Miyakogusa Predicted Gene
- Lj0g3v0122989.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0122989.1 tr|I1MT00|I1MT00_SOYBN DNA-directed RNA
polymerase OS=Glycine max GN=Gma.48961 PE=3
SV=1,79.72,0,RNA_POL_PHAGE_2,DNA-directed RNA polymerase, phage-type;
RNA_POL_PHAGE_1,DNA-directed RNA polymerase,CUFF.7423.1
(732 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G24120.1 | Symbols: PDE319, SCA3 | DNA/RNA polymerases superf... 1009 0.0
AT2G24120.2 | Symbols: PDE319, SCA3 | DNA/RNA polymerases superf... 1007 0.0
AT1G68990.1 | Symbols: MGP3 | male gametophyte defective 3 | chr... 882 0.0
AT1G68990.2 | Symbols: MGP3 | male gametophyte defective 3 | chr... 876 0.0
AT5G15700.1 | Symbols: | DNA/RNA polymerases superfamily protei... 872 0.0
AT5G15700.2 | Symbols: | DNA/RNA polymerases superfamily protei... 872 0.0
>AT2G24120.1 | Symbols: PDE319, SCA3 | DNA/RNA polymerases
superfamily protein | chr2:10249358-10254530 REVERSE
LENGTH=993
Length = 993
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/730 (65%), Positives = 582/730 (79%), Gaps = 10/730 (1%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
++ E++ + FD+LRRRQ++ ETEAW APNLP VK + LG
Sbjct: 147 LKIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLG 206
Query: 61 WFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCV 119
WF+PLK+ +E EQK + +SKK +A+ AP+++ LPA K+AVIVMHKMM LVM +E+GC+
Sbjct: 207 WFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCI 266
Query: 120 QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ--RKFVNGLIK 177
Q+VQAAV IG+A+EQEVRIH FL+ + K D++E L KEKQ RK VN LI+
Sbjct: 267 QVVQAAVSIGIAIEQEVRIHNFLKRTR----KNNAGDSQEEL---KEKQLLRKRVNSLIR 319
Query: 178 RKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
RK++ + V+K E PW RA QAKLGSRL+ELLIE AYV P+ QS D+ P+ RPAFR
Sbjct: 320 RKRIIDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFR 379
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H FK ++ PG K+++ YGVI+CD L+LAGL+K AKH K+WKGYDKGG+
Sbjct: 380 HRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGY 439
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
LFLPSYIMRTHGS+KQQD +K++ + +VFEALD LGNTK R+N +LDVVE +WA G
Sbjct: 440 LFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADG 499
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
GN+AGLV+ E+VP+P+KP +ED +++Q WK+ RKA K+N ERHS RCD ELKLSVARKM
Sbjct: 500 GNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKM 559
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
KDE+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG LEFAEGRPLGKSGL WLKIHLANL
Sbjct: 560 KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANL 619
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
YAGG+EKLS+D RL FVENH+ DI DSA+NP++G RWWL+AEDPFQCLAAC+ L++AL+S
Sbjct: 620 YAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKS 679
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
SP SVISHLPIHQDGSCNGLQHYAALGRD EAAAVNLVA EKPADVYSEI+ RVH+IM
Sbjct: 680 PSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIM 739
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
++DS+KDP + P A LAK+LI Q+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG+IT
Sbjct: 740 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIT 799
Query: 658 DDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQ 717
D+R+LF AACY+AKVTLAALGE+FEAAR IMSWLGDCAK+IA +N V W TPLGLPVVQ
Sbjct: 800 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQ 859
Query: 718 PYCKTERHLV 727
PYC++ERHL+
Sbjct: 860 PYCRSERHLI 869
>AT2G24120.2 | Symbols: PDE319, SCA3 | DNA/RNA polymerases
superfamily protein | chr2:10250139-10254530 REVERSE
LENGTH=895
Length = 895
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/730 (65%), Positives = 582/730 (79%), Gaps = 10/730 (1%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
++ E++ + FD+LRRRQ++ ETEAW APNLP VK + LG
Sbjct: 147 LKIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLG 206
Query: 61 WFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCV 119
WF+PLK+ +E EQK + +SKK +A+ AP+++ LPA K+AVIVMHKMM LVM +E+GC+
Sbjct: 207 WFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCI 266
Query: 120 QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ--RKFVNGLIK 177
Q+VQAAV IG+A+EQEVRIH FL+ + K D++E L KEKQ RK VN LI+
Sbjct: 267 QVVQAAVSIGIAIEQEVRIHNFLKRTR----KNNAGDSQEEL---KEKQLLRKRVNSLIR 319
Query: 178 RKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
RK++ + V+K E PW RA QAKLGSRL+ELLIE AYV P+ QS D+ P+ RPAFR
Sbjct: 320 RKRIIDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFR 379
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H FK ++ PG K+++ YGVI+CD L+LAGL+K AKH K+WKGYDKGG+
Sbjct: 380 HRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGY 439
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
LFLPSYIMRTHGS+KQQD +K++ + +VFEALD LGNTK R+N +LDVVE +WA G
Sbjct: 440 LFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADG 499
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
GN+AGLV+ E+VP+P+KP +ED +++Q WK+ RKA K+N ERHS RCD ELKLSVARKM
Sbjct: 500 GNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKM 559
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
KDE+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG LEFAEGRPLGKSGL WLKIHLANL
Sbjct: 560 KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANL 619
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
YAGG+EKLS+D RL FVENH+ DI DSA+NP++G RWWL+AEDPFQCLAAC+ L++AL+S
Sbjct: 620 YAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKS 679
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
SP SVISHLPIHQDGSCNGLQHYAALGRD EAAAVNLVA EKPADVYSEI+ RVH+IM
Sbjct: 680 PSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIM 739
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
++DS+KDP + P A LAK+LI Q+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG+IT
Sbjct: 740 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIT 799
Query: 658 DDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQ 717
D+R+LF AACY+AKVTLAALGE+FEAAR IMSWLGDCAK+IA +N V W TPLGLPVVQ
Sbjct: 800 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQ 859
Query: 718 PYCKTERHLV 727
PYC++ERHL+
Sbjct: 860 PYCRSERHLI 869
>AT1G68990.1 | Symbols: MGP3 | male gametophyte defective 3 |
chr1:25935499-25940755 REVERSE LENGTH=976
Length = 976
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/727 (58%), Positives = 535/727 (73%), Gaps = 12/727 (1%)
Query: 10 AETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAV 69
A+ F L++RQ++ ETE W APNLP +KSL LGWFEP++ A+
Sbjct: 129 AQKFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAI 188
Query: 70 EAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQ 127
+ + + KK + AP ++ LPA K+AVI MHKMM L+M N EG V+LV AA Q
Sbjct: 189 QDDLDTFKI--KKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQ 246
Query: 128 IGMALEQEVRIHKFLEG----NKSLQSKKTEAD--TEENLNNDKEKQRKFVNGLIKRKKL 181
IG A+EQEVRI+ FL+ N + ++ TEA+ +EE + + EK RK V L+++ KL
Sbjct: 247 IGEAVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKL 306
Query: 182 KEVH-VVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGF 240
++V +V K + PW + AQ K+G+RLI+LL+E AY+ P Q D PPDIRPAF+ F
Sbjct: 307 RQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNF 366
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFL 300
+ + K + YG I+CDPLVL GL+K A+H + W GYD+G H FL
Sbjct: 367 RTVTLE-NTKTSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFL 425
Query: 301 PSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNV 360
PSY+MRTHG+++Q+ VMK EQ++ V+EALD LGNTK +IN ++L +V+ IWA GG +
Sbjct: 426 PSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRI 485
Query: 361 AGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDE 420
GLVD E+VP+P++P ED ++ + W++ +KA K N ERHSQRCD ELKL VARKMKDE
Sbjct: 486 GGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDE 545
Query: 421 DCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAG 480
+ FYYPHN+DFRGRAYP+HP+LNHLGSDLCRG+LEF EG+PLGKSGLRWLKIH+ANLYAG
Sbjct: 546 EGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAG 605
Query: 481 GIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSP 540
G++KL+Y+ R+ F E+H+ DIFDS+D P+ G RWWL AEDPFQCLAACINLSEALRS P
Sbjct: 606 GVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFP 665
Query: 541 NSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD 600
+ ISH+PIHQDGSCNGLQHYAALGRD+L A AVNLV EKPADVY+EIA RV IM++D
Sbjct: 666 EAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQD 725
Query: 601 SNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR 660
+ +DP TFPNA AK+++DQ+DRKLVKQTVMTSVYGVTY GARDQIKKRL+E+G DD
Sbjct: 726 AEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDS 785
Query: 661 LLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYC 720
L F A+CYAAK+TL AL E+FEAAR I SW GDCAK+IA EN AV WTTPLGLPVVQPY
Sbjct: 786 LTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYR 845
Query: 721 KTERHLV 727
K RHLV
Sbjct: 846 KPGRHLV 852
>AT1G68990.2 | Symbols: MGP3 | male gametophyte defective 3 |
chr1:25935499-25940755 REVERSE LENGTH=983
Length = 983
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/734 (58%), Positives = 535/734 (72%), Gaps = 19/734 (2%)
Query: 10 AETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAV 69
A+ F L++RQ++ ETE W APNLP +KSL LGWFEP++ A+
Sbjct: 129 AQKFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAI 188
Query: 70 EAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQ 127
+ + + KK + AP ++ LPA K+AVI MHKMM L+M N EG V+LV AA Q
Sbjct: 189 QDDLDTFKI--KKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQ 246
Query: 128 IGMALEQEVRIHKFLEG----NKSLQSKKTEAD--TEENLNNDKEKQRKFVNGLIKRKKL 181
IG A+EQEVRI+ FL+ N + ++ TEA+ +EE + + EK RK V L+++ KL
Sbjct: 247 IGEAVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKL 306
Query: 182 KEVH-VVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGF 240
++V +V K + PW + AQ K+G+RLI+LL+E AY+ P Q D PPDIRPAF+ F
Sbjct: 307 RQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNF 366
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVLAGLEKC-------AKHXXXXXXXXXXXXKKWKGYD 293
+ + K + YG I+CDPLVL GL+K A+H + W GYD
Sbjct: 367 RTVTLE-NTKTSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQNWTGYD 425
Query: 294 KGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESI 353
+G H FLPSY+MRTHG+++Q+ VMK EQ++ V+EALD LGNTK +IN ++L +V+ I
Sbjct: 426 QGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRI 485
Query: 354 WAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSV 413
WA GG + GLVD E+VP+P++P ED ++ + W++ +KA K N ERHSQRCD ELKL V
Sbjct: 486 WANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEV 545
Query: 414 ARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIH 473
ARKMKDE+ FYYPHN+DFRGRAYP+HP+LNHLGSDLCRG+LEF EG+PLGKSGLRWLKIH
Sbjct: 546 ARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIH 605
Query: 474 LANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSE 533
+ANLYAGG++KL+Y+ R+ F E+H+ DIFDS+D P+ G RWWL AEDPFQCLAACINLSE
Sbjct: 606 IANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSE 665
Query: 534 ALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRV 593
ALRS P + ISH+PIHQDGSCNGLQHYAALGRD+L A AVNLV EKPADVY+EIA RV
Sbjct: 666 ALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARV 725
Query: 594 HDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK 653
IM++D+ +DP TFPNA AK+++DQ+DRKLVKQTVMTSVYGVTY GARDQIKKRL+E+
Sbjct: 726 LKIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKER 785
Query: 654 GLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGL 713
G DD L F A+CYAAK+TL AL E+FEAAR I SW GDCAK+IA EN AV WTTPLGL
Sbjct: 786 GTFEDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGL 845
Query: 714 PVVQPYCKTERHLV 727
PVVQPY K RHLV
Sbjct: 846 PVVQPYRKPGRHLV 859
>AT5G15700.1 | Symbols: | DNA/RNA polymerases superfamily protein |
chr5:5115793-5121609 REVERSE LENGTH=1011
Length = 1011
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/720 (59%), Positives = 532/720 (73%), Gaps = 11/720 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
F L RRQ++ ETE W APNLP VKSL LGWFEPL++A+ +
Sbjct: 174 FQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKD 233
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMA 131
Q+ + R K +A+ A +D LPA K++VI MHK+M +M + GCV++V AA +G A
Sbjct: 234 QELY--RLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVKVVHAACTVGDA 291
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTE-ENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQ 190
+EQE+RI FL+ K + E E +++K RK VN LIK++KL V +L+
Sbjct: 292 IEQEIRICTFLDKKKKGDDNEESGGVENETSMKEQDKLRKKVNELIKKQKLSAVRKILQS 351
Query: 191 EEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFK--PQSRSP 247
+ + PW +AK+GSRLIELL+ TAY+ SP +Q + PD+RPAF H FK S +
Sbjct: 352 HDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFKVAKGSMNS 411
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
G+K YGVI+CDPLV GLEK ++ KW GYDKG +LFL SYIM+T
Sbjct: 412 GRK----YGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKT 467
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HG+++Q++ +K+ Q+Q VFEALD LG+TK R+N R+L VV+ IW+ GG VA +VD
Sbjct: 468 HGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRS 527
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+VPLP+KP TED +++WK+ V+ AKK+N ERHSQRCDTELKLSVARKMKDE+ FYYPH
Sbjct: 528 DVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPH 587
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
N+DFRGRAYPM PHLNHLGSDLCRG+LEFAEGRP+G SGLRWLKIHLANLYAGG++KLS
Sbjct: 588 NMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSL 647
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGRL F ENH+ DIFDSAD P+ G+RWWL+AEDPFQCLA CI+L+EALRS SP +V+SH+
Sbjct: 648 DGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHI 707
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
PIHQDGSCNGLQHYAALGRD L A AVNLVA EKPADVYS IA RV DIMRRD+++DP
Sbjct: 708 PIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEV 767
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
FP AL A+ L++Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ D++ +F AAC
Sbjct: 768 FPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAAC 827
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
YAAKVTLAA+ E+F+AAR IM W G+CAK+IA EN+ V WTTPLGLPVVQPY + LV
Sbjct: 828 YAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLV 887
>AT5G15700.2 | Symbols: | DNA/RNA polymerases superfamily protein |
chr5:5115572-5121609 REVERSE LENGTH=1051
Length = 1051
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/720 (59%), Positives = 532/720 (73%), Gaps = 11/720 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
F L RRQ++ ETE W APNLP VKSL LGWFEPL++A+ +
Sbjct: 174 FQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKD 233
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMA 131
Q+ + R K +A+ A +D LPA K++VI MHK+M +M + GCV++V AA +G A
Sbjct: 234 QELY--RLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVKVVHAACTVGDA 291
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTE-ENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQ 190
+EQE+RI FL+ K + E E +++K RK VN LIK++KL V +L+
Sbjct: 292 IEQEIRICTFLDKKKKGDDNEESGGVENETSMKEQDKLRKKVNELIKKQKLSAVRKILQS 351
Query: 191 EEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFK--PQSRSP 247
+ + PW +AK+GSRLIELL+ TAY+ SP +Q + PD+RPAF H FK S +
Sbjct: 352 HDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFKVAKGSMNS 411
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
G+K YGVI+CDPLV GLEK ++ KW GYDKG +LFL SYIM+T
Sbjct: 412 GRK----YGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKT 467
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HG+++Q++ +K+ Q+Q VFEALD LG+TK R+N R+L VV+ IW+ GG VA +VD
Sbjct: 468 HGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRS 527
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+VPLP+KP TED +++WK+ V+ AKK+N ERHSQRCDTELKLSVARKMKDE+ FYYPH
Sbjct: 528 DVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPH 587
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
N+DFRGRAYPM PHLNHLGSDLCRG+LEFAEGRP+G SGLRWLKIHLANLYAGG++KLS
Sbjct: 588 NMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSL 647
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGRL F ENH+ DIFDSAD P+ G+RWWL+AEDPFQCLA CI+L+EALRS SP +V+SH+
Sbjct: 648 DGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHI 707
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
PIHQDGSCNGLQHYAALGRD L A AVNLVA EKPADVYS IA RV DIMRRD+++DP
Sbjct: 708 PIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEV 767
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
FP AL A+ L++Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ D++ +F AAC
Sbjct: 768 FPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAAC 827
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
YAAKVTLAA+ E+F+AAR IM W G+CAK+IA EN+ V WTTPLGLPVVQPY + LV
Sbjct: 828 YAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLV 887