Miyakogusa Predicted Gene

Lj0g3v0123039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0123039.1 Non Chatacterized Hit- tr|I1J1J5|I1J1J5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,73.08,0.0000000000001,seg,NULL;
Exostosin,Exostosin-like,CUFF.7368.1
         (159 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21480.2 | Symbols:  | Exostosin family protein | chr1:751937...   155   1e-38
AT1G21480.1 | Symbols:  | Exostosin family protein | chr1:751911...   154   3e-38

>AT1G21480.2 | Symbols:  | Exostosin family protein |
           chr1:7519372-7521426 REVERSE LENGTH=410
          Length = 410

 Score =  155 bits (392), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/175 (49%), Positives = 97/175 (55%), Gaps = 18/175 (10%)

Query: 3   SASNSNKQRTMPSXXXXXXXCTRSHQIGXXXXXXXXXXXXXXXDSPCXXXXXXXXXXXXP 62
           ++  SNK R   +       CTR+HQIG               D                
Sbjct: 2   ASLTSNKPRNFGAYSHYATPCTRTHQIGALFLVVSTFFVTRLFDQWFSESNSVTPVIDLR 61

Query: 63  RN--------------LPE----DPPSLKIYVYDPNEIDGLNELMRGRDGKITEEACLKG 104
           R                PE       SLKIYVYD NEIDGL EL+ GRDG +   ACLKG
Sbjct: 62  RTSSSYGIKTDNGIIRWPERGYGSHLSLKIYVYDENEIDGLKELLYGRDGSVKTTACLKG 121

Query: 105 QWGSQVKIHKLLLQSRCRTRKKEEADLFFVPSYVKCARMMGGLNDKEINHTYVKV 159
           QWGSQVKIHKLLL+S+ RT KK+EADLFFVP+YVKC RM+GGLNDKEIN TYVKV
Sbjct: 122 QWGSQVKIHKLLLESKFRTIKKDEADLFFVPAYVKCVRMLGGLNDKEINQTYVKV 176


>AT1G21480.1 | Symbols:  | Exostosin family protein |
           chr1:7519116-7521426 REVERSE LENGTH=462
          Length = 462

 Score =  154 bits (389), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 86/175 (49%), Positives = 97/175 (55%), Gaps = 18/175 (10%)

Query: 3   SASNSNKQRTMPSXXXXXXXCTRSHQIGXXXXXXXXXXXXXXXDSPCXXXXXXXXXXXXP 62
           ++  SNK R   +       CTR+HQIG               D                
Sbjct: 2   ASLTSNKPRNFGAYSHYATPCTRTHQIGALFLVVSTFFVTRLFDQWFSESNSVTPVIDLR 61

Query: 63  RN--------------LPE----DPPSLKIYVYDPNEIDGLNELMRGRDGKITEEACLKG 104
           R                PE       SLKIYVYD NEIDGL EL+ GRDG +   ACLKG
Sbjct: 62  RTSSSYGIKTDNGIIRWPERGYGSHLSLKIYVYDENEIDGLKELLYGRDGSVKTTACLKG 121

Query: 105 QWGSQVKIHKLLLQSRCRTRKKEEADLFFVPSYVKCARMMGGLNDKEINHTYVKV 159
           QWGSQVKIHKLLL+S+ RT KK+EADLFFVP+YVKC RM+GGLNDKEIN TYVKV
Sbjct: 122 QWGSQVKIHKLLLESKFRTIKKDEADLFFVPAYVKCVRMLGGLNDKEINQTYVKV 176