Miyakogusa Predicted Gene

Lj0g3v0124769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0124769.1 Non Chatacterized Hit- tr|K4B9W3|K4B9W3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,33.33,1e-18,seg,NULL; Stig1,Stigma-specific protein
Stig1,CUFF.7486.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50720.1 | Symbols:  | Stigma-specific Stig1 family protein |...    91   3e-19
AT5G55110.1 | Symbols:  | Stigma-specific Stig1 family protein |...    86   9e-18
AT4G26880.1 | Symbols:  | Stigma-specific Stig1 family protein |...    79   2e-15
AT1G11925.1 | Symbols:  | Stigma-specific Stig1 family protein |...    56   1e-08
AT1G50650.1 | Symbols:  | Stigma-specific Stig1 family protein |...    52   2e-07
AT1G53130.1 | Symbols: GRI | Stigma-specific Stig1 family protei...    48   4e-06

>AT1G50720.1 | Symbols:  | Stigma-specific Stig1 family protein |
           chr1:18789180-18789644 REVERSE LENGTH=154
          Length = 154

 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 18/169 (10%)

Query: 1   MGFLKVIFIIATTMALSIAALVTMKSITTEGEAKPFVPSQKQVPFAH---EKNILLPSKR 57
           MG    +  I  T++++I  L+          A  FV + K         +   L+ + R
Sbjct: 1   MGHRNTVLTILLTISIAIMVLI----------ATVFVSNNKTETLLQTHTQTQTLITTGR 50

Query: 58  VNRFLAQKXXXXXXXXXXXXXXVVHCQKDNEICAXXXXXXXXXXXXXXKCMDVSYDKHNC 117
           V+RFLAQ                 HC K+ EIC               KC+D++YD  NC
Sbjct: 51  VSRFLAQNAKNGRNLNAAD-----HCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNC 105

Query: 118 GAXXXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGYA 166
           GA            RG+CV + +DKRHCG CN+ C  G++C YG+C YA
Sbjct: 106 GACKNQCKFTQTCCRGECVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154


>AT5G55110.1 | Symbols:  | Stigma-specific Stig1 family protein |
           chr5:22367870-22368361 FORWARD LENGTH=163
          Length = 163

 Score = 86.3 bits (212), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 3/113 (2%)

Query: 57  RVNRFLAQKXXXXXXXXXXXXXXVVHCQKDNEICAXXXXXXXXXXXXX---XKCMDVSYD 113
           R +RFLA+K                HC KDNEIC+                 KCMD+S D
Sbjct: 51  RPSRFLAEKVDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTD 110

Query: 114 KHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGYA 166
             NCG             RGQCV + +DKRHCG CN+RC+ G++C YG+C YA
Sbjct: 111 DKNCGLCKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163


>AT4G26880.1 | Symbols:  | Stigma-specific Stig1 family protein |
           chr4:13508265-13508723 REVERSE LENGTH=152
          Length = 152

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 56/115 (48%), Gaps = 7/115 (6%)

Query: 54  PSKRVNRFLAQKXXXXXXXXXXXXXXVVHCQKDNEICAXXXXXXXXXXXX--XXKCMDVS 111
           P+ R NR LAQK                HC ++ EIC                 KC+DVS
Sbjct: 43  PTIRPNRLLAQKEVGERNPNAAD-----HCNRNPEICTPYGGGGSNSTMTCCNNKCIDVS 97

Query: 112 YDKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGYA 166
            D +NCGA            RGQCV + +DKRHCG CN+ CE G++C YG+C YA
Sbjct: 98  SDDNNCGACKNKCKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152


>AT1G11925.1 | Symbols:  | Stigma-specific Stig1 family protein |
           chr1:4026195-4026617 REVERSE LENGTH=140
          Length = 140

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 34/61 (55%)

Query: 106 KCMDVSYDKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGY 165
           KC+D+  +K NCG              G CV+  FD+RHCG C  +C+ G+ C YGMC Y
Sbjct: 80  KCVDLRTNKLNCGRCGKSCQYSEVCCNGYCVNPMFDRRHCGGCFKKCKKGRSCAYGMCSY 139

Query: 166 A 166
           A
Sbjct: 140 A 140


>AT1G50650.1 | Symbols:  | Stigma-specific Stig1 family protein |
           chr1:18763773-18764297 REVERSE LENGTH=174
          Length = 174

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 32/61 (52%)

Query: 106 KCMDVSYDKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGY 165
           +C+DV  D ++C               G CVD N D  +CG C N CE+G  C +GMCGY
Sbjct: 78  QCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCEFGMCGY 137

Query: 166 A 166
           A
Sbjct: 138 A 138


>AT1G53130.1 | Symbols: GRI | Stigma-specific Stig1 family protein |
           chr1:19794947-19795453 REVERSE LENGTH=168
          Length = 168

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 30/60 (50%)

Query: 107 CMDVSYDKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGYA 166
           C +V  D++NCG              G C  +NF+  HCG C  +C +G  C YG CGYA
Sbjct: 109 CRNVLGDRNNCGRCGHKCGFGQRCCGGVCTYVNFNPNHCGKCTRKCASGVKCEYGYCGYA 168