Miyakogusa Predicted Gene

Lj0g3v0124089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0124089.1 Non Chatacterized Hit- tr|I1JWI6|I1JWI6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,92.11,0.00000000007,Romo1,Reactive oxygen species modulator
1,CUFF.7455.1
         (38 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07910.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    51   2e-07

>AT3G07910.1 | Symbols:  | FUNCTIONS IN: molecular_function
          unknown; INVOLVED IN: biological_process unknown;
          LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant
          structures; EXPRESSED DURING: 15 growth stages;
          CONTAINS InterPro DOMAIN/s: Reactive oxygen species
          modulator 1 (InterPro:IPR018450); Has 192 Blast hits to
          192 proteins in 80 species: Archae - 0; Bacteria - 0;
          Metazoa - 139; Fungi - 6; Plants - 39; Viruses - 0;
          Other Eukaryotes - 8 (source: NCBI BLink). |
          chr3:2523367-2524048 REVERSE LENGTH=74
          Length = 74

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 1  MRLKVPGFLKIRHIGQTTLGSAAVFSLFLAAGTLI 35
          +R+KVPG  K+R IGQTTL SAA+F LFL AG+LI
Sbjct: 34 IRVKVPGLHKVRFIGQTTLSSAAIFGLFLGAGSLI 68