Miyakogusa Predicted Gene

Lj0g3v0125279.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0125279.1 Non Chatacterized Hit- tr|I1L2W3|I1L2W3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,89.86,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.7551.1
         (691 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23230.2 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   891   0.0  
AT1G23230.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Mediator c...   880   0.0  

>AT1G23230.2 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: response to salt stress; EXPRESSED IN: 24
           plant structures; EXPRESSED DURING: 15 growth stages;
           CONTAINS InterPro DOMAIN/s: Mediator complex subunit
           Med23 (InterPro:IPR021629). | chr1:8244481-8251741
           FORWARD LENGTH=1592
          Length = 1592

 Score =  891 bits (2303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/668 (65%), Positives = 517/668 (77%), Gaps = 24/668 (3%)

Query: 22  HPARAPILDLFNLYLGLGRNNRHKPDDLLREPPNKTQKRVHALNRELPPPNEQFILDFEQ 81
           HPARA I+DLFNLYLG  R +R KPD+ LR+PPNK+QKRVHA NR+LPP NEQF+LDFE 
Sbjct: 21  HPARAAIIDLFNLYLG--RGSRQKPDESLRDPPNKSQKRVHAPNRDLPPRNEQFLLDFEL 78

Query: 82  LQSQFPDQDQFRSVTEAILISLVVQCSGHGPRSDFLLYVLRTLCGIGCINWDXXXXXXXX 141
           LQSQF D +Q R++TE++LISLVVQCS H PR++FLL+ LRTLC I  INWD        
Sbjct: 79  LQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFALRTLCRISYINWDTFLPSLLS 138

Query: 142 XXXXXXXPVGQMSQAVPTVXXXXXXXXGMLPPQGTVANSNFQSLNPASPLTSVHSIGSPA 201
                   + Q  QA                   +  +    S+NP S L S H IGSP+
Sbjct: 139 SVSAAEASLSQGVQAAAATAGSSAT---------SSQSVVPVSVNPTSLLPSAHGIGSPS 189

Query: 202 QPTIESLSYATLSPVKXXXXXXXXXXXKLRGSPSVRNNDISNSSLRQLCCKIILTGLEVS 261
              ++S+        +            +R S  +R   ++  SLRQL CKIIL G+E S
Sbjct: 190 ASEVKSVENGQ----QIARAGQIVRENAMRNSQRIRAAAVN--SLRQLSCKIILIGVESS 243

Query: 262 LKPVTYAEIFHHMLNWLVNWDQRQQGVDETDILKSWRPDKAVIAWLHSCLDVIWLLVDEG 321
           LKPVT+AEIF +M+NWLVNWD+R  G +++ + KSWR +K +  WL SCLDVIWLLV+EG
Sbjct: 244 LKPVTHAEIFQYMMNWLVNWDRRDLGTEDS-VGKSWRSEKTLAEWLRSCLDVIWLLVEEG 302

Query: 322 KCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHR 381
           + R+PFYELLRS LQFIENIPDDEALFTLI+EIHRRRD MAMHM MLDQHLHCP+FGTHR
Sbjct: 303 ESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHMLMLDQHLHCPSFGTHR 362

Query: 382 ILNQTTPNISGEAAAHLRLSPISYLSVLGEPLHAEDITNSIQKGSLDWERAVRCIRHALR 441
           I++Q T N+  EA  HLR SPI+Y SVLGEPL+ ED+  SI KGSLDWERAVRCIRHA+R
Sbjct: 363 IVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLAMSIPKGSLDWERAVRCIRHAIR 422

Query: 442 TTPSPDWWRRVLVLAPCYRPSSQA-PTAGAVFSSEMICEATIDRIVELLKLTNSEINCWQ 500
           TTPSPDWW+RVLV+APCYRPS+QA P  GAVF+S+MICEA IDRIVELLKLTNS+ NCWQ
Sbjct: 423 TTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMICEAIIDRIVELLKLTNSDANCWQ 482

Query: 501 DWLVFSDIFYFLVKSGCIDFVDFVDKLVSRLTEGDQHILKTNHVTWLLAQIIRIELVMNA 560
           +WLVFSDIF+FL+KSGC DFVDF+DKLV RL   D HIL+TNHVTWLLAQIIR+ELVM A
Sbjct: 483 EWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRTNHVTWLLAQIIRVELVMTA 542

Query: 561 LNLDSRKVETTRKILSFHREDRSSDPNNPQSILLEFVSSCQNLRIWSLNTTAREYLNSEQ 620
           LN D++KVETTRKILSFHREDR+SDPNNPQS+LL+FVSSCQNLRIWSL+TT R YLN+EQ
Sbjct: 543 LNSDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQ 602

Query: 621 LQKGKQIDEWWRQASKGDRMMDYMNMDERSIGMFWVVTYTMAQPACETVMNWLTSAGVID 680
           L KGKQIDEWWR  SKG+RMMDYMNMD+RSIGMFWVV+YTMAQPACETV+NWL+SAG+ +
Sbjct: 603 LLKGKQIDEWWR--SKGERMMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAE 660

Query: 681 LLPGPNLQ 688
           L   P LQ
Sbjct: 661 L---PGLQ 665


>AT1G23230.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Mediator
           complex subunit Med23 (InterPro:IPR021629); Has 187
           Blast hits to 184 proteins in 67 species: Archae - 0;
           Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43;
           Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
           | chr1:8244481-8251741 FORWARD LENGTH=1615
          Length = 1615

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/687 (64%), Positives = 517/687 (75%), Gaps = 43/687 (6%)

Query: 22  HPARAPILDLFNLYLGLGRNNRHKPDDLLREPPNKTQKRVHALNRELPPPNEQFILDFEQ 81
           HPARA I+DLFNLYLG  R +R KPD+ LR+PPNK+QKRVHA NR+LPP NEQF+LDFE 
Sbjct: 21  HPARAAIIDLFNLYLG--RGSRQKPDESLRDPPNKSQKRVHAPNRDLPPRNEQFLLDFEL 78

Query: 82  LQSQFPDQDQFRSVTEAILISLVVQCSGHGPRSDFLLYVLRTLCGIGCINWDXXXXXXXX 141
           LQSQF D +Q R++TE++LISLVVQCS H PR++FLL+ LRTLC I  INWD        
Sbjct: 79  LQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFALRTLCRISYINWDTFLPSLLS 138

Query: 142 XXXXXXXPVGQMSQAVPTVXXXXXXXXGMLPPQGTVANSNFQSLNPASPLTSVHSIGSPA 201
                   + Q  QA                   +  +    S+NP S L S H IGSP+
Sbjct: 139 SVSAAEASLSQGVQAAAATAGSSAT---------SSQSVVPVSVNPTSLLPSAHGIGSPS 189

Query: 202 QPTIESLSYATLSPVKXXXXXXXXXXXKLRGSPSVRNNDISNSSLRQLCCKIILTGLEVS 261
              ++S+        +            +R S  +R   ++  SLRQL CKIIL G+E S
Sbjct: 190 ASEVKSVENGQ----QIARAGQIVRENAMRNSQRIRAAAVN--SLRQLSCKIILIGVESS 243

Query: 262 LKPVTYAEIFHHMLNWLVNWDQRQQGVDETDILKSWRPDKAVIAWLHSCLDVIWLLVDEG 321
           LKPVT+AEIF +M+NWLVNWD+R  G +++ + KSWR +K +  WL SCLDVIWLLV+EG
Sbjct: 244 LKPVTHAEIFQYMMNWLVNWDRRDLGTEDS-VGKSWRSEKTLAEWLRSCLDVIWLLVEEG 302

Query: 322 KCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHR 381
           + R+PFYELLRS LQFIENIPDDEALFTLI+EIHRRRD MAMHM MLDQHLHCP+FGTHR
Sbjct: 303 ESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHMLMLDQHLHCPSFGTHR 362

Query: 382 ILNQTTPNISGEAAAHLRLSPISYLSVLGEPLHAEDITNSIQKGSLDWERAVRCIRHALR 441
           I++Q T N+  EA  HLR SPI+Y SVLGEPL+ ED+  SI KGSLDWERAVRCIRHA+R
Sbjct: 363 IVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLAMSIPKGSLDWERAVRCIRHAIR 422

Query: 442 TTPSPDWWRRVLVLAPCYRPSSQA-PTAGAVFSSEMICEATIDRIVELLKLTNS------ 494
           TTPSPDWW+RVLV+APCYRPS+QA P  GAVF+S+MICEA IDRIVELLKLTNS      
Sbjct: 423 TTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMICEAIIDRIVELLKLTNSGNDCFG 482

Query: 495 -------------EINCWQDWLVFSDIFYFLVKSGCIDFVDFVDKLVSRLTEGDQHILKT 541
                        + NCWQ+WLVFSDIF+FL+KSGC DFVDF+DKLV RL   D HIL+T
Sbjct: 483 IDLVSVTFPPLYADANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRT 542

Query: 542 NHVTWLLAQIIRIELVMNALNLDSRKVETTRKILSFHREDRSSDPNNPQSILLEFVSSCQ 601
           NHVTWLLAQIIR+ELVM ALN D++KVETTRKILSFHREDR+SDPNNPQS+LL+FVSSCQ
Sbjct: 543 NHVTWLLAQIIRVELVMTALNSDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQ 602

Query: 602 NLRIWSLNTTAREYLNSEQLQKGKQIDEWWRQASKGDRMMDYMNMDERSIGMFWVVTYTM 661
           NLRIWSL+TT R YLN+EQL KGKQIDEWWR  SKG+RMMDYMNMD+RSIGMFWVV+YTM
Sbjct: 603 NLRIWSLSTTTRAYLNNEQLLKGKQIDEWWR--SKGERMMDYMNMDDRSIGMFWVVSYTM 660

Query: 662 AQPACETVMNWLTSAGVIDLLPGPNLQ 688
           AQPACETV+NWL+SAG+ +L   P LQ
Sbjct: 661 AQPACETVINWLSSAGMAEL---PGLQ 684