Miyakogusa Predicted Gene

Lj0g3v0124219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0124219.1 Non Chatacterized Hit- tr|I1KTL7|I1KTL7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,58.18,0,Ribonuclease
H-like,Ribonuclease H-like domain; DUF659,Domain of unknown function
DUF659; seg,NULL; ,CUFF.7467.1
         (263 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43260.1 | Symbols:  | hAT transposon superfamily protein | c...   103   1e-22
AT1G79740.1 | Symbols:  | hAT transposon superfamily | chr1:3000...   101   5e-22
AT3G17450.1 | Symbols:  | hAT dimerisation domain-containing pro...    87   2e-17
AT4G15020.2 | Symbols:  | hAT transposon superfamily | chr4:8575...    84   1e-16
AT4G15020.1 | Symbols:  | hAT transposon superfamily | chr4:8575...    84   1e-16
AT3G13020.1 | Symbols:  | hAT transposon superfamily protein | c...    81   8e-16
AT5G31412.1 | Symbols:  | hAT transposon superfamily protein | c...    75   5e-14
AT3G13030.3 | Symbols:  | hAT transposon superfamily protein | c...    74   9e-14
AT3G13030.2 | Symbols:  | hAT transposon superfamily protein | c...    74   9e-14
AT3G13030.1 | Symbols:  | hAT transposon superfamily protein | c...    74   9e-14
AT3G13010.1 | Symbols:  | hAT transposon superfamily protein | c...    73   2e-13
AT3G22220.2 | Symbols:  | hAT transposon superfamily | chr3:7839...    67   1e-11
AT3G22220.1 | Symbols:  | hAT transposon superfamily | chr3:7839...    67   1e-11

>AT1G43260.1 | Symbols:  | hAT transposon superfamily protein |
           chr1:16318253-16319234 FORWARD LENGTH=294
          Length = 294

 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 87/148 (58%), Gaps = 1/148 (0%)

Query: 116 QYIARFFVRNSISFNVVRLKSFMLMFEAIGNYDPHLKAPSYHEMRIPLLKKELEYTQNLI 175
           QY+AR+   + I FN +       M E  G + P +  PS +++R PLLK+E+   + L+
Sbjct: 37  QYVARWVYSHGIPFNAIANDDLRRMLEVAGQFGPGVTPPSQYQLREPLLKEEVVRMKGLM 96

Query: 176 IKNVEERAKYGCSIMSDAWTDRKQRTLINFLVNSPGGSMFVRSVDGSSYMKTGEKLFILL 235
            +  +E    GCS+ +D+W+DRK+R+++N  +N   G+MF+ S D      TGE +F  +
Sbjct: 97  EEQEDEWRVNGCSVTTDSWSDRKRRSIMNLCINCKEGTMFLSSKDCFDDSHTGEYIFAYV 156

Query: 236 DN-LVEEIGEKNVVQVVTDNGSNYVLAG 262
           +   ++ +G  +VVQVVT+N +N + A 
Sbjct: 157 NEYCIKNLGGDHVVQVVTNNATNNITAA 184


>AT1G79740.1 | Symbols:  | hAT transposon superfamily |
           chr1:30004367-30006715 REVERSE LENGTH=651
          Length = 651

 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 83/143 (58%), Gaps = 5/143 (3%)

Query: 118 IARFFVRNSISFNVVRLKSFMLMFEAIGNYDPHLKAPSYHEMRIPLLKKELEYTQNLIIK 177
           I+ FF  N I F V R  S+  M +A+    P   APS     +  +K ++    +L +K
Sbjct: 112 ISLFFFENKIDFAVARSPSYHHMLDAVAKCGPGFVAPSPKTEWLDRVKSDI----SLQLK 167

Query: 178 NVE-ERAKYGCSIMSDAWTDRKQRTLINFLVNSPGGSMFVRSVDGSSYMKTGEKLFILLD 236
           + E E    GC+I+++AWTD K R LINF V+SP    F +SVD SSY K  + L  L D
Sbjct: 168 DTEKEWVTTGCTIIAEAWTDNKSRALINFSVSSPSRIFFHKSVDASSYFKNSKCLADLFD 227

Query: 237 NLVEEIGEKNVVQVVTDNGSNYV 259
           +++++IG++++VQ++ DN   Y 
Sbjct: 228 SVIQDIGQEHIVQIIMDNSFCYT 250


>AT3G17450.1 | Symbols:  | hAT dimerisation domain-containing
           protein | chr3:5972793-5975684 REVERSE LENGTH=877
          Length = 877

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 2/169 (1%)

Query: 96  AKKQTSMNDACDKE--ARARTIQYIARFFVRNSISFNVVRLKSFMLMFEAIGNYDPHLKA 153
           + KQ  +  +C     +R      I++F     +         F  M E IG Y      
Sbjct: 282 SSKQRKLYSSCSNRVVSRKDVTSSISKFLHHVGVPTEAANSLYFQKMIELIGMYGEGFVV 341

Query: 154 PSYHEMRIPLLKKELEYTQNLIIKNVEERAKYGCSIMSDAWTDRKQRTLINFLVNSPGGS 213
           PS       LL++E+   ++ + +        GCSIM+D WT+ + + +I+FLV+ P G 
Sbjct: 342 PSSQLFSGRLLQEEMSTIKSYLREYRSSWVVTGCSIMADTWTNTEGKKMISFLVSCPRGV 401

Query: 214 MFVRSVDGSSYMKTGEKLFILLDNLVEEIGEKNVVQVVTDNGSNYVLAG 262
            F  S+D +  ++    LF  LD LV++IGE+NVVQV+T N + +  AG
Sbjct: 402 YFHSSIDATDIVEDALSLFKCLDKLVDDIGEENVVQVITQNTAIFRSAG 450


>AT4G15020.2 | Symbols:  | hAT transposon superfamily |
           chr4:8575806-8578372 FORWARD LENGTH=768
          Length = 768

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 79/153 (51%), Gaps = 1/153 (0%)

Query: 111 RARTIQY-IARFFVRNSISFNVVRLKSFMLMFEAIGNYDPHLKAPSYHEMRIPLLKKELE 169
           R  TI   I RF       F+ V   +F  M +AI +    + AP++ ++R  +LK  +E
Sbjct: 190 RENTIHMAIGRFLFGIGADFDAVNSVNFQPMIDAIASGGFGVSAPTHDDLRGWILKNCVE 249

Query: 170 YTQNLIIKNVEERAKYGCSIMSDAWTDRKQRTLINFLVNSPGGSMFVRSVDGSSYMKTGE 229
                I +      + GCSI+ +     K   ++NFLV  P   +F++SVD S  + + +
Sbjct: 250 EMAKEIDECKAMWKRTGCSILVEELNSDKGFKVLNFLVYCPEKVVFLKSVDASEVLSSAD 309

Query: 230 KLFILLDNLVEEIGEKNVVQVVTDNGSNYVLAG 262
           KLF LL  LVEE+G  NVVQV+T     YV AG
Sbjct: 310 KLFELLSELVEEVGSTNVVQVITKCDDYYVDAG 342


>AT4G15020.1 | Symbols:  | hAT transposon superfamily |
           chr4:8575806-8578372 FORWARD LENGTH=768
          Length = 768

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 79/153 (51%), Gaps = 1/153 (0%)

Query: 111 RARTIQY-IARFFVRNSISFNVVRLKSFMLMFEAIGNYDPHLKAPSYHEMRIPLLKKELE 169
           R  TI   I RF       F+ V   +F  M +AI +    + AP++ ++R  +LK  +E
Sbjct: 190 RENTIHMAIGRFLFGIGADFDAVNSVNFQPMIDAIASGGFGVSAPTHDDLRGWILKNCVE 249

Query: 170 YTQNLIIKNVEERAKYGCSIMSDAWTDRKQRTLINFLVNSPGGSMFVRSVDGSSYMKTGE 229
                I +      + GCSI+ +     K   ++NFLV  P   +F++SVD S  + + +
Sbjct: 250 EMAKEIDECKAMWKRTGCSILVEELNSDKGFKVLNFLVYCPEKVVFLKSVDASEVLSSAD 309

Query: 230 KLFILLDNLVEEIGEKNVVQVVTDNGSNYVLAG 262
           KLF LL  LVEE+G  NVVQV+T     YV AG
Sbjct: 310 KLFELLSELVEEVGSTNVVQVITKCDDYYVDAG 342


>AT3G13020.1 | Symbols:  | hAT transposon superfamily protein |
           chr3:4166995-4168917 REVERSE LENGTH=605
          Length = 605

 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 5/143 (3%)

Query: 118 IARFFVRNSISFNVVRLKSFMLMFEAIGNYDPHLKAPSYHEMRIPLLKKELEYTQNLIIK 177
           I RFF  + +  + V    F  M  A+G      K P  H++   LL++ ++  Q+ + K
Sbjct: 128 IGRFFYEHCVDLSAVDSPCFKEMMMALGVGQ---KIPDSHDLNGRLLQEAMKEVQDYV-K 183

Query: 178 NVEERAKY-GCSIMSDAWTDRKQRTLINFLVNSPGGSMFVRSVDGSSYMKTGEKLFILLD 236
           N+++  K  GCSI+ DAW D K   L++F+ + P G ++++S+D S        L  L++
Sbjct: 184 NIKDSWKITGCSILLDAWIDPKGHDLVSFVADCPAGPVYLKSIDVSVVKNDVTALLSLVN 243

Query: 237 NLVEEIGEKNVVQVVTDNGSNYV 259
            LVEE+G  NV Q++  + S +V
Sbjct: 244 GLVEEVGVHNVTQIIACSTSGWV 266


>AT5G31412.1 | Symbols:  | hAT transposon superfamily protein |
           chr5:11541463-11543768 REVERSE LENGTH=433
          Length = 433

 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 49/74 (66%)

Query: 189 IMSDAWTDRKQRTLINFLVNSPGGSMFVRSVDGSSYMKTGEKLFILLDNLVEEIGEKNVV 248
           +M+DAW+D K+R+++N  VNS GG  F+ S D S+   TG  +F  +D  + ++G KNVV
Sbjct: 136 VMTDAWSDMKRRSIMNLCVNSKGGKCFLSSKDASTNSHTGLYIFEYVDRCIADVGAKNVV 195

Query: 249 QVVTDNGSNYVLAG 262
           QVVTDN  N V A 
Sbjct: 196 QVVTDNALNNVTAA 209


>AT3G13030.3 | Symbols:  | hAT transposon superfamily protein |
           chr3:4169675-4171417 REVERSE LENGTH=544
          Length = 544

 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 62/109 (56%)

Query: 151 LKAPSYHEMRIPLLKKELEYTQNLIIKNVEERAKYGCSIMSDAWTDRKQRTLINFLVNSP 210
           L++   H++    L+  LE  Q+ + K  E  A  GCSI+ DAW D+K R L+ F+ + P
Sbjct: 85  LESSDCHDLNGWRLQDALEEVQDRVEKIKESWAITGCSILLDAWVDQKGRDLVTFVADCP 144

Query: 211 GGSMFVRSVDGSSYMKTGEKLFILLDNLVEEIGEKNVVQVVTDNGSNYV 259
            G +++ S D S +      L  L++ LVEE+G +NV Q++  + S +V
Sbjct: 145 AGLVYLISFDVSDFKDDVTALLSLVNGLVEEVGVRNVTQIIACSTSGWV 193


>AT3G13030.2 | Symbols:  | hAT transposon superfamily protein |
           chr3:4169675-4171417 REVERSE LENGTH=544
          Length = 544

 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 62/109 (56%)

Query: 151 LKAPSYHEMRIPLLKKELEYTQNLIIKNVEERAKYGCSIMSDAWTDRKQRTLINFLVNSP 210
           L++   H++    L+  LE  Q+ + K  E  A  GCSI+ DAW D+K R L+ F+ + P
Sbjct: 85  LESSDCHDLNGWRLQDALEEVQDRVEKIKESWAITGCSILLDAWVDQKGRDLVTFVADCP 144

Query: 211 GGSMFVRSVDGSSYMKTGEKLFILLDNLVEEIGEKNVVQVVTDNGSNYV 259
            G +++ S D S +      L  L++ LVEE+G +NV Q++  + S +V
Sbjct: 145 AGLVYLISFDVSDFKDDVTALLSLVNGLVEEVGVRNVTQIIACSTSGWV 193


>AT3G13030.1 | Symbols:  | hAT transposon superfamily protein |
           chr3:4169675-4171417 REVERSE LENGTH=544
          Length = 544

 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 62/109 (56%)

Query: 151 LKAPSYHEMRIPLLKKELEYTQNLIIKNVEERAKYGCSIMSDAWTDRKQRTLINFLVNSP 210
           L++   H++    L+  LE  Q+ + K  E  A  GCSI+ DAW D+K R L+ F+ + P
Sbjct: 85  LESSDCHDLNGWRLQDALEEVQDRVEKIKESWAITGCSILLDAWVDQKGRDLVTFVADCP 144

Query: 211 GGSMFVRSVDGSSYMKTGEKLFILLDNLVEEIGEKNVVQVVTDNGSNYV 259
            G +++ S D S +      L  L++ LVEE+G +NV Q++  + S +V
Sbjct: 145 AGLVYLISFDVSDFKDDVTALLSLVNGLVEEVGVRNVTQIIACSTSGWV 193


>AT3G13010.1 | Symbols:  | hAT transposon superfamily protein |
           chr3:4162931-4164733 REVERSE LENGTH=572
          Length = 572

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 2/144 (1%)

Query: 118 IARFFVRNSISFNVVRLKSF--MLMFEAIGNYDPHLKAPSYHEMRIPLLKKELEYTQNLI 175
           +A+FF  + + F+ V   SF  M+M + +G        P   ++   + ++ L+  Q+ +
Sbjct: 99  VAQFFYEHGVDFSAVDSTSFKKMMMIKTVGGEGGGQMIPDSRDLNGWMFQEALKKVQDRV 158

Query: 176 IKNVEERAKYGCSIMSDAWTDRKQRTLINFLVNSPGGSMFVRSVDGSSYMKTGEKLFILL 235
            +        GCSI+ DAW   K R L+ F+ + P G+++++S D S        L  L+
Sbjct: 159 KEIKASWEITGCSILFDAWIGPKGRDLVTFVADCPAGAVYLKSADVSDIKTDVTALTSLV 218

Query: 236 DNLVEEIGEKNVVQVVTDNGSNYV 259
           + +VEE+G +NV Q++  + S +V
Sbjct: 219 NGIVEEVGVRNVTQIIACSTSGWV 242


>AT3G22220.2 | Symbols:  | hAT transposon superfamily |
           chr3:7839808-7842358 REVERSE LENGTH=761
          Length = 761

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 1/153 (0%)

Query: 111 RARTIQY-IARFFVRNSISFNVVRLKSFMLMFEAIGNYDPHLKAPSYHEMRIPLLKKELE 169
           R +T+   + RF       F+     +     +AI +    +  P++ ++R  +LK  +E
Sbjct: 186 REKTVHMAMGRFLFDIGADFDAANSVNVQPFIDAIVSGGFGVSIPTHEDLRGWILKSCVE 245

Query: 170 YTQNLIIKNVEERAKYGCSIMSDAWTDRKQRTLINFLVNSPGGSMFVRSVDGSSYMKTGE 229
             +  I +      + GCS++       +   ++ FLV  P   +F++SVD S  + + +
Sbjct: 246 EVKKEIDECKTLWKRTGCSVLVQELNSNEGPLILKFLVYCPEKVVFLKSVDASEILDSED 305

Query: 230 KLFILLDNLVEEIGEKNVVQVVTDNGSNYVLAG 262
           KL+ LL  +VEEIG+ NVVQV+T    +Y  AG
Sbjct: 306 KLYELLKEVVEEIGDTNVVQVITKCEDHYAAAG 338


>AT3G22220.1 | Symbols:  | hAT transposon superfamily |
           chr3:7839808-7842358 REVERSE LENGTH=761
          Length = 761

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 1/153 (0%)

Query: 111 RARTIQY-IARFFVRNSISFNVVRLKSFMLMFEAIGNYDPHLKAPSYHEMRIPLLKKELE 169
           R +T+   + RF       F+     +     +AI +    +  P++ ++R  +LK  +E
Sbjct: 186 REKTVHMAMGRFLFDIGADFDAANSVNVQPFIDAIVSGGFGVSIPTHEDLRGWILKSCVE 245

Query: 170 YTQNLIIKNVEERAKYGCSIMSDAWTDRKQRTLINFLVNSPGGSMFVRSVDGSSYMKTGE 229
             +  I +      + GCS++       +   ++ FLV  P   +F++SVD S  + + +
Sbjct: 246 EVKKEIDECKTLWKRTGCSVLVQELNSNEGPLILKFLVYCPEKVVFLKSVDASEILDSED 305

Query: 230 KLFILLDNLVEEIGEKNVVQVVTDNGSNYVLAG 262
           KL+ LL  +VEEIG+ NVVQV+T    +Y  AG
Sbjct: 306 KLYELLKEVVEEIGDTNVVQVITKCEDHYAAAG 338