Miyakogusa Predicted Gene

Lj0g3v0122759.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0122759.1 Non Chatacterized Hit- tr|J3LDG8|J3LDG8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G2,56.32,4e-19,DUF4137,Putative sodium bile acid cotransporter;
GB DEF: HYPOTHETICAL PROTEIN F18O21_120,NULL; FAMIL,CUFF.7343.1
         (154 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G56160.1 | Symbols:  | Sodium Bile acid symporter family | ch...    70   7e-13

>AT3G56160.1 | Symbols:  | Sodium Bile acid symporter family |
           chr3:20837733-20841541 REVERSE LENGTH=436
          Length = 436

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%)

Query: 79  WAEPIFRFARSNXXXXXXXXXXXXXXXYPSLGCAVDKYNVSKLGPFGIFVISGLLLRSEE 138
           + + +  FA  N                P+LGC  DKY+ +K+   GIF+ISGL LR+E 
Sbjct: 97  FGKELLSFASDNFLPLALVSGVGLGFANPTLGCLADKYSFTKISTCGIFIISGLTLRTEA 156

Query: 139 IGAALEAWPVGLFGLV 154
           IGAA++ WP+GLFGL+
Sbjct: 157 IGAAVKGWPLGLFGLI 172