Miyakogusa Predicted Gene
- Lj0g3v0126049.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0126049.1 Non Chatacterized Hit- tr|I1KP78|I1KP78_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19091 PE,84.94,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
HELICASE_ATP_BIND_1,Helicase, superfamily,CUFF.7630.1
(456 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 634 0.0
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 630 0.0
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 493 e-140
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 489 e-138
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 467 e-132
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 148 9e-36
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 142 5e-34
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 139 3e-33
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 139 3e-33
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 137 1e-32
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 133 3e-31
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 132 3e-31
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 132 3e-31
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 132 3e-31
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 129 3e-30
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 126 3e-29
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 125 7e-29
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 125 9e-29
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 125 9e-29
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 124 1e-28
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 124 1e-28
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 122 7e-28
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 122 7e-28
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 120 1e-27
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 120 2e-27
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 119 3e-27
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 117 1e-26
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 117 1e-26
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 117 1e-26
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 117 2e-26
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 116 3e-26
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 116 3e-26
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 115 9e-26
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 113 2e-25
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 113 3e-25
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 113 3e-25
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 112 4e-25
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 112 5e-25
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 111 9e-25
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 111 9e-25
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 111 1e-24
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 109 3e-24
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 108 6e-24
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 108 1e-23
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 108 1e-23
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 107 2e-23
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 107 2e-23
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 105 9e-23
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 100 2e-21
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 99 7e-21
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 98 1e-20
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 98 1e-20
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 98 1e-20
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 98 1e-20
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 98 1e-20
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 98 1e-20
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 98 1e-20
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 98 1e-20
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 98 1e-20
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 98 1e-20
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 97 2e-20
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 96 6e-20
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 96 7e-20
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 95 8e-20
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 95 1e-19
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 93 4e-19
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 91 2e-18
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 91 2e-18
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 88 1e-17
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 80 2e-15
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 80 3e-15
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 80 3e-15
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 80 4e-15
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 79 5e-15
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 75 1e-13
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 52 8e-07
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 50 3e-06
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 634 bits (1635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/415 (71%), Positives = 354/415 (85%), Gaps = 1/415 (0%)
Query: 43 LPAIETVLKAMSTNTS-QRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGG 101
LPAIETVLKAM++ +V+PI LILCPTRELASQIAAE K LLK H+GIGVQ+L+GG
Sbjct: 384 LPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGG 443
Query: 102 VRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRK 161
RFKLDQ+RL+S+PCQIL+ATPGRLLDH+ENKSG++ RLM L++ ++DEAD LLDLGFR+
Sbjct: 444 TRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRR 503
Query: 162 DIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFL 221
D+EKI+DCLPRQRQS+LFSATIPKEVRR+SQLVLKR+H YIDT+G+G VET +++QS +
Sbjct: 504 DVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCI 563
Query: 222 IAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQ 281
+APHESHF +V H+LKEHI TPDYK+IVFC+ GMVTSLMY +LREMKL V+EIH+RKPQ
Sbjct: 564 VAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQ 623
Query: 282 LYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXX 341
L+RTRVSDEFKES +LILV+SDVS+RGMNYPDVTLV+QVGIP DREQYIH
Sbjct: 624 LHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGK 683
Query: 342 XXXXILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWL 401
+LLIAPWE YFLDE+KDLPL+ IP PD+D K +++ SM KID IKEAAYH WL
Sbjct: 684 GGEGLLLIAPWERYFLDELKDLPLEPIPAPDLDSIVKHQVDQSMAKIDTSIKEAAYHAWL 743
Query: 402 GYYNSIREIGREKTTIADLANRFSESIGLQRPPALFRKTALKMGLKDIPGIRIRR 456
GYYNS+RE GR+KTT+A+LANRF SIGL++PPALFR+TA+KMGLK I GI IR+
Sbjct: 744 GYYNSVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 798
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 630 bits (1624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 293/415 (70%), Positives = 355/415 (85%), Gaps = 1/415 (0%)
Query: 43 LPAIETVLKAMSTNTS-QRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGG 101
LPAIETVLKAM++ +V+PI VLILCPTRELASQIAAE K LLK+H+GIGVQ+L+GG
Sbjct: 431 LPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGG 490
Query: 102 VRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRK 161
RF+LDQ+RL+S+PCQIL+ATPGRLLDH+ENKSG++ RLM L++ ++DEAD LLDLGF++
Sbjct: 491 TRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKR 550
Query: 162 DIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFL 221
D+EKI+DCLPRQRQS+LFSATIPKEVRR+SQLVLKR+H YIDT+G+G VET ++KQS +
Sbjct: 551 DVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCI 610
Query: 222 IAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQ 281
+APHESHF +V H+LKEHI PDYK+IVFC+ GMVTSLMY +LREMKL V+EIH+RKPQ
Sbjct: 611 VAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQ 670
Query: 282 LYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXX 341
L+RT VSDEFKES +LILV+SDVS+RGMNYPDVTLV+QVGIP DREQYIH
Sbjct: 671 LHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGK 730
Query: 342 XXXXILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWL 401
+LLIAPWE YFLDE+KDLPL+ IP PD+D + K +++ SM KID IKEAAYH WL
Sbjct: 731 GGKGLLLIAPWERYFLDELKDLPLEPIPAPDLDSRVKHQVDQSMAKIDTSIKEAAYHAWL 790
Query: 402 GYYNSIREIGREKTTIADLANRFSESIGLQRPPALFRKTALKMGLKDIPGIRIRR 456
GYYNS+RE GR+KTT+A+LANRF SIGL++PPALFR+TA+KMGLK I GI IR+
Sbjct: 791 GYYNSVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 845
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 493 bits (1270), Expect = e-140, Method: Compositional matrix adjust.
Identities = 225/413 (54%), Positives = 309/413 (74%)
Query: 43 LPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGV 102
LPAIE V+K+ + R PI+VL++CPTRELASQ AAEA LLK+H IGVQ ++GG
Sbjct: 438 LPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGT 497
Query: 103 RFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKD 162
+ +Q+R+ ++PCQILVATPGRL DH+EN SG + RLMG+++LVLDEADHLLD+GFR+D
Sbjct: 498 KLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRD 557
Query: 163 IEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLI 222
IE+I+ +P+QRQ+ LFSAT+P+EVR+I + LKR+H++I+ V GS ET ++ Q ++I
Sbjct: 558 IERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMI 617
Query: 223 APHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQL 282
A + HF ++H +LKEHI DYKVI+FCT MVT L+ +L ++ L V+EIHSRKPQ
Sbjct: 618 ASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQS 677
Query: 283 YRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXX 342
YRTRVSDEF++SK +ILV+SDVS+RG++YPDV+LV+Q+G+P DREQYIH
Sbjct: 678 YRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 737
Query: 343 XXXILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLG 402
+LL+APWEEYF+ +KDLP+ K PLP IDP+A +++ + +++ KEAAY WLG
Sbjct: 738 GEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPEAVKRVQKGLSQVEMKNKEAAYQAWLG 797
Query: 403 YYNSIREIGREKTTIADLANRFSESIGLQRPPALFRKTALKMGLKDIPGIRIR 455
YY S + I R+ T + +LAN FS S+GL PPA+ + KMGLK++PG+R +
Sbjct: 798 YYKSQKMIARDTTRLVELANEFSRSMGLDSPPAIPKNVLGKMGLKNVPGLRTK 850
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 489 bits (1260), Expect = e-138, Method: Compositional matrix adjust.
Identities = 228/413 (55%), Positives = 310/413 (75%)
Query: 43 LPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGV 102
LP+IE V+K+ T+ + PIL L++CPTRELA+Q A EA LLK+H IGVQ ++GG
Sbjct: 376 LPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGT 435
Query: 103 RFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKD 162
R L+QKR+ ++PCQILVATPGRL DH+EN G + RL G+++LVLDEADHLLD+GFRKD
Sbjct: 436 RLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKD 495
Query: 163 IEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLI 222
IE+I+ +P++RQ+ LFSAT+P+EVR+I + L+R+H++++ V G++ET Q++Q +I
Sbjct: 496 IERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMI 555
Query: 223 APHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQL 282
A + HF +++ +L+EHI+ DYKVIVFCT MVT L+ +L E+ L V+EIHSRKPQ
Sbjct: 556 ASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQS 615
Query: 283 YRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXX 342
YRTRVS+EF++SK LILV+SDVS+RG++YPDVTLVLQVG+P DREQYIH
Sbjct: 616 YRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKE 675
Query: 343 XXXILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLG 402
ILL+APWEEYFL +KDLP+ K PLP IDP+ K++ ++ ++ KEAAY WLG
Sbjct: 676 GEGILLLAPWEEYFLSSLKDLPITKSPLPSIDPETVKKVQKALCHVEMRNKEAAYQAWLG 735
Query: 403 YYNSIREIGREKTTIADLANRFSESIGLQRPPALFRKTALKMGLKDIPGIRIR 455
YYNS + IGR+K + +LAN FS S+GL PPA+ + KMGLK++PG+R +
Sbjct: 736 YYNSQKMIGRDKDRLVELANEFSRSMGLDNPPAIPKLILGKMGLKNVPGLRAK 788
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 218/412 (52%), Positives = 302/412 (73%)
Query: 43 LPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGV 102
LP+IE V+KA + R PI+VL++CPTRELA Q AAEA +LLK+H IGVQ ++GG
Sbjct: 136 LPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGT 195
Query: 103 RFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKD 162
+ +Q+RL PCQILVATPGRL DH++N SG + RLMG+++LVLDEADHLLD+GFR++
Sbjct: 196 KLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRRE 255
Query: 163 IEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLI 222
IE+I+ +P+QRQ+ LFSAT+ EVR+I + LKR+H++++ V G+ ET ++ Q ++I
Sbjct: 256 IERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMI 315
Query: 223 APHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQL 282
A + HF +++ +LK+HI YKVI+FCT MVT L+ +L ++ L V+EIHSRKPQ
Sbjct: 316 ASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQS 375
Query: 283 YRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXX 342
YRTRVSDEF++SK +ILV+SDVS+RG++YPDV+LV+Q+G+P DREQYIH
Sbjct: 376 YRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 435
Query: 343 XXXILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLG 402
+LL+APWEEYFL +KDLP+ K LP ID +A K++ + +++ KEAAY WLG
Sbjct: 436 GEGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQAWLG 495
Query: 403 YYNSIREIGREKTTIADLANRFSESIGLQRPPALFRKTALKMGLKDIPGIRI 454
YY S ++I R+ T + +LAN FS S+GL PPA+ KMGLK++PGIR+
Sbjct: 496 YYKSQKKIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNVPGIRV 547
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 199/377 (52%), Gaps = 33/377 (8%)
Query: 43 LPAIETVLKAMSTNTSQRVSP---ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLV 99
+PA+E + K +R SP V+++CPTRELA Q A+ LLKHH V ++
Sbjct: 145 IPAVELLFK-------ERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQT-VSMVI 196
Query: 100 GGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGF 159
GG + + +R+ S +++ATPGRLLDH++N + L+ LV+DEAD +L+ F
Sbjct: 197 GGNNRRSEAQRIASG-SNLVIATPGRLLDHLQNTKAFIYK--HLKCLVIDEADRILEENF 253
Query: 160 RKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKRE-HQYIDTVGMGSVETPVQIKQ 218
+D+ KI+ LP+ RQ+ LFSAT +V+ ++++ L H +D G V T ++Q
Sbjct: 254 EEDMNKILKILPKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDD-GRRKV-TNEGLEQ 311
Query: 219 SFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSR 278
+ + P + ++ LK+++ + K++VF + ++++ + V +IH
Sbjct: 312 GYCVVPSKQRLILLISFLKKNL----NKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGG 367
Query: 279 KPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDR-EQYIHXXXXXX 337
Q RT+ +F ++K+ IL+ +DV++RG++ P V ++Q PPD+ +YIH
Sbjct: 368 MDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYD-PPDKPTEYIHRVGRTA 426
Query: 338 XXXXXXXXILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAK--LKIEHSMEKID------ 389
LL+ EE L I+ L K+P+ +++ K ++ ++EK
Sbjct: 427 RGEGAKGKALLVLIPEE--LQFIRYLKAAKVPVKELEFNEKRLSNVQSALEKCVAKDYNL 484
Query: 390 DDIKEAAYHGWLGYYNS 406
+ + + AY +L YNS
Sbjct: 485 NKLAKDAYRAYLSAYNS 501
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 202/405 (49%), Gaps = 38/405 (9%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
VL++CPTRELA Q AK LLK+H V ++GG + K + + L + +LVATPGR
Sbjct: 229 VLVICPTRELAIQSYGVAKELLKYHSQT-VGKVIGGEKRKTEAEIL-AKGVNLLVATPGR 286
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPK 185
LLDH+EN +G + L+ LV+DEAD +L+ F +D++KI++ LP+ RQ+ LFSAT
Sbjct: 287 LLDHLENTNGFIFK--NLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTSLFSATQSA 344
Query: 186 EVRRISQLVLKREHQYIDTVGMGSVE-TPVQIKQSFLIAPHESHFQIVHHILKEHILQTP 244
+V ++++ L YID V G E T ++Q + + P + LK Q
Sbjct: 345 KVEDLARVSLTSP-VYID-VDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKR--FQGK 400
Query: 245 DYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDV 304
++ F TC T ++ R +K EI Q RT +F +++ IL+ ++V
Sbjct: 401 KKIMVFFSTC-KSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNV 459
Query: 305 SSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLI-APWEEYFLDEIKDL 363
++RG+++P V ++Q P + YIH LL+ P E F I+ L
Sbjct: 460 AARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKF---IQYL 516
Query: 364 PLKKIPLPDIDPQAK--LKIEHSMEKIDDD---IKEAAYHGWLGYYNSIREIGREKTTIA 418
KIP+ + + + K L ++ +E + + +KE+A + Y + G + ++
Sbjct: 517 KAAKIPVEEHEFEEKKLLDVKPFVENLISENYALKESAKEAYKTYIS-----GYDSHSMK 571
Query: 419 DLAN-------RFSESIGLQRPPALFRKTALKMGLKDIPGIRIRR 456
D+ N + S G PP K ALK+ D G R +R
Sbjct: 572 DVFNVHQLNLTEVATSFGFSDPP----KVALKI---DRGGYRSKR 609
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 152/277 (54%), Gaps = 21/277 (7%)
Query: 60 RVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQIL 119
R+ P +L+L PTRELA+QI EA K + I L GG K ++ I+
Sbjct: 299 RMGPT-ILVLSPTRELATQIQVEALKFGKSSK-ISCACLYGGAPKGPQLKEIERG-VDIV 355
Query: 120 VATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLF 179
VATPGRL D +E K + L + LVLDEAD +LD+GF I KIV+ +P +RQ++++
Sbjct: 356 VATPGRLNDILEMKR---ISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMY 412
Query: 180 SATIPKEVRRISQLVLKREHQYIDTVGMGSVETPV---QIKQSF-LIAPHESHFQIVHHI 235
+AT PKEVR+I+ +L Q V +G+V+ V I Q+ ++AP E H ++ I
Sbjct: 413 TATWPKEVRKIAADLLVNPAQ----VNIGNVDELVANKSITQTIEVLAPMEKHSRL-EQI 467
Query: 236 LKEHILQTPDYKVIVFCTCG-MVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKES 294
L+ Q P K+I+FC+ M L + R IH K Q R V ++F+
Sbjct: 468 LRS---QEPGSKIIIFCSTKRMCDQLARNLTR--TFGAAAIHGDKSQAERDDVLNQFRSG 522
Query: 295 KQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ +LV++DV++RG++ D+ +V+ P E Y+H
Sbjct: 523 RTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVH 559
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 152/277 (54%), Gaps = 21/277 (7%)
Query: 60 RVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQIL 119
R+ P +L+L PTRELA+QI EA K + I L GG K ++ I+
Sbjct: 231 RMGPT-ILVLSPTRELATQIQVEALKFGKSSK-ISCACLYGGAPKGPQLKEIERG-VDIV 287
Query: 120 VATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLF 179
VATPGRL D +E K + L + LVLDEAD +LD+GF I KIV+ +P +RQ++++
Sbjct: 288 VATPGRLNDILEMKR---ISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMY 344
Query: 180 SATIPKEVRRISQLVLKREHQYIDTVGMGSVETPV---QIKQSF-LIAPHESHFQIVHHI 235
+AT PKEVR+I+ +L Q V +G+V+ V I Q+ ++AP E H ++ I
Sbjct: 345 TATWPKEVRKIAADLLVNPAQ----VNIGNVDELVANKSITQTIEVLAPMEKHSRL-EQI 399
Query: 236 LKEHILQTPDYKVIVFCTCG-MVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKES 294
L+ Q P K+I+FC+ M L + R IH K Q R V ++F+
Sbjct: 400 LRS---QEPGSKIIIFCSTKRMCDQLARNLTR--TFGAAAIHGDKSQAERDDVLNQFRSG 454
Query: 295 KQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ +LV++DV++RG++ D+ +V+ P E Y+H
Sbjct: 455 RTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVH 491
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 200/403 (49%), Gaps = 25/403 (6%)
Query: 59 QRVSP---ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDP 115
+R SP + +I+ PTRELA+Q + K H+ L+GG R +D ++
Sbjct: 136 ERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHK-FSAGLLIGG-REGVDVEKERVHE 193
Query: 116 CQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQ 175
ILV PGRLL H++ LQ+L+LDEAD +LD F+ ++ I+ LP+ RQ
Sbjct: 194 MNILVCAPGRLLQHMDETPNFEC--PQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQ 251
Query: 176 SMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHI 235
++LFSAT K+V+ +++L L R+ +YI TP + Q+ +I P E ++
Sbjct: 252 TLLFSATQTKKVKDLARLSL-RDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSF 310
Query: 236 LKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMK--LKVKEIHSRKPQLYRTRVSDEFKE 293
+K H+ + +++VF + +++ +++ + +K +H + Q R V +F E
Sbjct: 311 IKTHL----NSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIE 366
Query: 294 SKQLILVSSDVSSRGMNYPD-VTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPW 352
+Q +L +DV +RG+++ V V+QV P D YIH +L + P
Sbjct: 367 -RQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPS 425
Query: 353 EEYFLDEIKD--LPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLGYYNSIREI 410
EE ++++++ +P+K I + Q ++ ++ D++ A ++ Y SI +
Sbjct: 426 EEKMIEKLQEAKVPIKLIKANNQKLQEVSRLLAALLVKYPDLQGVAQRAFITYLRSIHK- 484
Query: 411 GREKTTIADLA----NRFSESIGLQRPPALFRKTALKMGLKDI 449
R I D++ FS S+GL P + R T LK K +
Sbjct: 485 -RRDKEIFDVSKLSIENFSASLGLPMTPRI-RFTNLKTKKKGV 525
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 148/277 (53%), Gaps = 21/277 (7%)
Query: 60 RVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQIL 119
R+ P +L+L PTRELA+QI EA V I L GG K Q R I+
Sbjct: 228 RMGPT-ILVLSPTRELATQIQEEA-VKFGRSSRISCTCLYGGAP-KGPQLRDLERGADIV 284
Query: 120 VATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLF 179
VATPGRL D +E + IS+R + LVLDEAD +LD+GF I KIV +P +RQ++++
Sbjct: 285 VATPGRLNDILEMRR-ISLRQ--ISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMY 341
Query: 180 SATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF----LIAPHESHFQIVHHI 235
+AT PK VR+I+ +L Q V +G+V+ V K ++AP E ++ I
Sbjct: 342 TATWPKGVRKIAADLLVNPAQ----VNIGNVDELVANKSITQHIEVVAPMEKQRRL-EQI 396
Query: 236 LKEHILQTPDYKVIVFCTCG-MVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKES 294
L+ Q P KVI+FC+ M L + R+ IH K Q R V ++F+
Sbjct: 397 LRS---QEPGSKVIIFCSTKRMCDQLTRNLTRQ--FGAAAIHGDKSQPERDNVLNQFRSG 451
Query: 295 KQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ +LV++DV++RG++ D+ V+ P E Y+H
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 148/277 (53%), Gaps = 21/277 (7%)
Query: 60 RVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQIL 119
R+ P +L+L PTRELA+QI EA V I L GG K Q R I+
Sbjct: 228 RMGPT-ILVLSPTRELATQIQEEA-VKFGRSSRISCTCLYGGAP-KGPQLRDLERGADIV 284
Query: 120 VATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLF 179
VATPGRL D +E + IS+R + LVLDEAD +LD+GF I KIV +P +RQ++++
Sbjct: 285 VATPGRLNDILEMRR-ISLRQ--ISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMY 341
Query: 180 SATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF----LIAPHESHFQIVHHI 235
+AT PK VR+I+ +L Q V +G+V+ V K ++AP E ++ I
Sbjct: 342 TATWPKGVRKIAADLLVNPAQ----VNIGNVDELVANKSITQHIEVVAPMEKQRRL-EQI 396
Query: 236 LKEHILQTPDYKVIVFCTCG-MVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKES 294
L+ Q P KVI+FC+ M L + R+ IH K Q R V ++F+
Sbjct: 397 LRS---QEPGSKVIIFCSTKRMCDQLTRNLTRQ--FGAAAIHGDKSQPERDNVLNQFRSG 451
Query: 295 KQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ +LV++DV++RG++ D+ V+ P E Y+H
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 148/277 (53%), Gaps = 21/277 (7%)
Query: 60 RVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQIL 119
R+ P +L+L PTRELA+QI EA V I L GG K Q R I+
Sbjct: 228 RMGPT-ILVLSPTRELATQIQEEA-VKFGRSSRISCTCLYGGAP-KGPQLRDLERGADIV 284
Query: 120 VATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLF 179
VATPGRL D +E + IS+R + LVLDEAD +LD+GF I KIV +P +RQ++++
Sbjct: 285 VATPGRLNDILEMRR-ISLRQ--ISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMY 341
Query: 180 SATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF----LIAPHESHFQIVHHI 235
+AT PK VR+I+ +L Q V +G+V+ V K ++AP E ++ I
Sbjct: 342 TATWPKGVRKIAADLLVNPAQ----VNIGNVDELVANKSITQHIEVVAPMEKQRRL-EQI 396
Query: 236 LKEHILQTPDYKVIVFCTCG-MVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKES 294
L+ Q P KVI+FC+ M L + R+ IH K Q R V ++F+
Sbjct: 397 LRS---QEPGSKVIIFCSTKRMCDQLTRNLTRQ--FGAAAIHGDKSQPERDNVLNQFRSG 451
Query: 295 KQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ +LV++DV++RG++ D+ V+ P E Y+H
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 148/277 (53%), Gaps = 21/277 (7%)
Query: 60 RVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQIL 119
R+ P +L+L PTRELA+QI EA V I L GG K Q R I+
Sbjct: 228 RMGPT-ILVLSPTRELATQIQEEA-VKFGRSSRISCTCLYGGAP-KGPQLRDLERGADIV 284
Query: 120 VATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLF 179
VATPGRL D +E + IS+R + LVLDEAD +LD+GF I KIV +P +RQ++++
Sbjct: 285 VATPGRLNDILEMRR-ISLRQ--ISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMY 341
Query: 180 SATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF----LIAPHESHFQIVHHI 235
+AT PK VR+I+ +L Q V +G+V+ V K ++AP E ++ I
Sbjct: 342 TATWPKGVRKIAADLLVNPAQ----VNIGNVDELVANKSITQHIEVVAPMEKQRRL-EQI 396
Query: 236 LKEHILQTPDYKVIVFCTCG-MVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKES 294
L+ Q P KVI+FC+ M L + R+ IH K Q R V ++F+
Sbjct: 397 LRS---QEPGSKVIIFCSTKRMCDQLTRNLTRQ--FGAAAIHGDKSQPERDNVLNQFRSG 451
Query: 295 KQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ +LV++DV++RG++ D+ V+ P E Y+H
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 155/306 (50%), Gaps = 11/306 (3%)
Query: 64 ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATP 123
+L PTRELA QIA + + L + LVGG+ L P ++VATP
Sbjct: 90 FFACVLSPTRELAIQIAEQFEAL-GADISLRCAVLVGGIDRMQQTIALGKRP-HVIVATP 147
Query: 124 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATI 183
GRL DH+ + G S L L+ LVLDEAD LL+ F K + +I++ +P +R++ LFSAT+
Sbjct: 148 GRLWDHMSDTKGFS--LKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLFSATM 205
Query: 184 PKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQT 243
K+VR++ + L+ + +V+T Q + F+ A ++ + + +IL E
Sbjct: 206 TKKVRKLQRACLRNPVKIEAASKYSTVDTLKQ-QYRFVAAKYKDCYLV--YILSE----M 258
Query: 244 PDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSD 303
P+ ++F T + VLR + + I + Q R ++FK + ILV +D
Sbjct: 259 PESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTD 318
Query: 304 VSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPWEEYFLDEIKDL 363
V+SRG++ P V +V+ IP + + YIH I L+ +E + +I+ L
Sbjct: 319 VASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKL 378
Query: 364 PLKKIP 369
KK+P
Sbjct: 379 IGKKLP 384
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 141/270 (52%), Gaps = 18/270 (6%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
VLIL PTRELA+QI EA + I L GG K L+ I+VATPGR
Sbjct: 510 VLILAPTRELATQIQDEA-LRFGRSSRISCTCLYGGAPKGPQLKELERG-ADIVVATPGR 567
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPK 185
L D +E K + + +LVLDEAD +LD+GF I KIV+ +P +RQ+++++AT PK
Sbjct: 568 LNDILEMKM---IDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPK 624
Query: 186 EVRRISQLVLKREHQYIDTVGMGSVE---TPVQIKQSFLIAPHESHFQIVHHILKEHILQ 242
EVR+I+ +L Q V +G V+ I Q + P + + IL+ Q
Sbjct: 625 EVRKIASDLLVNPVQ----VNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRS---Q 677
Query: 243 TPDYKVIVFCTCG-MVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVS 301
KVI+FC+ + L V R V IH K Q R V ++F+ K +L++
Sbjct: 678 ERGSKVIIFCSTKRLCDHLARSVGRHFGAVV--IHGDKTQGERDWVLNQFRSGKSCVLIA 735
Query: 302 SDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+DV++RG++ D+ +V+ P E Y+H
Sbjct: 736 TDVAARGLDIKDIRVVINYDFPTGVEDYVH 765
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 151/291 (51%), Gaps = 14/291 (4%)
Query: 43 LPAIETVLKAMSTNTSQRVSPIL--VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVG 100
+P I+ + + T+ R S L L+L PTRELA Q+ E K + + V G
Sbjct: 65 IPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCV---YG 121
Query: 101 GVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFR 160
GV + + Q L + ++V TPGR++D +E G S++L ++ LVLDEAD +L +GF
Sbjct: 122 GVSYTIQQSAL-TRGVDVVVGTPGRIIDLIE---GRSLKLGEVEYLVLDEADQMLAVGFE 177
Query: 161 KDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF 220
+ +E I++ LP +RQSMLFSAT+P V+++++ L ID VG + IK
Sbjct: 178 EAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLN-IDLVGDQDEKLAEGIKLYA 236
Query: 221 LIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKP 280
+ S I+ ++ + K IVF + L + + +H
Sbjct: 237 IATTSTSKRTILSDLI---TVYAKGGKTIVFTQTKRDADEVSLALSN-SIATEALHGDIS 292
Query: 281 QLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
Q R R + F++ K +LV++DV+SRG++ P+V LV+ +P D E ++H
Sbjct: 293 QHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 343
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 151/291 (51%), Gaps = 14/291 (4%)
Query: 43 LPAIETVLKAMSTNTSQRVSPIL--VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVG 100
+P I+ + + T+ R S L L+L PTRELA Q+ E K + + V G
Sbjct: 158 IPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCV---YG 214
Query: 101 GVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFR 160
GV + + Q L + ++V TPGR++D +E G S++L ++ LVLDEAD +L +GF
Sbjct: 215 GVSYTIQQSAL-TRGVDVVVGTPGRIIDLIE---GRSLKLGEVEYLVLDEADQMLAVGFE 270
Query: 161 KDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF 220
+ +E I++ LP +RQSMLFSAT+P V+++++ L ID VG + IK
Sbjct: 271 EAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLN-IDLVGDQDEKLAEGIKLYA 329
Query: 221 LIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKP 280
+ S I+ ++ + K IVF + L + + +H
Sbjct: 330 IATTSTSKRTILSDLI---TVYAKGGKTIVFTQTKRDADEVSLALSN-SIATEALHGDIS 385
Query: 281 QLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
Q R R + F++ K +LV++DV+SRG++ P+V LV+ +P D E ++H
Sbjct: 386 QHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 436
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 151/291 (51%), Gaps = 14/291 (4%)
Query: 43 LPAIETVLKAMSTNTSQRVSPIL--VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVG 100
+P I+ + + T+ R S L L+L PTRELA Q+ E K + + V G
Sbjct: 158 IPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCV---YG 214
Query: 101 GVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFR 160
GV + + Q L + ++V TPGR++D +E G S++L ++ LVLDEAD +L +GF
Sbjct: 215 GVSYTIQQSAL-TRGVDVVVGTPGRIIDLIE---GRSLKLGEVEYLVLDEADQMLAVGFE 270
Query: 161 KDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF 220
+ +E I++ LP +RQSMLFSAT+P V+++++ L ID VG + IK
Sbjct: 271 EAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLN-IDLVGDQDEKLAEGIKLYA 329
Query: 221 LIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKP 280
+ S I+ ++ + K IVF + L + + +H
Sbjct: 330 IATTSTSKRTILSDLI---TVYAKGGKTIVFTQTKRDADEVSLALSN-SIATEALHGDIS 385
Query: 281 QLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
Q R R + F++ K +LV++DV+SRG++ P+V LV+ +P D E ++H
Sbjct: 386 QHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 436
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 153/304 (50%), Gaps = 17/304 (5%)
Query: 36 TDAKCKQLPAIETVLK---AMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEG 92
T A C P I ++K S+ V P L +IL PTRELASQI EAK + G
Sbjct: 210 TAAFC--FPIISGIMKDQHVQRPRGSRTVYP-LAVILSPTRELASQIHDEAKKF-SYQTG 265
Query: 93 IGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEAD 152
+ V GG + L+ ILVATPGRL D +E ++ +S+++ ++ L LDEAD
Sbjct: 266 VKVVVAYGGTPINQQLRELERG-VDILVATPGRLNDLLE-RARVSMQM--IRFLALDEAD 321
Query: 153 HLLDLGFRKDIEKIV---DCLPRQ-RQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMG 208
+LD+GF I KIV D PR RQ++LFSAT P+E++R++ L + ++ +G
Sbjct: 322 RMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLA-NYIFLAVGRVG 380
Query: 209 S-VETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLRE 267
S + VQ + L + SH + H +E+ +Q +VF + L
Sbjct: 381 SSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCI 440
Query: 268 MKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDRE 327
IH + Q R FK + ILV++DV++RG++ P V V+ +P D +
Sbjct: 441 NGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDID 500
Query: 328 QYIH 331
Y+H
Sbjct: 501 DYVH 504
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 139/268 (51%), Gaps = 6/268 (2%)
Query: 64 ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATP 123
+ L++ PTRELA Q+A + K L + +VGG+ L S P I++ TP
Sbjct: 127 VFALVVTPTRELAFQLAEQFKAL-GSCLNLRCSVIVGGMDMLTQTMSLVSRP-HIVITTP 184
Query: 124 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATI 183
GR+ +EN + + LVLDEAD +LD+GF+ ++ I CLP+ RQ++LFSAT+
Sbjct: 185 GRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATM 244
Query: 184 PKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQT 243
++ + + + + Y G+ +V+T + Q F+ ++ + HIL + +
Sbjct: 245 TSNLQALLEHSSNKAYFYEAYEGLKTVDT---LTQQFIFEDKDAKELYLVHILSQMEDKG 301
Query: 244 PDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSD 303
+I TC L +L E++++ +HS Q R +FK K IL+++D
Sbjct: 302 IRSAMIFVSTCRTCQRLSL-MLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATD 360
Query: 304 VSSRGMNYPDVTLVLQVGIPPDREQYIH 331
V+SRG++ P V LV+ IP D Y+H
Sbjct: 361 VASRGLDIPTVDLVINYDIPRDPRDYVH 388
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 137/267 (51%), Gaps = 10/267 (3%)
Query: 65 LVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPG 124
+VLIL PTRELA QI E++ G+ + GG K Q R +I++ATPG
Sbjct: 240 IVLILAPTRELAVQIQEESRKF-GLRSGVRSTCIYGGAP-KGPQIRDLRRGVEIVIATPG 297
Query: 125 RLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIP 184
RL+D +E + L + LVLDEAD +LD+GF I KIV + RQ++L+SAT P
Sbjct: 298 RLIDMLECQH---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWP 354
Query: 185 KEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTP 244
+EV +++ L+ ++ I +G ++ I Q I P + + +LK+ + +
Sbjct: 355 REVETLARQFLRDPYKAI--IGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGS- 411
Query: 245 DYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDV 304
K+++F + + LR IH K Q R RV EFK + I+ ++DV
Sbjct: 412 --KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDV 469
Query: 305 SSRGMNYPDVTLVLQVGIPPDREQYIH 331
++RG++ D+ V+ P E YIH
Sbjct: 470 AARGLDVKDIKCVVNYDFPNTLEDYIH 496
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 150/290 (51%), Gaps = 16/290 (5%)
Query: 43 LPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGV 102
+P I+ ++K + + R +P L L+L PTRELA Q+ E + + I L GG
Sbjct: 160 IPIIDKIIKYNAKHGRGR-NP-LCLVLAPTRELARQVEKEFRESAPSLDTI---CLYGGT 214
Query: 103 RFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKD 162
++LD + V TPGR++D ++ + + L +Q +VLDEAD +L +GF +D
Sbjct: 215 PIGQQMRQLDYG-VDVAVGTPGRVIDLMKRGA---LNLSEVQFVVLDEADQMLQVGFAED 270
Query: 163 IEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLI 222
+E I++ LP +RQSM+FSAT+P +R +++ L +D VG + I +I
Sbjct: 271 VEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLT-VDLVGDSDQKLADGITTYSII 329
Query: 223 APHESHFQIVHHILKEHILQTPDYKVIVFC-TCGMVTSLMYQVLREMKLKVKEIHSRKPQ 281
A I+ ++ EH K IVF T L Y + R K + +H Q
Sbjct: 330 ADSYGRASIIGPLVTEH---AKGGKCIVFTQTKRDADRLSYALARSFKCEA--LHGDISQ 384
Query: 282 LYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
R R F++ ILV++DV++RG++ P+V L++ +P + E ++H
Sbjct: 385 SQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVH 434
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 161/332 (48%), Gaps = 16/332 (4%)
Query: 43 LPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGV 102
LP IE + + S + + ++ +I+ PTREL++QI A+ + + LVGG
Sbjct: 72 LPFIEIIRR--SNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGR 129
Query: 103 RFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKD 162
+ D L+ + +L+ TPGRL D ++ + R L++L+LDEAD LLD+GF+K
Sbjct: 130 EVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFR--NLEILILDEADRLLDMGFQKQ 187
Query: 163 IEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLI 222
+ I+ LP+QR++ LFSAT + V +++ L+ + I S + +
Sbjct: 188 VNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKC 247
Query: 223 APHESHFQIVHHILKEHILQTPDYKVIVF---CTCGMVTSLMYQVLREMK-LKVKEIHSR 278
+ Q+VH +++ + K++VF C C L+ + +K + H +
Sbjct: 248 EADQKSSQLVH-----LLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGK 302
Query: 279 KPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXX 338
Q R F E+ +L+ +DV++RG++ P + V+Q P D + +IH
Sbjct: 303 MDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTAR 362
Query: 339 XXXXXXXILLIAPWEEYFLDEIKDLPLKKIPL 370
I+ + P E D ++ + ++++PL
Sbjct: 363 MERQGRAIVFLMPKE---TDYVEFMRIRRVPL 391
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 135/267 (50%), Gaps = 10/267 (3%)
Query: 65 LVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPG 124
+VL+L PTRELA QI EA + I + GGV K Q R +I++ATPG
Sbjct: 174 IVLVLAPTRELAVQIQQEASKFGSSSK-IKTTCIYGGVP-KGPQVRDLQKGVEIVIATPG 231
Query: 125 RLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIP 184
RL+D +E+ + L + LVLDEAD +LD+GF I KIV + RQ++ +SAT P
Sbjct: 232 RLIDMMESNN---TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWP 288
Query: 185 KEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTP 244
KEV ++S+ L ++ I +G ++ I+Q + + + +L E I+
Sbjct: 289 KEVEQLSKKFLYNPYKVI--IGSSDLKANRAIRQIVDVISESQKYNKLVKLL-EDIMDGS 345
Query: 245 DYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDV 304
+++VF + + LR IH K Q R V EF+ K I+ ++DV
Sbjct: 346 --RILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDV 403
Query: 305 SSRGMNYPDVTLVLQVGIPPDREQYIH 331
++RG++ DV V+ P E Y+H
Sbjct: 404 AARGLDVKDVKYVINYDFPGSLEDYVH 430
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 163/328 (49%), Gaps = 19/328 (5%)
Query: 54 STNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDS 113
ST+ + ++ +I+ PTREL++QI A+ + + LVGG K D K ++
Sbjct: 81 STSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEE 140
Query: 114 DPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQ 173
+ C +L+ TPGRL D +E + R L++L+LDEAD LL++GF++ + I+ LP+Q
Sbjct: 141 EGCNVLIGTPGRLSDIMERMEILDFR--NLEILILDEADRLLEMGFQRQVNYIISRLPKQ 198
Query: 174 RQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVH 233
R++ LFSAT + V +++ L R ++ E+ Q+ S P H + +
Sbjct: 199 RRTGLFSATQTEGVEELAKAGL-RNPVRVEVRAKSKSESSQQLTNS--KTPSGLHLEYME 255
Query: 234 -------HILKEHILQTPDYKVIV-FCTCGMVT--SLMYQVLREMK-LKVKEIHSRKPQL 282
L + +++ D K+IV F TC V L+ + +K + + IH Q
Sbjct: 256 CEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQN 315
Query: 283 YRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXX 342
R + F ++ L+ +DV++RG++ P + V+Q P D + H
Sbjct: 316 ARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQ 375
Query: 343 XXXILLIAPWEEYFLDEIKDLPLKKIPL 370
I+ + P EE +++ ++ ++++PL
Sbjct: 376 GRAIVFLLPKEEAYVEFMR---IRRVPL 400
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 149/304 (49%), Gaps = 19/304 (6%)
Query: 36 TDAKCKQLPAIETVLKAMSTN---TSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEG 92
T A C P I ++K S+ V P V IL PTRELA QI EAK + G
Sbjct: 202 TAAFC--FPIISGIMKDQHVERPRGSRAVYPFAV-ILSPTRELACQIHDEAK-KFSYQTG 257
Query: 93 IGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEAD 152
+ V GG + L+ C ILVATPGRL D +E ++ +S+++ ++ L LDEAD
Sbjct: 258 VKVVVAYGGTPIHQQLRELERG-CDILVATPGRLNDLLE-RARVSMQM--IRFLALDEAD 313
Query: 153 HLLDLGFRKDIEKIV---DCLPRQ-RQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMG 208
+LD+GF I KIV D PR RQ+MLFSAT P +++R++ + + ++ +G
Sbjct: 314 RMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMS-NYIFLAVGRVG 372
Query: 209 SVETPVQIKQSFLI-APHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLRE 267
S + + F+ + SH + H +E Q +VF + L
Sbjct: 373 SSTDLITQRVEFVQESDKRSHLMDLLHAQRE--TQDKQSLTLVFVETKRGADTLENWLCM 430
Query: 268 MKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDRE 327
+ IH + Q R FK + ILV++DV++RG++ P V V+ +P D +
Sbjct: 431 NEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDID 490
Query: 328 QYIH 331
Y+H
Sbjct: 491 DYVH 494
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 149/304 (49%), Gaps = 19/304 (6%)
Query: 36 TDAKCKQLPAIETVLKAMSTN---TSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEG 92
T A C P I ++K S+ V P V IL PTRELA QI EAK + G
Sbjct: 202 TAAFC--FPIISGIMKDQHVERPRGSRAVYPFAV-ILSPTRELACQIHDEAK-KFSYQTG 257
Query: 93 IGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEAD 152
+ V GG + L+ C ILVATPGRL D +E ++ +S+++ ++ L LDEAD
Sbjct: 258 VKVVVAYGGTPIHQQLRELERG-CDILVATPGRLNDLLE-RARVSMQM--IRFLALDEAD 313
Query: 153 HLLDLGFRKDIEKIV---DCLPRQ-RQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMG 208
+LD+GF I KIV D PR RQ+MLFSAT P +++R++ + + ++ +G
Sbjct: 314 RMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMS-NYIFLAVGRVG 372
Query: 209 SVETPVQIKQSFLI-APHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLRE 267
S + + F+ + SH + H +E Q +VF + L
Sbjct: 373 SSTDLITQRVEFVQESDKRSHLMDLLHAQRE--TQDKQSLTLVFVETKRGADTLENWLCM 430
Query: 268 MKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDRE 327
+ IH + Q R FK + ILV++DV++RG++ P V V+ +P D +
Sbjct: 431 NEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDID 490
Query: 328 QYIH 331
Y+H
Sbjct: 491 DYVH 494
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 149/304 (49%), Gaps = 19/304 (6%)
Query: 36 TDAKCKQLPAIETVLKAMSTN---TSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEG 92
T A C P I ++K S+ V P V IL PTRELA QI EAK + G
Sbjct: 202 TAAFC--FPIISGIMKDQHVERPRGSRAVYPFAV-ILSPTRELACQIHDEAK-KFSYQTG 257
Query: 93 IGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEAD 152
+ V GG + L+ C ILVATPGRL D +E ++ +S+++ ++ L LDEAD
Sbjct: 258 VKVVVAYGGTPIHQQLRELERG-CDILVATPGRLNDLLE-RARVSMQM--IRFLALDEAD 313
Query: 153 HLLDLGFRKDIEKIV---DCLPRQ-RQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMG 208
+LD+GF I KIV D PR RQ+MLFSAT P +++R++ + + ++ +G
Sbjct: 314 RMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMS-NYIFLAVGRVG 372
Query: 209 SVETPVQIKQSFLI-APHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLRE 267
S + + F+ + SH + H +E Q +VF + L
Sbjct: 373 SSTDLITQRVEFVQESDKRSHLMDLLHAQRE--TQDKQSLTLVFVETKRGADTLENWLCM 430
Query: 268 MKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDRE 327
+ IH + Q R FK + ILV++DV++RG++ P V V+ +P D +
Sbjct: 431 NEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDID 490
Query: 328 QYIH 331
Y+H
Sbjct: 491 DYVH 494
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 15/303 (4%)
Query: 36 TDAKCKQLPAIETVLKAMSTNTSQRVSPI--LVLILCPTRELASQIAAEAKVLLKHHEGI 93
T A C P I ++K + V + L +IL PTRELA QI EA+ + G+
Sbjct: 197 TAAFC--FPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEAR-KFSYQTGV 253
Query: 94 GVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADH 153
V GG + L+ ILVATPGRL D +E V L ++ L LDEAD
Sbjct: 254 KVVVAYGGTPVNQQIRELERG-VDILVATPGRLNDLLERGR---VSLQMVRFLALDEADR 309
Query: 154 LLDLGFRKDIEKIVDCL----PRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGS 209
+LD+GF I KIV + P RQ+MLFSAT P+E++R++ L + ++ +GS
Sbjct: 310 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLS-NYIFLAVGRVGS 368
Query: 210 VETPVQIKQSFL-IAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREM 268
+ + F+ + SH + H +E+ Q +VF + L
Sbjct: 369 STDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCIN 428
Query: 269 KLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQ 328
IH + Q R FK + ILV++DV++RG++ P V V+ +P D +
Sbjct: 429 GFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 488
Query: 329 YIH 331
Y+H
Sbjct: 489 YVH 491
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 142/270 (52%), Gaps = 18/270 (6%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQS--LVGGVRFKLDQKRLDSDPCQILVATP 123
VL+L PTRELA Q+AA+ + +G+ S L GG + + + +L I+V TP
Sbjct: 177 VLVLLPTRELAKQVAADFDA---YGGSLGLSSCCLYGGDSYPVQEGKLKRG-VDIVVGTP 232
Query: 124 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCL--PRQRQSMLFSA 181
GR+ DH+E ++ + LQ VLDEAD +L +GF +D+E I+ + + Q++LFSA
Sbjct: 233 GRIKDHIERQN---LDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFSA 289
Query: 182 TIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHIL 241
T+P V+ IS LKR+ + ID VG ++ ++ + + +++ I+ +
Sbjct: 290 TLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISCY-- 347
Query: 242 QTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVS 301
+ + I+F + S + +L + +H PQ R F+ K LV+
Sbjct: 348 -SSGGQTIIFAETKVQVSELSGLLD----GSRALHGEIPQSQREVTLAGFRNGKFATLVA 402
Query: 302 SDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
++V++RG++ DV L++Q P + E YIH
Sbjct: 403 TNVAARGLDINDVQLIIQCEPPREVEAYIH 432
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 43 LPAIETVLKAMS--TNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSL-V 99
+PAI VLK S++V+P L+L PTRELA QI+ VL + E G++S+ V
Sbjct: 170 IPAIMHVLKKNKKIGGGSKKVNPT-CLVLSPTRELAVQIS---DVLREAGEPCGLKSICV 225
Query: 100 GGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGF 159
G K Q I++ TPGRL D +E+ +RL + +VLDEAD +LD+GF
Sbjct: 226 YGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNV---LRLSDVSFVVLDEADRMLDMGF 282
Query: 160 RKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYID----TVGMGSVETPVQ 215
+ + I+ + RQ ++FSAT P +V +++Q +++D V +GSV+
Sbjct: 283 EEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQ-------EFMDPNPIKVIIGSVDLAAN 335
Query: 216 --IKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVK 273
+ Q + + Q + +L E ++ +V+VF + + + L++ K
Sbjct: 336 HDVMQIIEVLDERARDQRLIALL-EKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAV 394
Query: 274 EIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
IH K Q RTR FKE +LV++DV++RG++ PDV +V+ P E Y+H
Sbjct: 395 SIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVH 452
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 135/266 (50%), Gaps = 14/266 (5%)
Query: 67 LILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRL 126
L+L PTRELA Q+ E + + I L GG + L+ + V TPGR+
Sbjct: 194 LVLAPTRELARQVEKEFRESAPSLDTI---CLYGGTPIGQQMRELNYG-IDVAVGTPGRI 249
Query: 127 LDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKE 186
+D ++ + + L +Q +VLDEAD +L +GF +D+E I+ LP +RQSM+FSAT+P
Sbjct: 250 IDLMKRGA---LNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSW 306
Query: 187 VRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDY 246
+R +++ L ID VG + I + A I+ ++KEH
Sbjct: 307 IRSLTKKYLNNPLT-IDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEH---GKGG 362
Query: 247 KVIVFC-TCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVS 305
K IVF T L + + + K + +H Q R R F++ ILV++DV+
Sbjct: 363 KCIVFTQTKRDADRLAFGLAKSYKCEA--LHGDISQAQRERTLAGFRDGNFSILVATDVA 420
Query: 306 SRGMNYPDVTLVLQVGIPPDREQYIH 331
+RG++ P+V LV+ +P + E ++H
Sbjct: 421 ARGLDVPNVDLVIHYELPNNTETFVH 446
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 146/277 (52%), Gaps = 16/277 (5%)
Query: 59 QRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQI 118
+RV VLIL PTRELA QI + + L + + I +VGG+ + + L S P I
Sbjct: 234 KRVFATRVLILTPTRELAVQIHSMIQNLAQFTD-IKCGLIVGGLSVREQEVVLRSMP-DI 291
Query: 119 LVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSML 178
+VATPGR++DH+ N +SV L L +L+LDEAD LL GF +I ++V P++RQ+ML
Sbjct: 292 VVATPGRMIDHLRN--SMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTML 349
Query: 179 FSATIPKEVRRISQLVLKREHQYIDTVGM----GSVETPVQIKQSFLIAPHESHFQIVHH 234
FSAT+ +EV+ + +L L + + G E V+I+++ E++ + V
Sbjct: 350 FSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRT-----REANQEAV-- 402
Query: 235 ILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKES 294
L +T KVI+F + + LK E+H Q R + F++
Sbjct: 403 -LLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQ 461
Query: 295 KQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ L+++DV++RG++ V V+ P + + Y+H
Sbjct: 462 EVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVH 498
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 136/289 (47%), Gaps = 27/289 (9%)
Query: 52 AMSTNTSQRVSP----ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLD 107
A T +++ P I +IL PTRELA Q + K L K+ + I V GG + D
Sbjct: 207 AFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVCKELSKYLK-IEVMVTTGGTSLRDD 265
Query: 108 QKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIV 167
RL P +LV TPGR+LD K G+ V L MLV+DEAD LL + F+ IE+++
Sbjct: 266 IMRL-YQPVHLLVGTPGRILDLA--KKGVCV-LKDCAMLVMDEADKLLSVEFQPSIEELI 321
Query: 168 DCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHES 227
LP RQ ++FSAT P V+ LK+ YI + + +
Sbjct: 322 QFLPESRQILMFSATFPVTVKSFKDRYLKKP--YI-----------INLMDQLTLMGVTQ 368
Query: 228 HFQIVHHILKEHILQTPDYKV-----IVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQL 282
++ V K H L T K+ I+FC L+ + + E+ IH++ Q
Sbjct: 369 YYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQD 428
Query: 283 YRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+R RV +F+ LV +D+ +RG++ V +V+ P E Y+H
Sbjct: 429 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLH 477
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 29/283 (10%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
+++ PTRELA QI E V H+ G V S+VGG + +Q + C+I++ATPGR
Sbjct: 392 AVVMAPTRELAQQIEEET-VKFAHYLGFRVTSIVGGQSIE-EQGLKITQGCEIVIATPGR 449
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQ------------ 173
L+D +E + + L +VLDEAD ++D+GF + ++D +P
Sbjct: 450 LIDCLERRYAV---LNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELD 506
Query: 174 -----RQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESH 228
R + +FSAT+P V R+++ L+ + + T+G T + I Q ++
Sbjct: 507 EKKIYRTTYMFSATMPPGVERLARKYLR--NPVVVTIGTAGKTTDL-ISQHVIMMKESEK 563
Query: 229 FQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVS 288
F + +L E +T IVF + + L + +V +H K Q R
Sbjct: 564 FFRLQKLLDELGEKT----AIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISL 619
Query: 289 DEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ F+ + +LV++DV RG++ PDV V+ +P E Y H
Sbjct: 620 EGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTH 662
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 171/402 (42%), Gaps = 92/402 (22%)
Query: 60 RVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQIL 119
R L++ PTREL Q+ + LL I ++GG + ++ RL IL
Sbjct: 101 RSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKG-ISIL 159
Query: 120 VATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIV------------ 167
+ATPGRLLDH++N + + L+ ++ DEAD +L+LG+ K+IE+I+
Sbjct: 160 IATPGRLLDHLKNTASFVHK--NLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGE 217
Query: 168 --DCLPR--QRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMG----------SVETP 213
D +P+ Q+Q++L SAT+ +V +++L L D V +G S+E+P
Sbjct: 218 EDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLD------DPVMIGLDNTKLQQNLSIESP 271
Query: 214 V----------------------------QIKQSFLIAPHESHFQIVHHILKEHILQTPD 245
Q+ Q +L P + + +LK +
Sbjct: 272 AAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKNLFEREAS 331
Query: 246 YKVIVFCTCGMVTSLMYQVLRE------------------MKLKVKEIHSRKPQLYRTRV 287
KV+VF + Y +L E +K K +H Q R
Sbjct: 332 QKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSMEQEDRRSA 391
Query: 288 SDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXIL 347
FK KQ +L+S+DV++RG+++P V ++Q P + +Y+H +L
Sbjct: 392 FGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEALL 451
Query: 348 LIAPWEEYFLDEIK-------DLPLKKI----PLPDIDPQAK 378
+ P E +L E+K + PL K+ P+P P+ K
Sbjct: 452 FLQPIEIDYLKELKKHGASLTEYPLMKVLDKFPIPGNMPRIK 493
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 158/319 (49%), Gaps = 34/319 (10%)
Query: 36 TDAKCKQLPAIET------VLKAMSTNTSQRVSPILV----------------LILCPTR 73
T +C+ LP + + + K S T+ V P++V +I PTR
Sbjct: 252 TAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTR 311
Query: 74 ELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENK 133
ELA QI EAK K + G+ V ++ GG+ K L + C+I+VATPGRL+D ++ K
Sbjct: 312 ELAHQIFLEAKKFSKAY-GLRVSAVYGGMSKHEQFKELKAG-CEIVVATPGRLIDMLKMK 369
Query: 134 SGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQL 193
+ + +M LVLDEAD + DLGF + IV + RQ++LFSAT+P +V ++++
Sbjct: 370 A---LTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLARE 426
Query: 194 VLKREHQ-YIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFC 252
+L + + VGM + + I Q + P ++ + + +L++ + V+VF
Sbjct: 427 ILSDPIRVTVGEVGMANED----ITQVVNVIPSDA--EKLPWLLEKLPGMIDEGDVLVFA 480
Query: 253 TCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYP 312
+ + L KV +H K Q R +FK +L+++DV++RG++
Sbjct: 481 SKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIK 540
Query: 313 DVTLVLQVGIPPDREQYIH 331
+ V+ I D + ++H
Sbjct: 541 SLKTVVNYDIAKDMDMHVH 559
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 128/273 (46%), Gaps = 23/273 (8%)
Query: 64 ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATP 123
I +IL PTRELA Q + K L K+ I V GG + D RL P +LV TP
Sbjct: 193 IQAMILVPTRELALQTSQVCKELSKYLN-IQVMVTTGGTSLRDDIMRLHQ-PVHLLVGTP 250
Query: 124 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATI 183
GR+LD K G+ V L MLV+DEAD LL F+ +E+++ LP+ RQ ++FSAT
Sbjct: 251 GRILDLT--KKGVCV-LKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATF 307
Query: 184 PKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQT 243
P V+ L++ + + + + ++ V K H L T
Sbjct: 308 PVTVKAFKDRHLRKPYV-------------INLMDQLTLMGVTQYYAFVEERQKVHCLNT 354
Query: 244 PDYKV-----IVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLI 298
K+ I+FC L+ + + E+ IH++ Q +R RV EF+
Sbjct: 355 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRN 414
Query: 299 LVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
LV +D+ +RG++ V +V+ P E Y+H
Sbjct: 415 LVCTDLFTRGIDIQAVNVVINFDFPRTSESYLH 447
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 128/273 (46%), Gaps = 23/273 (8%)
Query: 64 ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATP 123
I +IL PTRELA Q + K L K+ I V GG + D RL P +LV TP
Sbjct: 193 IQAMILVPTRELALQTSQVCKELSKYLN-IQVMVTTGGTSLRDDIMRLHQ-PVHLLVGTP 250
Query: 124 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATI 183
GR+LD K G+ V L MLV+DEAD LL F+ +E+++ LP+ RQ ++FSAT
Sbjct: 251 GRILDLT--KKGVCV-LKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATF 307
Query: 184 PKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQT 243
P V+ L++ + + + + ++ V K H L T
Sbjct: 308 PVTVKAFKDRHLRKPYV-------------INLMDQLTLMGVTQYYAFVEERQKVHCLNT 354
Query: 244 PDYKV-----IVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLI 298
K+ I+FC L+ + + E+ IH++ Q +R RV EF+
Sbjct: 355 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRN 414
Query: 299 LVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
LV +D+ +RG++ V +V+ P E Y+H
Sbjct: 415 LVCTDLFTRGIDIQAVNVVINFDFPRTSESYLH 447
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 132/277 (47%), Gaps = 31/277 (11%)
Query: 67 LILCPTRELASQIAAEAKVLLKHHEGIGVQSL-----VGGVRFKLDQKRLDSDPCQILVA 121
LI+CP+RELA Q + + G L +GG+ + Q + I+VA
Sbjct: 226 LIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMR-SQLEVVKRGVHIVVA 284
Query: 122 TPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSA 181
TPGRL D + K + L + L LDEAD L+DLGF DI ++ D QRQ++LFSA
Sbjct: 285 TPGRLKDMLAKKK---MSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSA 341
Query: 182 TIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKE--- 238
T+P +++ ++ L + PV + A + Q V ++ +E
Sbjct: 342 TMPTKIQIFARSALVK---------------PVTVNVGRAGAANLDVIQEVEYVKQEAKI 386
Query: 239 ----HILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKES 294
LQ V++FC +++ L ++ IH K Q R FK
Sbjct: 387 VYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAG 446
Query: 295 KQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
K+ +LV++DV+S+G+++PD+ V+ +P + E Y+H
Sbjct: 447 KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH 483
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 127/245 (51%), Gaps = 10/245 (4%)
Query: 65 LVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPG 124
+VLIL PTRELA QI E++ G+ + GG K Q R +I++ATPG
Sbjct: 240 IVLILAPTRELAVQIQEESRKF-GLRSGVRSTCIYGGAP-KGPQIRDLRRGVEIVIATPG 297
Query: 125 RLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIP 184
RL+D +E + L + LVLDEAD +LD+GF I KIV + RQ++L+SAT P
Sbjct: 298 RLIDMLECQH---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWP 354
Query: 185 KEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTP 244
+EV +++ L+ ++ I +G ++ I Q I P + + +LK+ + +
Sbjct: 355 REVETLARQFLRDPYKAI--IGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGS- 411
Query: 245 DYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDV 304
K+++F + + LR IH K Q R RV EFK + I+ ++DV
Sbjct: 412 --KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDV 469
Query: 305 SSRGM 309
++RG+
Sbjct: 470 AARGL 474
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 31/279 (11%)
Query: 65 LVLILCPTRELASQIAAEAKVLLKHHEGIGVQSL-----VGGVRFKLDQKRLDSDPCQIL 119
+ L++CP+RELA Q + + G L +GGV + Q + I+
Sbjct: 175 IALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMR-SQLDVVKKGVHIV 233
Query: 120 VATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLF 179
VATPGRL D + K + L ++L LDEAD L+DLGF DI + D QRQ++LF
Sbjct: 234 VATPGRLKDILAKKK---MSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLF 290
Query: 180 SATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKE- 238
SAT+P +++ + L + PV + A + Q V ++ +E
Sbjct: 291 SATMPAKIQIFATSALVK---------------PVTVNVGRAGAANLDVIQEVEYVKQEA 335
Query: 239 ------HILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFK 292
LQ V++FC +++ L ++ IH K Q R FK
Sbjct: 336 KIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFK 395
Query: 293 ESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
K+ +LV++DV+S+G+++PD+ V+ +P + E Y+H
Sbjct: 396 AGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVH 434
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 12/337 (3%)
Query: 67 LILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRL 126
L++ PTREL QI ++ + K GI + GG L +I+V TPGR+
Sbjct: 268 LVMAPTRELVQQIHSDIRKFSKPL-GIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRM 325
Query: 127 LDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKE 186
+D + SG L + LV+DEAD + D+GF I +I+ + +RQ++LFSAT P++
Sbjct: 326 IDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQ 385
Query: 187 VRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDY 246
V +++ VL + + VG SV I Q + P F + +L E +
Sbjct: 386 VETLARKVLNKPVEI--QVGGRSV-VNKDITQLVEVRPESDRFLRLLELLGEW---SEKG 439
Query: 247 KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSS 306
K++VF +Y+ + + +H K Q R +FK +L+++ V++
Sbjct: 440 KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAA 499
Query: 307 RGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPWE-EYFLDEIKDLPL 365
RG++ ++ LV+ P E Y+H + I+ + +Y D +K L L
Sbjct: 500 RGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALEL 559
Query: 366 KKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLG 402
+ P+PD K + M K+ I++A G+ G
Sbjct: 560 SEQPVPD---DLKALADGFMVKVKQGIEQAHGTGYGG 593
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 138/285 (48%), Gaps = 31/285 (10%)
Query: 56 NTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDP 115
+TS R + LIL PTRELA+Q + + H I + +GG D ++L+
Sbjct: 98 DTSSR--EVQALILSPTRELATQTEKTIQAI-GLHANIQAHACIGGNSVGEDIRKLEH-G 153
Query: 116 CQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQ 175
++ TPGR+ D ++ +S +R +++L+LDE+D +L GF+ I + LP Q
Sbjct: 154 VHVVSGTPGRVCDMIKRRS---LRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQ 210
Query: 176 SMLFSATIPKEVRRIS--------QLVLKREHQYIDTVGMGSVETPVQIKQSFL-IAPHE 226
L SAT+P E+ ++ ++++KR+ ++ IKQ F+ + E
Sbjct: 211 VCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEG-----------IKQFFVAVEKEE 259
Query: 227 SHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTR 286
F + + + + ++FC + + +R V +H PQ R
Sbjct: 260 WKFDTLCDLYDTLTIT----QAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDA 315
Query: 287 VSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ +EF+ +L+++DV +RG++ V+LV+ +P +RE YIH
Sbjct: 316 IMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH 360
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 127/273 (46%), Gaps = 23/273 (8%)
Query: 64 ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATP 123
I +I+ PTRELA Q + K L KH + I V GG K D RL P +LV TP
Sbjct: 200 IQAVIIVPTRELALQTSQVCKELGKHLK-IQVMVTTGGTSLKDDIMRL-YQPVHLLVGTP 257
Query: 124 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATI 183
GR+LD K G+ V L +LV+DEAD LL F+ +E ++ LP RQ ++FSAT
Sbjct: 258 GRILDLT--KKGVCV-LKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSATF 314
Query: 184 PKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQT 243
P V+ L + Y+ + + + + V K H L T
Sbjct: 315 PVTVKDFKDRFLT--NPYV-----------INLMDELTLKGITQFYAFVEERQKIHCLNT 361
Query: 244 PDYKV-----IVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLI 298
K+ I+FC L+ + + E+ IH++ Q +R RV +F+
Sbjct: 362 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 421
Query: 299 LVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
LV +D+ +RG++ V +V+ P + E Y+H
Sbjct: 422 LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLH 454
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 127/273 (46%), Gaps = 23/273 (8%)
Query: 64 ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATP 123
I +I+ PTRELA Q + K L KH + I V GG K D RL P +LV TP
Sbjct: 200 IQAVIIVPTRELALQTSQVCKELGKHLK-IQVMVTTGGTSLKDDIMRL-YQPVHLLVGTP 257
Query: 124 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATI 183
GR+LD K G+ V L +LV+DEAD LL F+ +E ++ LP RQ ++FSAT
Sbjct: 258 GRILDLT--KKGVCV-LKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSATF 314
Query: 184 PKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQT 243
P V+ L + Y+ + + + + V K H L T
Sbjct: 315 PVTVKDFKDRFLT--NPYV-----------INLMDELTLKGITQFYAFVEERQKIHCLNT 361
Query: 244 PDYKV-----IVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLI 298
K+ I+FC L+ + + E+ IH++ Q +R RV +F+
Sbjct: 362 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 421
Query: 299 LVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
LV +D+ +RG++ V +V+ P + E Y+H
Sbjct: 422 LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLH 454
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 12/337 (3%)
Query: 67 LILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRL 126
L++ PTREL QI ++ + K GI + GG L +I+V TPGR+
Sbjct: 606 LVMAPTRELVQQIHSDIRKFSKPL-GIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRM 663
Query: 127 LDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKE 186
+D + SG L + LV+DEAD + D+GF I +I+ + +RQ++LFSAT P++
Sbjct: 664 IDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQ 723
Query: 187 VRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDY 246
V +++ VL + + VG SV I Q + P F + +L E +
Sbjct: 724 VETLARKVLNKPVEI--QVGGRSV-VNKDITQLVEVRPESDRFLRLLELLGEW---SEKG 777
Query: 247 KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSS 306
K++VF +Y+ + + +H K Q R +FK +L+++ V++
Sbjct: 778 KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAA 837
Query: 307 RGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPWE-EYFLDEIKDLPL 365
RG++ ++ LV+ P E Y+H + I+ + +Y D +K L L
Sbjct: 838 RGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALEL 897
Query: 366 KKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLG 402
+ P+PD K + M K+ I++A G+ G
Sbjct: 898 SEQPVPD---DLKALADGFMVKVKQGIEQAHGTGYGG 931
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
L+L PTRELA QI + L + G+ Q+ VGG + DQ+ L S ++V TPGR
Sbjct: 112 ALVLAPTRELAQQIEKVMRAL-GDYLGVKAQACVGGTSVREDQRVLQS-GVHVVVGTPGR 169
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPK 185
+ D + +S +R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P
Sbjct: 170 VFDLLRRQS---LRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPP 226
Query: 186 EVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPD 245
E I++ + + + + ++E IKQ ++ E L E + T
Sbjct: 227 EALEITRKFMNKPVRILVKRDELTLEG---IKQFYVNVDKEEWKLETLCDLYETLAIT-- 281
Query: 246 YKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVS 305
+ ++F + +R V H Q R + EF+ +L+++D+
Sbjct: 282 -QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 340
Query: 306 SRGMNYPDVTLVLQVGIPPDREQYIH 331
+RG++ V+LV+ +P E Y+H
Sbjct: 341 ARGIDVQQVSLVINFDLPTQPENYLH 366
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 178/396 (44%), Gaps = 71/396 (17%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
LI+ PTRELA Q+ + K+ + V +VGG+ + ++RL P +I+VATPGR
Sbjct: 282 ALIITPTRELALQVTEHLENAAKNL-SVKVVPIVGGMFSEKQERRLKEKP-EIVVATPGR 339
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLP-------------- 171
L + + V L L VLDEAD +++ G ++++ I+D LP
Sbjct: 340 LWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVK 399
Query: 172 ----------RQRQSMLFSATIP------KEVRR------------------ISQLVLKR 197
++RQ+ +FSATI K+++R +S+ R
Sbjct: 400 SNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMR 459
Query: 198 EHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMV 257
++ I + S+ P +I++SF+ + +++IL H + IVFCT V
Sbjct: 460 DNVAIIDLTTTSILAP-KIEESFIKCEEKEKDAYLYYILSVH----GQGRTIVFCTS--V 512
Query: 258 TSLMY--QVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVT 315
T L + +L+ + L V + S Q R + D F+ S+ IL+++D+ +RG++ +V
Sbjct: 513 TDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLVARGIDIKNVR 572
Query: 316 LVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPWE---------EYFLDEIKDLPLK 366
++ +P E Y+H I LI P E + ++ +K PL
Sbjct: 573 TIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNETSKFYTLCKSFSMESVKIFPLD 632
Query: 367 KIPLPDIDPQAKLKIEHSMEKID-DDIKEAAYHGWL 401
+P + + +L + + +I+ +E A WL
Sbjct: 633 NSYMPAV--RKRLYLARQIYEIERKGSRENADRTWL 666
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 27/325 (8%)
Query: 56 NTSQRVSP----ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRL 111
+T Q++ P + L+LC TRELA QI E + V GGV K+ + L
Sbjct: 103 STLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 112 DSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLD-LGFRKDIEKIVDCL 170
++ I+V TPGR+L K + L ++ +LDE D +L+ L R+D+++I
Sbjct: 163 KNECPHIVVGTPGRVLALAREKD---LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
Query: 171 PRQRQSMLFSATIPKEVRRISQLVLKREHQ-YIDTVGMGSVETPVQIKQSFLIAPHESHF 229
P +Q M+FSAT+ KE+R + + ++ + Y+D ++ VQ ++ E +
Sbjct: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKLSEMEKNR 277
Query: 230 QIVHHILKEHILQTPDY-KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVS 288
++ +L D+ +V++F + + ++L E IHS Q R
Sbjct: 278 KL------NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRY 331
Query: 289 DEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILL 348
FKE + ILV++D+ RG++ V +V+ +P + Y+H I
Sbjct: 332 KSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 391
Query: 349 IAPW---------EEYFLDEIKDLP 364
+A +E F +IK+LP
Sbjct: 392 VASASDSEVLNQVQERFEVDIKELP 416
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 27/325 (8%)
Query: 56 NTSQRVSP----ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRL 111
+T Q++ P + L+LC TRELA QI E + V GGV K+ + L
Sbjct: 103 STLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 112 DSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLD-LGFRKDIEKIVDCL 170
++ I+V TPGR+L K + L ++ +LDE D +L+ L R+D+++I
Sbjct: 163 KNECPHIVVGTPGRVLALAREKD---LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
Query: 171 PRQRQSMLFSATIPKEVRRISQLVLKREHQ-YIDTVGMGSVETPVQIKQSFLIAPHESHF 229
P +Q M+FSAT+ KE+R + + ++ + Y+D ++ VQ ++ E +
Sbjct: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKLSEMEKNR 277
Query: 230 QIVHHILKEHILQTPDY-KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVS 288
++ +L D+ +V++F + + ++L E IHS Q R
Sbjct: 278 KL------NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRY 331
Query: 289 DEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILL 348
FKE + ILV++D+ RG++ V +V+ +P + Y+H I
Sbjct: 332 KSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 391
Query: 349 IAPW---------EEYFLDEIKDLP 364
+A +E F +IK+LP
Sbjct: 392 VASASDSEVLNQVQERFEVDIKELP 416
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
L+L PTRELA QI + L + G+ V + VGG + DQ+ L + ++V TPGR
Sbjct: 110 ALVLAPTRELAQQIEKVMRAL-GDYLGVKVHACVGGTSVREDQRILQAG-VHVVVGTPGR 167
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPK 185
+ D ++ +S +R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P
Sbjct: 168 VFDMLKRQS---LRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPP 224
Query: 186 EVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPD 245
E I++ + + + + ++E IKQ ++ E L E + T
Sbjct: 225 EALEITRKFMSKPVRILVKRDELTLEG---IKQFYVNVEKEEWKLETLCDLYETLAIT-- 279
Query: 246 YKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVS 305
+ ++F + +R V H Q R + EF+ +L+++D+
Sbjct: 280 -QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
Query: 306 SRGMNYPDVTLVLQVGIPPDREQYIH 331
+RG++ V+LV+ +P E Y+H
Sbjct: 339 ARGIDVQQVSLVINFDLPTQPENYLH 364
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
L+L PTRELA QI + L + G+ V + VGG + DQ+ L + ++V TPGR
Sbjct: 110 ALVLAPTRELAQQIEKVMRAL-GDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGR 167
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPK 185
+ D ++ +S +R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P
Sbjct: 168 VFDMLKRQS---LRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPP 224
Query: 186 EVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPD 245
E I++ + + + + ++E IKQ ++ E L E + T
Sbjct: 225 EALEITRKFMSKPVRILVKRDELTLEG---IKQFYVNVEKEEWKLETLCDLYETLAIT-- 279
Query: 246 YKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVS 305
+ ++F + +R V H Q R + EF+ +L+++D+
Sbjct: 280 -QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
Query: 306 SRGMNYPDVTLVLQVGIPPDREQYIH 331
+RG++ V+LV+ +P E Y+H
Sbjct: 339 ARGIDVQQVSLVINFDLPTQPENYLH 364
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 15/277 (5%)
Query: 56 NTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDP 115
N S R + VL+L P+RELASQ + + H I + +GG D K+L+
Sbjct: 85 NISSR--KVQVLVLSPSRELASQTEKTIQAI-GAHTNIQAHACIGGKSIGEDIKKLER-G 140
Query: 116 CQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQ 175
+ TPGR+ D + K G S++ +++LVLDE+D +L G + I + LP Q
Sbjct: 141 VHAVSGTPGRVYDMI--KRG-SLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQ 197
Query: 176 SMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFL-IAPHESHFQIVHH 234
L SAT+P+E+ +++ + + + ++E IKQ ++ + E F +
Sbjct: 198 VCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEG---IKQYYVDVDKEEWKFDTLCD 254
Query: 235 ILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKES 294
+ + + I+FC + + +R V +H K Q R + ++F+
Sbjct: 255 LYGRLTIN----QAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSF 310
Query: 295 KQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
K +L++SDV +RG++ V+ V+ IP + E YIH
Sbjct: 311 KSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIH 347
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 27/325 (8%)
Query: 56 NTSQRVSP----ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRL 111
+T Q++ P + L+LC TRELA QI E + V GGV K+ + L
Sbjct: 20 STLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 79
Query: 112 DSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLD-LGFRKDIEKIVDCL 170
++ I+V TPGR+L K + L ++ +LDE D +L+ L R+D+++I
Sbjct: 80 KNECPHIVVGTPGRVLALAREKD---LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 136
Query: 171 PRQRQSMLFSATIPKEVRRISQLVLKREHQ-YIDTVGMGSVETPVQIKQSFLIAPHESHF 229
P +Q M+FSAT+ KE+R + + ++ + Y+D ++ VQ ++ E +
Sbjct: 137 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKLSEMEKNR 194
Query: 230 QIVHHILKEHILQTPDY-KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVS 288
++ +L D+ +V++F + + ++L E IHS Q R
Sbjct: 195 KL------NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRY 248
Query: 289 DEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILL 348
FKE + ILV++D+ RG++ V +V+ +P + Y+H I
Sbjct: 249 KSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 308
Query: 349 IAPW---------EEYFLDEIKDLP 364
+A +E F +IK+LP
Sbjct: 309 VASASDSEVLNQVQERFEVDIKELP 333
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 141/302 (46%), Gaps = 53/302 (17%)
Query: 60 RVSPIL----VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVG---GVRFKLDQKRLD 112
RV P L L +CPTRELA+Q +VL K + G+ + + R R
Sbjct: 155 RVDPTLREPQALCICPTRELANQ---NMEVLQKMGKFTGITAELAVPDSTRGAPAATRGA 211
Query: 113 SDPCQILVATPGRLLDHVENKSGISVRLMGL---QMLVLDEADHLLDL-GFRKDIEKIVD 168
+++ TPG L K ++ + +GL ++LV DEADH+L GFR D KI+
Sbjct: 212 PVSAHVVIGTPGTL------KKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMK 265
Query: 169 CLPR---QRQSMLFSAT--------IPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIK 217
+ R Q +LFSAT + + V+ +QL +KRE +D+V K
Sbjct: 266 DIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSV-----------K 314
Query: 218 QSFLIAPHESHFQIVHHILKEHILQTPDY-KVIVFCTCGMVTSLMYQVLREMKLKVKEIH 276
Q ++ P E Q ++K+ I++ D + I+F +++ L EM V +H
Sbjct: 315 QYKVVCPKE---QNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVH 371
Query: 277 SRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIP-------PDREQY 329
+ R ++ EFKE +L+++DV +RG + V LV+ +P PD E Y
Sbjct: 372 GNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVY 431
Query: 330 IH 331
+H
Sbjct: 432 LH 433
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
L+L PTRELA QI + L ++G+ V + VGG + DQ+ L + ++V TPGR
Sbjct: 110 ALVLAPTRELAQQIEKVMRAL-GDYQGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGR 167
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPK 185
+ D + +S +R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P
Sbjct: 168 VFDMLRRQS---LRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPP 224
Query: 186 EVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPD 245
E I++ + + + + ++E IKQ ++ E L E + T
Sbjct: 225 EALEITRKFMSKPVRILVKRDELTLEG---IKQFYVNVEKEDWKLETLCDLYETLAIT-- 279
Query: 246 YKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVS 305
+ ++F + +R V H Q R + EF+ +L+++D+
Sbjct: 280 -QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
Query: 306 SRGMNYPDVTLVLQVGIPPDREQYIH 331
+RG++ V+LV+ +P E Y+H
Sbjct: 339 ARGIDVQQVSLVINFDLPTQPENYLH 364
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
L+L PTRELA QI + L ++G+ V + VGG + DQ+ L + ++V TPGR
Sbjct: 105 ALVLAPTRELAQQIEKVMRAL-GDYQGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGR 162
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPK 185
+ D + +S +R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P
Sbjct: 163 VFDMLRRQS---LRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPP 219
Query: 186 EVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPD 245
E I++ + + + + ++E IKQ ++ E L E + T
Sbjct: 220 EALEITRKFMSKPVRILVKRDELTLEG---IKQFYVNVEKEDWKLETLCDLYETLAIT-- 274
Query: 246 YKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVS 305
+ ++F + +R V H Q R + EF+ +L+++D+
Sbjct: 275 -QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 333
Query: 306 SRGMNYPDVTLVLQVGIPPDREQYIH 331
+RG++ V+LV+ +P E Y+H
Sbjct: 334 ARGIDVQQVSLVINFDLPTQPENYLH 359
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
L+L PTRELA QI + L + G+ V + VGG + DQ+ L + ++V TPGR
Sbjct: 105 ALVLAPTRELAQQIEKVMRAL-GDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGR 162
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPK 185
+ D ++ +S +R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P
Sbjct: 163 VFDMLKRQS---LRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPP 219
Query: 186 EVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPD 245
E I++ + + + + ++E IKQ ++ E L E + T
Sbjct: 220 EALEITRKFMSKPVRILVKRDELTLEG---IKQFYVNVEKEEWKLETLCDLYETLAIT-- 274
Query: 246 YKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVS 305
+ ++F + +R V H Q R + EF+ +L+++D+
Sbjct: 275 -QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 333
Query: 306 SRGMNYPDVTLVLQVGIPPDREQYIH 331
+RG++ V+LV+ +P E Y+H
Sbjct: 334 ARGIDVQQVSLVINFDLPTQPENYLH 359
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 11/265 (4%)
Query: 67 LILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRL 126
L+L PTRELA QI + L + G+ V + VGG + DQ+ L + ++V TPGR+
Sbjct: 101 LVLAPTRELAQQIEKVMRAL-GDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRV 158
Query: 127 LDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKE 186
D ++ +S +R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P E
Sbjct: 159 FDMLKRQS---LRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPE 215
Query: 187 VRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDY 246
I++ + + + + ++E IKQ ++ E L E + T
Sbjct: 216 ALEITRKFMSKPVRILVKRDELTLEG---IKQFYVNVEKEEWKLETLCDLYETLAIT--- 269
Query: 247 KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSS 306
+ ++F + +R V H Q R + EF+ +L+++D+ +
Sbjct: 270 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 329
Query: 307 RGMNYPDVTLVLQVGIPPDREQYIH 331
RG++ V+LV+ +P E Y+H
Sbjct: 330 RGIDVQQVSLVINFDLPTQPENYLH 354
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 136/270 (50%), Gaps = 13/270 (4%)
Query: 64 ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATP 123
+ LIL PTR+LA Q K L K + + V LVGG + + L P +++ATP
Sbjct: 99 VRALILSPTRDLAEQTLKFTKELGKFTD-LRVSLLVGGDSMEDQFEELTKGP-DVIIATP 156
Query: 124 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATI 183
GRL+ + +++R ++ +V DEAD L +GF + + +I+ L RQ++LFSAT+
Sbjct: 157 GRLMHLLSEVDDMTLRT--VEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLLFSATL 214
Query: 184 PKEVRRISQLVLKREHQYIDTVGMGSVETPVQ--IKQSFLIAPHESHFQIVHHILKEHIL 241
P + ++ L RE Q + VE + +K SFL E + + ++++EHI
Sbjct: 215 PSALAEFAKAGL-REPQLVRL----DVENKISPDLKLSFLTVRPEEKYSALLYLVREHI- 268
Query: 242 QTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVS 301
+ D + ++F + + + + ++ + Q R F+ K ++L+
Sbjct: 269 -SSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIV 327
Query: 302 SDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+D+++RG++ P + V+ PP + ++H
Sbjct: 328 TDIAARGIDIPLLDNVINWDFPPRPKIFVH 357
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 152/358 (42%), Gaps = 52/358 (14%)
Query: 56 NTSQRVSP----ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRL 111
+T Q++ P + L+LC TRELA QI E + V GGV K+ + L
Sbjct: 103 STLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 112 DSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLD-LGFRKDIEKIVDCL 170
++ I+V TPGR+L K + L ++ +LDE D +L+ L R+D+++I
Sbjct: 163 KNECPHIVVGTPGRVLALAREKD---LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
Query: 171 PRQRQSMLFSATIPKEVRRISQLVLKREHQYIDT-------VGMGS-------------- 209
P +Q M+FSAT+ KE+R + + ++ + + VG GS
Sbjct: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMG 279
Query: 210 VETPVQIKQSFLIAPHESHFQ---IVHHILK----------EHILQTPDY-KVIVFCTCG 255
+ P I + E+ +V H +K +L D+ +V++F
Sbjct: 280 LNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV 339
Query: 256 MVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVT 315
+ + ++L E IHS Q R FKE + ILV++D+ RG++ V
Sbjct: 340 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVN 399
Query: 316 LVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPW---------EEYFLDEIKDLP 364
+V+ +P + Y+H I +A +E F +IK+LP
Sbjct: 400 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELP 457
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
L++ PTRELA QI E V + G S+ G + +L S C+I++ATPGR
Sbjct: 281 ALVMVPTRELAHQIEEET-VKFSRYLGFKAVSITGWESIEKQALKL-SQGCEIVIATPGR 338
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQ------------ 173
LLD +E + V L LVLDEAD ++D+ F + +++D +P
Sbjct: 339 LLDCLERRY---VVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELE 395
Query: 174 -----RQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESH 228
R + +FSAT+ V R+++ L+ + + T+G ET I Q ++
Sbjct: 396 EKKIYRTTYMFSATMLLSVERLARKFLR--NPVVVTIG----ETTKFITQQVIMTKESDK 449
Query: 229 FQIVHHILKEHILQTPDYKVIVFC-TCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRV 287
F + ++ + D IVF T V ++ + + + +V +H+ K Q R
Sbjct: 450 FSRLKKLIDD---LGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYS 506
Query: 288 SDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+EFK+ + +LV++DV RG++ D+ V+ +P + Y H
Sbjct: 507 LEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTH 550
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 150/337 (44%), Gaps = 41/337 (12%)
Query: 67 LILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRL 126
L++ PTREL QI ++ + K GI + GG L +I+V TPGR+
Sbjct: 473 LVMAPTRELVQQIYSDIRKFSKAL-GIICVPVYGGSGVAQQISELKRG-TEIVVCTPGRM 530
Query: 127 LDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKE 186
+D + SG L + LV+DEAD + D+GF I +IV + RQ++LFSAT P++
Sbjct: 531 IDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQ 590
Query: 187 VRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDY 246
V +++ VL + + VG SV I Q I P F + +L E +
Sbjct: 591 VETLARKVLNKPVEI--QVGGRSV-VNKDITQLVEIRPESERFSRLLELLGEWYEKG--- 644
Query: 247 KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSS 306
KV+VF + S++ + +FK +L+++ V++
Sbjct: 645 KVLVF-----------------------VRSQEKSI------SDFKSDVCNLLIATSVAA 675
Query: 307 RGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPWE-EYFLDEIKDLPL 365
RG++ ++ LV+ P E Y+H + I+ + +Y D +K L L
Sbjct: 676 RGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALEL 735
Query: 366 KKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLG 402
+ P+PD K E M K+ I++A G+ G
Sbjct: 736 SEQPVPD---DVKAVAEGFMAKVKQGIEQAHGTGYGG 769
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 142/319 (44%), Gaps = 48/319 (15%)
Query: 54 STNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDS 113
S + + + + I +I+ P+REL QI E + LL VQ LVGG ++ L
Sbjct: 182 SHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEALKK 241
Query: 114 DPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQ 173
+ I+V TPGR+ E G + G + LVLDE D LL FR+DI +I++ + ++
Sbjct: 242 NKPAIVVGTPGRI---AEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKR 298
Query: 174 --------------RQSMLFSATIPKEVRRISQ-------LVLKREHQYIDTV------- 205
RQ++L SAT+P V R ++ LV + +DTV
Sbjct: 299 SGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTVQPSAPVM 358
Query: 206 --------GMGSVETPVQ-----IKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFC 252
G ++T +Q +K + I+ H+ + + H L VI F
Sbjct: 359 SLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCV--HALDA--QSVIAFM 414
Query: 253 TCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYP 312
+ L + E+H +L R+ V +FK + +LV++++S+RG++
Sbjct: 415 NHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDVA 474
Query: 313 DVTLVLQVGIPPDREQYIH 331
+ LV+ + +P D Y H
Sbjct: 475 ECDLVVNLELPTDAVHYAH 493
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 130/274 (47%), Gaps = 24/274 (8%)
Query: 64 ILVLILCPTRELASQIAAEAKVLLK---HHEGIGVQSLVGGVRF-KLDQKRLDSDPCQIL 119
I +IL P RELA+Q A E K L+K H + + LV F KL C +L
Sbjct: 211 IRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKL--------WCDVL 262
Query: 120 VATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD-CLPRQRQSML 178
++TP RL ++ K + L ++ LVLDE+D L + K I+ +V C L
Sbjct: 263 ISTPMRLKRAIKAKK---IDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSL 319
Query: 179 FSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQ-IKQSFLIAPHESHFQIVHHILK 237
FSAT+P V +++ ++ H + + +G T + +KQ + A E + L+
Sbjct: 320 FSATLPDSVEELARSIM---HDAVRVI-IGRKNTASETVKQKLVFAGSEEGKLLA---LR 372
Query: 238 EHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQL 297
+ ++ + V++F +Y L+ ++ IHS P R D+F+ ++
Sbjct: 373 QSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKW 432
Query: 298 ILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+L+++DV +RGM++ + V+ P YIH
Sbjct: 433 VLIATDVIARGMDFKGINCVINYDFPDSASAYIH 466
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 139/290 (47%), Gaps = 44/290 (15%)
Query: 43 LPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAK-VLLKHHEGIGVQSLVGG 101
LP IE + + S + + ++ +I+ PTREL++QI A+ V L + V++
Sbjct: 73 LPFIEIIRR--SNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEA---- 126
Query: 102 VRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRK 161
D L+ + +L+ TPGRL D ++ + R L++L+LDEAD LLD+GF+K
Sbjct: 127 -----DMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFR--NLEILILDEADRLLDMGFQK 179
Query: 162 DIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFL 221
+ I+ LP+QR++ LFSAT + V +++ L+ + +
Sbjct: 180 QVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEA----------------- 222
Query: 222 IAPHESHFQIVHHILKEHILQTPDYKVIVF---CTCGMVTSLMYQVLREMK-LKVKEIHS 277
+ Q+VH +++ + K++VF C C L+ + +K + H
Sbjct: 223 ---DQKSSQLVH-----LLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHG 274
Query: 278 RKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDRE 327
+ Q R F E+ +L+ +DV++RG++ P + + + I DRE
Sbjct: 275 KMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAI-KDRE 323
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 154/377 (40%), Gaps = 72/377 (19%)
Query: 56 NTSQRVSP----ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRL 111
+T Q++ P + L+LC TRELA QI E + V GGV K+ + L
Sbjct: 103 STLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 112 DSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLD-LGFRKDIEKIVDCL 170
++ I+V TPGR+L K + L ++ +LDE D +L+ L R+D+++I
Sbjct: 163 KNECPHIVVGTPGRVLALAREKD---LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
Query: 171 PRQRQSMLFSATIPKEVR----RISQLVLKREHQYIDTVGMGSVETP------------- 213
P +Q M+FSAT+ KE+R + Q L+ E + G VE
Sbjct: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDFLENETVSVRLFSFG-VENSEWRLCSFGFIVLV 278
Query: 214 -VQIKQSFLIAPHESHF-------------------------QIVHHILK---------- 237
V + ++ L+ ++H +V H +K
Sbjct: 279 WVSMFRAILMFHSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKL 338
Query: 238 EHILQTPDY-KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQ 296
+L D+ +V++F + + ++L E IHS Q R FKE +
Sbjct: 339 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHK 398
Query: 297 LILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPW---- 352
ILV++D+ RG++ V +V+ +P + Y+H I +A
Sbjct: 399 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSE 458
Query: 353 -----EEYFLDEIKDLP 364
+E F +IK+LP
Sbjct: 459 VLNQVQERFEVDIKELP 475
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 130/278 (46%), Gaps = 17/278 (6%)
Query: 57 TSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQS--LVGGVRFKLDQKRLDSD 114
+ QR +P L ++L PTREL Q+ +AK+L K G+ ++ +VGG R+
Sbjct: 44 SDQRRNP-LAMVLAPTRELCVQVEDQAKMLGK---GLPFKTALVVGGDPMSGQLYRIQQG 99
Query: 115 PCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQR 174
++++ TPGR++D + + + L + VLDE D +L GFR + +I L Q
Sbjct: 100 -VELIIGTPGRVVDLLSKHT---IELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQP 154
Query: 175 QSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQ-IKQSFLIAPHESHFQIVH 233
Q +LFSATI +EV ++ + K I V +G+ P + + Q + + Q +
Sbjct: 155 QVLLFSATISREVEKVGGSLAKE----IILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLF 210
Query: 234 HILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKE 293
IL+ P V V G L + +K IH KP R V F
Sbjct: 211 DILRSQNHFKPPAVVYVSSRVG-ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLG 269
Query: 294 SKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ +LVS+ V RG++ V V+ +P ++YIH
Sbjct: 270 GEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIH 307
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 130/278 (46%), Gaps = 17/278 (6%)
Query: 57 TSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQS--LVGGVRFKLDQKRLDSD 114
+ QR +P L ++L PTREL Q+ +AK+L K G+ ++ +VGG R+
Sbjct: 181 SDQRRNP-LAMVLAPTRELCVQVEDQAKMLGK---GLPFKTALVVGGDPMSGQLYRIQQG 236
Query: 115 PCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQR 174
++++ TPGR++D + + + L + VLDE D +L GFR + +I L Q
Sbjct: 237 -VELIIGTPGRVVDLLSKHT---IELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQP 291
Query: 175 QSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQ-IKQSFLIAPHESHFQIVH 233
Q +LFSATI +EV ++ + K I V +G+ P + + Q + + Q +
Sbjct: 292 QVLLFSATISREVEKVGGSLAKE----IILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLF 347
Query: 234 HILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKE 293
IL+ P V V G L + +K IH KP R V F
Sbjct: 348 DILRSQNHFKPPAVVYVSSRVG-ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLG 406
Query: 294 SKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ +LVS+ V RG++ V V+ +P ++YIH
Sbjct: 407 GEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIH 444
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 130/278 (46%), Gaps = 17/278 (6%)
Query: 57 TSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQS--LVGGVRFKLDQKRLDSD 114
+ QR +P L ++L PTREL Q+ +AK+L K G+ ++ +VGG R+
Sbjct: 181 SDQRRNP-LAMVLAPTRELCVQVEDQAKMLGK---GLPFKTALVVGGDPMSGQLYRIQQG 236
Query: 115 PCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQR 174
++++ TPGR++D + + + L + VLDE D +L GFR + +I L Q
Sbjct: 237 -VELIIGTPGRVVDLLSKHT---IELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQP 291
Query: 175 QSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQ-IKQSFLIAPHESHFQIVH 233
Q +LFSATI +EV ++ + K I V +G+ P + + Q + + Q +
Sbjct: 292 QVLLFSATISREVEKVGGSLAKE----IILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLF 347
Query: 234 HILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKE 293
IL+ P V V G L + +K IH KP R V F
Sbjct: 348 DILRSQNHFKPPAVVYVSSRVG-ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLG 406
Query: 294 SKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+ +LVS+ V RG++ V V+ +P ++YIH
Sbjct: 407 GEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIH 444
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 26/279 (9%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 125
++LCPTREL+ Q+ AK + HH + GG R + + L+ + ++V TPGR
Sbjct: 192 TVVLCPTRELSEQVYRVAKS-ISHHARFRSILVSGGSRIRPQEDSLN-NAIDMVVGTPGR 249
Query: 126 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQR---------QS 176
+L H+E + + + LVLDEAD + D GF +I K + L QR Q+
Sbjct: 250 ILQHIEEGNMV---YGDIAYLVLDEADTMFDRGFGPEIRKFLAPL-NQRALKTNDQGFQT 305
Query: 177 MLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPV-QIKQSFL-IAPHESHFQIVHH 234
+L +AT+ V Q ++ E Q I+ + ++ + + F+ ++ E + +
Sbjct: 306 VLVTATMTMAV----QKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALLQ 361
Query: 235 ILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFK-- 292
+L+ + + KV+VFC + + L E ++ H P R +FK
Sbjct: 362 VLEPSLAK--GSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDE 419
Query: 293 ESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
E LV +D+++RG++ DV V+ P + Y+H
Sbjct: 420 EGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLH 457
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 135/294 (45%), Gaps = 47/294 (15%)
Query: 66 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLV--GGVRFKLDQKRLDSDPCQILVATP 123
V++L PT ELASQ+ A + + K G+ +S+V GG R + + L+ +L+ATP
Sbjct: 454 VIVLVPTAELASQVLANCRSISK--SGVPFRSMVVTGGFRQRTQLENLEQG-VDVLIATP 510
Query: 124 GRLLDHVENKSGISVRLMGLQMLVLDEADHLL-DLGFRKDIEKIVDCLPRQRQSMLFSAT 182
GR ++ N+ GI + L L+ +LDE D L D F ++ +++ P Q + +AT
Sbjct: 511 GRFT-YLMNE-GI-LGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTAT 567
Query: 183 IPKEVR----------------RISQLVLKREHQYIDTVGMGSVE-TPVQIKQSFLIAPH 225
+P E+ R+ ++ E +D G + E TP
Sbjct: 568 LPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTP------------ 615
Query: 226 ESHFQIVHHILKEHILQTPDYKVIVFC----TCGMVTSLMYQVLR-EMKLKVKEIHSRKP 280
E+ FQ L + + + P K I+FC TC V ++ +V R E +L V H+
Sbjct: 616 ETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALS 675
Query: 281 QLYRTRVSDEFK----ESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYI 330
Q R EF E L LV +D +SRG+++ V V+ P D +Y+
Sbjct: 676 QESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYV 729
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 139/334 (41%), Gaps = 68/334 (20%)
Query: 58 SQRVSPILVLILCPTRELASQI-----AAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLD 112
S+ V + L++ PTR+LA Q+ A V L +G S+ G + + +LD
Sbjct: 99 SRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLD 158
Query: 113 SDPC--------------QILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLG 158
+ C ILVATPGRL+DH+ N G + L L+ LV+DE D LL
Sbjct: 159 AGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFT--LEHLRYLVVDETDRLLREA 216
Query: 159 F-------------------------------------RKDIEKIVDCLPRQR-QSMLFS 180
+ R+ +E+ P R M+ S
Sbjct: 217 YQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLS 276
Query: 181 ATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHI 240
AT+ ++ ++ QL L H T G P +++ LI E+ + V+ L +
Sbjct: 277 ATLTQDPSKLIQLDL--HHPLFMTTGGSRYRLPEKLECLRLIC--ETGMKPVY--LVALL 330
Query: 241 LQTPDYKVIVFCTCGMVTSLMYQVLR---EMKLKVKEIHSRKPQLYRTRVSDEFKESKQL 297
K I+F + T + ++L + K+K KE Q R++ F++
Sbjct: 331 KSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQ 390
Query: 298 ILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
+LV+SD +RGM+ VT V+ +PP + +IH
Sbjct: 391 VLVASDALTRGMDVKGVTNVINYDMPPFAKTFIH 424
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 33/169 (19%)
Query: 43 LPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGV 102
LP ++ + A S + ++++P IL P+REL Q+ E V SL+
Sbjct: 102 LPLLQKLFSADSV-SKKKLAPS-AFILVPSRELCQQVYTE------------VSSLIELC 147
Query: 103 RFKLDQKRLDSDPC------------QILVATPGRL----LDHVENKSGISVRLMGLQML 146
R +L +L S +ILV+TP + V + +S L +L
Sbjct: 148 RVQLKAVQLTSSMSASDMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVS---ESLSIL 204
Query: 147 VLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVL 195
VLDEAD LL G+ ++ + +PR+ Q +L SAT +V ++ +L+L
Sbjct: 205 VLDEADLLLSYGYEDNLRSVTSIIPRRCQCLLMSATTSSDVEKLKKLIL 253
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 117 QILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDL--GFRKDIEKIVDCLPRQR 174
++L +P RLL+ VE S + L + ++V+DEA + + FR ++ +
Sbjct: 360 KVLFVSPERLLN-VEFLSMFRMSL-SVSLVVVDEAHCVSEWSHNFRPSYMRL-------K 410
Query: 175 QSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPV-------QIKQSFLIAPHES 227
SMLFS + + ++ Q + M S+E P Q++ +F ++ S
Sbjct: 411 ASMLFSELKAECILAMTATATTMTLQAV----MSSLEIPSTNLIQKSQLRDNFELSVSLS 466
Query: 228 HFQIVHHILKEHILQTPDYK----VIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLY 283
+ +L ++++P YK +IV+C T ++ + LR+ + K HS P
Sbjct: 467 GANRMKDLLI--LMESPPYKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKD 524
Query: 284 RTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 331
R R+ + F +K ++V++ G++ DV V+ +P E+Y+
Sbjct: 525 RVRIQESFCSNKIRVVVATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQ 572