QW+ GKS++SI+LRN+G +DGFVGIAAP ARILP+DLAMF G+IL
Sbjct: 61 MDNTYTPEQEVGVVQWILGKSVSSIVLRNTGQNDGFVGIAAPSLARILPLDLAMFGGDIL 120
Query: 154 CQPDAFLCSVGDVNISNTVDQRGRNVVVGAEGFLRQKLTGQGLAFILAGGSVVQKNLEIG 213
CQPDAFLCSV DV + NTV QR R + A G +GLAFI+AGGSVVQKNLE+G
Sbjct: 121 CQPDAFLCSVHDVKVVNTVYQRHRARNIAAAG-------AEGLAFIIAGGSVVQKNLEVG 173
Query: 214 EVLAVDVSCIVAVTSTVNVQIKYN-GPARRTMFGGDNVVTALLTGPGMVFIQSLPFQRLS 272
EVL +DVSCI A+T ++N QIKYN P RR +FGGDNVVTA LTGPG+VFIQSLPF RLS
Sbjct: 174 EVLTIDVSCIAALTPSINFQIKYNAAPVRRAVFGGDNVVTATLTGPGIVFIQSLPFHRLS 233
Query: 273 QRIARAVTSPNMRENPKFF 291
QRIAR+VTSPNMRENP+
Sbjct: 234 QRIARSVTSPNMRENPRLL 252
>AT4G17420.2 | Symbols: | Tryptophan RNA-binding attenuator
protein-like | chr4:9722378-9724443 REVERSE LENGTH=267
Length = 267
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/245 (72%), Positives = 203/245 (82%), Gaps = 8/245 (3%)
Query: 34 MAAPFFSTPFQPYVYQSPQDAIIAFQILGGEAQVVQIMLKPEEKIIAKPGSMCFMSGSIE 93
MAAPFFSTPFQPYVYQS +D I FQILGGEAQVVQIMLKP+EK+IAKPGSMC+MSGSIE
Sbjct: 1 MAAPFFSTPFQPYVYQSQEDTITPFQILGGEAQVVQIMLKPQEKVIAKPGSMCYMSGSIE 60
Query: 94 MVNAYLPQNEVGIWQWLFGKSITSILLRNSGPSDGFVGIAAPYFARILPIDLAMFNGEIL 153
M N Y P+ EVG+ QW+ GKS++SI+LRN+G +DGFVGIAAP ARILP+DLAMF G+IL
Sbjct: 61 MDNTYTPEQEVGVVQWILGKSVSSIVLRNTGQNDGFVGIAAPSLARILPLDLAMFGGDIL 120
Query: 154 CQPDAFLCSVGDVNISNTVDQRGRNVVVGAEGFLRQKLTGQGLAFILAGGSVVQKNLEIG 213
CQPDAFLCSV DV + NTV QR R + A G +GLAFI+AGGSVVQKNLE+G
Sbjct: 121 CQPDAFLCSVHDVKVVNTVYQRHRARNIAAAG-------AEGLAFIIAGGSVVQKNLEVG 173
Query: 214 EVLAVDVSCIVAVTSTVNVQIKYN-GPARRTMFGGDNVVTALLTGPGMVFIQSLPFQRLS 272
EVL +DVSCI A+T ++N QIKYN P RR +FGGDNVVTA LTGPG+VFIQSLPF RLS
Sbjct: 174 EVLTIDVSCIAALTPSINFQIKYNAAPVRRAVFGGDNVVTATLTGPGIVFIQSLPFHRLS 233
Query: 273 QRIAR 277
QRIAR
Sbjct: 234 QRIAR 238