Miyakogusa Predicted Gene
- Lj0g3v0122299.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0122299.1 Non Chatacterized Hit- tr|D8RIJ4|D8RIJ4_SELML
Putative uncharacterized protein OS=Selaginella moelle,27.1,9e-19,no
description,Tetratricopeptide-like helical; PPR_2,Pentatricopeptide
repeat; PPR,Pentatricopeptide,CUFF.7309.1
(337 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 2e-99
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 117 1e-26
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 7e-26
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 1e-25
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 9e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 109 3e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 106 2e-23
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 105 4e-23
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 7e-23
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 7e-23
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 9e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 3e-22
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 6e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 6e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 9e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 9e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 5e-21
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 6e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 9e-21
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 95 6e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 8e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 94 2e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 4e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 92 4e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 89 6e-18
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 1e-17
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 86 3e-17
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 85 6e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 4e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 82 6e-16
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 82 8e-16
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 8e-16
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 80 3e-15
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 3e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 7e-14
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 73 3e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 73 3e-13
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 72 7e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 9e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 71 1e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 70 1e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 70 2e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 69 5e-12
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 66 3e-11
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 3e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 63 3e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 59 4e-09
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 57 1e-08
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 2e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 2e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 57 3e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 7e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 8e-08
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 1e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 54 1e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 53 3e-07
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 53 3e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 53 3e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 52 6e-07
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 6e-07
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 52 7e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 50 2e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 50 2e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 4e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 359 bits (921), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/331 (52%), Positives = 236/331 (71%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
ILN+L+ F KLGK KAA +VF K E F PN+ TYYLT+EAL +RS DWA VC+KM
Sbjct: 233 ILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM 292
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
L + + E +G+++ W CK K +EA++VY+ A K P ++ L+ L + + T
Sbjct: 293 LKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGT 352
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A E+L ++ G+ R K F V+ +LCR+++V AK L+L+MI+ GP PGNAVFN
Sbjct: 353 ITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
V+ K G++++A E++KL+ESRGL+PDVYTY VI SGY+ GG M+ A++IL EAKKKH
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 472
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
L+PV YH+LIRGYCK+E++DEA+KLL EM FGV+ N DEY+KLIQS CLKA+DWE A
Sbjct: 473 KKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKA 532
Query: 303 EKLHAELKENGLYLKGATRALIRAVKEMENE 333
E L E+K+ GL+L ++ LIRAVKEME+E
Sbjct: 533 EVLFEEMKQKGLHLNAISQGLIRAVKEMESE 563
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 148/321 (46%), Gaps = 3/321 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ S K G AL +F + E+ + + TY I L +D + ++M+
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
IP+ + L+ K KL EA +Y I G P N L+ +EN + A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN-CLHEA 369
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++ + E + ++ + C+ K V +L E+ + G P +N ++ G
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+C++G++ A E+ + + SRG+ P V TY ++ G + GE+ A +I E+ +K L
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
IY+ +I G C + D+A L + + GV+ +V Y+ +I LC K A+ L
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG-SLSEADMLF 548
Query: 307 AELKENGLYLKGAT-RALIRA 326
++KE+G T LIRA
Sbjct: 549 RKMKEDGCTPDDFTYNILIRA 569
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 135/308 (43%), Gaps = 12/308 (3%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+F+FS LG+ EP++ T+ + A+ + +M++ +
Sbjct: 121 LLFAFSVLGRAWK----------LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ +V L+ LC ++ EA + +E G P ++ +L + + LA
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS-ALA 229
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
L++ +++ + + ++ V+ +LC+ A L EM G ++ +I G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
C G+ + +M++ + R + PDV T++ + + G++ A+++ E +
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
+ Y+SLI G+CK EA ++ M G ++ Y LI S C KA + +L
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC-KAKRVDDGMRLF 408
Query: 307 AELKENGL 314
E+ GL
Sbjct: 409 REISSKGL 416
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 103/235 (43%), Gaps = 1/235 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F K A ++F+ CEP+ TY + I + + D + + +++
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
IP + L++ C+ KL A +++ + G P + L+ L E +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE-LN 472
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
ALE+ +++ R L + ++ +C V A L + G P +N +I
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
G CK G + +A + + ++ G PD +TY ++ + G + ++ +++EE K
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 1/292 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ F K GK A E++ + P++ TY I+ + + A + M+
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ + L+ CK K++ + +++ G P N LV Q + + A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK-LNAA 439
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
E+ +E+ + + ++ LC ++ A ++ +M G ++N +I G
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
C A +++ A + L +G++PDV TY V+ G G + A + + K+
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
Y+ LIR + +V+L+ EMK G + +I L + +D
Sbjct: 560 DFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLD 611
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%)
Query: 158 VGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAV 217
V A L MI P P FN + + + + + + K +E G+ D+YT +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 218 IASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
+ + Y ++ A +L A K + + +L+ G+C + EAV L+ M E
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 278 VRVNVDEYDKLIQSLCLKA 296
R ++ LI LCLK
Sbjct: 171 QRPDLVTVSTLINGLCLKG 189
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 137/295 (46%), Gaps = 2/295 (0%)
Query: 20 ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLV 79
A VF++ Q PN FTY + I D AL + KM +P + L+
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRE 139
CK +K+ + + ++ G P + N ++ L +E ++ VL E+
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF-VLTEMNRRGYS 307
Query: 140 LAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEM 199
L + + +++ C+ + A + EM+ G P + +I CKAG M +A+E
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 200 MKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCK 259
+ + RGL P+ TY + G+S G M A ++L E + V Y++LI G+C
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 260 MEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+ ++A+ +L +MKE G+ +V Y ++ C ++ D + A ++ E+ E G+
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC-RSYDVDEALRVKREMVEKGI 481
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 140/310 (45%), Gaps = 2/310 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ + KL K ++ + EPN +Y + I L R V +M
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+ + L+ CK +A ++ + G P + L+ + + +
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG-NMN 362
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A+E L ++ ++ + +V + + A +++ EM +G P +N +I
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G+C G+ME A+ +++ ++ +GL PDV +Y+ + SG+ +++ A ++ E +K
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
+ Y SLI+G+C+ + EA L EM G+ + Y LI + C++ D E A +
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG-DLEKALQ 541
Query: 305 LHAELKENGL 314
LH E+ E G+
Sbjct: 542 LHNEMVEKGV 551
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 18/339 (5%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ S K G A+E ++ V PN TY ++ ++ + A V ++M D
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ C K+++A AV + E G P + + +++ + + V A
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD-VDEA 469
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
L V +E+ + + ++++ C + A L EM+ G PP + +I
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
YC G++E+A+++ + +G+ PDV TY+V+ +G + A+++L + + SV +
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 247 PVIYH---------------SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
V YH SLI+G+C EA ++ M + + Y+ +I
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 292 LCLKAMDWETAEKLHAELKENGLYLKGATR-ALIRAVKE 329
C +A D A L+ E+ ++G L T AL++A+ +
Sbjct: 650 HC-RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 9/257 (3%)
Query: 66 RSIPEWY-------SVGDLLV-WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS 117
+S+ E Y SV DL+V + + +A ++ A G P + N ++
Sbjct: 121 KSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI 180
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
+ + A V KE+ + + ++R C ++ A L +M G P
Sbjct: 181 RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 240
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
+N +I GYCK +++ ++++ + +GL P++ +Y V+ +G G M+ +L E
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
++ L V Y++LI+GYCK F +A+ + EM G+ +V Y LI S+C KA
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC-KAG 359
Query: 298 DWETAEKLHAELKENGL 314
+ A + +++ GL
Sbjct: 360 NMNRAMEFLDQMRVRGL 376
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 115/276 (41%), Gaps = 16/276 (5%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ GK + A+ V E + P+ +Y + R D AL V ++M++
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P+ + L+ C+ ++ KEA +Y+ + +G P L+ E + +
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD-LE 537
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
AL++ E+ + ++ L + AK+L+L++ + P + ++ +I
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 185 ---------------TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEME 229
G+C G M +A ++ + + + +PD Y ++ G+ G++
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 230 AARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDE 265
A + +E K +L V +L++ K + +E
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 3/289 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + +K+ K + EK E+ N +TY + I L RRS +AL + KM+
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE-TVPL 125
P ++ LL C G ++ EA A+ +E+G P LV L Q N+ + +
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
AL + G + +L + AV+ LC+ + A L+ +M +++ VI
Sbjct: 191 ALVERMVVKGCQPDLVT--YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
CK ++ A+ + ++++G+RPDV+TY+ + S N G A ++L + ++
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
V ++SLI + K + EA KL EM + + N+ Y+ LI C+
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 125/287 (43%), Gaps = 1/287 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
LV + K A+ + E+ V C+P+ TY I L +R D AL + KM +
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+ ++ LCK + + +A ++ G P + + L++ L A
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD-A 294
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+L ++ + F +++ A + + A++L EMI P +N +I G
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING 354
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+C +++A ++ L+ S+ PDV TY + +G+ ++ ++ + ++ V
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
V Y +LI G+ + D A + +M GV N+ Y+ L+ LC
Sbjct: 415 TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 2/260 (0%)
Query: 52 FDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINF 111
D A+ + +M+ +R P LL + K KK + + LG + N
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 112 LVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD 171
++ L + ++ + AL +L ++ + +++ C + A L+ +M+
Sbjct: 106 MINCLCRRSQ-LSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P F ++ G + + +AV +++ + +G +PD+ TY + +G GE + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+L + +K VIY ++I CK D+A+ L TEM G+R +V Y LI
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 292 LCLKAMDWETAEKLHAELKE 311
LC W A +L +++ E
Sbjct: 285 LCNYGR-WSDASRLLSDMLE 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 141/335 (42%), Gaps = 23/335 (6%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I + ++ S K AL +F + + P+ FTY I L + A + M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKL------ 116
L+ + P + L+ K KL EA ++ I+ P + N L+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 117 --SQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPP 174
+Q+ T+ ++ + L ++ + ++ C+ K V +L +M G
Sbjct: 362 DEAQQIFTLMVSKDCLPDVV---------TYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
+ +I G+ +A + + A + K + S G+ P++ TY + G G++E A +
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 235 LEEAKKKHSVLTPVI--YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
E +K S + P I Y+ + G CK + ++ L + GV+ +V Y+ +I
Sbjct: 473 FEYLQK--SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 293 CLKAMDWETAEKLHAELKENG-LYLKGATRALIRA 326
C K + E A L ++KE+G L G LIRA
Sbjct: 531 CKKGLK-EEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 113/272 (41%), Gaps = 1/272 (0%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ +F+K GK A ++F++ +PN TY I D A + M+
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+P+ + L+ CK KK+ + +++ G L+ Q ++
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD-C 431
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
A V K++ D + ++ LC+ + A + + P +N +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
G CKAG++E ++ L +G++PDV Y + SG+ G E A + + K+
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKE 275
+ Y++LIR + + + +L+ EM+
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 1/221 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F K K +E+F N+ TY I ++ S D A V ++M+
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P + LL LCK KL++A V++ ++ K P Y ++++ + V
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY-LQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
++ + + + ++ C+ A L ++M DGP P + +N +I
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNG 225
+ + G+ + E++K + S D TY ++ +G
Sbjct: 563 RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 151/346 (43%), Gaps = 40/346 (11%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + +K+ K + + E+ + N +TY + I RRS AL + KM+
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE-TVPL 125
P ++ LL C G ++ EA A+ +E+G P LV L Q N+ + +
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
AL + G + +L + AV+ LC+ + A L+ +M ++N +I
Sbjct: 201 ALVERMVVKGCQPDLVT--YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKIL---------- 235
G CK M+ A ++ +E++G++PDV+TY + S N G A ++L
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 236 --------------------------EEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
E K KH V Y++LI+G+CK ++ +E +++
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 270 LTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLY 315
EM + G+ N Y LI +A D + A+ + ++ +G++
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGF-FQARDCDNAQMVFKQMVSDGVH 423
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 139/327 (42%), Gaps = 14/327 (4%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ K G+ AL + K E + E + Y I+ L + D A + KM
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ ++ L+ LC + +A + +E P + + N L+ +E + V
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE-- 338
Query: 127 LEVLKEIPGDRRELAKKRFPAVV------RALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
E D +K FP VV + C+ K V ++ EM G +
Sbjct: 339 ----AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+I G+ +A + + A + K + S G+ PD+ TY ++ G N G +E A + E +K
Sbjct: 395 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK 454
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+ L V Y ++I CK + ++ L + GV+ NV Y ++ C K + E
Sbjct: 455 RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK-E 513
Query: 301 TAEKLHAELKENG-LYLKGATRALIRA 326
A+ L E+KE+G L G LIRA
Sbjct: 514 EADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 140/325 (43%), Gaps = 7/325 (2%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ K A ++F K E +P+ FTY I L + A + M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGK-YPPMPYINFLVAKLSQENE 121
L+ P+ L+ K KL EA +Y ++ +P + N L+ + +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY-K 370
Query: 122 TVPLALEVLKEIPGDRRELAKK--RFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
V +EV +E+ +R L + ++ + +D A+ + +M++DG P
Sbjct: 371 RVEEGMEVFREMS--QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N ++ G C G +E A+ + + ++ R ++ D+ TY + G++E +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
K V Y +++ G+C+ +EA L EMKE G N Y+ LI++ L+ D
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR-LRDGDE 547
Query: 300 ETAEKLHAELKENGLYLKGATRALI 324
+ +L E++ G +T L+
Sbjct: 548 AASAELIKEMRSCGFAGDASTFGLV 572
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 64/132 (48%)
Query: 161 AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIAS 220
A L +M+ P P F+ +++ K + + + + + +++ G+ ++YTY++ +
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 221 GYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRV 280
+ ++ A IL + K + V +SL+ G+C + EAV L+ +M E G +
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 281 NVDEYDKLIQSL 292
+ + L+ L
Sbjct: 179 DTVTFTTLVHGL 190
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 145/324 (44%), Gaps = 36/324 (11%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ S GK K A+EV ++ C P+ TY + IEA R S A+ + +M D
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEA-------------------HAVYKAAIELGKY-- 103
P+ + L+ +CK +L EA + + ++ G++
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 104 --------------PPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVV 149
P + N L+ L ++ + A+++L+++P + + ++
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKG-LLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 150 RALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLR 209
C+ K + A + + M++ G P +N ++T CK G++E AVE++ L S+G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 210 PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
P + TY + G + G+ A K+L+E + K + Y SL+ G + + DEA+K
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 270 LTEMKEFGVRVNVDEYDKLIQSLC 293
E + G+R N ++ ++ LC
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLC 530
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 42/294 (14%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ F +LGK + A ++ E E P+ TY + I + + AL V LD
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV----LDRM 198
Query: 67 SI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPL 125
S+ P+ + +L LC KLK+A V ++ YP + I + +
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV--ITYTI------------ 244
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
++ A CR VG A +L+ EM G P +N ++
Sbjct: 245 ----------------------LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
G CK G +++A++ + + S G +P+V T+ +I + G A K+L + +K
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL-KAMD 298
+ V ++ LI C+ A+ +L +M + G + N Y+ L+ C K MD
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 149 VRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL 208
+R + R ++ + + M+ G P +I G+C+ G+ +A +++++LE G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVK 268
PDV TY V+ SGY GE+ A +L+ V+T Y++++R C + +A++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVT---YNTILRSLCDSGKLKQAME 225
Query: 269 LLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
+L M + +V Y LI++ C + A KL E+++ G
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATC-RDSGVGHAMKLLDEMRDRG 269
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 142/340 (41%), Gaps = 37/340 (10%)
Query: 10 SFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIP 69
++ + GK + A+ VFE+ + + CEP F+Y + L FD A V +M D P
Sbjct: 85 NYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITP 144
Query: 70 EWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEV 129
+ YS + CK + A + G + +V +EN E+
Sbjct: 145 DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE-GYEL 203
Query: 130 LKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCK 189
++ L F ++R LC+ DV ++L+ ++I G P +N I G C+
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263
Query: 190 AGEMEQAVEMMKLLESRGLRPDV-----------------------------------YT 214
GE++ AV M+ L +G +PDV YT
Sbjct: 264 RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYT 323
Query: 215 YAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
Y + +GY GG ++ A +I+ +A V Y SLI G C + + A+ L E
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 275 EFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
G++ NV Y+ LI+ L + M E A+ L E+ E GL
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQ-LANEMSEKGL 422
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 12/312 (3%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N+L++ K K + A K EP+S+TY I + A + +
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN---E 121
+P+ ++ L+ LC + A A++ A+ G P + N L+ LS + E
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 122 TVPLALEVLKE--IPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
LA E+ ++ IP + F +V LC++ V A L+ MI+ G P
Sbjct: 410 AAQLANEMSEKGLIP------EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
FN +I GY +ME A+E++ ++ G+ PDVYTY + +G + E + +
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+K ++ L+ C+ + DEA+ LL EMK V + + LI C K D
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC-KNGDL 582
Query: 300 ETAEKLHAELKE 311
+ A L +++E
Sbjct: 583 DGAYTLFRKMEE 594
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 36/295 (12%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
PN FTY L I+ L +R D A+ + +++ P+ + +L+ LCK K +EA
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 94 YKAAIELGKYPPMPYINFLVA-----------------------------------KLSQ 118
+ G P N L+A L
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 119 ENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
E ET AL + E G + + +++ L + A QL EM G P
Sbjct: 369 EGET-NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
FN ++ G CK G + A ++K++ S+G PD++T+ ++ GYS +ME A +IL+
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
Y+SL+ G CK +F++ ++ M E G N+ ++ L++SLC
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 108/274 (39%), Gaps = 37/274 (13%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P+ FT+ + I + + AL + MLD P+ Y+ LL LCK K ++
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 94 YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALC 153
YK +E G P + N L+ +LC
Sbjct: 519 YKTMVEKGCAPNLFTFNILL------------------------------------ESLC 542
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMM-KLLESRGLRPDV 212
R + + A L+ EM P F +I G+CK G+++ A + K+ E+ +
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
TY +I ++ + A K+ +E + Y ++ G+CK + K L E
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Query: 273 MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
M E G ++ ++I LC++ +E A +H
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 7/257 (2%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N L+ K K + +E ++ C PN FT+ + +E+L R D AL + +
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKY-PPMPYINFLVAKLSQE 119
+M + P+ + G L+ CK L A+ +++ E K P N ++ + E
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT-E 614
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
V +A ++ +E+ + +V C+ +V + +LEM+ +G P
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
VI C + +A ++ + +GL P+ AV + E+ A + +LE+
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE----AVNTICDVDKKEVAAPKLVLEDLL 730
Query: 240 KKHSVLTPVIYHSLIRG 256
KK S +T Y L G
Sbjct: 731 KK-SCITYYAYELLFDG 746
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 108/283 (38%), Gaps = 45/283 (15%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N L+ +S K + ALE+ + +P+ +TY + L + S F+ + +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
M++ P ++ LL LC+ +KL E
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDE------------------------------- 549
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEM-----IADGPPP 175
AL +L+E+ F ++ C+ D+ A L +M ++ P
Sbjct: 550 -----ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP- 603
Query: 176 GNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKIL 235
+N +I + + + A ++ + + R L PD YTY ++ G+ G + K L
Sbjct: 604 ---TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Query: 236 EEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
E + + + +I C ++ EA ++ M + G+
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 143/309 (46%), Gaps = 7/309 (2%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
LV+ K+ + + LE+ ++ + P+ +E L +R + AL + ++++D
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ LCKG+K EA ++ ++G P + L+ + + + A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK-LDTA 421
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
L L E+ +L+ + +++ C+ D+ A+ M EMI P + ++ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
YC G++ +A+ + + +G+ P +YT+ + SG G + A K+ E + +
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
V Y+ +I GYC+ +A + L EM E G+ + Y LI LCL T +
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL------TGQASE 595
Query: 307 AELKENGLY 315
A++ +GL+
Sbjct: 596 AKVFVDGLH 604
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 135/314 (42%), Gaps = 2/314 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+++ N L+ S K K A +F++ PN TY + I+ RR D AL
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M+D Y L+ CK + A I P + L+ +
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ + AL + E+ G + F ++ L R + A +L EM P +
Sbjct: 487 K-INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I GYC+ G+M +A E +K + +G+ PD Y+Y + G G+ A+ ++ K
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+ L + Y L+ G+C+ + +EA+ + EM + GV +++ Y LI LK D +
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG-SLKHKDRK 664
Query: 301 TAEKLHAELKENGL 314
L E+ + GL
Sbjct: 665 LFFGLLKEMHDRGL 678
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 4/277 (1%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P T + L + F A+ + M+ P+ Y ++ LC+ K L A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 94 YKAAIELG-KYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
G +PY N L+ L ++ + V A+ + K++ G + + +V L
Sbjct: 250 IAHMEATGCDVNIVPY-NVLIDGLCKK-QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
C+V++ ++M EM+ P A + ++ G K G++E+A+ ++K + G+ P++
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
+ Y + G + A + + K V Y LI +C+ + D A+ L E
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 273 MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAEL 309
M + G++++V Y+ LI C K D AE AE+
Sbjct: 428 MVDTGLKLSVYPYNSLINGHC-KFGDISAAEGFMAEM 463
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 1/218 (0%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I ++ + SK G K A +++ C PN TY I L + + A +C KM
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
S+P + G L L KG+ + AI G N L+ ++
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR- 802
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A E++ + GD + ++ LCR DV A +L M G P +N
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIAS 220
+I G C AGEM +A E+ + +GL P+ T S
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 142/350 (40%), Gaps = 39/350 (11%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y L+ + G + A+++F + + +PN TY + IE A +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 61 KMLDARSIPEWYSVGDLLVWLC----------------KGK------------------- 85
+M + +P+ YS L+ LC KG
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Query: 86 KLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRF 145
KL+EA +V + ++ G + L+ S +++ L +LKE+ + +
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDG-SLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 146 PAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLES 205
+++ A + D A + MI +G P + VI G CKAG + +A + ++
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 206 RGLRPDVYTYAVIASGYSNGGEMEAARKI-LEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
P+ TY + G E++ + + L A K + Y+ LIRG+C+ + +
Sbjct: 746 VSSVPNQVTYGCFLDILTKG-EVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
EA +L+T M GV + Y +I LC + D + A +L + E G+
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELC-RRNDVKKAIELWNSMTEKGI 853
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 131/366 (35%), Gaps = 46/366 (12%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N L+ K G AA + + EP TY + + + AL +
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M P Y+ LL L + +++A ++ E P N ++ +E
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ + A E LKE+ + ++ LC AK + DG GN
Sbjct: 557 D-MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-----VFVDGLHKGNCEL 610
Query: 181 NFV-----ITGYCKAGEMEQAVE-----------------------------------MM 200
N + + G+C+ G++E+A+ ++
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 201 KLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKM 260
K + RGL+PD Y + S G+ + A I + + V V Y ++I G CK
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 261 EQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT 320
+EA L ++M+ N Y + L +D + A +LH + + L
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 321 RALIRA 326
LIR
Sbjct: 791 NMLIRG 796
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 113/316 (35%), Gaps = 38/316 (12%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
Y L+ G+ A + CE N Y + R + AL VCQ+
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP-MPYINFLVAKLSQEN 120
M+ + G L+ K K K + K + G P + Y + + AK +
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK--SKT 695
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEM------------ 168
A + + + + + AV+ LC+ V A+ L +M
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 169 -----------------------IADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLES 205
I G A +N +I G+C+ G +E+A E++ +
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 206 RGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDE 265
G+ PD TY + + +++ A ++ +K V Y++LI G C + +
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 266 AVKLLTEMKEFGVRVN 281
A +L EM G+ N
Sbjct: 876 ATELRNEMLRQGLIPN 891
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 2/323 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ K G K E++EK + PN +TY + L + A V +M +
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+ L+ LC+ KL EA+ V G P + N L+ + + A
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK-LGKA 357
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
L + +++ + + +V CR D A +++ EM G P + +I
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+ ++ ME+A+++ +E GL PDV+TY+V+ G+ G+M A ++ + +K+
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
VIY+++I GYCK A+KLL EM+E + NV Y +I+ LC K + AE+L
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC-KERKSKEAERLV 536
Query: 307 AELKENGLYLKGATRALIRAVKE 329
++ ++G+ + +LI K
Sbjct: 537 EKMIDSGIDPSTSILSLISRAKN 559
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ ++ C+ ++ AK L EM G + +I G K G +Q EM + ++
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G+ P++YTY + + G + A ++ +E +++ V Y++LI G C+ + +
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLY--------- 315
EA K++ +MK G+ N+ Y+ LI C A L +LK GL
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFC-GVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 316 -----LKGATRALIRAVKEME 331
KG T + VKEME
Sbjct: 380 VSGFCRKGDTSGAAKMVKEME 400
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 5/180 (2%)
Query: 139 ELAKKRF---PAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQ 195
E +K +F ++ + + + + + EM+ +G PG+ FN+++T + Q
Sbjct: 88 ETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQ 147
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
+S+ + DVY++ ++ G GE+E + +L E + VIY +LI
Sbjct: 148 WWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLID 206
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLY 315
G CK + ++A L EM + G+ N Y LI L + + E ++ +++E+G++
Sbjct: 207 GCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE-MYEKMQEDGVF 265
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 86/181 (47%), Gaps = 5/181 (2%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N LV F + G A ++ ++ E +P+ TY + I+ R + A+ + M +
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+P+ ++ L+ C ++ EA ++K+ +E P N ++ +E +
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 125 LALEVLKEIPGDRRELAKK--RFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
AL++LKE+ + +ELA + ++ LC+ + A++L+ +MI G P ++ +
Sbjct: 497 -ALKLLKEM--EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSL 553
Query: 183 V 183
+
Sbjct: 554 I 554
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 145/324 (44%), Gaps = 18/324 (5%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ S K + A + F++ E PN TY + L S + A + M+
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVA------KLSQ 118
+ P + LL K K+ EA +++ + + P + + L+ ++ +
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 119 ENETVPLALE--VLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
N+ L + L ++ + ++ C+ K V +L EM G
Sbjct: 314 ANQMFDLMVSKGCLADVVS---------YNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+N +I G+ +AG++++A E ++ G+ PD++TY ++ G + GE+E A I E
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+ +K+ L V Y ++IRG CK + +EA L + G++ ++ Y ++ LC K
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 297 MDWETAEKLHAELKENGLYLKGAT 320
+ E E L+ ++K+ GL T
Sbjct: 485 LLHE-VEALYTKMKQEGLMKNDCT 507
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 148/313 (47%), Gaps = 6/313 (1%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ + KL K + + +K EV + +T+ + I AL + KML
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
P+ ++G L+ C+ ++ +A ++ +E+G P + N ++ L + + V
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK-TKRV 206
Query: 124 PLALEVLKEI--PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
A + KEI G R + + A+V LC A +L+ +MI P ++
Sbjct: 207 NDAFDFFKEIERKGIRPNVVT--YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
++ + K G++ +A E+ + + + PD+ TY+ + +G ++ A ++ + K
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
+ V Y++LI G+CK ++ ++ +KL EM + G+ N Y+ LIQ +A D +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF-FQAGDVDK 383
Query: 302 AEKLHAELKENGL 314
A++ +++ G+
Sbjct: 384 AQEFFSQMDFFGI 396
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 1/240 (0%)
Query: 55 ALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVA 114
A+ + M+ +R P LL + K KK ++ K LG + N ++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 115 KLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPP 174
+ V LAL +L ++ E + ++V CR V A L+ +M+ G
Sbjct: 129 CFCCCFQ-VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
P +N +I CK + A + K +E +G+RP+V TY + +G N A ++
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 235 LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
L + KK + Y +L+ + K + EA +L EM + ++ Y LI LCL
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 134/281 (47%), Gaps = 2/281 (0%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P+ Y++ + +++ + + +M P Y ++ LC+ K++EA +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 94 YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALC 153
++ + G P + + ++ + V A + KEI F +V C
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTG-NVRQAYGLYKEILVAELLPNVVVFGTLVDGFC 315
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVY 213
+ +++ TA+ L + M+ G P V+N +I G+CK+G M +AV ++ +ES L PDV+
Sbjct: 316 KARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 214 TYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
TY ++ +G ++ A ++ ++ K + + Y+SLI GYCK ++A+ L +EM
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 274 KEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
GV N+ + LI C D + A L+ E+ G+
Sbjct: 436 TASGVEPNIITFSTLIDGYC-NVRDIKAAMGLYFEMTIKGI 475
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 1/292 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+YI + + K + A ++FE + PN +TY I+ + A + +
Sbjct: 234 VYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK 293
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
++L A +P G L+ CK ++L A +++ ++ G P + N L+ +
Sbjct: 294 EILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSG 353
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ A+ +L E+ + ++ LC V A +L +M + P +A +
Sbjct: 354 NMLE-AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I GYCK MEQA+++ + + G+ P++ T++ + GY N +++AA + E
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
K V V Y +LI + K EA++L ++M E G+ N + L+
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 1/288 (0%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ LV F K + A +F F +PN + Y I + A+ + +M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
P+ ++ L+ LC ++ EA+ +++ +P N L+ +E
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE-YN 424
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ AL++ E+ E F ++ C V+D+ A L EM G P +
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I + K M++A+ + + G+ P+ +T+A + G+ G + A +E ++
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
S V + LI G C+ A + ++M+ G+ ++ Y +++
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLK 592
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 168 MIADGPPPGNAVFNFVITGYC-KAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGG 226
MI+ G P ++ FV+ C K G + +++ + S G++P+VY Y +
Sbjct: 190 MISRGLVPDVHIY-FVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDN 248
Query: 227 EMEAARKILEEAKKKHSVLTPV-IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEY 285
+ME A K+ E KKH VL + Y ++I GYCK +A L E+ + NV +
Sbjct: 249 KMEEAEKMF-ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 286 DKLIQSLCLKAMDWETAEKLHAELKENGL 314
L+ C KA + TA L + + G+
Sbjct: 308 GTLVDGFC-KARELVTARSLFVHMVKFGV 335
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 147/314 (46%), Gaps = 3/314 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N +V + KLG + A + K +P+ FTY I +R D A V
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M + L+ LC +++ EA ++ + +P + L+ L +
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG-S 336
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
E AL ++KE+ + + ++ +LC A++L+ +M+ G P +
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I GYCK G +E AV++++L+ESR L P+ TY + GY + A +L + +
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLE 455
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+ + V Y+SLI G C+ FD A +LL+ M + G+ + Y +I SLC K+ E
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC-KSKRVE 514
Query: 301 TAEKLHAELKENGL 314
A L L++ G+
Sbjct: 515 EACDLFDSLEQKGV 528
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 7/258 (2%)
Query: 39 YYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAI 98
Y + +L R D V +ML+ + P Y+ ++ CK ++EA+ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 99 ELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIP--GDRR-ELAKKRFPAVVRALCRV 155
E G P L+ Q + + A +V E+P G RR E+A + ++ LC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKD-LDSAFKVFNEMPLKGCRRNEVA---YTHLIHGLCVA 301
Query: 156 KDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTY 215
+ + A L ++M D P + +I C + +A+ ++K +E G++P+++TY
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 216 AVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKE 275
V+ + + E AR++L + +K + + Y++LI GYCK ++AV ++ M+
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 276 FGVRVNVDEYDKLIQSLC 293
+ N Y++LI+ C
Sbjct: 422 RKLSPNTRTYNELIKGYC 439
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 134/325 (41%), Gaps = 57/325 (17%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ S K + + A ++F+ E PN Y I+ + D A + +KML
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+P + L+ LC KLKEA + + +++G P + L+ +L ++ +
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF---- 618
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+ A RF +M++ G P + I
Sbjct: 619 ------------DHAYSRFQ--------------------QMLSSGTKPDAHTYTTFIQT 646
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK------K 240
YC+ G + A +MM + G+ PD++TY+ + GY + G+ A +L+ +
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Query: 241 KHSVLTPVIYHSLIRGYCK-------------MEQFDEAVKLLTEMKEFGVRVNVDEYDK 287
+H+ L+ +I H L Y K M +FD V+LL +M E V N Y+K
Sbjct: 707 QHTFLS-LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 288 LIQSLCLKAMDWETAEKLHAELKEN 312
LI +C + + AEK+ ++ N
Sbjct: 766 LILGIC-EVGNLRVAEKVFDHMQRN 789
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 127/274 (46%), Gaps = 2/274 (0%)
Query: 20 ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLV 79
A+++F K + +C P TY + I++L AL + ++M + P ++ L+
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRE 139
LC K ++A + +E G P + N L+ + + A++V++ + +
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG-MIEDAVDVVELMESRKLS 425
Query: 140 LAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEM 199
+ + +++ C+ +V A ++ +M+ P +N +I G C++G + A +
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 200 MKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCK 259
+ L+ RGL PD +TY + +E A + + ++K V+Y +LI GYCK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 260 MEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ DEA +L +M N ++ LI LC
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 14/246 (5%)
Query: 80 WLCKGKKLKEAHAVYKAA------IELGKYPPMPYINFLVAKLSQENETVPLALEVLKEI 133
W+ + + K H+VY A I G + I L+ K L++ +++
Sbjct: 112 WISQNPRYK--HSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKM 169
Query: 134 PGDRR-ELAKKR----FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYC 188
D R EL K + ++ +L R V KQ+ +EM+ D P +N ++ GYC
Sbjct: 170 NKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC 229
Query: 189 KAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPV 248
K G +E+A + + + GL PD +TY + GY ++++A K+ E K V
Sbjct: 230 KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 289
Query: 249 IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAE 308
Y LI G C + DEA+ L +MK+ V Y LI+SLC E A L E
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE-ALNLVKE 348
Query: 309 LKENGL 314
++E G+
Sbjct: 349 MEETGI 354
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 15/313 (4%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ S + AL + ++ E +PN TY + I++L + F+ A + +ML+
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+P + L+ CK +++A V + P N L+ + N V A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN--VHKA 446
Query: 127 LEVLKEIPGDRRELAKKRFPAVVR------ALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ VL ++ L +K P VV CR + +A +L+ M G P +
Sbjct: 447 MGVLNKM------LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+I CK+ +E+A ++ LE +G+ P+V Y + GY G+++ A +LE+
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
K+ + + +++LI G C + EA L +M + G++ V LI L LK D++
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL-LKDGDFD 619
Query: 301 TAEKLHAELKENG 313
A ++ +G
Sbjct: 620 HAYSRFQQMLSSG 632
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 6/290 (2%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N+L+ + K KA + V K + P+ TY I+ R FD A + M D
Sbjct: 432 NELIKGYCKSNVHKA-MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+P+ ++ ++ LCK K+++EA ++ + + G P + L+ + + V
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK-VD 549
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A +L+++ F A++ LC + A L +M+ G P + +I
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
K G+ + A + + S G +PD +TY Y G + A ++ AK + +
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM--AKMRENG 667
Query: 245 LTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
++P Y SLI+GY + Q + A +L M++ G + + LI+ L
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 140/342 (40%), Gaps = 35/342 (10%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + +K+ K + + E+ + N +TY + I RRS AL V KM+
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET---- 122
P+ ++ LL C G ++ +A ++ +E+G P N L+ L + N
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 123 ------------------------------VPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+ LAL +LK++ + E + ++ AL
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
C K+V A L EM G P +N +I C G A ++ + R + P+V
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
T++ + + G++ A K+ +E K+ Y SLI G+C ++ DEA +
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 273 MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
M NV Y+ LI+ C KA + +L E+ + GL
Sbjct: 387 MISKDCFPNVVTYNTLIKGFC-KAKRVDEGMELFREMSQRGL 427
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 159/397 (40%), Gaps = 75/397 (18%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
+ N L+ + + A+ + ++ V C+P+ TY + + L +R D AL + +K
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 62 M----------------------------------LDARSI-PEWYSVGDLLVWLCKGKK 86
M +D + I P + L+ LC +
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 87 LKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV---PLALEVLKE----------- 132
+A + IE P + + L+ +E + V L E++K
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 133 -IPG----DRRE---------LAKKRFPAVV------RALCRVKDVGTAKQLMLEMIADG 172
I G DR + ++K FP VV + C+ K V +L EM G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 173 PPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAAR 232
+ +I G+ +A E + A + K + S G+ PD+ TY+++ G N G++E A
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 233 KILEEAKKKHSVLTPVI--YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
+ E ++ S + P I Y+ +I G CK + ++ L + GV+ NV Y ++
Sbjct: 487 VVFEYLQR--SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 291 SLCLKAMDWETAEKLHAELKENG-LYLKGATRALIRA 326
C K + E A+ L E+KE G L G LIRA
Sbjct: 545 GFCRKGLK-EEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 52 FDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINF 111
D A+ + M+ +R P LL + K K ++ + LG + +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 112 LVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD 171
L+ + ++ + LAL VL ++ E +++ C + A L+ +M+
Sbjct: 122 LINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P + FN +I G + +AV ++ + +G +PD+ TY ++ +G G+++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+L++ ++ VIY+++I C + ++A+ L TEM G+R NV Y+ LI+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 292 LCLKAMDWETAEKLHAELKE 311
LC W A +L +++ E
Sbjct: 301 LCNYGR-WSDASRLLSDMIE 319
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 1/269 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ +F K GK A +++++ +P+ FTY I D A + + M+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ CK K++ E +++ + G L+ Q E
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+ V K++ D + ++ LC V TA + + P +N +I G
Sbjct: 452 I-VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
CKAG++E ++ L +G++P+V TY + SG+ G E A + E K++ +
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKE 275
Y++LIR + + + +L+ EM+
Sbjct: 571 SGTYNTLIRAHLRDGDKAASAELIREMRS 599
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 7/294 (2%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ + +K+ K + + + E+ + + +TY + I RRS AL V KM+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN--- 120
P+ ++ LL C K++ +A A+ +E+G P L+ L N
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
E V L ++++ G + +L + VV LC+ D+ A L+ +M ++
Sbjct: 206 EAVALVDQMVQR--GCQPDLVT--YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I G CK M+ A+ + ++++G+RPDV+TY+ + S N G A ++L + +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
+ V + +LI + K + EA KL EM + + ++ Y LI C+
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 148/326 (45%), Gaps = 13/326 (3%)
Query: 8 VFSFSKL-------GKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
VF++S L G+ A + + PN T+ I+A + A +
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M+ P+ ++ L+ C +L EA +++ I +P + + L+ +
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA- 411
Query: 121 ETVPLALEVLKEIPGDRRELAKKR--FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+ V +E+ +E+ +R L + ++ + +D A+ + +M++ G P
Sbjct: 412 KRVEEGMELFREMS--QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+N ++ G CK G++ +A+ + + L+ + PD+YTY ++ G G++E ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
K + Y+++I G+C+ +EA LL +MKE G N Y+ LI++ L+ D
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR-LRDGD 588
Query: 299 WETAEKLHAELKENGLYLKGATRALI 324
E + +L E++ G +T L+
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLV 614
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 2/259 (0%)
Query: 53 DWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFL 112
D A+ + M+ +R P LL + K K + ++ + LG + +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 113 VAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADG 172
+ + ++ + LAL VL ++ E +++ C K + A L+ +M+ G
Sbjct: 125 INCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 173 PPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAAR 232
P F +I G + +AV ++ + RG +PD+ TY + +G G+++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 233 KILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+L++ +K VIY+++I G CK + D+A+ L TEM G+R +V Y LI L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 293 CLKAMDWETAEKLHAELKE 311
C W A +L +++ E
Sbjct: 304 CNYGR-WSDASRLLSDMIE 321
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 23/335 (6%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ K AL +F + + P+ FTY I L + A + M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN-- 120
++ + P + L+ K KL EA +Y I+ P + + L+ +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVV------RALCRVKDVGTAKQLMLEMIADGPP 174
+ E++ ++K FP VV + C+ K V +L EM G
Sbjct: 380 DEAKHMFELM---------ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
+ +I G+ +A + + A + K + S G+ P++ TY ++ G G++ A +
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 235 LEEAKKKHSVLTPVI--YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
E ++ S + P I Y+ +I G CK + ++ +L + GV NV Y+ +I
Sbjct: 491 FEYLQR--STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 293 CLKAMDWETAEKLHAELKENG-LYLKGATRALIRA 326
C K E A+ L ++KE+G L G LIRA
Sbjct: 549 CRKG-SKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 135 GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEME 194
GD RE+ + R +++ V A L +M+ P P FN +++ K + E
Sbjct: 48 GDYREILRNRLSDIIK-------VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFE 100
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI 254
+ + + +++ G+ D+YTY++ + + ++ A +L + K V SL+
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL 160
Query: 255 RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
GYC ++ +AV L+ +M E G + + + LI L L
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 1/219 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ F K + + +E+F + N+ TY I ++ D A V ++M+
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + LL LCK KL +A V++ P + N ++ + + + V
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK-VEDG 522
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
E+ + + ++ CR A L+ +M DGP P + +N +I
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNG 225
+ G+ E + E++K + S G D T ++ + +G
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 142/314 (45%), Gaps = 5/314 (1%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N ++ KLG+ K A+EV ++ C PN+ TY I L + + + A + +
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+ +P+ + L+ LC + + A +++ G P N L+ L +
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 121 ETVPLALEVLK--EIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+ + AL +LK E+ G R + + ++ C+ A+++ EM G +
Sbjct: 450 K-LDEALNMLKQMELSGCARSVIT--YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+N +I G CK+ +E A ++M + G +PD YTY + + + GG+++ A I++
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
V Y +LI G CK + + A KLL ++ G+ + Y+ +IQ L K
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 299 WETAEKLHAELKEN 312
E L++N
Sbjct: 627 TEAINLFREMLEQN 640
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 138/300 (46%), Gaps = 3/300 (1%)
Query: 15 GKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSI-PEWYS 73
G AL + E+ F C ++ + + + + + AL Q+M + P+ Y+
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 74 VGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEI 133
L+ LCK +K A + ++ G P + N +++ L + E V A+EVL ++
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE-VKEAVEVLDQM 356
Query: 134 PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEM 193
+ ++ LC+ V A +L + + G P FN +I G C
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 194 EQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
A+E+ + + S+G PD +TY ++ + G+++ A +L++ + + + Y++L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
I G+CK + EA ++ EM+ GV N Y+ LI LC K+ E A +L ++ G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC-KSRRVEDAAQLMDQMIMEG 535
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 148/345 (42%), Gaps = 39/345 (11%)
Query: 6 DLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDA 65
+++ + G ++ E + +CE + T+ + IE+ + D L V M+D
Sbjct: 88 EILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDE 147
Query: 66 RSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+ P+ + +L L G LK + G P + N L+ L + ++ P
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 125 LALEVLKEIP---------------------GD-------RREL-------AKKRFPAVV 149
A+ +L+++P GD R ++ + +V
Sbjct: 208 -AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 150 RALCRVKDVGTAKQLMLEMI-ADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL 208
C+ V A + EM DG P FN ++ G CKAG ++ A+E+M ++ G
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVK 268
PDVYTY + SG GE++ A ++L++ + V Y++LI CK Q +EA +
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 269 LLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
L + G+ +V ++ LIQ LCL + A +L E++ G
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCL-TRNHRVAMELFEEMRSKG 430
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 149/318 (46%), Gaps = 3/318 (0%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ + + + + A+ + E + P+ T+ ++ D AL + ++M+
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEA-HAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+ SV ++ CK ++++A + + + + + G +P N LV L +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH- 310
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
V A+E++ + + + + +V+ LC++ +V A +++ +MI P +N
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I+ CK ++E+A E+ ++L S+G+ PDV T+ + G A ++ EE + K
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
Y+ LI C + DEA+ +L +M+ G +V Y+ LI C KA A
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC-KANKTREA 489
Query: 303 EKLHAELKENGLYLKGAT 320
E++ E++ +G+ T
Sbjct: 490 EEIFDEMEVHGVSRNSVT 507
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 123/276 (44%), Gaps = 3/276 (1%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ + A+E+FE+ CEP+ FTY + I++L + D AL + ++M
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+ + L+ CK K +EA ++ G N L+ L + + V
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK-SRRV 521
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
A +++ ++ + ++ K + +++ CR D+ A ++ M ++G P + +
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASG-YSNGGEMEAARKILEEAKKKH 242
I+G CKAG +E A ++++ ++ +G+ + Y + G + EA E ++
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 243 SVLTPVIYHSLIRGYCK-MEQFDEAVKLLTEMKEFG 277
+ V Y + RG C EAV L E+ E G
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 7/297 (2%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N L+ + +K+ K + + EK + N +TY + I RRS AL +
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
KM+ P ++ LL C GK++ +A A+ +E+G P L+ L N
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 121 ---ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
E V L +++ G + L + VV LC+ D+ A L+ +M A
Sbjct: 130 KASEAVALVDRMVQR--GCQPNLVT--YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
+FN +I CK ++ A+ + K +E++G+RP+V TY+ + S + G A ++L +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
+K V +++LI + K +F EA KL +M + + ++ Y+ LI C+
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 143/331 (43%), Gaps = 15/331 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ S K AL +F++ E PN TY I L + A + M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
++ + P + L+ K K EA ++ I+ P + N L+ +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR- 305
Query: 123 VPLALEVLKEIPGDRRELAKKRFP------AVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
L+ K++ ++K FP +++ C+ K V +L EM G
Sbjct: 306 ----LDKAKQMF--EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+ +I G G+ + A ++ K + S G+ PD+ TY+++ G N G++E A ++ +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+K L IY ++I G CK + D+ L + GV+ NV Y+ +I LC K
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 479
Query: 297 MDWETAEKLHAELKENG-LYLKGATRALIRA 326
+ + A L ++KE+G L G LIRA
Sbjct: 480 L-LQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 2/250 (0%)
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M+ +R +P + LL + K KK ++ + LG + N L+ + ++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
+ LAL +L ++ E + +++ C K + A L+ +M+ G P F
Sbjct: 61 -ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I G + +AV ++ + RG +P++ TY V+ +G G+++ A +L + +
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
VI++++I CK D+A+ L EM+ G+R NV Y LI LC W
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR-WSD 238
Query: 302 AEKLHAELKE 311
A +L +++ E
Sbjct: 239 ASQLLSDMIE 248
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 117/278 (42%), Gaps = 36/278 (12%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
PN T+ I+A + F A + M+ P+ ++ L+ C +L +A
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+++ + +P + N L+ + ++ V E+ +E+ + +++ L
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCK-SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 153 CRVKDVGTAKQLMLEMIADGPPP-------------GNA-------VFNFV--------- 183
D A+++ +M++DG PP N VF+++
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 184 ------ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
I G CKAG+++ ++ L +G++P+V TY + SG + ++ A +L++
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKE 275
K+ + Y++LIR + + + +L+ EM+
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 95/239 (39%), Gaps = 1/239 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N L+ F + A ++FE C P+ TY I+ + + + +
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M + + + L+ L A V+K + G P + + L+ L N
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN-N 408
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ ALEV + +L + ++ +C+ V L + G P +
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
N +I+G C +++A ++K ++ G PD TY + + G+ A+ +++ E +
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 1/288 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + +K+ K + + E+ + N +TY + I RRS AL V KM+
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P ++ LL C K++ EA A+ G P N L+ L N+ A
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE-A 205
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+ ++ + + + VV LC+ D A L+ +M PG ++N +I G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
CK M+ A+ + K +E++G+RP+V TY+ + S N G A ++L + ++
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
+ +LI + K + EA KL EM + + ++ Y LI C+
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 142/331 (42%), Gaps = 15/331 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ K AL +F++ E PN TY I L + A + M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
++ + P+ ++ L+ K KL EA +Y ++ P + + L+ +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR- 376
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVV------RALCRVKDVGTAKQLMLEMIADGPPPG 176
L+ K++ ++K FP VV + C+ K V ++ EM G
Sbjct: 377 ----LDEAKQMF--EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+N +I G +AG+ + A E+ K + S G+ P++ TY + G G++E A + E
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
++ T Y+ +I G CK + ++ L + GV+ +V Y+ +I C K
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 297 MDWETAEKLHAELKENG-LYLKGATRALIRA 326
E A+ L E+KE+G L G LIRA
Sbjct: 551 -SKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 8/263 (3%)
Query: 52 FDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINF 111
D A+ + +M+ +R P LL + K K ++ + LG P Y
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG-IPHNHYTYS 120
Query: 112 LVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD 171
++ +PLAL VL ++ E +++ C K + A L+ +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P FN +I G + +A+ ++ + ++G +PD+ TY V+ +G G+ + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 232 RKIL---EEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
+L E+ K + VL IY+++I G CK + D+A+ L EM+ G+R NV Y L
Sbjct: 241 FNLLNKMEQGKLEPGVL---IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 289 IQSLCLKAMDWETAEKLHAELKE 311
I LC W A +L +++ E
Sbjct: 298 ISCLC-NYGRWSDASRLLSDMIE 319
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 1/277 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ + L+ +F K GK A +++++ +P+ TY I D A + +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
M+ P+ + L+ CK K+++E V++ + G N L+ L Q
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ +A E+ KE+ D + ++ LC+ + A + + P +
Sbjct: 446 D-CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I G CKAG++E ++ L +G++PDV Y + SG+ G E A + +E K+
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
++ Y++LIR + + + +L+ EM+ G
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 3/222 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F K + + +EVF + N+ TY + I+ L++ D A + ++M+
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYI-NFLVAKLSQENETV 123
P + LL LCK KL++A V++ ++ K P Y N ++ + + + V
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGK-V 517
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
++ + + + ++ CR A L EM DG P + +N +
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNG 225
I + G+ E + E++K + S G D T ++ + +G
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 10/286 (3%)
Query: 11 FSKLGKGKA---ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARS 67
SK+ K K + +F EV + ++Y + I L R S F AL V KM+
Sbjct: 76 LSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGY 135
Query: 68 IPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLV---AKLSQENETVP 124
P+ +V L+ C+G ++ +A + E+G P + N ++ K+ N+
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND--- 192
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A+E+ + D + ++V LC A +LM +M+ P F VI
Sbjct: 193 -AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
+ K G+ +A+++ + + R + PDV+TY + +G G ++ A+++L+ K +
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
V Y++LI G+CK ++ DE KL EM + G+ + Y+ +IQ
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 17/318 (5%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ K+G A+E+F++ E ++ TY + L + A + + M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+ +P + ++ K K EA +Y+ P + N L+ L
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR- 294
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVV------RALCRVKDVGTAKQLMLEMIADGPPPG 176
V A ++L + + K P VV C+ K V +L EM G
Sbjct: 295 VDEAKQMLDLM------VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+N +I GY +AG + A E+ ++SR P++ TY+++ G +E A + E
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+K L Y+ +I G CK+ ++A L + G++ +V Y +I C K
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR 465
Query: 297 MDWETAEKLHAELKENGL 314
W+ ++ L+ +++E+GL
Sbjct: 466 -QWDKSDLLYRKMQEDGL 482
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 1/236 (0%)
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
KM+ +R +P +L + K K +++ G + N ++ L + +
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
V +AL V+ ++ E +++ C+ V A L+ +M G P ++
Sbjct: 119 RFV-IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 177
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I G CK G + AVE+ +E G+R D TY + +G G A +++ +
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+ V + + ++I + K +F EA+KL EM V +V Y+ LI LC+
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%)
Query: 163 QLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGY 222
L +MI P P F+ V++ K+ + + + +E G+ D+Y+Y ++ +
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 223 SNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNV 282
A ++ + K V SLI G+C+ + +A+ L+++M+E G R +V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 283 DEYDKLIQSLC 293
Y+ +I C
Sbjct: 175 VIYNTIIDGSC 185
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 154/327 (47%), Gaps = 3/327 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ + ++ S + G AA+ +F++ E + + TY + L + ++ + +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
M+ +P + LL K KL+EA+ +YK I G P + N L+ +N
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ A +L + ++ F ++++ C VK V ++ + G +
Sbjct: 348 R-LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+ ++ G+C++G+++ A E+ + + S G+ PDV TY ++ G + G++E A +I E+ +K
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
L V+Y ++I G CK + ++A L + GV+ NV Y +I LC K
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG-SLS 525
Query: 301 TAEKLHAELKENGLYLKGAT-RALIRA 326
A L +++E+G T LIRA
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 131/300 (43%), Gaps = 37/300 (12%)
Query: 15 GKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSV 74
GK A+ + ++ C+P+ TY + + R AL + +KM + + ++
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 75 GDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIP 134
++ LC+ + A +++K E ET + V+
Sbjct: 232 STIIDSLCRDGCIDAAISLFK-----------------------EMETKGIKSSVVT--- 265
Query: 135 GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEME 194
+ ++VR LC+ L+ +M++ P FN ++ + K G+++
Sbjct: 266 ----------YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI 254
+A E+ K + +RG+ P++ TY + GY + A +L+ + V + SLI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 255 RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+GYC +++ D+ +K+ + + G+ N Y L+Q C ++ + AE+L E+ +G+
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QSGKIKLAEELFQEMVSHGV 434
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 16 KGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVG 75
K A+ +F++ + P+ + A+ R F+ L C+++ Y++
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 76 DLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPG 135
++ C+ K A++V ++LG P N L+ L E +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK-------------- 173
Query: 136 DRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQ 195
V A L+ M+ +G P +N ++ G C++G+
Sbjct: 174 ----------------------VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
A+++++ +E R ++ DV+TY+ I G ++AA + +E + K + V Y+SL+R
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
G CK ++++ LL +M + NV ++ L+ +K + A +L+ E+ G+
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF-VKEGKLQEANELYKEMITRGI 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 127/294 (43%), Gaps = 2/294 (0%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ F K GK + A E++++ PN TY ++ ++ A + M+
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+ P+ + L+ C K++ + V++ + G + LV Q + +
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK-I 419
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
LA E+ +E+ + ++ LC + A ++ ++ G ++ +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I G CK G++E A + L +G++P+V TY V+ SG G + A +L + ++ +
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
Y++LIR + + + KL+ EMK G + K++ + L AM
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI-KMVIDMLLSAM 592
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 4/289 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRR--SAFDWALPVCQKMLD 64
+V K KAA ++ + ++ C S L+I Y R FD +L V KM D
Sbjct: 57 MVLRLVSANKFKAAEDLIVRMKIENCVV-SEDILLSICRGYGRVHRPFD-SLRVFHKMKD 114
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P + +L L + +L A YK E+G P + +N L+ L + + TV
Sbjct: 115 FDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVD 174
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
L++ E+P + + ++ LCR + AK+L EM+ P + +I
Sbjct: 175 AGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G C + +++A+ ++ ++S+G+ P+V+TY+ + G G A ++ E +
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 294
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
V Y +LI G CK ++ EAV+LL M G++ + Y K+I C
Sbjct: 295 PNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 157/366 (42%), Gaps = 47/366 (12%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPN-------------------SFTYY--- 40
IL + + ++ + +L VF K + F C+P+ +F +Y
Sbjct: 88 ILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNM 147
Query: 41 -------------LTIEALYRRSA-FDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKK 86
+ I+AL R D L + +M P+ Y+ G L+ LC+ +
Sbjct: 148 REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGR 207
Query: 87 LKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFP 146
+ EA ++ +E P + L+ L ++ V A+ L+E+ E +
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG-SKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
+++ LC+ A +L M+A G P + +ITG CK ++++AVE++ + +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEE---AKKKHSVLTPVIY----HSLIRGYCK 259
GL+PD Y + SG+ + A L+E + LT I+ + ++RG C
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA 386
Query: 260 MEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG-LYLKG 318
A L M+ G+ V V+ + L++ LC K +++ A +L E+ +G + KG
Sbjct: 387 -NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKG-EFQKAVQLVDEIVTDGCIPSKG 444
Query: 319 ATRALI 324
+ LI
Sbjct: 445 TWKLLI 450
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 95/243 (39%), Gaps = 9/243 (3%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
Y L+ + G+ A ++F + C P TY I L D A+ ++
Sbjct: 193 YTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEE 252
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M P ++ L+ LCK + +A +++ + G P M L+ L +E +
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE-Q 311
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
+ A+E+L + + + V+ C + A + EMI G P +N
Sbjct: 312 KIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN 371
Query: 182 F-------VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
V+ G C A +A + + SRG+ +V T + GE + A ++
Sbjct: 372 IHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQL 430
Query: 235 LEE 237
++E
Sbjct: 431 VDE 433
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 136/294 (46%), Gaps = 7/294 (2%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ + +K+ K + + EK + + +TY + I RRS AL + KM+
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN--- 120
P ++ LL C GK++ +A A+ +E+G P L+ L N
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
E V L +++ G + L + VV LC+ D A L+ +M A +F
Sbjct: 208 EAVALVDRMVQR--GCQPNLVT--YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I CK ++ A+ + K +E++G+RP+V TY+ + S + G A ++L + +
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
K V +++LI + K +F EA KL +M + + ++ Y+ L+ C+
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 143/331 (43%), Gaps = 15/331 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ S K AL +F++ E PN TY I L + A + M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
++ + P + L+ K K EA +Y I+ P + N LV +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR- 380
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVV------RALCRVKDVGTAKQLMLEMIADGPPPG 176
L+ K++ ++K FP VV + C+ K V +L EM G
Sbjct: 381 ----LDKAKQMF--EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+ +I G G+ + A ++ K + S G+ PD+ TY+++ G N G++E A ++ +
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+K L IY ++I G CK + D+ L + GV+ NV Y+ +I LC K
Sbjct: 495 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Query: 297 MDWETAEKLHAELKENG-LYLKGATRALIRA 326
+ + A L ++KE+G L G LIRA
Sbjct: 555 L-LQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 2/260 (0%)
Query: 52 FDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINF 111
D A+ + M+ +R +P LL + K KK ++ + L + N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 112 LVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD 171
L+ + ++ + LAL +L ++ E + +++ C K + A L+ +M+
Sbjct: 126 LINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P F +I G + +AV ++ + RG +P++ TY V+ +G G+ + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+L + + VI++++I CK D+A+ L EM+ G+R NV Y LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 292 LCLKAMDWETAEKLHAELKE 311
LC W A +L +++ E
Sbjct: 305 LCSYGR-WSDASQLLSDMIE 323
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 117/272 (43%), Gaps = 1/272 (0%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ +F K GK A ++++ +P+ FTY + D A + + M+
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
P+ + L+ CK K++++ +++ G L+ L + +
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD-C 451
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
A +V K++ D + ++ LC + A ++ M ++ +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I G CKAG+++ ++ L +G++P+V TY + SG + ++ A +L++ K+
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKE 275
+ Y++LIR + + + +L+ EM+
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 95/239 (39%), Gaps = 1/239 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N LV F + A ++FE C P+ TY I+ + + + +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M + + + L+ L A V+K + G P + + L+ L N
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN-N 483
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ ALEV + +L + ++ +C+ V L + G P +
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
N +I+G C +++A ++K ++ G P+ TY + + G+ A+ +++ E +
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 7/294 (2%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ + +K+ K + + + E+ + + +TY + I RRS AL V KM+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN--- 120
P+ ++ LL C K++ +A A+ +E+G P L+ L N
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
E V L ++++ G + +L + VV LC+ D+ A L+ +M A +F
Sbjct: 206 EAVALVDQMVQR--GCQPDLVT--YGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I CK +E AV++ +E++G+RP+V TY + + N G A ++L +
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
K V +++LI + K + EA KL EM + + + Y+ LI C+
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 142/325 (43%), Gaps = 6/325 (1%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ S K + A+++F + E PN TY I L + A + M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
L+ + P + L+ K KL EA +++ I+ P N L+ N
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR- 378
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A ++ K + + + ++ C+ K V +L EM G +
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I G+ +AG+ + A + K + S + D+ TY+++ G + G+++ A I + +K
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
L IY+++I G CK + EA L + ++ +V Y+ +I LC K + + A
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRL-LQEA 554
Query: 303 EKLHAELKENG-LYLKGATRALIRA 326
+ L ++KE+G L G LIRA
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 2/259 (0%)
Query: 53 DWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFL 112
D A+ + M+ +R P LL + K K + ++ + LG + +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 113 VAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADG 172
+ + ++ + LAL VL ++ E +++ C K + A L+ +M+ G
Sbjct: 125 INCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 173 PPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAAR 232
P F +I G + +AV ++ + RG +PD+ TY + +G G+++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 233 KILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+L + + VI++++I CK + AV L TEM+ G+R NV Y+ LI L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 293 CLKAMDWETAEKLHAELKE 311
C W A +L + + E
Sbjct: 304 C-NYGRWSDASRLLSNMLE 321
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 123/287 (42%), Gaps = 1/287 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
+V K G AL + K E + + N + I++L + + A+ + +M
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ LC + +A + +E P + N L+ +E + V A
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE-A 347
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++ +E+ + + ++ C + AKQ+ M++ P +N +I G
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+CK +E VE+ + + RGL + TY I G+ G+ ++A+ + ++
Sbjct: 408 FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ Y L+ G C + D A+ + +++ + +N+ Y+ +I+ +C
Sbjct: 468 IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 134 PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEM 193
GD RE+ + R +++ V A L +M+ P P FN +++ K +
Sbjct: 47 SGDYREILRNRLSDIIK-------VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 194 EQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
E + + + +++ G+ D+YTY++ + + ++ A +L + K V SL
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
+ GYC ++ +AV L+ +M E G + + + LI L L
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 118/274 (43%), Gaps = 4/274 (1%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ +F K GK A ++ E+ +P++ TY L I + D A + + M+
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+P + L+ CK K++++ +++ + G ++ Q +
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD-C 449
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
A V K++ +R + ++ LC + TA + + ++N +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I G CKAG++ +A + L S ++PDV TY + SG + ++ A + + K+ +
Sbjct: 510 IEGMCKAGKVGEAWD---LFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
+ Y++LIR + + +L+ EM+ G
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 11/325 (3%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ K G A +F + E+ + + Y I +D + + M+ +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE----T 122
P+ + L+ K KL+EA ++K I+ G P L+ +EN+
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
L L V K + R F ++ C+ + +L +M G +N
Sbjct: 373 HMLDLMVSKGCGPNIRT-----FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I G+C+ G++E A E+ + + SR +RPD+ +Y ++ G + GE E A +I E+ +K
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
L IY+ +I G C + D+A L + GV+ +V Y+ +I LC K A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG-SLSEA 546
Query: 303 EKLHAELKENGLYLKGAT-RALIRA 326
+ L +++E+G G T LIRA
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 130/293 (44%), Gaps = 1/293 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y L+ ++ + K A K EP++ T+ I L AL +
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M++ P ++ L+ LC K+ +A + +E G + P V K+ ++
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYGPVLKVMCKS 225
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
LA+E+L+++ + +L ++ ++ LC+ + A L EM G ++
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+I G+C AG + ++++ + R + PDV ++ + + G++ A ++ +E +
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ V Y SLI G+CK Q D+A +L M G N+ ++ LI C
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 121/295 (41%), Gaps = 37/295 (12%)
Query: 20 ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLV 79
L++ ++ E+ N +T + I R A K++ P+ + L+
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRE 139
LC ++ EA + +E+G P + +N
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLN----------------------------- 181
Query: 140 LAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEM 199
A+V LC V A L+ M+ G P + V+ CK+G+ A+E+
Sbjct: 182 -------ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 200 MKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCK 259
++ +E R ++ D Y++I G G ++ A + E + K +IY +LIRG+C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 260 MEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
++D+ KLL +M + + +V + LI +K AE+LH E+ + G+
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF-VKEGKLREAEELHKEMIQRGI 348
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 1/209 (0%)
Query: 32 CEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAH 91
C PN T+ + I + + D L + +KM + + + L+ C+ KL+ A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 92 AVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
+++ + P + L+ L E ALE+ ++I + EL + ++
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK-ALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
+C V A L + G P +N +I G CK G + +A + + +E G P+
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKK 240
TY ++ + G+ + K++EE K+
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 114/275 (41%), Gaps = 1/275 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ F K GK + A E+ ++ P++ TY I+ + + D A + M+
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ CK + + +++ G N L+ + + + +A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-LEVA 441
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
E+ +E+ R + ++ LC + A ++ ++ ++N +I G
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
C A +++ A ++ L +G++PDV TY ++ G G + A + + ++
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
Y+ LIR + ++ KL+ E+K G V+
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 95/228 (41%), Gaps = 13/228 (5%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ + K LE+F K + ++ TY I+ + A + Q+M+
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVY------KAAIELGKYPPMPYINFLVAKLS 117
R P+ S LL LC + ++A ++ K +++G Y N ++ +
Sbjct: 450 SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY------NIIIHGMC 503
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
++ V A ++ +P + K + ++ LC+ + A L +M DG P
Sbjct: 504 NASK-VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNG 225
+N +I + G+ ++ ++++ ++ G D T ++ S+G
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 140/345 (40%), Gaps = 35/345 (10%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ + +K+ K + + E+ + + + ++Y + I RRS AL V KM+
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET- 122
P+ ++ LL C GK++ EA A+ + P N L+ L N+
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 123 ---------------------------------VPLALEVLKEIPGDRRELAKKRFPAVV 149
+ LAL +LK++ + E + ++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 150 RALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLR 209
ALC K+V A L EM G P +N +I C G A ++ + R +
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 210 PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
P+V T++ + + G++ A K+ +E K+ Y SLI G+C ++ DEA +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 270 LTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
M NV Y+ LI+ C KA E +L E+ + GL
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFC-KAKRVEEGMELFREMSQRGL 426
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 52 FDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINF 111
D A+ + +M+ +R +P LL + K K ++ + L + N
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 112 LVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD 171
L+ + ++ +PLAL VL ++ E +++ C K + A L+ +M
Sbjct: 121 LINCFCRRSQ-LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
P FN +I G + +AV ++ + +RG +PD++TY + +G G+++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+L++ +K VIY ++I C + ++A+ L TEM G+R NV Y+ LI+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 292 LCLKAMDWETAEKLHAELKE 311
LC W A +L +++ E
Sbjct: 300 LC-NYGRWSDASRLLSDMIE 318
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 158/395 (40%), Gaps = 75/395 (18%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM- 62
N L+ K A+ + ++ C+P+ FTY + L +R D AL + +KM
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 63 ---------------------------------LDARSI-PEWYSVGDLLVWLCKGKKLK 88
+D + I P + L+ LC +
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 89 EAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV---PLALEVLKE------------I 133
+A + IE P + + L+ +E + V L E++K I
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 134 PG----DRRE---------LAKKRFPAVV------RALCRVKDVGTAKQLMLEMIADGPP 174
G DR + ++K FP VV + C+ K V +L EM G
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
+N +I G +AG+ + A ++ K + S G+ PD+ TY+++ G G++E A +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 235 LEEAKKKHSVLTPVI--YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
E +K S + P I Y+ +I G CK + ++ L + GV+ NV Y +I
Sbjct: 488 FEYLQK--SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 293 CLKAMDWETAEKLHAELKENG-LYLKGATRALIRA 326
C K + E A+ L E+KE+G L G LIRA
Sbjct: 546 CRKGLK-EEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 1/271 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ +F K GK A +++++ +P+ FTY I D A + + M+
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ CK K+++E +++ + G N L+ L Q + +A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD-CDMA 449
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++ K++ D + ++ LC+ + A + + P +N +I G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
CKAG++E ++ L +G++P+V Y + SG+ G E A + E K+ ++
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
Y++LIR + + +L+ EM+ G
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 1/221 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F K + + +E+F + N+ TY I+ L++ D A + +KM+
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P+ + LL LCK KL++A V++ + P + N ++ + + + V
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK-VE 517
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
++ + + + ++ CR A L EM DG P + +N +I
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNG 225
+ G+ + E++K + S G D T +++ + +G
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 133/290 (45%), Gaps = 2/290 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N L+ SK + A + +PN+FTY I S F A +
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M + +P L+ CK K+ EA + Y++ ++ G L+ L + N
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK-N 605
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ V A E+ +E+ G + ++ ++ ++ A + EM+ +G P ++
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N ++ G+C++GE+E+A E++ + +GL P+ TY I GY G++ A ++ +E K
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
K V +Y +L+ G C++ + A+ + K+ G + ++ LI
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALIN 774
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 130/326 (39%), Gaps = 34/326 (10%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
Y +V G A + ++ C PN Y I+ + S F A+ V ++
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYP-PMPYINFLVAKLSQE- 119
M + P+ + L++ L K K++ EA + +E G P Y F+ +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 120 ------------------NETVPLAL--------EVLKEIPGDRRELAK------KRFPA 147
N+ + L +V++ R + + K +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
++ L + V A+++ EM G P + +I G+ K G M++A + + G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
L P+V Y ++ G+ GE+E A+++L+E K V Y ++I GYCK EA
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLC 293
+L EMK G+ + Y L+ C
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCC 743
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 32/277 (11%)
Query: 53 DWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFL 112
D AL + + M+ +P Y+ L+ LCK K+L++A ++ LG
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG----------- 307
Query: 113 VAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVR------------ALCRVKDVGT 160
+S +N T L ++ L + G + AK +V +C + G
Sbjct: 308 ---VSLDNHTYSLLIDGL--LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 161 ---AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAV 217
AK L MIA G P + +I GYC+ + Q E++ ++ R + YTY
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 218 IASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
+ G + G+++ A I++E VIY +LI+ + + +F +A+++L EMKE G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 278 VRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+ ++ Y+ LI L KA + A E+ ENGL
Sbjct: 483 IAPDIFCYNSLIIGLS-KAKRMDEARSFLVEMVENGL 518
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 125/295 (42%), Gaps = 1/295 (0%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
Y + L+ K+ + + A + + + ++ TY L I+ L + D A + +
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M+ + Y + + K +++A A++ I G P L+ +E +
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCRE-K 396
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
V E+L E+ ++ + VV+ +C D+ A ++ EMIA G P ++
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I + + A+ ++K ++ +G+ PD++ Y + G S M+ AR L E +
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
Y + I GY + +F A K + EM+E GV N LI C K
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 126/317 (39%), Gaps = 30/317 (9%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ FSKLG + A +F++ PN Y + + R + A +++LD
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA----KELLDEM 688
Query: 67 SI----PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
S+ P + ++ CK L EA ++ G P LV + N+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND- 747
Query: 123 VPLALEVLKEIPGDRRELAKKR--FPAVVRALCRVKDVGTAKQLMLEMIADGP-----PP 175
V A+ + +++ A F A++ + + K +L + DG P
Sbjct: 748 VERAITIFGT---NKKGCASSTAPFNALINWVFKFGKT-ELKTEVLNRLMDGSFDRFGKP 803
Query: 176 GNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKIL 235
+ +N +I CK G +E A E+ +++ L P V TY + +GY G +
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 236 EEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC-- 293
+EA ++Y +I + K +A+ L+ +M + VD+ KL S C
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF---AKNAVDDGCKLSISTCRA 920
Query: 294 -----LKAMDWETAEKL 305
K + E AEK+
Sbjct: 921 LLSGFAKVGEMEVAEKV 937
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 157 DVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYA 216
+V A +L MI G P ++ +I G CK +E A ++ ++S G+ D +TY+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 217 VIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH------------------------- 251
++ G G +AA+ ++ E + P +Y
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 252 ----------SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
SLI GYC+ + + +LL EMK+ + ++ Y +++ +C + D +
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC-SSGDLDG 435
Query: 302 AEKLHAELKENG 313
A + E+ +G
Sbjct: 436 AYNIVKEMIASG 447
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 37/313 (11%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y+ N L+ F K G A +VF++ +P ++ I + D +
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M +R+ P+ ++ L+ LCK K+ AH ++ + G P N
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP---------------N 344
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ + F ++ R ++ K+ +M++ G P ++
Sbjct: 345 DVI---------------------FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLY 383
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N ++ G+CK G++ A ++ + RGLRPD TY + G+ GG++E A +I +E +
Sbjct: 384 NTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ 443
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
L V + +L+ G CK + +A + L EM G++ + Y ++ + C K D +
Sbjct: 444 NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG-DAQ 502
Query: 301 TAEKLHAELKENG 313
T KL E++ +G
Sbjct: 503 TGFKLLKEMQSDG 515
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 133/289 (46%), Gaps = 20/289 (6%)
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLV---AKLS 117
++LDA Y L+ CK + +A V+ + P + N L+ K+
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
+E L ++ K R + A++ ALC+ + A L EM G P +
Sbjct: 290 NLDEGFRLKHQMEKS----RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
+F +I G+ + GE++ E + + S+GL+PD+ Y + +G+ G++ AAR I++
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL--K 295
++ + Y +LI G+C+ + A+++ EM + G+ ++ + L+ +C +
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 296 AMDWETA--EKLHAELKENGLYL---------KGATRALIRAVKEMENE 333
+D E A E L A +K + + KG + + +KEM+++
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 4/286 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + K K A +F++ PN + I R D QKML
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ L+ CK L A + I G P L+ + + V A
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD-VETA 434
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
LE+ KE+ + EL + F A+V +C+ V A++ + EM+ G P + + ++
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+CK G+ + +++K ++S G P V TY V+ +G G+M+ A +L+ V
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ Y++L+ G+ + + K + E G+ ++ Y ++ L
Sbjct: 555 DITYNTLLEGH---HRHANSSKRYIQKPEIGIVADLASYKSIVNEL 597
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 21/272 (7%)
Query: 22 EVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWL 81
+F F+ +P + T+E + + F L V + +A+S+ E LV
Sbjct: 100 SIFAFFKFISSQPG---FRFTVETYFVLARF---LAVHEMFTEAQSLIE-------LVVS 146
Query: 82 CKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS---QENETVPLALEVLKEIPGDRR 138
KGK A +V+ + +E+ + PM FLV L + +P A++ + R
Sbjct: 147 RKGKN--SASSVFISLVEM-RVTPM--CGFLVDALMITYTDLGFIPDAIQCFRLSRKHRF 201
Query: 139 ELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVE 198
++ + ++ + ++ GT +E++ G P VFN ++ +CK G + A +
Sbjct: 202 DVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQK 261
Query: 199 MMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYC 258
+ + R L+P V ++ + +GY G ++ ++ + +K + Y +LI C
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 259 KMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
K + D A L EM + G+ N + LI
Sbjct: 322 KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 154/343 (44%), Gaps = 34/343 (9%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I L+ S SK + AL++ E+ + C P++ T+ I L + + A + +M
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 63 LDARSIPEWYSVGDLLVWLCK-GK------------------------------KLKEAH 91
L P+ + G L+ LCK G+ +L +A
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 92 AVYKAAI-ELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVR 150
AV + G P + N L+ +E V LALEVL ++ + + +V
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEG-LVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 151 ALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRP 210
C++ + A ++ EM ADG P FN +I+ +CK + +AVE+ + + +G +P
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 211 DVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLL 270
DVYT+ + SG E++ A +L + + V V Y++LI + + + EA KL+
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 271 TEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
EM G ++ Y+ LI+ LC +A + + A L ++ +G
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLC-RAGEVDKARSLFEKMLRDG 594
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 7/315 (2%)
Query: 3 ILNDLVFSF---SKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVC 59
I N L+ F +L KA L + + P+ TY I ++ AL V
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLS--DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 60 QKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
M + P YS L+ CK K+ EA+ V G P N L++ +E
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ +P A+E+ +E+P + F +++ LC V ++ A L+ +MI++G
Sbjct: 473 HR-IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N +I + + GE+++A +++ + +G D TY + G GE++ AR + E+
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+ + + + LI G C+ +EAV+ EM G ++ ++ LI LC +A
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC-RAGRI 650
Query: 300 ETAEKLHAELKENGL 314
E + +L+ G+
Sbjct: 651 EDGLTMFRKLQAEGI 665
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 1/286 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
LV F KLGK A V + +PN+ + I A + A+ + ++M
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ Y+ L+ LC+ ++K A + + I G N L+ + E + A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE-IKEA 548
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+++ E+ L + + ++++ LCR +V A+ L +M+ DG P N N +I G
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
C++G +E+AVE K + RG PD+ T+ + +G G +E + + + +
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
V +++L+ CK +A LL E E G N + L+QS+
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 10 SFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIP 69
+F + + +AL + C PNS Y I +L + + + AL + ++M +P
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 70 EWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEV 129
+ + D+++ LCK ++ EA + + G P +L+ L + V A ++
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR-VDAAKDL 344
Query: 130 LKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD-GPPPGNAVFNFVITGYC 188
IP + E+ F ++ + AK ++ +M+ G P +N +I GY
Sbjct: 345 FYRIP--KPEIVI--FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 189 KAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPV 248
K G + A+E++ + ++G +P+VY+Y ++ G+ G+++ A +L E V
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 249 IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
++ LI +CK + EAV++ EM G + +V ++ LI LC
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 135/289 (46%), Gaps = 1/289 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L++ + K G ALEV C+PN ++Y + ++ + D A V +M
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P L+ CK ++ EA +++ G P + N L++ L + +E +
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE-IK 511
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
AL +L+++ + + ++ A R ++ A++L+ EM+ G P +N +I
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G C+AGE+++A + + + G P + ++ +G G +E A + +E + S
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
V ++SLI G C+ + ++ + + +++ G+ + ++ L+ LC
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 33/309 (10%)
Query: 17 GKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGD 76
G+ + E V+ CEP +Y + +E L + A V ML + P ++ G
Sbjct: 163 GQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGV 222
Query: 77 LLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGD 136
++ C ++ A ++ + + G P L+ LS+ N V AL++L+E+
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR-VNEALQLLEEMFLM 281
Query: 137 RRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQA 196
+ F V+ LC+ + A +++ M+ G P + + +++ G CK G ++ A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 197 VEMM--------------------------------KLLESRGLRPDVYTYAVIASGYSN 224
++ ++ S G+ PDV TY + GY
Sbjct: 342 KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 225 GGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDE 284
G + A ++L + + K Y L+ G+CK+ + DEA +L EM G++ N
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 285 YDKLIQSLC 293
++ LI + C
Sbjct: 462 FNCLISAFC 470
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 131/293 (44%), Gaps = 1/293 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y L+ ++ F + K A K EPN+ T+ I L AL +
Sbjct: 123 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M++ P+ ++ L+ LC K EA + +E G P ++ + +
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+T LA+E+L+++ +L ++ ++ LC+ + A L EM G +
Sbjct: 243 QT-ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I G+C AG + ++++ + R + P+V T++V+ + G++ A ++ +E
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ + Y SLI G+CK D+A +++ M G N+ ++ LI C
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 140/321 (43%), Gaps = 3/321 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ K G A +F + E+ N TY + I +D + + M+ +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ K KL+EA ++K I G P L+ +EN + A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH-LDKA 387
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+++ + + + F ++ C+ + +L +M G +N +I G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+C+ G++ A E+ + + SR + P++ TY ++ G + GE E A +I E+ +K L
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
IY+ +I G C + D+A L + GV+ V Y+ +I LC K AE L
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-PLSEAELLF 566
Query: 307 AELKENGLYLKGAT-RALIRA 326
+++E+G G T LIRA
Sbjct: 567 RKMEEDGHAPDGWTYNILIRA 587
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 32 CEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAH 91
C+PN T+ + I + + D L + +KM + + + L+ C+ KL A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 92 AVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
+++ + P + L+ L E+ ALE+ ++I + EL + ++
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK-ALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
+C V A L + G PG +N +I G CK G + +A + + +E G PD
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKK 240
+TY ++ + G+ + K++EE K+
Sbjct: 578 GWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/323 (18%), Positives = 123/323 (38%), Gaps = 36/323 (11%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F G+ ++ + PN T+ + I++ + A + ++M+
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P+ + L+ CK L +A+ + + G P + N L+ + N +
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR-ID 420
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN------- 177
LE+ +++ + +++ C + + AK+L EM++ PP
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 178 ----------------------------AVFNFVITGYCKAGEMEQAVEMMKLLESRGLR 209
++N +I G C A +++ A ++ L +G++
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 210 PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
P V TY ++ G G + A + + ++ Y+ LIR + ++VKL
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 270 LTEMKEFGVRVNVDEYDKLIQSL 292
+ E+K G V+ +I L
Sbjct: 601 IEELKRCGFSVDASTIKMVIDML 623
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 97/228 (42%), Gaps = 13/228 (5%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ + K + LE+F K + ++ TY I+ + A + Q+M+
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVY------KAAIELGKYPPMPYINFLVAKLS 117
+ P + LL LC + ++A ++ K +++G Y N ++ +
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY------NIIIHGMC 519
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
++ V A ++ +P + K + ++ LC+ + A+ L +M DG P
Sbjct: 520 NASK-VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNG 225
+N +I + G+ ++V++++ L+ G D T ++ S+G
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 143/325 (44%), Gaps = 16/325 (4%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N ++ S K G+ + ++ + P+ T+ + I L +F+ + + Q
Sbjct: 198 VYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQ 257
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIEL-------GKYPPMPYINFLV 113
KM + P + +L W CK + +KAAIEL G + N L+
Sbjct: 258 KMEKSGYAPTIVTYNTVLHWYCKKGR-------FKAAIELLDHMKSKGVDADVCTYNMLI 310
Query: 114 AKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGP 173
L + N L +L+++ + + ++ V A QL+ EM++ G
Sbjct: 311 HDLCRSNRIAKGYL-LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 369
Query: 174 PPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARK 233
P + FN +I G+ G ++A++M ++E++GL P +Y V+ G E + AR
Sbjct: 370 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 429
Query: 234 ILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
K+ + + Y +I G CK DEAV LL EM + G+ ++ Y LI C
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489
Query: 294 LKAMDWETAEKLHAELKENGLYLKG 318
K ++TA+++ + GL G
Sbjct: 490 -KVGRFKTAKEIVCRIYRVGLSPNG 513
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 7/262 (2%)
Query: 38 TYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAA 97
TY I+ L + D A+ + +M P+ + L+ CK + K A +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 98 IELGKYPPMPYINFLV---AKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCR 154
+G P + L+ ++ E + + ++ E G R+ F +V +LC+
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE--GHTRD--HFTFNVLVTSLCK 560
Query: 155 VKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYT 214
V A++ M M +DG P F+ +I GY +GE +A + + G P +T
Sbjct: 561 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 620
Query: 215 YAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
Y + G GG + A K L+ + + V+Y++L+ CK +AV L EM
Sbjct: 621 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680
Query: 275 EFGVRVNVDEYDKLIQSLCLKA 296
+ + + Y LI LC K
Sbjct: 681 QRSILPDSYTYTSLISGLCRKG 702
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 2/272 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ F K+G+ K A E+ + PN Y I R A+ + + M+
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+ ++ L+ LCK K+ EA + G P + L+ E + A
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK-A 602
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
V E+ + ++++ LC+ + A++ + + A ++N ++T
Sbjct: 603 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 662
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL- 245
CK+G + +AV + + R + PD YTY + SG G+ A +EA+ + +VL
Sbjct: 663 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 722
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
V+Y + G K Q+ + +M G
Sbjct: 723 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 143/324 (44%), Gaps = 3/324 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ +S++GK + ++ + PN TY + + +R + + + ++
Sbjct: 763 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 822
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+P+ + L++ +C+ L+ + KA I G N L++K E +
Sbjct: 823 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE-IN 881
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A +++K + L K A+V L R ++ ++ EM G P + + +I
Sbjct: 882 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 941
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G C+ G+++ A + + + + + P + + + G+ + A +L K V
Sbjct: 942 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 1001
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
T + +L+ CK EA++L M G+++++ Y+ LI LC K D A +
Sbjct: 1002 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG-DMALAFE 1060
Query: 305 LHAELKENGLYLKGAT-RALIRAV 327
L+ E+K +G T +ALIR +
Sbjct: 1061 LYEEMKGDGFLANATTYKALIRGL 1084
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 99/259 (38%), Gaps = 2/259 (0%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
+ N LV S K GK A E PN+ ++ I A V +
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M P +++ G LL LCKG L+EA K+ + N L+ + +
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPP-PGNAVF 180
A+ + E+ + +++ LCR A E A G P ++
Sbjct: 669 LAK-AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+ G KAG+ + + + +++ G PD+ T + GYS G++E +L E
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787
Query: 241 KHSVLTPVIYHSLIRGYCK 259
++ Y+ L+ GY K
Sbjct: 788 QNGGPNLTTYNILLHGYSK 806
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P N ++ K+GE +K + R + PDV T+ ++ + G E +
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
++++ +K T V Y++++ YCK +F A++LL MK GV +V Y+ LI
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 292 LC 293
LC
Sbjct: 313 LC 314
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 148/343 (43%), Gaps = 37/343 (10%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + SK+ K + ++E+ ++ N T + + R S AL KM+
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + G LL C+G ++ +A ++ + +G P + N ++ L + + V A
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ-VDNA 205
Query: 127 LEVLKEIPGD---------------------------------RRELAKK--RFPAVVRA 151
L++L + D +RE+ F A++ A
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
+ V A++ EMI P ++ +I G C +++A EM + S+G PD
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT 271
V TY+++ +GY ++E K+ E ++ V V Y LI+GYC+ + + A ++
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 272 EMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
M GV N+ Y+ L+ LC E A + A++++NG+
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNG-KIEKALVILADMQKNGM 427
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 137/318 (43%), Gaps = 14/318 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ K + AL++ + E P+ TY I L + A + M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
P+ ++ L+ K ++ EA Y+ I P + + L+ L +
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR- 306
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVV------RALCRVKDVGTAKQLMLEMIADGPPPG 176
L+ +E+ G ++K FP VV C+ K V +L EM G
Sbjct: 307 ----LDEAEEMFG--FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+ +I GYC+AG++ A E+ + + G+ P++ TY V+ G + G++E A IL
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+ +K V Y+ +IRG CK + +A + + G+ ++ Y ++ L K
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 297 MDWETAEKLHAELKENGL 314
+ E A+ L ++KE+G+
Sbjct: 481 LRRE-ADALFRKMKEDGI 497
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 111/281 (39%), Gaps = 36/281 (12%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N L+ + K G+ A E +E+ +P+ TY L I L S D A +
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
M+ P+ + L+ CK KK++ ++ ++SQ
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF-------------------CEMSQR- 355
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
G R + +++ CR + A+++ M+ G P +
Sbjct: 356 --------------GVVRNTVT--YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N ++ G C G++E+A+ ++ ++ G+ D+ TY +I G GE+ A I
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNC 459
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
+ + Y +++ G K EA L +MKE G+ N
Sbjct: 460 QGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 146/319 (45%), Gaps = 12/319 (3%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N L+ F K+ + A V ++ P++ TY + I +L R D AL V
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
++L P + L+ + EA + + G P M N ++ + +E
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
V A E+++ + E + ++RAL ++LM +M ++ P +
Sbjct: 278 -MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+ +IT C+ G++E+A+ ++KL++ +GL PD Y+Y + + + G ++ A + LE
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+ V Y++++ CK + D+A+++ ++ E G N Y+ + +L W
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL------WS 450
Query: 301 TAEKLHA-----ELKENGL 314
+ +K+ A E+ NG+
Sbjct: 451 SGDKIRALHMILEMMSNGI 469
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 69 PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALE 128
P+ ++ L+ CK ++ +A V P N ++ L + + LAL+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK-LDLALK 214
Query: 129 VLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYC 188
VL ++ D + + ++ A V A +LM EM++ G P +N +I G C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 189 KAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPV 248
K G +++A EM++ LE +G PDV +Y ++ N G+ E K++ + + V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 249 IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
Y LI C+ + +EA+ LL MKE G+ + YD LI + C
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 133/292 (45%), Gaps = 1/292 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
M+ N ++ K G A E+ E+ CEP+ +Y + + AL + ++ +
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
KM + P + L+ LC+ K++EA + K E G P + L+A +E
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ +A+E L+ + D + V+ LC+ A ++ ++ G P ++ +
Sbjct: 383 R-LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N + + +G+ +A+ M+ + S G+ PD TY + S G ++ A ++L + +
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ V Y+ ++ G+CK + ++A+ +L M G R N Y LI+ +
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 104/220 (47%), Gaps = 1/220 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + + GK + A+ + + + P++++Y I A R D A+ + M+
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+P+ + +L LCK K +A ++ E+G P N + + L + + A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR-A 457
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
L ++ E+ + + + + +++ LCR V A +L+++M + P +N V+ G
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGG 226
+CKA +E A+ +++ + G RP+ TY V+ G G
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
+++ ++++ A ++M E++ P +N +I G+CK ++ A ++ + S+
Sbjct: 130 LIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
PD TY ++ + G+++ A K+L + + T + Y LI DEA+
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
KL+ EM G++ ++ Y+ +I+ +C + M
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 188 CKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTP 247
C++G +++ +++ + +G PDV + G+ + A +++ E +K
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 248 VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
Y++LI G+CKM + D+A ++L M+ + Y+ +I SLC +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 140/295 (47%), Gaps = 3/295 (1%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+ I N + F + + + AL E+ +V PN TY I + A+ + +
Sbjct: 277 LLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLE 336
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKA-AIELGKYPPMPYINFLVAKLSQE 119
M +P+ S ++ +LCK K++ E + K A E G P N L+ L++
Sbjct: 337 DMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKH 396
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGP-PPGNA 178
+ AL LK+ + K + A+V ALC+ + AK L+ EM++ G PP
Sbjct: 397 DHADE-ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+ V+ G+C+ GE+++A ++++++ + G +P+ +Y + +G G+ AR+++ +
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 515
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
++ + Y ++ G + + EA ++ EM G E + L+QSLC
Sbjct: 516 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 16/295 (5%)
Query: 7 LVFSFSKLGKGKAALEVF-EKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDA 65
+V + K G+ A ++ E C P+ TY + R D A + Q M
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 66 RSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPL 125
P S LL +C+ K EA + + E P + ++ L +E + +
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK-LSE 542
Query: 126 ALEVLKEIPGDRRELAKKRFPA------VVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
A +V++E+ + K FP ++++LCR A++ M E + G
Sbjct: 543 ACDVVREM------VLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
F VI G+C+ E++ A+ ++ + DV+TY + G + A +++++
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
K TPV Y ++I YC+M + D+ V +L +M + Y+++I+ LC+
Sbjct: 657 HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCV 709
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 121/302 (40%), Gaps = 38/302 (12%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ S+S+ G+ + AL+V + EPN TI+ R + + AL ++M
Sbjct: 248 VMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVG 307
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+P + ++ C +++EA
Sbjct: 308 IVPNVVTYNCMIRGYCDLHRVEEA------------------------------------ 331
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD-GPPPGNAVFNFVIT 185
+E+L+++ K + ++ LC+ K + + LM +M + G P +N +I
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIH 391
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA-KKKHSV 244
K ++A+ +K + +G R D Y+ I G M A+ ++ E K H
Sbjct: 392 MLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 451
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
V Y +++ G+C++ + D+A KLL M G + N Y L+ +C E E
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 305 LH 306
++
Sbjct: 512 MN 513
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 82/168 (48%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
+++ L + K ++++++ M G F+ V+ Y +AG++ A++++ L++
Sbjct: 212 SMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRA 271
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
G+ P++ + +E A + LE + V V Y+ +IRGYC + + +EA
Sbjct: 272 GVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA 331
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
++LL +M G + Y ++ LC + E + + KE+GL
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 6/308 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + GK A E+ E PNS TY + + L R A V ++M+
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFL-VAKLSQENETVPL 125
P + LL LC+ + EA + L K + +NF V +N+ +
Sbjct: 555 FFPGPVEINLLLQSLCRDGRTHEARKFMEEC--LNKGCAINVVNFTTVIHGFCQNDELDA 612
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
AL VL ++ + + +V L + + A +LM +M+ G P + VI
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
YC+ G+++ V +++ + SR +Y + G++E A +L + + S
Sbjct: 673 RYCQMGKVDDLVAILEKMISRQKCRTIYNQVI--EKLCVLGKLEEADTLLGKVLRTASRS 730
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
++L+ GY K A K+ M + +V +KL + L LK + A+KL
Sbjct: 731 DAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKG-KVDEADKL 789
Query: 306 HAELKENG 313
L E G
Sbjct: 790 MLRLVERG 797
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 127 LEVL---KEIPGDRRELA--KKR--------FPAVVRALCRVKDVGTAKQLMLEMIADGP 173
LEVL K G RR L K+R F V+ + R + A +++ M G
Sbjct: 214 LEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGV 273
Query: 174 PPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARK 233
P + N I + +A +E+A+ ++ ++ G+ P+V TY + GY + +E A +
Sbjct: 274 EPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIE 333
Query: 234 ILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM-KEFGVRVNVDEYDKLIQSL 292
+LE+ K + V Y++++ CK ++ E L+ +M KE G+ + Y+ LI L
Sbjct: 334 LLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHML 393
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 1/289 (0%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
+N +V K K A +FE+ + C P+ T+ I+ L + D A V +KML
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
D+ L+ + ++ H +YK I P + +N + + + E
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
+ +EI R + + ++ L + +L M G +N V
Sbjct: 535 K-GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I G+CK G++ +A ++++ ++++G P V TY + G + ++ A + EEAK K
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
L VIY SLI G+ K+ + DEA +L E+ + G+ N+ ++ L+ +L
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Query: 92 AVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
+++ ELG P + L+ ++E V AL +L E+ + + + +
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGR-VDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
+V V A + E+ A+G P + +I CKA +++AVEM + LE P
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT 271
Y Y + GY + G+ + A +LE + K S+ + + Y+ ++ KM + DEA+K+
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 272 EMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLY 315
EMK+ N+ Y+ LI LC +A +TA +L +++ GL+
Sbjct: 368 EMKK-DAAPNLSTYNILIDMLC-RAGKLDTAFELRDSMQKAGLF 409
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 121/271 (44%), Gaps = 2/271 (0%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ N + SF K+GK A + F + E +P+ TY I L + + D A+ + + +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
R +P Y+ +++ K EA+++ + G P + N ++ L + +
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK- 358
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
V AL+V +E+ D + ++ LCR + TA +L M G P N
Sbjct: 359 VDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ CK+ ++++A M + ++ + PD T+ + G G ++ A K+ E+
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
++Y SLI+ + + ++ K+ +M
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 12/313 (3%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ K+G+ A +V+EK C NS Y I+ + + + + M++
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE---NETV 123
P+ + + + K + ++ A+++ P + L+ L + NET
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET- 571
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
E+ + L + + V+ C+ V A QL+ EM G P + V
Sbjct: 572 ---YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I G K +++A + + +S+ + +V Y+ + G+ G ++ A ILEE +K
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG- 687
Query: 244 VLTPVIY--HSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
LTP +Y +SL+ K E+ +EA+ MKE N Y LI LC K +
Sbjct: 688 -LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC-KVRKFNK 745
Query: 302 AEKLHAELKENGL 314
A E+++ G+
Sbjct: 746 AFVFWQEMQKQGM 758
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/313 (18%), Positives = 125/313 (39%), Gaps = 37/313 (11%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+ +LN + K G+ + +FE+ + + P++ +Y + I L + + +
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
M + + + + ++ CK K+ +A+
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY----------------------------- 607
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
++L+E+ E + +V+ L ++ + A L E + ++
Sbjct: 608 -------QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+ +I G+ K G +++A +++ L +GL P++YT+ + E+ A + K+
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
V Y LI G CK+ +F++A EM++ G++ + Y +I L KA +
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA-KAGNIA 779
Query: 301 TAEKLHAELKENG 313
A L K NG
Sbjct: 780 EAGALFDRFKANG 792
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 128/315 (40%), Gaps = 18/315 (5%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ K G E+F + C ++ Y + I+ + + A + ++M
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAA----IELGKYPPMPYINFLVAKLSQENET 122
P + G ++ L K +L EA+ +++ A IEL I+ K+ + +E
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF-GKVGRIDE- 675
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
A +L+E+ + +++ AL + +++ A M P +
Sbjct: 676 ---AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I G CK + +A + ++ +G++P +Y + SG + G + A + + K
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN----VDEYDKLIQSLCLKAMD 298
V Y+++I G + +A L E + G+ ++ V D L ++ CL
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCL---- 848
Query: 299 WETAEKLHAELKENG 313
E A + A L+E G
Sbjct: 849 -EQAAIVGAVLRETG 862
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ +++ + R ++ Q++ EM G P ++ G KA ++ + ++++++
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
RP Y + +S + + ++ ++ T ++ +LIRG+ K + D
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
A+ LL EMK + ++ Y+ I S K + A K E++ NGL
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFG-KVGKVDMAWKFFHEIEANGL 269
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ ++ A V L +M G P +F +I G+ K G ++ A+ ++ ++
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
S L D+ Y V + G+++ A K E + V Y S+I CK + D
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 265 EAVKLLTEMKE 275
EAV++ +++
Sbjct: 291 EAVEMFEHLEK 301
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 152/384 (39%), Gaps = 70/384 (18%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N L+ + +K+ K + + EK + N +TY + I RRS AL +
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
KM+ P ++ LL C GK++ +A A+ +E+G P L+ L N
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 121 ET----------------------------------VPLALEVLKEIPGDRRELAKKRFP 146
+ + LA +L ++ + E +
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPG------------------------------ 176
V+ +LC+ + A L EM G P
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 177 ----NAV-FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
N V FN +I + K G++ +A ++ + R + PD++TY+ + +G+ ++ A
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+ + E K V Y++LI G+CK ++ DE V+L EM + G+ N Y LI
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 292 LCLKAMDWETAEKLHAELKENGLY 315
+A D + A+ + ++ +G++
Sbjct: 445 F-FQARDCDNAQMVFKQMVSDGVH 467
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 4/280 (1%)
Query: 52 FDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINF 111
D A+ + M+ +R +P + LL + K KK ++ + LG + N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 112 LVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD 171
L+ + ++ + LAL +L ++ E + +++ C K + A L+ +M+
Sbjct: 126 LINCFCRRSQ-ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P F +I G + +AV ++ + RG +P++ TY V+ +G G+++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+L + + VIY ++I CK D+A+ L TEM+ GVR NV Y LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 292 LCLKAMDWETAEKLHAELKENGLYLKGAT-RALIRA-VKE 329
LC W A +L +++ E + T ALI A VKE
Sbjct: 305 LC-NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 121/278 (43%), Gaps = 1/278 (0%)
Query: 16 KGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVG 75
K A+ + ++ C+PN TY + + L +R D A + KM A+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 76 DLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPG 135
++ LCK + +A ++ G P + + L++ L E A +L ++
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY-ERWSDASRLLSDMIE 323
Query: 136 DRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQ 195
+ F A++ A + + A++L EMI P ++ +I G+C +++
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
A M +L+ S+ P+V TY + +G+ ++ ++ E ++ V V Y +LI
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
G+ + D A + +M GV N+ Y+ L+ LC
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 136/342 (39%), Gaps = 37/342 (10%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
+V K G A + K E + E N Y I++L + D AL + +M +
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ LC ++ +A + IE P + N L+ +E + V A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE-A 349
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++ E+ + + +++ C + AK + MI+ P +N +I G
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 187 YCKAGEMEQAVEMMKLLESRGL-----------------------------------RPD 211
+CKA +++ VE+ + + RGL P+
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT 271
+ TY + G G++E A + E ++ T Y+ +I G CK + ++ L
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 272 EMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
+ GV+ +V Y+ +I C K + E A+ L +++E+G
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLK-EEADALFRKMREDG 570
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 8/214 (3%)
Query: 8 VFSFSKLGKG-------KAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+F++S L G A +FE C PN TY I + D + + +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M + + L+ + + A V+K + G +P + N L+ L + N
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK-N 483
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ A+ V + + + E + ++ +C+ V L + G P ++
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYT 214
N +I+G+C+ G E+A + + + G PD T
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 149/322 (46%), Gaps = 14/322 (4%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ + K G + + +V E+ + EP+ T+ ++ L++ + A V ++M D
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+P+ ++ L +K + A VY+ A++ G + L+ L +E +
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK--- 369
Query: 125 LALEVLKEIPGDRRELAKKRFP------AVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+E +EI G RE+AK P ++ CR D+ A+ + M G P +
Sbjct: 370 --IEKAEEILG--REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+N +I +C+ GEME A + + ++ +G+ P V TY ++ GY E + IL+E
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
+ ++ V Y +LI CK + EA + +M++ GV V Y+ LI C K
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG-K 544
Query: 299 WETAEKLHAELKENGLYLKGAT 320
E A + E+ + G+ L T
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVT 566
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 133/293 (45%), Gaps = 1/293 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++I N L+ K + A ++F++ + P+ TY I+ + + + V +
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M P + LL L K +++A V K +LG P + L S N
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS-N 332
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
E AL V + ++ ++ ALC+ + A++++ +A G P ++
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I GYC+ G++ A ++ +E +G++PD Y + + GEME A K + + K
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
K + Y+ LI GY + +FD+ +L EM++ G NV Y LI LC
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 7/303 (2%)
Query: 18 KAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDL 77
+ + VF P+ F Y I+A + S L + +M R P + L
Sbjct: 161 RVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVL 220
Query: 78 LVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDR 137
+ LCKGK++ +A ++ + P + N L+ + + +V + + D
Sbjct: 221 IDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK-SFKVRERMKADH 279
Query: 138 RELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAV 197
E + F +++ L + V A+ ++ EM G P F+ + GY + E A+
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 198 EMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGY 257
+ + G++ + YT +++ + G++E A +IL K V VIY+++I GY
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 258 CKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLK 317
C+ A + M++ G++ + Y+ LI+ C E E +AE + N + LK
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC------ELGEMENAEKEVNKMKLK 453
Query: 318 GAT 320
G +
Sbjct: 454 GVS 456
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 145/365 (39%), Gaps = 70/365 (19%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F +LG+ + A + K ++ P+ TY + I R+ FD + ++M D
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
++P S G L+ LCKG KL EA V + + G P + N L+ + + +
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK-IE 546
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A KE+ EL + ++ L + A+ L+LE+ G P +N +I
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 185 TGYCKAGEMEQAVEMMKLLESRG-------------------------------LRPDVY 213
+GY AG +++ + + + ++ G L+PD+
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLL 666
Query: 214 TYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI------------------- 254
Y + Y+ G+ME A + ++ +K L Y+SLI
Sbjct: 667 VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726
Query: 255 ----------------RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
+G+C+++ + A EM+E G ++V ++L+ L +
Sbjct: 727 NAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL---KEE 783
Query: 299 WETAE 303
W + E
Sbjct: 784 WRSKE 788
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 3/308 (0%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
Y + L+ + K GK + A E+ + PN Y I+ R+ A +
Sbjct: 355 YTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEA 414
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M P+ + L+ C+ +++ A G P + N L+ ++ E
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
++LKE+ + + ++ LC+ + A+ + +M G P ++N
Sbjct: 475 -FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYN 533
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I G C G++E A K + +G+ ++ TY + G S G++ A +L E +K
Sbjct: 534 MLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK 593
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
Y+SLI GY + L EMK G++ + Y LI SLC K E
Sbjct: 594 GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKE-GIEL 651
Query: 302 AEKLHAEL 309
E+L E+
Sbjct: 652 TERLFGEM 659
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 2/246 (0%)
Query: 69 PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALE 128
P S+ LL L K K+ + V+ +E + P ++ + + + V LE
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILE-SDFRPSKFMYGKAIQAAVKLSDVGKGLE 200
Query: 129 VLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYC 188
+ + DR + + ++ LC+ K + A+QL EM+A P +N +I GYC
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC 260
Query: 189 KAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPV 248
KAG E++ ++ + +++ + P + T+ + G G +E A +L+E K V
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320
Query: 249 IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAE 308
+ L GY E+ + A+ + + GV++N L+ +LC K E AE++
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC-KEGKIEKAEEILGR 379
Query: 309 LKENGL 314
GL
Sbjct: 380 EMAKGL 385
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 132/304 (43%), Gaps = 37/304 (12%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ +GK + ALE+ F CEP+ TY I+ + + + A + + +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 64 DARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
P+ + ++ CK K++EA ++ + LG YP N LV ++ E
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ TA+++ +MI+ G P F
Sbjct: 329 L------------------------------------TAEEIRGKMISFGCFPDVVTFTS 352
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I GYC+ G++ Q + + + +RG+ P+ +TY+++ + N + AR++L + K
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
+ P +Y+ +I G+CK + +EA ++ EM++ + + + LI C+K +E
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 303 EKLH 306
H
Sbjct: 473 SIFH 476
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 4/208 (1%)
Query: 107 PYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLML 166
P+I+F V K N + + R + + + R+LC+ A Q+
Sbjct: 69 PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRH-SFWTYNLLTRSLCKAGLHDLAGQMFE 127
Query: 167 EMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGG 226
M +DG P N + F+++ + + G++ A + LL+S + + +
Sbjct: 128 CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL--LLQSFEVEGCCMVVNSLLNTLVKLD 185
Query: 227 EMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYD 286
+E A K+ +E + S ++ LIRG C + + ++A++LL M FG ++ Y+
Sbjct: 186 RVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYN 245
Query: 287 KLIQSLCLKAMDWETAEKLHAELKENGL 314
LIQ C K+ + A ++ ++K +
Sbjct: 246 TLIQGFC-KSNELNKASEMFKDVKSGSV 272
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 94/238 (39%), Gaps = 1/238 (0%)
Query: 6 DLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDA 65
++ + K GK + A + + P + T+ + ++ + A + KM+
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 66 RSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPL 125
P+ + L+ C+ ++ + +++ G +P + L+ L EN +
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK- 400
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
A E+L ++ + V+ C+ V A ++ EM P F +I
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
G+C G M +AV + + + G PD T + + S G + A + + A+K S
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQS 518
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 132/304 (43%), Gaps = 37/304 (12%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ +GK + ALE+ F CEP+ TY I+ + + + A + + +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 64 DARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
P+ + ++ CK K++EA ++ + LG YP N LV ++ E
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ TA+++ +MI+ G P F
Sbjct: 329 L------------------------------------TAEEIRGKMISFGCFPDVVTFTS 352
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I GYC+ G++ Q + + + +RG+ P+ +TY+++ + N + AR++L + K
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
+ P +Y+ +I G+CK + +EA ++ EM++ + + + LI C+K +E
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 303 EKLH 306
H
Sbjct: 473 SIFH 476
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 4/208 (1%)
Query: 107 PYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLML 166
P+I+F V K N + + R + + + R+LC+ A Q+
Sbjct: 69 PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRH-SFWTYNLLTRSLCKAGLHDLAGQMFE 127
Query: 167 EMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGG 226
M +DG P N + F+++ + + G++ A + LL+S + + +
Sbjct: 128 CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL--LLQSFEVEGCCMVVNSLLNTLVKLD 185
Query: 227 EMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYD 286
+E A K+ +E + S ++ LIRG C + + ++A++LL M FG ++ Y+
Sbjct: 186 RVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYN 245
Query: 287 KLIQSLCLKAMDWETAEKLHAELKENGL 314
LIQ C K+ + A ++ ++K +
Sbjct: 246 TLIQGFC-KSNELNKASEMFKDVKSGSV 272
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 94/238 (39%), Gaps = 1/238 (0%)
Query: 6 DLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDA 65
++ + K GK + A + + P + T+ + ++ + A + KM+
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 66 RSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPL 125
P+ + L+ C+ ++ + +++ G +P + L+ L EN +
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK- 400
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
A E+L ++ + V+ C+ V A ++ EM P F +I
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
G+C G M +AV + + + G PD T + + S G + A + + A+K S
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQS 518
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 146/322 (45%), Gaps = 2/322 (0%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ L+ F K G +AA + F + P+ TY I + A + +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
P+ + +L+ CK +K+A V+ I+ G P + L+ L +E +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD- 471
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A E+L E+ + + ++V LC+ ++ A +L+ E A G +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ YCK+GEM++A E++K + +GL+P + T+ V+ +G+ G +E K+L K
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
++SL++ YC A + +M GV + Y+ L++ C KA + + A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC-KARNMKEA 650
Query: 303 EKLHAELKENGLYLKGATRALI 324
L E+K G + +T +++
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVL 672
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPP--MPYINFLVAKLS-QENETVPLALEVLKEIPGD 136
++C+ ++KEAH + +EL Y P + Y + E + V +EV+K
Sbjct: 255 FVCQLGRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK----- 308
Query: 137 RRELAKKRF--PAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEME 194
R+ L + +++ LCR+ + A++ EMI G P V+ +I G+CK G++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI 254
A + + SR + PDV TY I SG+ G+M A K+ E K V + LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 255 RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
GYCK +A ++ M + G NV Y LI LC K D ++A +L E+ + GL
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC-KEGDLDSANELLHEMWKIGL 487
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 134/336 (39%), Gaps = 37/336 (11%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ +LG+ K A + E+ P+ +Y + R D + + M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P Y G ++ LC+ KL EA + I G P L+ + + +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD-IR 368
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A + E+ + A++ C++ D+ A +L EM G P + F +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 185 TGYCKAG-----------------------------------EMEQAVEMMKLLESRGLR 209
GYCKAG +++ A E++ + GL+
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 210 PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
P+++TY I +G G +E A K++ E + V Y +L+ YCK + D+A ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 270 LTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
L EM G++ + ++ L+ CL M E EKL
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGM-LEDGEKL 583
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 2/308 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ F ++G A ++F + EP+S T+ I + A V M+ A
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ LCK L A+ + ++G P + N +V L + + A
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG-NIEEA 510
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++++ E + ++ A C+ ++ A++++ EM+ G P FN ++ G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+C G +E +++ + ++G+ P+ T+ + Y ++AA I ++ +
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
Y +L++G+CK EA L EMK G V+V Y LI+ LK + A ++
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF-LKRKKFLEAREVF 689
Query: 307 AELKENGL 314
+++ GL
Sbjct: 690 DQMRREGL 697
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 121/283 (42%), Gaps = 1/283 (0%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
+L+ + K G K A V C PN TY I+ L + D A + +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
P ++ ++ LCK ++EA + G L+ + E +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE-M 542
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
A E+LKE+ G + F ++ C + ++L+ M+A G P FN +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
+ YC ++ A + K + SRG+ PD TY + G+ M+ A + +E K K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYD 286
++ Y LI+G+ K ++F EA ++ +M+ G+ + + +D
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 87 LKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFP 146
L+EA V++ + G + N + +LS++ A+ V +E P +
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
V+ +C++ + A L+L M G P ++ V+ GYC+ GE+++ +++++++ +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
GL+P+ Y Y I ++ A + E ++ + V+Y +LI G+CK A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
K EM + +V Y +I C + D A KL E+ GL
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFC-QIGDMVEAGKLFHEMFCKGL 417
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 146/322 (45%), Gaps = 2/322 (0%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ L+ F K G +AA + F + P+ TY I + A + +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
P+ + +L+ CK +K+A V+ I+ G P + L+ L +E +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD- 471
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A E+L E+ + + ++V LC+ ++ A +L+ E A G +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ YCK+GEM++A E++K + +GL+P + T+ V+ +G+ G +E K+L K
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
++SL++ YC A + +M GV + Y+ L++ C KA + + A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC-KARNMKEA 650
Query: 303 EKLHAELKENGLYLKGATRALI 324
L E+K G + +T +++
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVL 672
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPP--MPYINFLVAKLS-QENETVPLALEVLKEIPGD 136
++C+ ++KEAH + +EL Y P + Y + E + V +EV+K
Sbjct: 255 FVCQLGRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK----- 308
Query: 137 RRELAKKRF--PAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEME 194
R+ L + +++ LCR+ + A++ EMI G P V+ +I G+CK G++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI 254
A + + SR + PDV TY I SG+ G+M A K+ E K V + LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 255 RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
GYCK +A ++ M + G NV Y LI LC K D ++A +L E+ + GL
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC-KEGDLDSANELLHEMWKIGL 487
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 134/336 (39%), Gaps = 37/336 (11%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ +LG+ K A + E+ P+ +Y + R D + + M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P Y G ++ LC+ KL EA + I G P L+ + + +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD-IR 368
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A + E+ + A++ C++ D+ A +L EM G P + F +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 185 TGYCKAG-----------------------------------EMEQAVEMMKLLESRGLR 209
GYCKAG +++ A E++ + GL+
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 210 PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
P+++TY I +G G +E A K++ E + V Y +L+ YCK + D+A ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 270 LTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
L EM G++ + ++ L+ CL M E EKL
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGM-LEDGEKL 583
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 2/308 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ F ++G A ++F + EP+S T+ I + A V M+ A
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ LCK L A+ + ++G P + N +V L + + A
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG-NIEEA 510
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++++ E + ++ A C+ ++ A++++ EM+ G P FN ++ G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+C G +E +++ + ++G+ P+ T+ + Y ++AA I ++ +
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
Y +L++G+CK EA L EMK G V+V Y LI+ LK + A ++
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF-LKRKKFLEAREVF 689
Query: 307 AELKENGL 314
+++ GL
Sbjct: 690 DQMRREGL 697
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 121/283 (42%), Gaps = 1/283 (0%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
+L+ + K G K A V C PN TY I+ L + D A + +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
P ++ ++ LCK ++EA + G L+ + E +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE-M 542
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
A E+LKE+ G + F ++ C + ++L+ M+A G P FN +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
+ YC ++ A + K + SRG+ PD TY + G+ M+ A + +E K K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYD 286
++ Y LI+G+ K ++F EA ++ +M+ G+ + + +D
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 87 LKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFP 146
L+EA V++ + G + N + +LS++ A+ V +E P +
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
V+ +C++ + A L+L M G P ++ V+ GYC+ GE+++ +++++++ +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
GL+P+ Y Y I ++ A + E ++ + V+Y +LI G+CK A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
K EM + +V Y +I C + D A KL E+ GL
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFC-QIGDMVEAGKLFHEMFCKGL 417
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 136/307 (44%), Gaps = 2/307 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ K G A +F + E+ + + TY I +D + + M+ +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ K KL+EA + K ++ G P N L+ +EN + A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR-LEEA 387
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++++ + + F ++ C+ + +L EM G +N ++ G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+C++G++E A ++ + + SR +RPD+ +Y ++ G + GE+E A +I + +K L
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
IY +I G C + D+A L + GV+++ Y+ +I LC K A+ L
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD-SLSKADILF 566
Query: 307 AELKENG 313
++ E G
Sbjct: 567 RKMTEEG 573
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 138/301 (45%), Gaps = 17/301 (5%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+ LN LV GK A+ + ++ +PN TY + + + A+ + +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 61 KMLDARSI---PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS 117
KM + R+I YS+ ++ LCK L A ++ G + N L+
Sbjct: 253 KM-EERNIKLDAVKYSI--IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 118 QE---NETVPLALEVLKEIPGDRRELAKK--RFPAVVRALCRVKDVGTAKQLMLEMIADG 172
++ L +++K R+++ F ++ + + + A QL+ EM+ G
Sbjct: 310 NAGRWDDGAKLLRDMIK------RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 173 PPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAAR 232
P +N +I G+CK +E+A++M+ L+ S+G PD+ T+ ++ +GY ++
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 233 KILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
++ E + + V Y++L++G+C+ + + A KL EM VR ++ Y L+ L
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 293 C 293
C
Sbjct: 484 C 484
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 35/318 (11%)
Query: 37 FTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKA 96
+T + I R +A K++ P+ LL LC ++ EA +
Sbjct: 124 YTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR 183
Query: 97 AIELGKYPPMPYINFLVAKLS--------------------QENET-------------- 122
+E+G P + +N LV L Q NE
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
LA+E+L+++ +L ++ ++ LC+ + A L EM G +N
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I G+C AG + ++++ + R + P+V T++V+ + G++ A ++L+E ++
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
+ Y+SLI G+CK + +EA++++ M G ++ ++ LI C KA +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC-KANRIDDG 422
Query: 303 EKLHAELKENGLYLKGAT 320
+L E+ G+ T
Sbjct: 423 LELFREMSLRGVIANTVT 440
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 131/310 (42%), Gaps = 2/310 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F G+ ++ + PN T+ + I++ + A + ++M+
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P + L+ CK +L+EA + I G P + N L+ + N +
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR-ID 420
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
LE+ +E+ + +V+ C+ + AK+L EM++ P + ++
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G C GE+E+A+E+ +E + D+ Y +I G N +++ A + K
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
L Y+ +I C+ + +A L +M E G + Y+ LI++ L D TA +
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH-LGDDDATTAAE 599
Query: 305 LHAELKENGL 314
L E+K +G
Sbjct: 600 LIEEMKSSGF 609
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 116/294 (39%), Gaps = 37/294 (12%)
Query: 16 KGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVG 75
K A+++F + P + A+ + ++ L +C++M Y++
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 76 DLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPG 135
++ C+ +KL A + ++LG P N L+ L E
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE---------------- 171
Query: 136 DRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQ 195
CRV + A +L+ M+ G P N ++ G C G++
Sbjct: 172 -----------------CRVSE---ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
AV ++ + G +P+ TY + + G+ A ++L + ++++ L V Y +I
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAEL 309
G CK D A L EM+ G + ++ Y+ LI C A W+ KL ++
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC-NAGRWDDGAKLLRDM 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 120/292 (41%), Gaps = 1/292 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ SF K GK + A ++ ++ PN+ TY I+ + + + A+ + M+
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ + L+ CK ++ + +++ G N LV Q + + +A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK-LEVA 457
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++ +E+ R + ++ LC ++ A ++ ++ ++ +I G
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
C A +++ A ++ L +G++ D Y ++ S + A + + ++
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
+ Y+ LIR + + A +L+ EMK G +V +I L +D
Sbjct: 578 ELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELD 629
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 130/278 (46%), Gaps = 6/278 (2%)
Query: 18 KAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDL 77
K A+ VF++ V +F + L R + A +KML+ + + S+ L
Sbjct: 55 KNAVSVFQQ-AVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGL 113
Query: 78 LVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDR 137
L + +K A V ++ G + N L+ L + N A+ +L+E+ R
Sbjct: 114 LECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCR-NLECGKAVSLLREMR--R 170
Query: 138 RELAKKRFP--AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQ 195
L F V+R C K++ A +L EM G + +I +CKAG+M++
Sbjct: 171 NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
A+ +K ++ GL D+ Y + G+ + GE++ + + +E ++ + Y++LIR
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
G+CK+ Q EA ++ M E GVR NV Y LI LC
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 35 NSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVY 94
N + + + ++ L R A+ + ++M +P+ +S ++ C+GK+L++A +
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 95 KAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCR 154
G + L+ + + + A+ LKE+ E + +++R C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGK-MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 155 VKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYT 214
++ K L E++ G P +N +I G+CK G++++A E+ + + RG+RP+VYT
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 215 YAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
Y + G G+ + A ++L +K V Y+ +I CK +AV+++ MK
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 275 EFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
+ R + Y+ L+ LC K D + A KL
Sbjct: 380 KRRTRPDNITYNILLGGLCAKG-DLDEASKL 409
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 141/320 (44%), Gaps = 23/320 (7%)
Query: 8 VFSFSKLGKG-------KAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
VFS++ + +G + ALE+ + + C + T+ + I+A + D A+ +
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLV---AKLS 117
+M + L+ C +L A++ +E G P N L+ KL
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
Q E + E + E G R + + ++ LC V A QL+ MI P
Sbjct: 297 QLKEASEI-FEFMIE-RGVRPNVYT--YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
+N +I CK G + AVE+++L++ R RPD TY ++ G G+++ A K+L
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 238 AKKKHSVLTP--VIYHSLIRGYCKMEQFDEAV---KLLTEMKEFGVRVNVDEYDKLIQSL 292
K S P + Y++LI G CK + +A+ LL E G RV + ++ +
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN----ILLNS 468
Query: 293 CLKAMDWETAEKLHAELKEN 312
LKA D A +L ++ ++
Sbjct: 469 TLKAGDVNKAMELWKQISDS 488
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 9/306 (2%)
Query: 13 KLGKGKAAL-EVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEW 71
+L +GKA EV E+ + P + TY I + A + + M++ P
Sbjct: 262 ELDRGKALFDEVLERGD----SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 72 YSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLK 131
Y+ L+ LC K KEA + IE + P N ++ KL ++ V A+E+++
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG-LVADAVEIVE 376
Query: 132 EIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGP--PPGNAVFNFVITGYCK 189
+ R + ++ LC D+ A +L+ M+ D P +N +I G CK
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436
Query: 190 AGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI 249
+ QA+++ LL + D T ++ + G++ A ++ ++ V
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAEL 309
Y ++I G+CK + A LL +M+ ++ +V +Y+ L+ SLC K + A +L E+
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC-KEGSLDQAWRLFEEM 555
Query: 310 KENGLY 315
+ + +
Sbjct: 556 QRDNNF 561
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 15/298 (5%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y L+ +GK K AL++ EPN+ TY + I L + A+ + +
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKY--PPMPYINFLVAKLSQ 118
M R+ P+ + LL LC L EA + ++ Y P + N L+ L +
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436
Query: 119 ENETVPLALEVLKEI-----PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGP 173
EN + AL++ + GDR ++ + + DV A +L + I+D
Sbjct: 437 ENR-LHQALDIYDLLVEKLGAGDRVTT-----NILLNSTLKAGDVNKAMELW-KQISDSK 489
Query: 174 PPGNA-VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAAR 232
N+ + +I G+CK G + A ++ + L+P V+ Y + S G ++ A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 233 KILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
++ EE ++ ++ V ++ +I G K A LL M G+ ++ Y KLI
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 103/264 (39%), Gaps = 38/264 (14%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ K G A+E+ E + + P++ TY + + L + D A + ML
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Query: 65 ARSI--PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
S P+ S L+ LCK +L +A +Y +E N L+ + +
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD- 474
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLML---------------- 166
V A+E+ K+I + + A++ C+ + AK L+
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 167 -------------------EMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
EM D P FN +I G KAG+++ A ++ + G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 208 LRPDVYTYAVIASGYSNGGEMEAA 231
L PD++TY+ + + + G ++ A
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEA 618
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 148/314 (47%), Gaps = 2/314 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y L +V + G+ + + ++ ++F V +P ++TY I A ++ F V +
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
M + + L+ K K+ +A ++ E G + L++ ++
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ A + E+ + + A++ +C+V ++G A+ LM EM + G VF
Sbjct: 344 -NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I GYC+ G +++A + ++E +G + DV+T IAS ++ + A++ L +
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
L+ V Y +LI YCK +EA +L EM GV+ N Y+ +I + C K +
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC-KQGKIK 521
Query: 301 TAEKLHAELKENGL 314
A KL A ++ NG+
Sbjct: 522 EARKLRANMEANGM 535
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 1/278 (0%)
Query: 15 GKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSV 74
G K A +F++ P+S+TY I+ + + A + +M
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 75 GDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIP 134
L+ C+ + EA +Y + G + N + + ++ + + +
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 135 GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEME 194
G + L+ + ++ C+ +V AK+L +EM + G P +N +I YCK G+++
Sbjct: 463 GGVK-LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI 254
+A ++ +E+ G+ PD YTY + G ++ A ++ E K V Y +I
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 255 RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
G K + DEA L EMK G ++ Y LI S+
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 109 INFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEM 168
I FLVA +++ + L LE+ + + ++ VV LCR +V +K+L+ E
Sbjct: 193 IVFLVA--AKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEF 250
Query: 169 IADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEM 228
G P +N +I Y K + ++K+++ G+ + TY ++ G+M
Sbjct: 251 SVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKM 310
Query: 229 EAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
A K+ +E +++ +Y SLI C+ A L E+ E G+ + Y L
Sbjct: 311 SDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL 370
Query: 289 IQSLCLKAMDWETAEKLHAELKENGLYL 316
I +C K + AE L E++ G+ +
Sbjct: 371 IDGVC-KVGEMGAAEILMNEMQSKGVNI 397
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 7/292 (2%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ F K+G+ + FE+ + CEP+ TY I + L ++M
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP-MPYINFLVA--KLSQENE 121
P S L+ CK +++A Y +G P Y + + A K+ ++
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
L E+L+ E + A++ LC + + A++L +M G P A +N
Sbjct: 421 AFRLGNEMLQV----GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I G+ KA M++A+E++ L+ RG++PD+ Y G + ++EAA+ ++ E K+
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+IY +L+ Y K E + LL EMKE + V V + LI LC
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 135/310 (43%), Gaps = 2/310 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F+KLGK F+ P FTY + I+ + + + A + ++M
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+P+ + ++ K +L + ++ ++ P + N L+ + + +P
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK-LP 349
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
+ LE +E+ G+ + + +V A C+ + A + ++M G P + +I
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
CK G + A + + G+ +V TY + G + M+ A ++ + +
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
Y++LI G+ K + D A++LL E+K G++ ++ Y I LC E A+
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC-SLEKIEAAKV 528
Query: 305 LHAELKENGL 314
+ E+KE G+
Sbjct: 529 VMNEMKECGI 538
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 106/265 (40%), Gaps = 6/265 (2%)
Query: 18 KAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSI-PEWYSVGD 76
K A E+F K + PN +Y I + D AL + + L R I P+ G
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE-LKGRGIKPDLLLYGT 512
Query: 77 LLVWLCKGKKLKEAHAVYKAAIELG-KYPPMPYINFLVAKLSQENETVPLALEVLKEIPG 135
+ LC +K++ A V E G K + Y + A N T L +L E+
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE--GLHLLDEMKE 570
Query: 136 DRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD-GPPPGNAVFNFVITGYCKAGEME 194
E+ F ++ LC+ K V A + D G A+F +I G CK ++E
Sbjct: 571 LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 630
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI 254
A + + + +GL PD Y + G G + A + ++ + L + Y SL+
Sbjct: 631 AATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Query: 255 RGYCKMEQFDEAVKLLTEMKEFGVR 279
G Q +A L EM G+
Sbjct: 691 WGLSHCNQLQKARSFLEEMIGEGIH 715
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 128/324 (39%), Gaps = 41/324 (12%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
LV +F K G + A++ + PN +TY I+A + A + +ML
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 67 SIPEWYSVG--DLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
EW V L+ LC +++KEA ++ G P + N L+ + + +
Sbjct: 433 V--EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA-KNMD 489
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
ALE+L E+ G + + + LC ++ + AK +M EM G + ++ ++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 185 TGYCKAGEMEQAVEMM------------------------------------KLLESRGL 208
Y K+G + + ++ ++ GL
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVK 268
+ + + + G ++EAA + E+ +K V Y SL+ G K EA+
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 269 LLTEMKEFGVRVNVDEYDKLIQSL 292
L +M E G+++++ Y L+ L
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGL 693
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 142/308 (46%), Gaps = 3/308 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ S+ KLG+ +A+ +F++ + +P Y + ++ + AL + ++M A
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P Y+ +L+ L K ++ EA+ YK + G P + ++N L+ L + L
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVK-DVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
V E+ R + V++AL K V +M AD P ++ +I
Sbjct: 359 -NVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
GYCK +E+A+ +++ ++ +G P Y + + EAA ++ +E K+ +
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV 477
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
+ +Y +I+ + K + EAV L EMK G +V Y+ L+ + M E A L
Sbjct: 478 SSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINE-ANSL 536
Query: 306 HAELKENG 313
+++ENG
Sbjct: 537 LRKMEENG 544
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 144/305 (47%), Gaps = 11/305 (3%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
LN+L+ K+G+ + VF + +++C P +Y I+AL+ A +
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 63 LDARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
+ A S+ P ++ L+ CK ++++A + + E G +PP P + + +
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKG-FPPCPAAYCSLINALGKAK 458
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
A E+ KE+ + ++ + + +++ + + A L EM G P +N
Sbjct: 459 RYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+++G KAG + +A +++ +E G R D+ ++ +I +G++ G A ++ E K
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK-- 576
Query: 242 HSVLTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
HS + P V Y++L+ + F+EA +++ EMK+ G EYD + S L A+
Sbjct: 577 HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF-----EYDAITYSSILDAVGN 631
Query: 300 ETAEK 304
EK
Sbjct: 632 VDHEK 636
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 138/321 (42%), Gaps = 7/321 (2%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I L+ + K+GK + AL++FE+ + C P +TY I+ L + D A + M
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYI---NFLVAKLSQE 119
L P+ + +L+ L K +++E V+ E+G + P + N ++ L +
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFS---EMGMWRCTPTVVSYNTVIKALFES 386
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
V ++ D ++ + ++ C+ V A L+ EM G PP A
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+ +I KA E A E+ K L+ YAV+ + G++ A + E K
Sbjct: 447 YCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMK 506
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+ S Y++L+ G K +EA LL +M+E G R +++ ++ ++ +
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Query: 300 ETAEKLHAELKENGLYLKGAT 320
E + +K +G+ G T
Sbjct: 567 RAIE-MFETIKHSGIKPDGVT 586
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 146 PAV----VRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMK 201
PAV V+AL R K V A + + P ++ +N VI + G+ E+ E+
Sbjct: 162 PAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYT 221
Query: 202 LLESRG-LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKM 260
+ + G PD TY+ + S Y G ++A ++ +E K T IY +L+ Y K+
Sbjct: 222 EMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 261 EQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+ ++A+ L EMK G V Y +LI+ L KA + A + ++ +GL
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG-KAGRVDEAYGFYKDMLRDGL 334
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 129/321 (40%), Gaps = 22/321 (6%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+L++LV + + AL VF + + +C+P S TY I L + + V +M
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 63 LD-ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGK---------YPPMPYINFL 112
+ P+ + L + +KL + + E+ Y + I F
Sbjct: 224 CNEGDCFPDTITYSAL---ISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFK 280
Query: 113 VAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADG 172
V K+ + AL++ +E+ + +++ L + V A +M+ DG
Sbjct: 281 VGKVEK-------ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG 333
Query: 173 PPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTY-AVIASGYSNGGEMEAA 231
P N ++ K G +E+ + + P V +Y VI + + + +
Sbjct: 334 LTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEV 393
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
++ K + Y LI GYCK + ++A+ LL EM E G Y LI +
Sbjct: 394 SSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA 453
Query: 292 LCLKAMDWETAEKLHAELKEN 312
L KA +E A +L ELKEN
Sbjct: 454 LG-KAKRYEAANELFKELKEN 473
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 3/289 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ SF KLG + L V+ K + EP +TY + L D A V + M
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELG-KYPPMPYINFLVAKLSQENETV 123
R P+ + ++ CK + ++A + G + + Y+ + A + +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
+AL +E+ ++ F V+ LC+ + + MI G P A++ +
Sbjct: 311 CVAL--YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 368
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I GY K+G +E A+ ++ + G +PDV TY+V+ +G G +E A +
Sbjct: 369 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL 428
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ + Y SLI G K + DEA +L EM E G + Y+ LI +
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 42/274 (15%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ + K G+ + A+E E E + TY I+A Y S F + + Q+M D
Sbjct: 261 NTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM-D 319
Query: 65 ARSI---PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
+ I P +S+ ++ LCK KL E + V++ I G P + L+ ++
Sbjct: 320 EKGIQVPPHAFSL--VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
V A +L+ MI +G P ++
Sbjct: 378 ------------------------------------VEDAIRLLHRMIDEGFKPDVVTYS 401
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
V+ G CK G +E+A++ GL + Y+ + G G ++ A ++ EE +K
Sbjct: 402 VVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEK 461
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKE 275
Y++LI + K + DEA+ L M+E
Sbjct: 462 GCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ ++V L KDV + + E+ P + N +I + K G +E+ + + + ++
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G+ P +YTY + +G + +++A ++ E + V Y+++I+GYCK Q
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+A++ L +M+ G + Y +IQ+ C D+ + L+ E+ E G+
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQA-CYADSDFGSCVALYQEMDEKGI 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 158 VGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTY-- 215
V +A+++ M + P +N +I GYCKAG+ ++A+E ++ +E+RG D TY
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 216 ---------------------------------AVIASGYSNGGEMEAARKILEEAKKKH 242
+++ G G++ + E +K
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
S IY LI GY K ++A++LL M + G + +V Y ++ LC E
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 303 EKLHA 307
+ H
Sbjct: 418 DYFHT 422
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 139 ELAKKRFPAVVRA----LCRVKDVGTAKQLML---EMIADGPPPGNAVFNFVITGYCKAG 191
E+ K FP V A + +G ++L+ +M +G P +NF++ G A
Sbjct: 177 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
++ A + +++ES ++PD+ TY + GY G+ + A + L + + + + Y
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
++I+ F V L EM E G++V + +I LC
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC 338
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 133/324 (41%), Gaps = 38/324 (11%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSA-FDWALPVCQ 60
Y L+ +++K+G + A+E F + + F C P+ FTY + + + R F A V
Sbjct: 128 YCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYN 187
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+ML P Y+ G L+ L K + +A ++ G P
Sbjct: 188 EMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP---------------- 231
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ + ++ LC+ A++L EM G P +
Sbjct: 232 --------------------NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N ++ G+CK G M +A E+++L E G + Y+ + G A ++ K
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
K+ ++Y LI+G K + ++A+KLL+ M G+ + Y+ +I++LC + + E
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL-LE 390
Query: 301 TAEKLHAELKENGLYLKGATRALI 324
L E+ E + T ++
Sbjct: 391 EGRSLQLEMSETESFPDACTHTIL 414
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 7/257 (2%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ SK GK + AL++ P+++ Y I+AL R + + +M +
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
S P+ + L+ +C+ ++EA ++ + G P + N L+ L + E
Sbjct: 404 SFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEAR 463
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGT---AKQLMLEMIADGPPPGNAVFNFV 183
L + K G L + + R+ + + G+ A + + G P +N +
Sbjct: 464 LLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVL 523
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK-KH 242
I G+C+AG+++ A++++ +L+ +GL PD TY + +G G E A K+ +H
Sbjct: 524 INGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH 583
Query: 243 SVLTPVIYHSLIRGYCK 259
S P +Y SL+ C+
Sbjct: 584 S---PAVYRSLMTWSCR 597
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 36/293 (12%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y L+ K G+ A ++F+ PN TY + I L +R + D A +
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFY 257
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M + + P+ + LL CK ++ E
Sbjct: 258 EMQTSGNYPDSVAHNALLDGFCKLGRMVE------------------------------- 286
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
A E+L+ D L + + +++ L R + A +L M+ P ++
Sbjct: 287 -----AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILY 341
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+I G KAG++E A++++ + S+G+ PD Y Y + G +E R + E +
Sbjct: 342 TILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSE 401
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
S + LI C+ EA ++ TE+++ G +V ++ LI LC
Sbjct: 402 TESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLC 454
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 1/283 (0%)
Query: 12 SKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEW 71
+K+ + + +FE+ ++ P T + + + S A KM+ P+
Sbjct: 94 AKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDL 153
Query: 72 YSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLK 131
+ LL C ++++A A++ + +G P + L+ L + N + A+E+
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK-NRHLNHAVELFN 212
Query: 132 EIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAG 191
++ + + A+V LC + G A L+ +M+ P F +I + K G
Sbjct: 213 QMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG 272
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
++ +A E+ ++ + PDV+TY + +G G ++ AR++ ++ VIY
Sbjct: 273 KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYT 332
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
+LI G+CK ++ ++ +K+ EM + GV N Y LIQ CL
Sbjct: 333 TLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 126/300 (42%), Gaps = 12/300 (4%)
Query: 20 ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLV 79
A+E+F + PN TY + L + A + + M+ R P + L+
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS-----QENETVPLALEVLKEIP 134
K KL EA +Y I++ YP + L+ L E + +E P
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 135 GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEME 194
+ + ++ C+ K V ++ EM G + +I GYC G +
Sbjct: 327 NE------VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI 254
A E+ + SR PD+ TY V+ G G++E A I E +K+ + V Y +I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 255 RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+G CK+ + ++A L + G++ NV Y +I C + + E A+ L ++KE+G
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE-ADSLFKKMKEDGF 499
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 1/281 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N LV ++G+ A + + EPN T+ I+A + A + M+
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P+ ++ G L+ LC L EA ++ G YP L+ + ++ V
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK-SKRVE 345
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
+++ E+ + +++ C V A+++ +M + PP +N ++
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G C G++E+A+ + + + R + ++ TY +I G G++E A + K
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEY 285
+ Y ++I G+C+ EA L +MKE G N Y
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 4/210 (1%)
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
AL++ + R + F ++ + ++ L +M G PP N V+
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
C + + +A + + G PD+ T+ + +GY + +E A + ++
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC----LKAMDWET 301
V Y +LIR CK + AV+L +M G R NV Y+ L+ LC W
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 302 AEKLHAELKENGLYLKGATRALIRAVKEME 331
+ + ++ N + A ++ K ME
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLME 276
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 19/330 (5%)
Query: 3 ILNDLVFSFSKLGKGKAALEVF-----------EKFEVFQC-EPNSFTYYLT-----IEA 45
I+N L +FS G + ++ E E F FT + I +
Sbjct: 150 IVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGS 209
Query: 46 LYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP 105
L R + A V Q++ + Y++ ++ LCK K+++ E G YP
Sbjct: 210 LVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPD 269
Query: 106 MPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLM 165
+ N L++ S + + A E++ +PG + V+ LC+ AK++
Sbjct: 270 IVTYNTLISAYSSKG-LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 166 LEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNG 225
EM+ G P + + ++ CK G++ + ++ + SR + PD+ ++ + S ++
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 226 GEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEY 285
G ++ A K+ + VIY LI+GYC+ A+ L EM + G ++V Y
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 286 DKLIQSLCLKAMDWETAEKLHAELKENGLY 315
+ ++ LC + M E A+KL E+ E L+
Sbjct: 449 NTILHGLCKRKMLGE-ADKLFNEMTERALF 477
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 3/294 (1%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTY-YLTIEALYRRSAFDWALPVC 59
+Y N ++ K GK + A EVF + P+S TY L +EA + + V
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE-KVF 363
Query: 60 QKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
M +P+ ++ + L +A + + E G P L+ ++
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ +A+ + E+ + + ++ LC+ K +G A +L EM P +
Sbjct: 424 G-MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+I G+CK G ++ A+E+ + ++ + +R DV TY + G+ G+++ A++I +
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
K + TP+ Y L+ C EA ++ EM ++ V + +I+ C
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 137/344 (39%), Gaps = 45/344 (13%)
Query: 11 FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPE 70
F++ G AL F + P++ Y + I+ R+ A+ + +ML +
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 71 WYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLV---AKLSQENETVPLAL 127
+ +L LCK K L EA ++ E +P + L+ KL A+
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN----AM 500
Query: 128 EVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLML--------------------- 166
E+ +++ R L + ++ +V D+ TAK++
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 167 --------------EMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
EMI+ P + N +I GYC++G ++ + S G PD
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI--YHSLIRGYCKMEQFDEAVKLL 270
+Y + G+ M A ++++ +++ L P + Y+S++ G+C+ Q EA +L
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 271 TEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+M E GV + Y +I + + A ++H E+ + G
Sbjct: 681 RKMIERGVNPDRSTYTCMINGF-VSQDNLTEAFRIHDEMLQRGF 723
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 126/297 (42%), Gaps = 11/297 (3%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ ++S G + A E+ P +TY I L + ++ A V +ML
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN--ET 122
+ P+ + LL+ CK + E V+ P + + +++ ++ +
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 123 VPLALEVLKE---IPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ +KE IP + + +++ CR + A L EM+ G
Sbjct: 394 ALMYFNSVKEAGLIPDN------VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N ++ G CK + +A ++ + R L PD YT ++ G+ G ++ A ++ ++ K
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+K L V Y++L+ G+ K+ D A ++ +M + Y L+ +LC K
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 104/242 (42%), Gaps = 3/242 (1%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
Y L L+ KLG + A+E+F+K + + + TY ++ + D A +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M+ +P S L+ LC L EA V+ I P + N ++ +
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD--GPPPGNAV 179
L+++ + + ++ R +++ A L+ +M + G P
Sbjct: 601 ASD-GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N ++ G+C+ +M++A +++ + RG+ PD TY + +G+ + + A +I +E
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 240 KK 241
++
Sbjct: 720 QR 721
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 83/209 (39%), Gaps = 3/209 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F K+G A E++ + P +Y + + AL + A V +M+
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P ++ C+ + + + I G P N L+ +E E +
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE-ENMS 637
Query: 125 LALEVLKEIPGDRRELAKKRFP--AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
A ++K++ ++ L F +++ CR + A+ ++ +MI G P + +
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPD 211
+I G+ + +A + + RG PD
Sbjct: 698 MINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F ++R + + + A + + + G N +I + G +E A + + +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G+ +VYT ++ + G+ME L + ++K V Y++LI Y +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT-RAL 323
EA +L+ M G V Y+ +I LC K +E A+++ AE+ +GL T R+L
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLC-KHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 324 I 324
+
Sbjct: 347 L 347
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 124/264 (46%), Gaps = 1/264 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ ++G+ + A + ++ C+P++ TY + I+AL R D A + +M+
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P ++ L+ LC+ K++EA+ V + ++ +P + N L+ ++ VP A
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP-A 390
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
E+L + + + F ++ LCRV A L+ M+ +G P +N +I G
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
C+ G M A +++ + + PD T+ I + + G+ + A L +K L
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLL 270
V +LI G CK+ + +A+ +L
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFIL 534
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 127/310 (40%), Gaps = 36/310 (11%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
+ L+ S +KL G A + + E Y + AL + + A K+L
Sbjct: 164 SSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILK 223
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+ + + LL+ C+G L++A V+ +S+E P
Sbjct: 224 IGFVLDSHIGTSLLLGFCRGLNLRDALKVFDV-------------------MSKEVTCAP 264
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
++ + ++ LC V + A L +M G P + +I
Sbjct: 265 NSVS----------------YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
C G +++A + + RG +P+V+TY V+ G G++E A + + K
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
+ + Y++LI GYCK + A +LLT M++ + NV +++L++ LC ++
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 305 LHAELKENGL 314
L L +NGL
Sbjct: 429 LKRML-DNGL 437
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 137/334 (41%), Gaps = 34/334 (10%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ + K G+ A E+ E C+PN T+ +E L R A+ + ++MLD
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAA----IELGKYPPMPYINFLVAKLSQEN 120
P+ S L+ LC+ + A+ + + IE IN + +
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 121 ETVPLALEVLKEIPGDRR----------ELAKKRFPA-VVRALCRVKDVGTAKQL--MLE 167
+ L L + K I D ++ K R ++ L +++ + T L +L+
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 168 MIADGPP-----------------PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRP 210
M++ G P + ++ G ++G++ + +++L++ G P
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 211 DVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLL 270
+VY Y +I +G G +E A K+L + V Y +++GY + D A++ +
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 271 TEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
M E G +N Y L+Q L + +E+
Sbjct: 675 RAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 144/321 (44%), Gaps = 19/321 (5%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ S + G+ AL+V + + P+ TY I L+ + + + M
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN-- 120
+ P+ + L+ K +L EA Y I+ P + N L+ L
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFP------AVVRALCRVKDVGTAKQLMLEMIADGPP 174
+ L VL ++K FP ++ C+ K V +++ M DG
Sbjct: 306 DEAKKVLNVL---------VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
+N + GYC+AG+ A +++ + S G+ PD+YT+ ++ G + G++ A
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 235 LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
LE+ +K +V+ + Y+ +I+G CK ++ ++A L + GV +V Y ++ L
Sbjct: 417 LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
Query: 295 KAMDWETAEKLHAEL-KENGL 314
K + W A +L+ ++ KE+GL
Sbjct: 477 KRL-WREAHELYRKMQKEDGL 496
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 2/269 (0%)
Query: 52 FDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINF 111
F+ AL + M ++ +P LL+ + K K + ++++ LG +
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 112 LVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD 171
L+ + + LAL L ++ E + F ++V C V A L+ +++
Sbjct: 120 LIDCFCR-CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P ++N +I C+ G++ A++++K ++ G+RPDV TY + + + G +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+IL + + + + +LI Y K Q EA K EM + V N+ Y+ LI
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 292 LCLKAMDWETAEKLHAELKENGLYLKGAT 320
LC+ + + A+K+ L G + T
Sbjct: 299 LCIHGL-LDEAKKVLNVLVSKGFFPNAVT 326
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 118/308 (38%), Gaps = 37/308 (12%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + +KL K +A + +F E+ + +++ I+ R + AL KM+
Sbjct: 85 LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG 144
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + G L+ C + EA ++ + LG P + N
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN---------------- 188
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++ +LC V TA ++ M G P +N +IT
Sbjct: 189 --------------------TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+G + ++ + G+ PDV T++ + Y G++ A+K E ++
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
V Y+SLI G C DEA K+L + G N Y+ LI C KA + K+
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC-KAKRVDDGMKIL 347
Query: 307 AELKENGL 314
+ +G+
Sbjct: 348 CVMSRDGV 355
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 9/289 (3%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ ++ K GK E++++ +CE N+ T+ + I L + D AL + ++
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 65 ARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLV---AKLSQEN 120
R P + G L+ L K +L EA +++ ++ G P N L+ K + +
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
L ++KE G R +L K + +V LC V V E+ G P +
Sbjct: 944 AACALFKRMVKE--GVRPDL--KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 181 NFVITGYCKAGEMEQAVEMMKLLE-SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
N +I G K+ +E+A+ + ++ SRG+ PD+YTY + G +E A KI E +
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
+ +++LIRGY + + A + M G N Y++L
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 147/330 (44%), Gaps = 41/330 (12%)
Query: 19 AALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLL 78
+ + + ++ E +PN +T+ + I L R + A + ++M D P+ + L+
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 79 VWLCKGKKLKEAHAVYKAAIELGKYPP--MPYINFLVAKLSQENETVPLALEVLKEIPGD 136
LC +KL A V++ ++ G++ P + YI L+ + S +N + + E+ D
Sbjct: 301 DALCTARKLDCAKEVFEK-MKTGRHKPDRVTYIT-LLDRFS-DNRDLDSVKQFWSEMEKD 357
Query: 137 RRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQA 196
F +V ALC+ + G A + M G P +N +I G + ++ A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 197 VEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK-------------HS 243
+E+ +ES G++P YTY V Y G+ +A + E+ K K +S
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477
Query: 244 V--------------------LTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
+ L P V Y+ +++ Y K+ + DEA+KLL+EM E G +
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 282 VDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
V + LI +L KA + A K+ +KE
Sbjct: 538 VIVVNSLINTL-YKADRVDEAWKMFMRMKE 566
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 142/314 (45%), Gaps = 10/314 (3%)
Query: 19 AALEVFEKF-EVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDL 77
A +FEKF + +P TY L I L + A V ++ IP+ + L
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826
Query: 78 LVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDR 137
L K K+ E +YK N +++ L + V AL++ ++ DR
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN-VDDALDLYYDLMSDR 885
Query: 138 R-ELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQA 196
+ ++ L + + AKQL M+ G P A++N +I G+ KAGE + A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 197 VEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTP--VIYHSLI 254
+ K + G+RPD+ TY+V+ G ++ +E K+ S L P V Y+ +I
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE--SGLNPDVVCYNLII 1003
Query: 255 RGYCKMEQFDEAVKLLTEMKEF-GVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
G K + +EA+ L EMK G+ ++ Y+ LI +L + M E A K++ E++ G
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM-VEEAGKIYNEIQRAG 1062
Query: 314 LYLKGAT-RALIRA 326
L T ALIR
Sbjct: 1063 LEPNVFTFNALIRG 1076
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 129/292 (44%), Gaps = 2/292 (0%)
Query: 23 VFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLC 82
VF+ + + ++ TY ++L + A +KM + + YS L+ L
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAK 142
K + EA VY+ I G P + + L+ L + + + + +LKE+ +
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD-IDSVMGLLKEMETLGLKPNV 258
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
F +R L R + A +++ M +G P + +I C A +++ A E+ +
Sbjct: 259 YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK 318
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+++ +PD TY + +S+ ++++ ++ E +K V V + L+ CK
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
F EA L M++ G+ N+ Y+ LI L L+ + A +L ++ G+
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGL-LRVHRLDDALELFGNMESLGV 429
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 148/420 (35%), Gaps = 114/420 (27%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ K GK + A+E+FE C PN+ T+ + L + AL + KM+D
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP-------MPYI-------- 109
+P+ ++ ++ L K ++KEA + +L YP +P +
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIED 695
Query: 110 ------NFLVAKLSQENETV--PLALEVLKEIPGDRRELAKKRFPA-------------V 148
NFL Q L +L E D +R A +
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 149 VRALCRVKDVGTAKQL----------------------------MLEMIAD--------G 172
+R C+ +V A+ L M+E+ D G
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 173 PPPGNAVFNFVITGYCKAGEMEQAVEMMK------------------------------- 201
P A +NF++ Y K+G++++ E+ K
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 202 -----LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRG 256
L+ R P TY + G S G + A+++ E IY+ LI G
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 257 YCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH--AELKENGL 314
+ K + D A L M + GVR ++ Y L+ LC M E LH ELKE+GL
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC---MVGRVDEGLHYFKELKESGL 992
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 120/292 (41%), Gaps = 36/292 (12%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N L+ ++ + ALE+F E +P ++TY + I+ + AL +
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
KM P + L L K + +EA ++ ++G P N +
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM-------- 509
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
++ +V ++ A +L+ EM+ +G P V
Sbjct: 510 ----------------------------MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I KA +++A +M ++ L+P V TY + +G G+++ A ++ E +
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
K + +++L CK ++ A+K+L +M + G +V Y+ +I L
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 3/261 (1%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P+ T+ + ++AL + F A M D +P ++ L+ L + +L +A +
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 94 YKAAIELGKYPPM-PYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+ LG P YI F + + ++V ALE +++ A + +L
Sbjct: 421 FGNMESLGVKPTAYTYIVF-IDYYGKSGDSVS-ALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
+ AKQ+ + G P + +N ++ Y K GE+++A++++ + G PDV
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
+ + ++ A K+ K+ T V Y++L+ G K + EA++L
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 273 MKEFGVRVNVDEYDKLIQSLC 293
M + G N ++ L LC
Sbjct: 599 MVQKGCPPNTITFNTLFDCLC 619
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 41/270 (15%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++S +K G+ + A ++F + P+S TY + ++ + D A+ + +M++
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P+ V L+ L K ++ EA ++ E+ P + N L+A L + +
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK--- 588
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
+ A +L M+ G PP FN +
Sbjct: 589 ---------------------------------IQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
CK E+ A++M+ + G PDV+TY I G G+++ A + KK +
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK---L 672
Query: 245 LTP--VIYHSLIRGYCKMEQFDEAVKLLTE 272
+ P V +L+ G K ++A K++T
Sbjct: 673 VYPDFVTLCTLLPGVVKASLIEDAYKIITN 702
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 13/289 (4%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ F K +++VF++ +PN +Y I L A+ + KM+
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLV---AKLSQEN 120
A P + L+ CK LKEA ++ + G P N L+ KL + +
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 121 ETVPLALEVLKE--IPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+ L E+ +E +P + ++ LCR ++ AK+L ++ + G P
Sbjct: 419 DGFALKEEMEREGIVPD------VGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDL-V 471
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
F+ ++ GYC+ GE +A ++K + GL+P TY ++ GY G ++AA + +
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 239 KKKHSVLTPVI-YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYD 286
+K+ + V Y+ L++GY + + ++A LL EM E G+ N Y+
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 40/285 (14%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCK---GKKLKE 89
+PN FT+ + I AL + + A V + M P S L+ CK K+ +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 90 AHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVV 149
A AV K +E P + N L+ ++ + +P +++V KE
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKD-DNLPGSMKVFKE----------------- 321
Query: 150 RALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLR 209
M+ P +N +I G C G++ +A+ M + S G++
Sbjct: 322 ------------------MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 210 PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
P++ TY + +G+ ++ A + K + +V T +Y+ LI YCK+ + D+ L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 270 LTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
EM+ G+ +V Y+ LI LC + E A+KL +L GL
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNG-NIEAAKKLFDQLTSKGL 467
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 96/215 (44%), Gaps = 3/215 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F K K AL++F + P + Y + I+A + D + ++M
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+P+ + L+ LC+ ++ A ++ G P + + L+ ++ E+
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRK 488
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN-AVFNFV 183
A+ +LKE+ + + V++ C+ ++ A + +M + N A +N +
Sbjct: 489 AAM-LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVI 218
+ GY + G++E A ++ + +GL P+ TY ++
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 142/317 (44%), Gaps = 12/317 (3%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N ++ F G+ A + + P+ T+ I A + A +C
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+ML P+ + ++ CK + +A K +L P + N ++ +
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRA- 445
Query: 121 ETVPLALEVLKEIPGDRRELAKKR--FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+ V +++L+EI RR L + ++ C V ++ A+ L EMI+ G P
Sbjct: 446 KRVDEGMQLLREIS--RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
N ++ G+C+ ++E+A+E+ ++++ + D Y +I G G +++ A + +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC-S 562
Query: 239 KKKHSVLTPV-IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
H V V Y+ +I G+C +A L +MK+ G + Y+ LI+ CLKA
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG-CLKAG 621
Query: 298 DWETAEKLHAELKENGL 314
+ + + +L +E++ NG
Sbjct: 622 EIDKSIELISEMRSNGF 638
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 140/351 (39%), Gaps = 32/351 (9%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
+V K+G K+AL + K E +P+ Y I+ L + A + +ML+
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN------ 120
P ++ ++ C + +A + + IE P + N L++ +E
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 121 -------------ETVPLALEVLKEIPGDRRELAKK-----------RFPAVVRALCRVK 156
+TV + +R + AK F ++ CR K
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 157 DVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYA 216
V QL+ E+ G +N +I G+C+ + A ++ + + S G+ PD T
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 217 VIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEF 276
++ G+ ++E A ++ E + L V Y+ +I G CK + DEA L +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 277 GVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT-RALIRA 326
GV +V Y+ +I C K+ A L ++K+NG +T LIR
Sbjct: 567 GVEPDVQTYNVMISGFCGKSA-ISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 149/378 (39%), Gaps = 55/378 (14%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ F ++ + A+ ++ K E+ + N +++ + I+ ++L K+
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVY---------------KAAIELGKYPPMPYI 109
P+ + LL LC ++ EA A++ +E+G P +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 110 NFLVAKLSQENETVPLALEVLKEIP--------------------GDRRE----LAKKR- 144
N L+ L E + A V K + GD + L+K
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 145 ---------FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQ 195
+ A++ LC+ A+ L EM+ G P +N +I G+C G
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
A +++ + R + PDV T+ + S G++ A K+ +E + V Y+S+I
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLY 315
G+CK +FD+A + M +V ++ +I C +A + +L E+ GL
Sbjct: 410 GFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYC-RAKRVDEGMQLLREISRRGLV 464
Query: 316 LKGAT-RALIRAVKEMEN 332
T LI E++N
Sbjct: 465 ANTTTYNTLIHGFCEVDN 482
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 35 NSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVY 94
N+ TY I + A + Q+M+ P+ + LL C+ +KL+EA ++
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 95 KAAIELGK--YPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+ I++ K + Y N ++ + + ++ V A ++ +P E + + ++
Sbjct: 526 EV-IQMSKIDLDTVAY-NIIIHGMCKGSK-VDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
C + A L +M +G P N+ +N +I G KAGE+++++E++ + S G D
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 213 YTYAVIASGYSNG 225
+T ++A ++G
Sbjct: 643 FTIKMVADLITDG 655
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 2/298 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSA-FDWALPVC 59
+Y + L+ ++ + G + A+ VF + + PN TY I+A + F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 60 QKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
+M P+ + LL +G + A ++ + N L+ + +
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ + LA E+L ++P R + V+ + A L EM G
Sbjct: 388 GQ-MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N +++ Y K G E+A+++++ + S G++ DV TY + GY G+ + +K+ E K
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
++H + + Y +LI GY K + EA+++ E K G+R +V Y LI +LC +
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 121/268 (45%), Gaps = 11/268 (4%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ S+ G +AA +F++ + E + F+Y ++A+ + D A + +M
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVA---KLSQEN 120
R +P S ++ K + EA ++ LG N L++ K+ +
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 121 ETVPLALEVLKEIP--GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
E AL++L+E+ G ++++ + A++ + K++ EM + P
Sbjct: 462 E----ALDILREMASVGIKKDVVT--YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLL 515
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
++ +I GY K G ++A+E+ + +S GLR DV Y+ + G + +A +++E
Sbjct: 516 TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
K+ V Y+S+I + + D +
Sbjct: 576 TKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 137 RRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF--VITGYCKAGEME 194
R+ K A++ L R V AK++ A G GN V+ F +I+ Y ++G E
Sbjct: 228 RKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGY--GNTVYAFSALISAYGRSGLHE 285
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGG-EMEAARKILEEAKKKHSVLTPVIYHSL 253
+A+ + ++ GLRP++ TY + GG E + K +E ++ + ++SL
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ + ++ A L EM + +V Y+ L+ ++C
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 24/323 (7%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ K ALEVF E ++ TY I L + A + + M
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+ + P L+ K L EA +YK I P + N L+
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF------ 299
Query: 123 VPLALEVLKEIPGDRREL-----AKKRFPAVVR------ALCRVKDVGTAKQLMLEMIAD 171
+ GD + + +K FP VV C+ K V +L EM
Sbjct: 300 ------CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G +N +I GYC+AG++ A ++ + G+ PD+ TY ++ N G++E A
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
++E+ +K + + Y+ +I+G C+ ++ EA L + GV+ + Y +I
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Query: 292 LCLKAMDWETAEKLHAELKENGL 314
LC K + E A+KL +KE+G
Sbjct: 474 LCRKGLQRE-ADKLCRRMKEDGF 495
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 36/317 (11%)
Query: 12 SKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEW 71
+K+ K + ++ K E + +++ + I R S AL + KM+ P
Sbjct: 90 AKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSI 149
Query: 72 YSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL- 130
++G LL C+G + +EA ++ + G P + N ++ L + N + ALEV
Sbjct: 150 VTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK-NRDLNNALEVFY 208
Query: 131 ----KEIPGDR-----------------------RELAKKR-------FPAVVRALCRVK 156
K I D R++ K++ F A++ +
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 157 DVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYA 216
++ A+ L EMI P +N +I G+C G + A M L+ S+G PDV TY
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 217 VIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEF 276
+ +G+ +E K+ E + V Y++LI GYC+ + + A K+ M +
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 277 GVRVNVDEYDKLIQSLC 293
GV ++ Y+ L+ LC
Sbjct: 389 GVSPDIVTYNILLDCLC 405
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 99/246 (40%), Gaps = 3/246 (1%)
Query: 52 FDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINF 111
FD A + +ML +R IP +L + K K +Y LG +
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 112 LVAKLSQENETVPLALEVLKEIP-GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIA 170
L+ + + + K + G R + +++ C+ A L+ M
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVT--LGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 171 DGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEA 230
G P ++N VI G CK ++ A+E+ +E +G+R D TY + SG SN G
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 231 ARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
A ++L + K+ + + +LI + K EA L EM V NV Y+ LI
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 291 SLCLKA 296
C+
Sbjct: 298 GFCIHG 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 119/286 (41%), Gaps = 1/286 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ S G+ A + + +PN + I+ + A + ++M+
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+P ++ L+ C L +A ++ + G +P + N L+ + ++ V
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK-SKRVE 341
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
+++ E+ + ++ C+ + A+++ M+ G P +N ++
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
C G++E+A+ M++ L+ + D+ TY +I G +++ A + +K
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
+ Y ++I G C+ EA KL MKE G + YD+ ++
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 1/215 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N L+ F G A +F+ C P+ TY I + + + +
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M + + ++ L+ C+ KL A V+ ++ G P + N L+ L N
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN-N 407
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ AL +++++ ++ + +++ LCR + A L + G P +
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTY 215
+I+G C+ G +A ++ + ++ G P Y
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 161 AKQLMLEMIA-DGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIA 219
A +L +MI+ +G P FN +I G+C+AGE+E+A +++ ++ G P+VY Y+ +
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 220 SGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVR 279
+G+ G+++ A++ +E KK L V Y +L+ +C+ + DEA+KLL EMK R
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 280 VNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYL-KGATRALIRAV 327
+ Y+ +++ L + E + L + G++L KG+ R ++ A+
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQML-DQWGSEGVHLNKGSYRIILNAL 418
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F ++ CR +V AK+++ M +G P ++ ++ G+CK G++++A + ++
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
GL+ D Y + + + GE + A K+L E K + Y+ ++RG + +
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT 320
EA+++L + GV +N Y ++ +LC + E A K + + E G++ AT
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNG-ELEKAVKFLSVMSERGIWPHHAT 445
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKM-LDARSIPEWYSVGDLLVWLCKGKKLKEAH 91
+PN+ + + ++ + ++A V ++M S P + L+ L + KEA
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 92 AVYKAAIELGKYPPMPY-INFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVR 150
+++ I P P N ++ + E V A ++L + + + A++
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGE-VERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 151 ALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRP 210
C+V + AKQ E+ G + ++ +C+ GE ++A++++ +++ R
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 211 DVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLL 270
D TY VI G S+ G E A ++L++ + L Y ++ C + ++AVK L
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 271 TEMKEFGVRVNVDEYDKLIQSLC 293
+ M E G+ + +++L+ LC
Sbjct: 432 SVMSERGIWPHHATWNELVVRLC 454
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 39/192 (20%)
Query: 157 DVGTAKQLMLEMIAD-GPPPGNAVFNFVITGYCKAGEM---------------------- 193
+V +++L+L + G P +FN ++ +CK G++
Sbjct: 175 EVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSIT 234
Query: 194 --------------EQAVEMMK-LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
++AVE+ + ++ G+ PD T+ V+ +G+ GE+E A+KIL+
Sbjct: 235 YSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFM 294
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
KK Y +L+ G+CK+ + EA + E+K+ G++++ Y L+ C + +
Sbjct: 295 KKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC-RNGE 353
Query: 299 WETAEKLHAELK 310
+ A KL E+K
Sbjct: 354 TDEAMKLLGEMK 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 120/293 (40%), Gaps = 3/293 (1%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCE-PNSFTYYLTIEALYRRSAFDWALPVCQK 61
I N LV K G A V E+ + PNS TY ++ L+ S A+ + +
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 62 MLDARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
M+ I P+ + ++ C+ +++ A + + G P + + L+ +
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ + A + E+ +L + ++ CR + A +L+ EM A +
Sbjct: 318 K-IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTY 376
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N ++ G G E+A++M+ S G+ + +Y +I + GE+E A K L +
Sbjct: 377 NVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSE 436
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ ++ L+ C+ + V++L G+ + +++S+C
Sbjct: 437 RGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 3/300 (1%)
Query: 15 GKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSV 74
+G+A+ EV + + P+S +Y + I + A +M+ +P +Y+
Sbjct: 307 NEGRAS-EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTY 365
Query: 75 GDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIP 134
L+ L K++ A + + E G N L+ Q + A + E+
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK-AFALHDEMM 424
Query: 135 GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEME 194
D + + + +++ LCR A +L +++ G P + N ++ G+C G M+
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI 254
+A ++K ++ + PD TY + G G+ E AR+++ E K++ + Y++LI
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 255 RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
GY K A + EM G + Y+ L++ L K + E AE+L E+K G+
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS-KNQEGELAEELLREMKSEGI 603
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 127/322 (39%), Gaps = 33/322 (10%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N ++ K GK K A EVF +P TY ++ R + A +
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIIS 284
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKE------------------------------- 89
+M P+ + +L W+C + E
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLE 344
Query: 90 -AHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAV 148
A A ++ G P N L+ L EN+ + A +++EI L + +
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK-IEAAEILIREIREKGIVLDSVTYNIL 403
Query: 149 VRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL 208
+ C+ D A L EM+ DG P + +I C+ + +A E+ + + +G+
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVK 268
+PD+ + G+ G M+ A +L+E V Y+ L+RG C +F+EA +
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 269 LLTEMKEFGVRVNVDEYDKLIQ 290
L+ EMK G++ + Y+ LI
Sbjct: 524 LMGEMKRRGIKPDHISYNTLIS 545
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 125/259 (48%), Gaps = 1/259 (0%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P +TY I L+ + + A + +++ + + + + L+ C+ K+A A+
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 94 YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALC 153
+ + G P L+ L ++N+T A E+ +++ G + ++ C
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE-ADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVY 213
+ ++ A L+ EM P + +N ++ G C G+ E+A E+M ++ RG++PD
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 214 TYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
+Y + SGYS G+ + A + +E T + Y++L++G K ++ + A +LL EM
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Query: 274 KEFGVRVNVDEYDKLIQSL 292
K G+ N + +I+++
Sbjct: 599 KSEGIVPNDSSFCSVIEAM 617
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 72 YSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLK 131
Y+ ++ LCK KLK+A G P + N LV S + A ++
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR-IEGARLIIS 284
Query: 132 EIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAG 191
E+ + + + ++ +C + G A +++ EM G P + +N +I G G
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
++E A + +G+ P YTY + G ++EAA ++ E ++K VL V Y+
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAE 303
LI GYC+ +A L EM G++ Y LI LC K E E
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 1/227 (0%)
Query: 35 NSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVY 94
+S TY + I + A + +M+ P ++ L+ LC+ K +EA ++
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 95 KAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCR 154
+ + G P + +N L+ + A +LKE+ + ++R LC
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIG-NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCG 514
Query: 155 VKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYT 214
A++LM EM G P + +N +I+GY K G+ + A + + S G P + T
Sbjct: 515 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT 574
Query: 215 YAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKME 261
Y + G S E E A ++L E K + V + S+I ++
Sbjct: 575 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 2/310 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ + K G+ A + ++ N ++ I L FD AL +ML
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P + L+ LCK K +A ++ + G N L+ L + + +
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK-LD 522
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A + KEI G + + + ++ C K + A + EM+ G P N ++ +I
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G ++E+A++ + G+ PDVYTY+V+ G E ++ +E K+
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
V+Y+ LIR YC+ + A++L +MK G+ N Y LI+ + + + E A+
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS-RVEEAKL 701
Query: 305 LHAELKENGL 314
L E++ GL
Sbjct: 702 LFEEMRMEGL 711
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 4/258 (1%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
+P+++TY + I L+ + + A+ +P+ Y+ ++ CK ++ +E
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+ + P N L+ + + +ALE+ +++ + ++++ +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGR-LSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
+ V AK L EM +G P + +I GY K G+M + +++ + S+ + P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
TY V+ GY+ G + A ++L E ++K V + Y I GY K EA K E
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Query: 273 MKEFGVRVNVDEYDKLIQ 290
+ ++ ++KLIQ
Sbjct: 811 ENYAAI---IEGWNKLIQ 825
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 126/295 (42%), Gaps = 1/295 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y+ + +F K GK + A+++F K E PN T+ I+ L +D A +
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
KM++ P + L+ L + K++ +A+ V K + G P + N L+ E
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI-EA 378
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
++ A+E+ + L + +++ C+ A++L+ EM++ G F
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
VI C + A+ + + R + P + SG G+ A ++ +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
K V+ ++L+ G C+ + DEA ++ E+ G ++ Y+ LI C K
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 125/322 (38%), Gaps = 36/322 (11%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+L L+ K GK ALE++ +F ++ T + L D A + +++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
L + + S L+ C KKL EA ++ G P + L+ L N+
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK- 590
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
V A++ + + + ++ C+ + ++ EM++ P V+N
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 183 VITGYCKAGEMEQAVEMMKLLESRG----------------------------------- 207
+I YC++G + A+E+ + ++ +G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
L P+V+ Y + GY G+M +L E K+ + Y +I GY + EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 268 KLLTEMKEFGVRVNVDEYDKLI 289
+LL EM+E G+ + Y + I
Sbjct: 771 RLLNEMREKGIVPDSITYKEFI 792
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 97/247 (39%), Gaps = 44/247 (17%)
Query: 101 GKYPPMPYINFLVAKLSQENETVPL--ALEVL-KEIPGDRRELAKKRFPAVVRALCRVKD 157
G +P N L+ L + NE A +V+ K + D F + A C+
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPD-----VYLFTTAINAFCKGGK 275
Query: 158 VGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAV 217
V A +L +M G P FN VI G G ++A + + RG+ P + TY++
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 218 IASGYSNGGEMEAARKILEEAKKKHS---------------------------------- 243
+ G + + A +L+E KK
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 244 -VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
LT Y++LI+GYCK Q D A +LL EM G VN + +I LC M +++A
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM-FDSA 454
Query: 303 EKLHAEL 309
+ E+
Sbjct: 455 LRFVGEM 461
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 2/310 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ + K G+ A + ++ N ++ I L FD AL +ML
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P + L+ LCK K +A ++ + G N L+ L + + +
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK-LD 522
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A + KEI G + + + ++ C K + A + EM+ G P N ++ +I
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G ++E+A++ + G+ PDVYTY+V+ G E ++ +E K+
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
V+Y+ LIR YC+ + A++L +MK G+ N Y LI+ + + + E A+
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS-RVEEAKL 701
Query: 305 LHAELKENGL 314
L E++ GL
Sbjct: 702 LFEEMRMEGL 711
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 4/258 (1%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
+P+++TY + I L+ + + A+ +P+ Y+ ++ CK ++ +E
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+ + P N L+ + + +ALE+ +++ + ++++ +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGR-LSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
+ V AK L EM +G P + +I GY K G+M + +++ + S+ + P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
TY V+ GY+ G + A ++L E ++K V + Y I GY K EA K E
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Query: 273 MKEFGVRVNVDEYDKLIQ 290
+ ++ ++KLIQ
Sbjct: 811 ENYAAI---IEGWNKLIQ 825
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 126/295 (42%), Gaps = 1/295 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y+ + +F K GK + A+++F K E PN T+ I+ L +D A +
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
KM++ P + L+ L + K++ +A+ V K + G P + N L+ E
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI-EA 378
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
++ A+E+ + L + +++ C+ A++L+ EM++ G F
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
VI C + A+ + + R + P + SG G+ A ++ +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
K V+ ++L+ G C+ + DEA ++ E+ G ++ Y+ LI C K
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 125/322 (38%), Gaps = 36/322 (11%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+L L+ K GK ALE++ +F ++ T + L D A + +++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
L + + S L+ C KKL EA ++ G P + L+ L N+
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK- 590
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
V A++ + + + ++ C+ + ++ EM++ P V+N
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 183 VITGYCKAGEMEQAVEMMKLLESRG----------------------------------- 207
+I YC++G + A+E+ + ++ +G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
L P+V+ Y + GY G+M +L E K+ + Y +I GY + EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 268 KLLTEMKEFGVRVNVDEYDKLI 289
+LL EM+E G+ + Y + I
Sbjct: 771 RLLNEMREKGIVPDSITYKEFI 792
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 97/247 (39%), Gaps = 44/247 (17%)
Query: 101 GKYPPMPYINFLVAKLSQENETVPL--ALEVL-KEIPGDRRELAKKRFPAVVRALCRVKD 157
G +P N L+ L + NE A +V+ K + D F + A C+
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPD-----VYLFTTAINAFCKGGK 275
Query: 158 VGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAV 217
V A +L +M G P FN VI G G ++A + + RG+ P + TY++
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 218 IASGYSNGGEMEAARKILEEAKKKHS---------------------------------- 243
+ G + + A +L+E KK
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 244 -VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
LT Y++LI+GYCK Q D A +LL EM G VN + +I LC M +++A
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM-FDSA 454
Query: 303 EKLHAEL 309
+ E+
Sbjct: 455 LRFVGEM 461
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 135/332 (40%), Gaps = 39/332 (11%)
Query: 19 AALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSV---- 74
+AL +F+K E PNS T+ + IE + + AL +KM P + V
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416
Query: 75 ------------------------------GDLLVWLCKGKKLKEAHAVYKAAIELGKYP 104
+L WLCK K EA + G P
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 105 P-MPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQ 163
+ Y N ++ Q+N + LA V I + + ++ R D A +
Sbjct: 477 NVVSYNNVMLGHCRQKN--MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 164 LMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMM-KLLESRGLRPDVYTYAVIASGY 222
++ M + V+ +I G CK G+ +A E++ ++E + L +Y I G+
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 223 SNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNV 282
GEM++A EE + Y SL+ G CK + D+A+++ EMK GV++++
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 283 DEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
Y LI C K + E+A L +EL E GL
Sbjct: 655 PAYGALIDGFC-KRSNMESASALFSELLEEGL 685
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 134/304 (44%), Gaps = 3/304 (0%)
Query: 18 KAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSI-PEWYSVGD 76
+ ALEV E N Y I L + A + M++ + + S
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 77 LLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGD 136
++ K ++ A A Y+ G P + L+ L + N + ALE+ E+
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR-MDQALEMRDEMKNK 648
Query: 137 RRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQA 196
+L + A++ C+ ++ +A L E++ +G P ++N +I+G+ G M A
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 197 VEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRG 256
+++ K + GLR D+ TY + G G + A ++ E + V +IY ++ G
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG 768
Query: 257 YCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYL 316
K QF + VK+ EMK+ V NV Y+ +I + + + A +LH E+ + G+
Sbjct: 769 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG-HYREGNLDEAFRLHDEMLDKGILP 827
Query: 317 KGAT 320
GAT
Sbjct: 828 DGAT 831
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 117/286 (40%), Gaps = 36/286 (12%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ F K G+ +A+ +E+ PN TY + L + + D AL + +M +
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+ + G L+ CK ++ A A++ +E G P P N
Sbjct: 648 KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN-------------- 693
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
+++ + ++ A L +M+ DG + +I
Sbjct: 694 ----------------------SLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G K G + A E+ +++ GL PD Y VI +G S G+ K+ EE KK +
Sbjct: 732 DGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
+IY+++I G+ + DEA +L EM + G+ + +D L+
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 138/306 (45%), Gaps = 39/306 (12%)
Query: 20 ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLV 79
ALEV + EP+S Y L ++A C K LD ++ + L+
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQA-------------CCKTLD-------LAMANSLL 291
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPM-PYINFLVAKLSQENETVPLALEVLKEIPGDRR 138
K KKL P Y + ++A + Q N + A+ + E+ D
Sbjct: 292 REMKEKKL--------------CVPSQETYTSVILASVKQGN--MDDAIRLKDEMLSDGI 335
Query: 139 ELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVE 198
+ +++ C+ D+ +A L +M +GP P + F+ +I + K GEME+A+E
Sbjct: 336 SMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALE 395
Query: 199 MMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYC 258
K +E GL P V+ I G+ G + E A K+ +E+ + + + ++++ C
Sbjct: 396 FYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET-GLANVFVCNTILSWLC 454
Query: 259 KMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKG 318
K + DEA +LL++M+ G+ NV Y+ ++ C + + + A + + + E GL
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC-RQKNMDLARIVFSNILEKGLKPNN 513
Query: 319 ATRALI 324
T +++
Sbjct: 514 YTYSIL 519
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
Query: 145 FPAVVR---ALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMK 201
FP V R AL + + AK+L M+A G N ++ + + +A+E++
Sbjct: 198 FPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLS 257
Query: 202 LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK-KKHSVLTPVIYHSLIRGYCKM 260
RG PD Y++ ++ A +L E K KK V + Y S+I K
Sbjct: 258 RAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317
Query: 261 EQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
D+A++L EM G+ +NV LI C K D +A L ++++ G
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHC-KNNDLVSALVLFDKMEKEG 369
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 91/215 (42%), Gaps = 2/215 (0%)
Query: 77 LLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGD 136
LL K ++ A + +EL P PY+N ++ L Q N ++ A E+ +
Sbjct: 169 LLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRN-SLTEAKELYSRMVAI 227
Query: 137 RRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQA 196
+ ++RA R + A +++ I G P + +++ + CK ++ A
Sbjct: 228 GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMA 287
Query: 197 VEMMKLLESRGL-RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
+++ ++ + L P TY + G M+ A ++ +E + V SLI
Sbjct: 288 NSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLIT 347
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
G+CK A+ L +M++ G N + LI+
Sbjct: 348 GHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 7/311 (2%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + +K+ K + EK E+ N +TY + I R S AL + KM+
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN---ETV 123
P+ ++ LL C G ++ +A A+ +E+G P L+ L N E V
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
L +++ G + +L + AVV LC+ D A L+ +M A +++ V
Sbjct: 204 ALIDRMVQR--GCQPDLVT--YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I CK + A+ + +E++G+RP+V TY+ + S N G A ++L + ++
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAE 303
V + +LI + K + +A KL EM + + N+ Y LI C+ E +
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 304 KLHAELKENGL 314
L ++++ L
Sbjct: 380 MLELMIRKDCL 390
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 147/316 (46%), Gaps = 10/316 (3%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
LN L+ F + A+ + ++ +P++ T+ I L+ + A+ + +M+
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV 210
Query: 64 DARSIPEWYSVGDLLVWLCKGKK----LKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
P+ + G ++ LCK L + + A IE I+ L K E
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL-CKYRHE 269
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
++ + L E+ E G R + + +++ LC A +L+ +MI P
Sbjct: 270 DDALNLFTEM--ENKGVRPNVIT--YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
F+ +I + K G++ +A ++ + + R + P+++TY+ + +G+ + A+++LE
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+K + V Y++LI G+CK ++ D+ ++L EM + G+ N Y LI +A D
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF-FQARDC 444
Query: 300 ETAEKLHAELKENGLY 315
+ A+ + ++ G++
Sbjct: 445 DNAQMVFKQMVSVGVH 460
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 131/294 (44%), Gaps = 2/294 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
+V K G AL + K E + E N Y I++L + D AL + +M +
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ LC + +A + IE P + + L+ ++ + V A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK-A 342
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++ +E+ + + +++ C + +G AKQ++ MI P +N +I G
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+CKA +++ +E+ + + RGL + TY + G+ + + A+ + ++
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+ Y+ L+ G CK + +A+ + ++ + ++ Y+ +I+ +C KA W+
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC-KAGKWK 515
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 1/278 (0%)
Query: 16 KGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVG 75
K A+ + ++ C+P+ TY + L +R D AL + KM A+
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 76 DLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPG 135
++ LCK + +A ++ G P + + L++ L A +L ++
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSD-ASRLLSDMIE 316
Query: 136 DRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQ 195
+ F A++ A + + A++L EMI P ++ +I G+C + +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
A +M++L+ + P+V TY + +G+ ++ ++ E ++ V V Y +LI
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
G+ + D A + +M GV N+ Y+ L+ LC
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 139/317 (43%), Gaps = 9/317 (2%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
++ N + F K GK AA + E EPN Y + A R D A + +
Sbjct: 450 FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYK----AAIELGKYPPMPYINFLVAKLS 117
ML+ P ++ L+ K K + A V + E + IN L K+
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL-CKVG 568
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
Q ++ + ++KE R ++ + +++ +V D +A + EM +G P
Sbjct: 569 QTSKAKEMLQNLIKE---KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNV 625
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
F +I G+CK+ M+ A+EM ++S L+ D+ Y + G+ +M+ A + E
Sbjct: 626 VTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSE 685
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
+ + +Y+SLI G+ + + D A+ L +M G+ ++ Y +I L LK
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGL-LKDG 744
Query: 298 DWETAEKLHAELKENGL 314
+ A L++EL + G+
Sbjct: 745 NINLASDLYSELLDLGI 761
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 3/309 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML-DA 65
L+ F K + A +V + E N Y I L + A + Q ++ +
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Query: 66 RSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPL 125
R S ++ K A Y+ E GK P + L+ + N + L
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR-MDL 643
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
ALE+ E+ +L + A++ C+ D+ TA L E+ G P +V+N +I+
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
G+ G+M+ A+++ K + + G+ D++TY + G G + A + E V
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
+++ L+ G K QF +A K+L EMK+ V NV Y +I + + A +L
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG-NLNEAFRL 822
Query: 306 HAELKENGL 314
H E+ E G+
Sbjct: 823 HDEMLEKGI 831
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 110/274 (40%), Gaps = 36/274 (13%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ F K+G +A+E + + PN T+ I + + D AL + +M
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+ + G L+ CK +K A+ ++ ELG P + N L++
Sbjct: 654 MELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF-------- 705
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
R L K + A L +M+ DG + +I
Sbjct: 706 -------------RNLGK---------------MDAAIDLYKKMVNDGISCDLFTYTTMI 737
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G K G + A ++ L G+ PD + V+ +G S G+ A K+LEE KKK
Sbjct: 738 DGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVT 797
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
++Y ++I G+ + +EA +L EM E G+
Sbjct: 798 PNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 147/365 (40%), Gaps = 74/365 (20%)
Query: 30 FQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKE 89
F+ P +F Y L A R D+A+ M+D + +P V ++L L + + E
Sbjct: 165 FELTPRAFNYLLN--AYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDE 222
Query: 90 AHAVYKAAIELG------------------KYP----------------PMPYINFLVAK 115
A +Y + +G + P P + L +
Sbjct: 223 AKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQ 282
Query: 116 LSQENETVPLALEVLKEIPGDRR-ELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPP 174
+ + + +AL++L+E+ G +++ + +V+ A + ++ A ++M EM+ G P
Sbjct: 283 AACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIP 342
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
++ GYCK E+ +A+++ +E GL PD ++V+ + EME A +
Sbjct: 343 MSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEF 402
Query: 235 LEEAKKKHSVLTPVIYHSLIRG----------------------------------YCKM 260
K + V+ H++I+G +CK
Sbjct: 403 YMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQ 462
Query: 261 EQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC-LKAMDWETAEKLHAELKENGLYLKGA 319
+ D A L M++ G+ NV Y+ ++ + C +K MD A + +E+ E GL
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDL--ARSIFSEMLEKGLEPNNF 520
Query: 320 TRALI 324
T +++
Sbjct: 521 TYSIL 525
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 2/272 (0%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P+ TY+ I+A + AL + ++M ++ +L LCK +KL EAH +
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 94 YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALC 153
+A + G L+ +E E V ALE+ E+ + F +++ LC
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFRE-EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVY 213
A + E+ G P ++ FN +I GYCK G +E+A E +PD Y
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY 592
Query: 214 TYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
T ++ +G G E A ++ V T V Y+++I +CK ++ EA LL+EM
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTLIEEREVDT-VTYNTMISAFCKDKKLKEAYDLLSEM 651
Query: 274 KEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
+E G+ + Y+ I L ET E L
Sbjct: 652 EEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 127/264 (48%), Gaps = 5/264 (1%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCK---GKKLKEA 90
P+ + + + A AL + QKM+ + P + LL+ L + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 91 HAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGD-RRELAKKRFPAVV 149
V+ +++G + N LV E + + AL +L+ + + + + ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGK-LEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 150 RALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLR 209
+A+ + + K+L+L+M +G P +N ++ GYCK G +++A ++++L++ +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 210 PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
PD+ TY ++ +G N G M ++++ K V Y++LI G ++ EA KL
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 270 LTEMKEFGVRVNVDEYDKLIQSLC 293
+ +M+ GV+ N ++ ++ LC
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLC 391
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 140/320 (43%), Gaps = 9/320 (2%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ + SK G+ E+ + PN TY + + + A + + M
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+P+ + L+ LC ++E + A L P + N L+ + +
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE----LG 359
Query: 125 LALE---VLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMI-ADGPPPGNAVF 180
L+LE +++++ D + + ++ LC+ + + + E++ G P +
Sbjct: 360 LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+ +I Y K G++ A+EMM+ + +G++ + T I +++ A +L A K
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+ ++ V Y +LI G+ + E+ ++A+++ EMK+ + V ++ LI LC
Sbjct: 480 RGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTEL 539
Query: 301 TAEKLHAELKENGLYLKGAT 320
EK EL E+GL +T
Sbjct: 540 AMEKFD-ELAESGLLPDDST 558
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 123/291 (42%), Gaps = 4/291 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N+LV+ + KLG K A ++ E + P+ TY + I L + L + M
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE--NET 122
+ P+ + L+ + EA + + G N + L +E E
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
V ++ L ++ G ++ + +++A +V D+ A ++M EM G N
Sbjct: 399 VTRKVKELVDMHGFSPDIVT--YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ CK ++++A ++ RG D TY + G+ ++E A ++ +E KK
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
T ++SLI G C + + A++ E+ E G+ + ++ +I C
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 23/190 (12%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADG------------------PPPGNAVFNFVITGYC 188
+VVR+L AK L++ I PPP A+F+ ++ Y
Sbjct: 83 SVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYL 142
Query: 189 KAGEMEQAVEMMKLLESRGLRPDVYTYAVIASG---YSNGGEMEAARKILEEAKKKHSVL 245
G+ A+++ + + L+P++ T + G Y + + +AR++ ++ K L
Sbjct: 143 HEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSL 202
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEM-KEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
++ L+ GYC + ++A+ +L M EF V + Y+ +++++ K + E
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262
Query: 305 LHAELKENGL 314
L ++K+NGL
Sbjct: 263 L-LDMKKNGL 271
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ F + K + ALE++++ + + P T+ I L + A+ ++ ++
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+P+ + +++ CK ++++A Y +I+ P N L+ L +E T A
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK-A 610
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
L + + RE+ + ++ A C+ K + A L+ EM G P +N I+
Sbjct: 611 LNFFNTLI-EEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 187 YCKAGEMEQAVEMMK 201
+ G++ + E++K
Sbjct: 670 LMEDGKLSETDELLK 684
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 20/292 (6%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y +V SF K G + A + F + C PN TY I A + +A + +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
ML +P + L+ CK ++++A +++ P + + K +N
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD----MYFKQYDDN 633
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
P + + A++ C+ V A++L+ M +G P V+
Sbjct: 634 SERPNVVT----------------YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+ +I G CK G++++A E+ + G +YTY+ + Y + A K+L + +
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
VIY +I G CK+ + DEA KL+ M+E G + NV Y +I
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 133/309 (43%), Gaps = 31/309 (10%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ ++ K K A E+FE C PN TY I+ + + A + ++M ++
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 67 SIPEW----------------YSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYIN 110
+P+ + G LL CK +++EA + A G P +
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 111 FLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALC-------RVKDVGTAKQ 163
L+ L + + L E + E+++ FPA + +VK A +
Sbjct: 679 ALIDGLCKVGK--------LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 164 LMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYS 223
++ +M+ + P ++ +I G CK G+ ++A ++M+++E +G +P+V TY + G+
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 224 NGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVD 283
G++E ++LE K V Y LI CK D A LL EMK+ +
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 284 EYDKLIQSL 292
Y K+I+
Sbjct: 851 GYRKVIEGF 859
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 116/300 (38%), Gaps = 13/300 (4%)
Query: 6 DLVFSFSKLGKG-------KAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPV 58
D VF ++KL G + A++ + C PN TY + + V
Sbjct: 301 DTVF-YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 59 CQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQ 118
M+ P L+ C A+ + K ++ G P N L+ +
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 119 ENETV-----PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGP 173
+ +++ LA + E+ L K + R LC A ++ EMI G
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 174 PPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARK 233
P + ++ V+ C A +ME A + + ++ GL DVYTY ++ + G +E ARK
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 234 ILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
E ++ V Y +LI Y K ++ A +L M G N+ Y LI C
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 47/331 (14%)
Query: 24 FEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSI----PEWYSVGDLLV 79
F++++ PN TY ++ + + A +K+LDA S+ P L+
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEA----RKLLDAMSMEGCEPNQIVYDALID 682
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRE 139
LCK KL EA V E G +P Y + + + LA +VL ++ +
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHG-FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 140 LAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEM 199
+ ++ LC+V A +LM M G P + +I G+ G++E +E+
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 200 MKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH----------------- 242
++ + S+G+ P+ TY V+ G ++ A +LEE K+ H
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861
Query: 243 ------SVLTPV----------IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVD--- 283
+L + +Y LI K ++ + A++LL E+ F + VD
Sbjct: 862 EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL-VDYSS 920
Query: 284 EYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
Y+ LI+SLCL A ETA +L +E+ + G+
Sbjct: 921 TYNSLIESLCL-ANKVETAFQLFSEMTKKGV 950
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 137/326 (42%), Gaps = 27/326 (8%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
LN LV + G ALE + + F+ P+ TY I+A + D A + ++M
Sbjct: 202 FLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 261
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKY-PPMPYINFLVAKLSQENE 121
A + +++ LCK K +EA + +E + P + L++ L E
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREALTL----VETENFVPDTVFYTKLISGLC-EAS 316
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVV---RALCRV---KDVGTAKQLMLEMIADGPPP 175
A++ L R A P VV LC K +G K+++ M+ +G P
Sbjct: 317 LFEEAMDFLN------RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYP 370
Query: 176 GNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKIL 235
+FN ++ YC +G+ A +++K + G P Y ++ G G + +L
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLNCDLL 429
Query: 236 EEAKKKHS-------VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
+ A+K +S VL + S R C ++++A ++ EM G + Y K+
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 289 IQSLCLKAMDWETAEKLHAELKENGL 314
+ LC A E A L E+K GL
Sbjct: 490 LNYLC-NASKMELAFLLFEEMKRGGL 514
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 124/295 (42%), Gaps = 16/295 (5%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P++ TY + L S + A + ++M + + Y+ ++ CK +++A
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 94 YKAAIELGKYPPMPYINFLVA------KLSQENE---------TVPLALEVLKEIPGDRR 138
+ E+G P + L+ K+S NE +P + I G +
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 139 ELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVE 198
++ + +C KDV + + P + ++ G+CK+ +E+A +
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 199 MMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYC 258
++ + G P+ Y + G G+++ A+++ E + T Y SLI Y
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 259 KMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
K+++ D A K+L++M E NV Y ++I LC K + A KL ++E G
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC-KVGKTDEAYKLMQMMEEKG 774
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 151 ALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRP 210
+LC+V G ++ + + + P + +I+G C+A E+A++ + + + P
Sbjct: 279 SLCKV---GKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 211 DVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLL 270
+V TY+ + G N ++ +++L + +P I++SL+ YC A KLL
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 271 TEMKEFGVRVNVDEYDKLIQSLC-----LKAMDWETAEKLHAELKENGLYLK-----GAT 320
+M + G Y+ LI S+C L + AEK ++E+ G+ L T
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 321 RALIRAVK 328
R L A K
Sbjct: 456 RCLCSAGK 463
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 118/295 (40%), Gaps = 11/295 (3%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ + L+ K+GK A EV + +TY I+ ++ D A V KM
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
L+ P +++ LCK K EA+ + + E G P + ++ +
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK- 794
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ LE+L+ + + ++ C+ + A L+ EM P A +
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 183 VITGYCKAGEMEQAVEMMKLLESRG---LRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
VI G+ K + +E + LL+ G P + Y ++ +E A ++LEE
Sbjct: 855 VIEGFNK-----EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 240 KKHSVLT--PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ L Y+SLI C + + A +L +EM + GV + + LI+ L
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 140/351 (39%), Gaps = 32/351 (9%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
+V K+G K+AL + K E +P+ Y I+ L + A + +ML+
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN------ 120
P ++ ++ C + +A + + IE P + N L++ +E
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 121 -------------ETVPLALEVLKEIPGDRRELAKK-----------RFPAVVRALCRVK 156
+TV + +R + AK F ++ CR K
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 157 DVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYA 216
V QL+ E+ G +N +I G+C+ + A ++ + + S G+ PD T
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 217 VIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEF 276
++ G+ ++E A ++ E + L V Y+ +I G CK + DEA L +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 277 GVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT-RALIRA 326
GV +V Y+ +I C K+ A L ++K+NG +T LIR
Sbjct: 567 GVEPDVQTYNVMISGFCGKSA-ISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 128/314 (40%), Gaps = 44/314 (14%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N ++ F G+ A + + P+ T+ I A + A +C
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+ML P+ + ++ CK + +A K +L P + N ++ +
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRA- 445
Query: 121 ETVPLALEVLKEIPGDRRELAKKR--FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+ V +++L+EI RR L + ++ C V ++ A+ L EMI+ G P
Sbjct: 446 KRVDEGMQLLREIS--RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLES--------------------------------- 205
N ++ G+C+ ++E+A+E+ ++++
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 206 --RGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQF 263
G+ PDV TY V+ SG+ + A + + K Y++LIRG K +
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 264 DEAVKLLTEMKEFG 277
D++++L++EM+ G
Sbjct: 624 DKSIELISEMRSNG 637
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 149/378 (39%), Gaps = 55/378 (14%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ F ++ + A+ ++ K E+ + N +++ + I+ ++L K+
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVY---------------KAAIELGKYPPMPYI 109
P+ + LL LC ++ EA A++ +E+G P +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 110 NFLVAKLSQENETVPLALEVLKEIP--------------------GDRRE----LAKKR- 144
N L+ L E + A V K + GD + L+K
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 145 ---------FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQ 195
+ A++ LC+ A+ L EM+ G P +N +I G+C G
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
A +++ + R + PDV T+ + S G++ A K+ +E + V Y+S+I
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLY 315
G+CK +FD+A + M +V ++ +I C +A + +L E+ GL
Sbjct: 410 GFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYC-RAKRVDEGMQLLREISRRGLV 464
Query: 316 LKGAT-RALIRAVKEMEN 332
T LI E++N
Sbjct: 465 ANTTTYNTLIHGFCEVDN 482
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 7/249 (2%)
Query: 69 PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALE 128
P + L+ LC+ L+ A + + +P + LV + N + +A E
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK-NGNLSMATE 465
Query: 129 VLKEIPGDRRELAKKRFPAVVRAL--CRVKDVGTAKQLMLEMIA-DGPPPGNAVFNFVIT 185
V E+ R+ + + RA+ R+ D A +L EM+A D P ++N I
Sbjct: 466 VYDEML--RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
G CK G + +A+E + + GL PD TY + GY G+ + AR + +E +K
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 583
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
+ + Y LI G+ K + ++A + TEMK+ GVR NV ++ L+ +C KA + + A +
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC-KAGNIDEAYRY 642
Query: 306 HAELKENGL 314
+++E G+
Sbjct: 643 LCKMEEEGI 651
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 143/337 (42%), Gaps = 9/337 (2%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ + K+GK A +F+ P+ TY I+ L + A + ++M
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP-MPYINFLVA--KLSQENE 121
P+ + L+ K L A VY + G P Y V +L ++
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
L E+ + D + + LC+V ++ A + ++ G P + +
Sbjct: 498 AFRLHEEM---VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYT 554
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
VI GY + G+ + A + + + L P V TY V+ G++ G +E A + E KK+
Sbjct: 555 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
+ +++L+ G CK DEA + L +M+E G+ N Y LI C WE
Sbjct: 615 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC-DFEKWEE 673
Query: 302 AEKLHAELKENGLYLKGAT-RALIRAV-KEMENEVVE 336
KL+ E+ + + G T RAL + + K+ E+ VE
Sbjct: 674 VVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVE 710
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%)
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
V++ L + + A + MI G P FN ++ KAG++E+ ++ ++ R
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
+ TY ++ +G+S G+ME AR+ + ++ +TP ++ LI GYCK FD+A
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ EM G+ Y+ I +LC
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALC 354
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 116/252 (46%), Gaps = 10/252 (3%)
Query: 60 QKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
+KM+ +P + +L L + + +A AVY+ IE G P + N ++ +
Sbjct: 192 EKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKA 251
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ + ++ E+ E ++ + ++ + + A++ +M G
Sbjct: 252 GD-LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
FN +I GYCK G + A + + + G+ P TY + + G ++ AR++L
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLS--- 367
Query: 240 KKHSVLTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
S+ P V Y++L+ GY KM +F EA L +++ + ++ Y+ LI LC ++
Sbjct: 368 ---SMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC-ESG 423
Query: 298 DWETAEKLHAEL 309
+ E A++L E+
Sbjct: 424 NLEGAQRLKEEM 435
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 151 ALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRP 210
ALC + A++L+ M A P +N ++ GY K G+ +A + L + + P
Sbjct: 352 ALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHP 407
Query: 211 DVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLL 270
+ TY + G G +E A+++ EE + + Y +L++G+ K A ++
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 271 TEMKEFGVRVNVDEYDKLIQSLC-LKAMDWETAEKLHAEL 309
EM G++ D Y +++ L+ D + A +LH E+
Sbjct: 468 DEMLRKGIK--PDGYAYTTRAVGELRLGDSDKAFRLHEEM 505
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 132/291 (45%), Gaps = 5/291 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
LV + K G LE+ E F PN Y + + R D + + +KM +
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+P+ + + LCK K+ +A ++ + +EL +Y +P N + L +
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIF-SDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 127 LEVLKEIPGDRRE---LAK-KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
LE K + RE LA + + ++ L R A+ ++ +M G P +N
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ G CK G + A ++ L++ G+ PD TY + GY + G+++AA+ +L+E + +
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ + L+ KM + EA +LL +M E G ++ + ++ LC
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 133/304 (43%), Gaps = 24/304 (7%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + +GK AA + ++ C PN++T + + +L++ A + +KM +
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKA-----AIELGKYPPMPYINFLVAKLSQENE 121
+ + ++ LC +L +A + K + LG YI + L EN
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN-SYIGLVDDSLI-ENN 519
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
+P + + ++ LC+ AK L EM+ + P + +N
Sbjct: 520 CLPDLI----------------TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
I +CK G++ A ++K +E +G + TY + G ++ +++E K+K
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
Y++ I+ C+ E+ ++A LL EM + + NV + LI++ C K D++
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC-KVPDFDM 682
Query: 302 AEKL 305
A+++
Sbjct: 683 AQEV 686
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F ++RALC V A++L EM G P F ++ GYCKAG ++ +E++ +E
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
S G+ P+ Y I S + G + + K++E+ +++ V V ++S I CK +
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 265 EAVKLLTEM---KEFGV-RVNVDEYDKLIQSLCLKAMDWETAEKLHAELKEN-------- 312
+A ++ ++M + G+ R N Y+ +++ C K E A+ L ++EN
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFC-KVGLLEDAKTLFESIRENDDLASLQS 328
Query: 313 -GLYLKGATRALIRAVKEMENEVV 335
++L+G L+R K +E E V
Sbjct: 329 YNIWLQG----LVRHGKFIEAETV 348
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 140/334 (41%), Gaps = 27/334 (8%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ F K+G + A +FE + +Y + ++ L R F A V ++M D
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P YS L+ LCK L +A + G P L+ + V
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK-VD 413
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A +L+E+ + ++ +L ++ + A++L+ +M G N ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 185 TGYCKAGEMEQAVEMMK------------------------LLESRGLRPDVYTYAVIAS 220
G C +GE+++A+E++K L+E+ L PD+ TY+ + +
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL-PDLITYSTLLN 532
Query: 221 GYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRV 280
G G A+ + E + V Y+ I +CK + A ++L +M++ G
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 281 NVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+++ Y+ LI L +K +E L E+KE G+
Sbjct: 593 SLETYNSLILGLGIKNQIFEI-HGLMDEMKEKGI 625
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 125/295 (42%), Gaps = 17/295 (5%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N L+ KLG A + + P++ TY + D A + Q
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M+ +P Y+ LL L K ++ EA + + E G N +V L
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLE--MIADGPPPGNA 178
E + A+E++K G R V + ++G + +++ +I + P
Sbjct: 481 E-LDKAIEIVK---GMR-----------VHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
++ ++ G CKAG +A + + L+PD Y + + G++ +A ++L++
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+KK + Y+SLI G Q E L+ EMKE G+ N+ Y+ IQ LC
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 144/325 (44%), Gaps = 21/325 (6%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQC-----EPNSFTYYLTIEALYRRSAFDWALPV 58
L+ L+ S K + F +F++ + +P+ + Y L +E+ + ++ +
Sbjct: 75 LSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWL 134
Query: 59 CQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLV----- 113
+ M+ P+ Y+ L+ LC + A ++ E G P LV
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 114 AKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGP 173
A L+ + + A+E +P K + +V + CR +++++ +M +G
Sbjct: 195 AGLTDKGLELLNAMESFGVLPN------KVIYNTIVSSFCREGRNDDSEKMVEKMREEGL 248
Query: 174 PPGNAVFNFVITGYCKAGEMEQAVEM---MKLLESRGL-RPDVYTYAVIASGYSNGGEME 229
P FN I+ CK G++ A + M+L E GL RP+ TY ++ G+ G +E
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 230 AARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLI 289
A+ + E ++ + + Y+ ++G + +F EA +L +M + G+ ++ Y+ L+
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 290 QSLCLKAMDWETAEKLHAELKENGL 314
LC M A+ + +K NG+
Sbjct: 369 DGLCKLGM-LSDAKTIVGLMKRNGV 392
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 18/255 (7%)
Query: 31 QCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEA 90
C P+ TY + L + F A + +M+ + P+ + + CK K+ A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 91 HAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKK------- 143
V K + G + + N L+ L +N+ EI G E+ +K
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF--------EIHGLMDEMKEKGISPNIC 630
Query: 144 RFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLL 203
+ ++ LC + V A L+ EM+ P F ++I +CK + + A E+ +
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETA 690
Query: 204 ESR-GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
S G + +Y+ ++ + G++ A ++LE + L +Y L+ CK ++
Sbjct: 691 VSICGQKEGLYS--LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDE 748
Query: 263 FDEAVKLLTEMKEFG 277
+ A +L +M + G
Sbjct: 749 LEVASGILHKMIDRG 763
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ +V LC+ +VG A QL+ +M G P +N ++ G C G + Q+++ ++ L
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 205 SRGLRPDVYTYA-VIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQF 263
+GL P+ +TY+ ++ + Y G EA K+L+E K V Y+ L+ G+CK +
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAV-KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 264 DEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE------------ 311
D+A+ L E+ G + NV Y+ L++ LC WE A L AE+
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGR-WEEANSLLAEMDGGDRAPSVVTYNI 321
Query: 312 --NGLYLKGATRALIRAVKEM 330
N L G T ++ +KEM
Sbjct: 322 LINSLAFHGRTEQALQVLKEM 342
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 123/300 (41%), Gaps = 13/300 (4%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N LV LG +L+ E+ PN+FTY +EA Y+ D A+ + +++
Sbjct: 180 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 239
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P S LL CK + +A A+++ G + N L+ L +
Sbjct: 240 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 299
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A +L E+ G R + + ++ +L A Q++ EM GN F
Sbjct: 300 -ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-----SKGNHQFRVTA 353
Query: 185 TGY-------CKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
T Y CK G+++ V+ + + R +P+ TY I S + +++ A I++
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
K T Y S+I C+ A +LL EM G + Y LI+ LCL+ M
Sbjct: 414 LSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGM 473
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 1/252 (0%)
Query: 69 PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALE 128
P LL LCK +LK+A V + + G P +LV +L + V A++
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRG-NVGYAMQ 162
Query: 129 VLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYC 188
+++++ + A+VR LC + + + Q + ++ G P ++F++
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 189 KAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPV 248
K ++AV+++ + +G P++ +Y V+ +G+ G + A + E K V
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVV 282
Query: 249 IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAE 308
Y+ L+R C +++EA LL EM +V Y+ LI SL + + L
Sbjct: 283 SYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
Query: 309 LKENGLYLKGAT 320
K N + AT
Sbjct: 343 SKGNHQFRVTAT 354
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 4/289 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L++ K + K A+ V E P++ Y + L +R +A+ + +KM D
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+ L+ LC L ++ + ++ G P +FL+ +E T A
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDE-A 230
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+++L EI E + ++ C+ A L E+ A G +N ++
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRC 290
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE-AKKKHSV- 244
C G E+A ++ ++ P V TY ++ + + G E A ++L+E +K H
Sbjct: 291 LCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFR 350
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+T Y+ +I CK + D VK L EM + N Y+ I SLC
Sbjct: 351 VTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLC 398
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 63/124 (50%)
Query: 168 MIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGE 227
++ G P A ++ CKA +++A+ +++L+ S G+ PD Y + + G
Sbjct: 97 LVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGN 156
Query: 228 MEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDK 287
+ A +++E+ + V Y++L+RG C + +++++ + + + G+ N Y
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216
Query: 288 LIQS 291
L+++
Sbjct: 217 LLEA 220
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 113/243 (46%), Gaps = 14/243 (5%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFE--VFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
N L+ S + G+ + AL+V ++ Q + +Y I L + D + +M
Sbjct: 320 NILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 379
Query: 63 LDARSIPE---WYSVGDLLVWLCK-GKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQ 118
+ R P + ++G L C+ K++EA + ++ K + ++ L +
Sbjct: 380 IYRRCKPNEGTYNAIGSL----CEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCR 435
Query: 119 ENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMI--ADGPPPG 176
+ T A ++L E+ + + A++R LC ++ + T +L ++ ++ P
Sbjct: 436 KGNTFA-AFQLLYEMTRCGFDPDAHTYSALIRGLC-LEGMFTGAMEVLSIMEESENCKPT 493
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
FN +I G CK + A+E+ +++ + P+ TYA++ G ++ E+E A+++L+
Sbjct: 494 VDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLD 553
Query: 237 EAK 239
E +
Sbjct: 554 ELR 556
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 149/336 (44%), Gaps = 3/336 (0%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
++ ++ +FS++G+ A+ + + P+S T +E ++A V +M
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+P+ S +++ + K++EA I+ G P ++ L EN
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC-ENGL 267
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
V A+ +++ + F +++ LC+ + A +++ EM+ +G P
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 183 VITGYCKAGEMEQAVEM-MKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I G CK G E+A + +KL+ S +P+V+TY + GY ++ A + K++
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
Y +LI G+CK F A +L+ M + G N+ Y+ I SLC K+ E
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 302 AEKLHAELKENGLYLKGATRALIRAVKEMENEVVES 337
E L+ GL G T ++ + +N++ ++
Sbjct: 448 YELLNKAF-SCGLEADGVTYTILIQEQCKQNDINQA 482
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P++ T L + AL + A+ +KM+D P + L+ LCK +K+A +
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEM 309
Query: 94 YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALC 153
+ + G P + L+ L + T LK + D + + +++ C
Sbjct: 310 LEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 369
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVY 213
+ + A+ L M G P + +I G+CKAG +A E+M L+ G P++Y
Sbjct: 370 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 429
Query: 214 TYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
TY A ++L +A V Y LI+ CK ++A+ M
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489
Query: 274 KEFGVRVNVDEYDKLIQSLC 293
+ G ++ + LI + C
Sbjct: 490 NKTGFEADMRLNNILIAAFC 509
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 122/311 (39%), Gaps = 37/311 (11%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
L+ K G K A E+ E+ +PN +T+ I+ L +R + A + K++
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 64 DARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP----------------- 105
+ + P ++ ++ CK KL A ++ E G +P
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 106 ---------------MPYI---NFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPA 147
MP I N + L +++ P A E+L + E +
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR-APEAYELLNKAFSCGLEADGVTYTI 468
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
+++ C+ D+ A M G + N +I +C+ +M+++ + +L+ S G
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
L P TY + S Y G+++ A K K+ V Y SLI G CK DEA
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 588
Query: 268 KLLTEMKEFGV 278
KL M + G+
Sbjct: 589 KLYEAMIDRGL 599
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 14/230 (6%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
PN +TY I++L ++S A + K + + L+ CK + +A A
Sbjct: 426 PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAF 485
Query: 94 YKAAIELGKYPPMPYINFLVA-----KLSQENETVPLALEVLKEIPGDRRELAKKRFPAV 148
+ + G M N L+A K +E+E + + L IP K+ + ++
Sbjct: 486 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP------TKETYTSM 539
Query: 149 VRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL 208
+ C+ D+ A + M G P + + +I+G CK +++A ++ + + RGL
Sbjct: 540 ISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYC 258
P T +A Y + A +LE KK + T +L+R C
Sbjct: 600 SPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRT---VRTLVRKLC 646
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 5/208 (2%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
M + N L+ +F + K K + +F+ P TY I + D AL
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 557
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
M +P+ ++ G L+ LCK + EA +Y+A I+ G PP L + + N
Sbjct: 558 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRN 617
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
++ A+ +L+ P D++ L + +VR LC K VG A +++
Sbjct: 618 DSAN-AMILLE--PLDKK-LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTL 673
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGL 208
T ++G+ ++ + + SRG+
Sbjct: 674 AAFTTACSESGKNNLVTDLTERI-SRGV 700
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 145/326 (44%), Gaps = 13/326 (3%)
Query: 13 KLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWY 72
K G+ AL +F + + P+ Y + I L + FD AL + +M D R +P
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 73 SVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKE 132
+ G LL+ LC+ L EA ++ + I G+ + N ++ ++ + ALE+ K
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG-CIEEALELFKV 493
Query: 133 IPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGE 192
+ + F +++ C+ +++ A++++ + G P + ++ Y G
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 193 MEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE---AKKKHSV----- 244
+ E+ + +++ G+ P TY+VI G G + E +L E K K +
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Query: 245 --LTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+ P + Y+++I+ C+++ A L MK + + Y+ LI SLC+ +
Sbjct: 614 EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 673
Query: 301 TAEKLHAELKENGLYLKGATRALIRA 326
+++ ++N K A LI+A
Sbjct: 674 ADSFIYSLQEQNVSLSKFAYTTLIKA 699
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 137/328 (41%), Gaps = 9/328 (2%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N L+ +G ALE+ EP+S TY + + + A V +
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAI----ELGKYPPMPYINFLVAKL 116
MLD P+ + LL C+ + + K + EL P + + K
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 117 SQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
+ +E AL + ++ D + V+ LC++ A L EM P
Sbjct: 377 GRIDE----ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+ ++ G C+ G + +A ++ L S G D+ Y ++ GY+ G +E A ++ +
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+ + ++SLI GYCK + EA K+L +K +G+ +V Y L+ +
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA-NC 551
Query: 297 MDWETAEKLHAELKENGLYLKGATRALI 324
+ ++ ++L E+K G+ T ++I
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 4/291 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L F LG A EV P+ TY + + + D L + + ML
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 65 -ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+ +L LCK ++ EA +++ G P + + ++ L + +
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK-F 414
Query: 124 PLALEVLKEIPGDRRELAKKR-FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+AL + E+ D+R L R A++ LC+ + A+ L+ +I+ G ++N
Sbjct: 415 DMALWLYDEMC-DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
VI GY K+G +E+A+E+ K++ G+ P V T+ + GY + ARKIL+ K
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ V Y +L+ Y +L EMK G+ Y + + LC
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F +++ C++ V AK ++ G P N +I G C G + +A+E+ +
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G+ PD TY ++A G+ G + A +++ + K + Y L+ G C++ D
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 265 EAVKLLTEMKEFGVRVN-VDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+ LL +M G +N + ++ LC K + A L ++K +GL
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLC-KTGRIDEALSLFNQMKADGL 394
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 22/276 (7%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDA---RSIPEWYSVG-------DLLVWLC 82
+ N TY ++ L R+ QK+ DA EW +G ++ C
Sbjct: 184 DKNEHTYSTVVDGLCRQ----------QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAK 142
K + A + + ++ G P + N L+ L ++ ALE+ ++ E
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVG-SIAEALELASDMNKHGVEPDS 292
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
+ + + + + A +++ +M+ G P + ++ G C+ G ++ + ++K
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 352
Query: 203 LESRGLRPD-VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKME 261
+ SRG + + +V+ SG G ++ A + + K V Y +I G CK+
Sbjct: 353 MLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412
Query: 262 QFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
+FD A+ L EM + + N + L+ LC K M
Sbjct: 413 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 128 EVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGY 187
+V KEI D+ E + VV LCR + + A + P FN +++GY
Sbjct: 177 DVYKEIK-DKNE---HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGY 232
Query: 188 CKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTP 247
CK G ++ A + GL P VY++ ++ +G G + A ++ + K
Sbjct: 233 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 292
Query: 248 VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
V Y+ L +G+ + A +++ +M + G+ +V Y L+ C
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC 338
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 4/301 (1%)
Query: 37 FTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKA 96
FTY I L + FD + M IP+ ++ L LC+ K+ A +
Sbjct: 80 FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFC 139
Query: 97 AIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVK 156
++ G+ P + L+ L + + V A+E+ + K A+V LC +
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGK-VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 157 DVGTAKQLMLEMIADGPPP-GNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTY 215
V A +++ E I V+N +I+G+CKAG +E+A + + G PD+ TY
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY 258
Query: 216 AVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKE 275
V+ + Y + ++ A ++ E + L Y+ L++ +C++ D+ + + E
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEME 318
Query: 276 FGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT-RALIRAVKEMENEV 334
+V Y LI++ C +A + A +L E+++ G+ + T +LI+A N
Sbjct: 319 PRGFCDVVSYSTLIETFC-RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSS 377
Query: 335 V 335
V
Sbjct: 378 V 378
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 125/296 (42%), Gaps = 1/296 (0%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ N L+ F K G+ + A + CEP+ TY + + Y + A V +M
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+ + + YS LL C+ + + +E + + + L+ + + T
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNT 341
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
A + +E+ + + ++++A R + AK+L+ +M G P +
Sbjct: 342 RK-AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ CK+G +++A + + + PD +Y + SG G + A K+ E+ K K
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
+ + +I G + ++ A K+ +M + G ++ D D LI++ C + D
Sbjct: 461 CCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMSAD 516
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 114/282 (40%), Gaps = 36/282 (12%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
EP+ +Y + I L+R A+ + M+ + P+ + L+V LC +K+ A+
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+ V +EI R +L+ + A++
Sbjct: 206 M-----------------------------------VAEEIKSARVKLSTVVYNALISGF 230
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
C+ + A+ L M G P +N ++ Y +++A +M + G++ D
Sbjct: 231 CKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDA 290
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
Y+Y + + + + + + V Y +LI +C+ +A +L E
Sbjct: 291 YSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEE 350
Query: 273 MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
M++ G+ +NV Y LI++ L+ + A+KL ++ E GL
Sbjct: 351 MRQKGMVMNVVTYTSLIKAF-LREGNSSVAKKLLDQMTELGL 391
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 43 IEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGK 102
I+ + + D A+ V K+ + S+ L+ L +L++A + + A ++
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 103 YPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAK 162
P N L+ + + A +V E+ + + + +++ LCR D+G AK
Sbjct: 183 RPNSVSFNILIKGFLDKCDW-EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 163 QLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGY 222
L+ +MI P F ++ G C GE +A ++M +E RG +P + Y ++ S
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 223 SNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNV 282
G ++ A+ +L E KK+ VIY+ L+ C + EA ++LTEM+ G + N
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 283 DEYDKLIQSLC 293
Y +I C
Sbjct: 362 ATYRMMIDGFC 372
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 112/267 (41%), Gaps = 1/267 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + K G A++VF K F C + I L + A D R
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P S L+ + A V+ +E+ P + N L+ L + N+ + A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR-NDDMGKA 240
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+L+++ R F +++ LC + AK+LM +M G PG + +++
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
K G +++A ++ ++ R ++PDV Y ++ + + A ++L E + K
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEM 273
Y +I G+C++E FD + +L M
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAM 387
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
N +I GE+E+A + LRP+ ++ ++ G+ + + EAA K+ +E
Sbjct: 154 LNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEML 213
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+ + V Y+SLI C+ + +A LL +M + +R N + L++ LC K ++
Sbjct: 214 EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKG-EY 272
Query: 300 ETAEKLHAELKENG 313
A+KL +++ G
Sbjct: 273 NEAKKLMFDMEYRG 286
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 137/303 (45%), Gaps = 18/303 (5%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N L+ K G ++ + + C PN TY I L + D A+ + ++M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+ ++ IP + G L+ L K ++ +A + + E G + + L++ L +E +
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 123 VPLALEVLKEIPGDRRELAKKR-------FPAVVRALCRVKDVGTAKQLMLEMIADGPPP 175
+E R++A+K + +V LCR AK+++ MIA G P
Sbjct: 379 --------EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 176 GNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKIL 235
++ ++ G+ K G E+AV++ K ++ G + + Y+V+ G G ++ A +
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 236 EEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM---KEFGVRVNVDEYDKLIQSL 292
+ V Y S+I+G C + D A+KL EM +E + +V Y+ L+ L
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Query: 293 CLK 295
C++
Sbjct: 551 CMQ 553
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 36/274 (13%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
PN ++ L I+AL + D A+ V + M + + +P+ Y+ L+ LCK +++ EA
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+ G P P I + ++ L
Sbjct: 244 LLDEMQSEG-CSPSPVI-----------------------------------YNVLIDGL 267
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
C+ D+ +L+ M G P +N +I G C G++++AV +++ + S P+
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
TY + +G A ++L +++ L IY LI G K + +EA+ L +
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 273 MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
M E G + N+ Y L+ LC + E E L+
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
Query: 123 VPLALEVLKEIPGDRRELAKK-RFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
V A+EV + +P +R+ L + ++ LC+ + + A L+ EM ++G P ++N
Sbjct: 203 VDRAIEVFRGMP-ERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYN 261
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I G CK G++ + +++ + +G P+ TY + G G+++ A +LE
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
+ V Y +LI G K + +AV+LL+ M+E G +N Y LI L K E
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL-FKEGKAEE 380
Query: 302 AEKLHAELKENG 313
A L ++ E G
Sbjct: 381 AMSLWRKMAEKG 392
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 124/290 (42%), Gaps = 1/290 (0%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N ++ + KL A+EVF +C P+ +TY ++ L + D A+ + +M
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
P L+ LCK L + G P N L+ L + + +
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK-L 308
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
A+ +L+ + + + ++ L + + A +L+ M G +++ +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I+G K G+ E+A+ + + + +G +P++ Y+V+ G G+ A++IL
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ Y SL++G+ K +EAV++ EM + G N Y LI LC
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 145/326 (44%), Gaps = 13/326 (3%)
Query: 13 KLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWY 72
K G+ AL +F + + P+ Y + I L + FD AL + +M D R +P
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 73 SVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKE 132
+ G LL+ LC+ L EA ++ + I G+ + N ++ ++ + ALE+ K
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG-CIEEALELFKV 493
Query: 133 IPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGE 192
+ + F +++ C+ +++ A++++ + G P + ++ Y G
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 193 MEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE---AKKKHSV----- 244
+ E+ + +++ G+ P TY+VI G G + E +L E K K +
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Query: 245 --LTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+ P + Y+++I+ C+++ A L MK + + Y+ LI SLC+ +
Sbjct: 614 EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 673
Query: 301 TAEKLHAELKENGLYLKGATRALIRA 326
+++ ++N K A LI+A
Sbjct: 674 ADSFIYSLQEQNVSLSKFAYTTLIKA 699
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 136/328 (41%), Gaps = 9/328 (2%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N L+ +G ALE+ EP+S TY + + + A V +
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYK----AAIELGKYPPMPYINFLVAKL 116
MLD P+ + LL C+ + + K EL P + + K
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 117 SQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
+ +E AL + ++ D + V+ LC++ A L EM P
Sbjct: 377 GRIDE----ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+ ++ G C+ G + +A ++ L S G D+ Y ++ GY+ G +E A ++ +
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+ + ++SLI GYCK + EA K+L +K +G+ +V Y L+ +
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA-NC 551
Query: 297 MDWETAEKLHAELKENGLYLKGATRALI 324
+ ++ ++L E+K G+ T ++I
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 4/291 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L F LG A EV P+ TY + + + D L + + ML
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 65 -ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+ +L LCK ++ EA +++ G P + + ++ L + +
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK-F 414
Query: 124 PLALEVLKEIPGDRRELAKKR-FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+AL + E+ D+R L R A++ LC+ + A+ L+ +I+ G ++N
Sbjct: 415 DMALWLYDEMC-DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
VI GY K+G +E+A+E+ K++ G+ P V T+ + GY + ARKIL+ K
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ V Y +L+ Y +L EMK G+ Y + + LC
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F +++ C++ V AK ++ G P N +I G C G + +A+E+ +
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G+ PD TY ++A G+ G + A +++ + K + Y L+ G C++ D
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 265 EAVKLLTEMKEFGVRVN-VDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+ LL +M G +N + ++ LC K + A L ++K +GL
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLC-KTGRIDEALSLFNQMKADGL 394
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 22/276 (7%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDA---RSIPEWYSVG-------DLLVWLC 82
+ N TY ++ L R+ QK+ DA EW +G ++ C
Sbjct: 184 DKNEHTYSTVVDGLCRQ----------QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAK 142
K + A + + ++ G P + N L+ L ++ ALE+ ++ E
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVG-SIAEALELASDMNKHGVEPDS 292
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
+ + + + + A +++ +M+ G P + ++ G C+ G ++ + ++K
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 352
Query: 203 LESRGLRPD-VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKME 261
+ SRG + + +V+ SG G ++ A + + K V Y +I G CK+
Sbjct: 353 MLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412
Query: 262 QFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
+FD A+ L EM + + N + L+ LC K M
Sbjct: 413 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 128 EVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGY 187
+V KEI D+ E + VV LCR + + A + P FN +++GY
Sbjct: 177 DVYKEIK-DKNE---HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGY 232
Query: 188 CKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTP 247
CK G ++ A + GL P VY++ ++ +G G + A ++ + K
Sbjct: 233 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 292
Query: 248 VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
V Y+ L +G+ + A +++ +M + G+ +V Y L+ C
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC 338
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 36/289 (12%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ K+G ++AL + K E + + Y I+ L + A + +M D
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ + ++ C+ + +A + + IE P +
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVV------------------- 147
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
F A++ AL + V A+++ +M+ G P +N +I G
Sbjct: 148 -----------------TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDG 190
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+CK + A M+ + S+ PDV T++ + +GY ++ +I E ++ V
Sbjct: 191 FCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 250
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
V Y +LI G+C++ D A LL M GV N + ++ SLC K
Sbjct: 251 TVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK 299
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 115/280 (41%), Gaps = 18/280 (6%)
Query: 32 CEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAH 91
C P+ T+ + L AL + +M++ P G ++ LCK + A
Sbjct: 6 CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61
Query: 92 AVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVR- 150
+ E + N ++ +L ++ + A + E+ K FP V+
Sbjct: 62 NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH-AQNLFTEMHD------KGIFPDVITY 114
Query: 151 -----ALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLES 205
+ CR A+QL+ +MI P F+ +I K G++ +A E+ +
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 206 RGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDE 265
RG+ P TY + G+ + A+++L+ K V + +LI GYCK ++ D
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 266 AVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
+++ EM G+ N Y LI C + D + A+ L
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFC-QVGDLDAAQDL 273
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 116/259 (44%), Gaps = 6/259 (2%)
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M++ P+ + L+ LC ++ +A A+ +E G P IN L E+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTES- 59
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
AL +L ++ + + A++ LC+ A+ L EM G P ++
Sbjct: 60 ----ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I +C++G A ++++ + R + PDV T++ + + G++ A +I + ++
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
T + Y+S+I G+CK ++ ++A ++L M +V + LI C KA +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC-KAKRVDN 234
Query: 302 AEKLHAELKENGLYLKGAT 320
++ E+ G+ T
Sbjct: 235 GMEIFCEMHRRGIVANTVT 253
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N ++ K G A +F + P+ TY I++ R + A + + M
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
++ + P+ + L+ L K K+ EA +Y + G +P N ++ +++
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR- 196
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A +L + F ++ C+ K V ++ EM G +
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I G+C+ G+++ A +++ ++ S G+ P+ T+ + + + E+ A ILE+ +K
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 5/283 (1%)
Query: 12 SKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEW 71
+K+ K + + + ++ + +T L + + S A KM+ P+
Sbjct: 83 AKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDI 142
Query: 72 YSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLK 131
+ L+ C G +++EA ++ +E+G P + ++ L + N V AL +
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK-NGHVNYALSLFD 201
Query: 132 EIP--GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCK 189
++ G R ++ + ++V LC A L+ M P FN +I + K
Sbjct: 202 QMENYGIRPDVV--MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 190 AGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI 249
G+ A E+ + + P+++TY + +G+ G ++ AR++ + K V
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
Y SLI G+CK ++ D+A+K+ EM + G+ N Y LIQ
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 40/314 (12%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ +F K GK A E++ + PN FTY I D A + M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
P+ + L+ CK KK+ +A ++ ++SQ
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIF-------------------YEMSQ----- 345
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
K + G+ + +++ +V A+++ M++ G PP +N +
Sbjct: 346 -------KGLTGN-----TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 184 ITGYCKAGEMEQAVEMMKLLESR---GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+ C G++++A+ + + ++ R G+ P+++TY V+ G G++E A + E+ +K
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+ + + Y +I+G CK + AV L + GV+ NV Y +I L + + E
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
Query: 301 TAEKLHAELKENGL 314
A L ++KE+G+
Sbjct: 514 -AHVLFRKMKEDGV 526
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 1/245 (0%)
Query: 52 FDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINF 111
F+ AL + M+++R +P LL + K KK + +G + N
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 112 LVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD 171
L+ Q ++ LA L ++ E F +++ C + A ++ +M+
Sbjct: 113 LMNCFCQSSQPY-LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P ++ +I CK G + A+ + +E+ G+RPDV Y + +G N G A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+L K+ + +++LI + K +F +A +L EM + N+ Y LI
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 292 LCLKA 296
C++
Sbjct: 292 FCMEG 296
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 2/262 (0%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
+P++ TY + I + FD AL + +M+ + P + G L+ LCK ++KEA
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 93 VYKAAIEL-GKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
+ +++ G P + L+ L Q E + A ++ E + ++ + ++ +
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGE-LSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
L + ++ EM G P +N +I G+C + E A ++ + +GL+PD
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT 271
V +Y +I + + E A + E+ ++ + Y + G C+ QF+EA +L
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILD 387
Query: 272 EMKEFGVRVNVDEYDKLIQSLC 293
EM G + D + +Q LC
Sbjct: 388 EMLFKGYKPRRDRLEGFLQKLC 409
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 161 AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEM-MKLLESRGLRPDVYTYAVIA 219
A +L EM+ P F +I G CK +++A++M +L+ G+RP V+ YA +
Sbjct: 171 ALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLI 230
Query: 220 SGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVR 279
GE+ A K+ +EA + + IY +LI K + +E +L EM E G +
Sbjct: 231 KALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCK 290
Query: 280 VNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+ Y+ LI C++ D E+A ++ E+ E GL
Sbjct: 291 PDTVTYNVLINGFCVEN-DSESANRVLDEMVEKGL 324
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 112/274 (40%), Gaps = 42/274 (15%)
Query: 27 FEVFQCEP----NSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLC 82
FE+ +P FT LT A RR ++ + QKM + YS L+ C
Sbjct: 60 FEMVHSQPLPSIVDFTRLLTATANLRR--YETVIYFSQKMELYGISHDLYSFTILIHCFC 117
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAK 142
+ +L A +V ++LG P +
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIV----------------------------------- 142
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
F +++ C V +G A L++ M+ G P V+N +I G CK GE+ A+E++
Sbjct: 143 -TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+E +GL DV TY + +G G A ++L + K+ V + +LI + K
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
DEA +L EM + V N Y+ +I LC+
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 134/318 (42%), Gaps = 14/318 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ N L+ K G+ ALE+ + E + TY + L + A + + M
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+ P+ + L+ K L EA +YK I+ P N ++ L
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVV------RALCRVKDVGTAKQLMLEMIADGPPPG 176
A + + +K FP VV C+ + V +L M +G
Sbjct: 298 YD-AKKTFDLMA------SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+N +I GYC+ G++ A+++ + SR + PD+ T+ ++ G GE+E+A +
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+ ++ + V Y+ +I G CK ++ ++A +L + GV+ + Y +I LC
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Query: 297 MDWETAEKLHAELKENGL 314
E A++L +KE G+
Sbjct: 471 PRRE-ADELIRRMKEEGI 487
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F ++ CR + A ++ +M+ G P F ++ G+C + A ++ L+
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G P+V Y + G GE+ A ++L E +KK V Y++L+ G C ++
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+A ++L +M + + +V + LI +K + + A++L+ E+ ++ +
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVF-VKQGNLDEAQELYKEMIQSSV 277
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 161 AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIAS 220
A L EM+ P P F ++T E + + +E G+ D+Y++ ++
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 221 GYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRV 280
+ + A +L + K + V + SL+ G+C + + +A L+ M + G
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 281 NVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
NV Y+ LI LC K + A +L E+++ GL
Sbjct: 175 NVVVYNTLIDGLC-KNGELNIALELLNEMEKKGL 207
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 135/315 (42%), Gaps = 38/315 (12%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRR-SAFDWALPVC 59
+Y L+ +F+ G+ + A+ VF+K E C+P TY + + + + ++ +
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 60 QKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
+KM P+ Y+ L+ +G +EA V++ A S +
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE--------------EMKAAGFSYD 313
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
T L+V K P A +++ EM+ +G P
Sbjct: 314 KVTYNALLDVY----------GKSHRPK------------EAMKVLNEMVLNGFSPSIVT 351
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N +I+ Y + G +++A+E+ + +G +PDV+TY + SG+ G++E+A I EE +
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+++ I+ Y +F E +K+ E+ G+ ++ ++ L+ MD
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 300 ETAEKLHAELKENGL 314
E + + E+K G
Sbjct: 472 EVS-GVFKEMKRAGF 485
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 35/303 (11%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ ++S+ G + A+ V+ + P+ TY + AL R ++ + V +M
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHA----VYKAAIE------------LGKYPPMP 107
D R P + LL GK++ H+ VY IE K +P
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 108 YINFLVAKLSQENETVPLA-LEVLKEIPGDRRELAKKR-----------------FPAVV 149
++L + + + L + I G R+ +AK + +++
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 150 RALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLR 209
R D G +++++ E++A G P +N VI YC+ M A + + + G+
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 210 PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
PDV TY Y+ E A ++ K Y+S++ GYCK+ + DEA KL
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA-KL 790
Query: 270 LTE 272
E
Sbjct: 791 FVE 793
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 9/297 (3%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F + G VF++ + P T+ I A R +F+ A+ V ++MLD
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP--MPYINFLVAKLSQENET 122
A P+ + +L L +G +++ V A +E G+ P + Y + L A + +
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVL-AEMEDGRCKPNELTYCSLLHAYANGKEIG 576
Query: 123 V--PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ LA EV + R L K +V + + A++ E+ G P
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLK----TLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +++ Y + + +A ++ ++ RG P + TY + +S + + +IL E
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
K + Y+++I YC+ + +A ++ +EM+ G+ +V Y+ I S +M
Sbjct: 693 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 142/312 (45%), Gaps = 4/312 (1%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALP-VCQKM 62
N + + GK +++F++ V P+ T+ T+ A++ ++ D + V ++M
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN-TLLAVFGQNGMDSEVSGVFKEM 480
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
A +PE + L+ + ++A VY+ ++ G P + N ++A L++
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG-M 539
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ +VL E+ R + + + +++ A K++G L E+ + P +
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ K + +A L+ RG PD+ T + S Y + A +L+ K++
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
+ Y+SL+ + + F ++ ++L E+ G++ ++ Y+ +I + C + A
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC-RNTRMRDA 718
Query: 303 EKLHAELKENGL 314
++ +E++ +G+
Sbjct: 719 SRIFSEMRNSGI 730
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
N+V +I+ K G + A M L+ G DVY+Y + S ++N G A + +
Sbjct: 173 NSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFK 232
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKM-EQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
+ ++ T + Y+ ++ + KM +++ L+ +MK G+ + Y+ LI + C +
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKR 291
Query: 296 AMDWETAEKLHAELKENGL-YLKGATRALI 324
+ A ++ E+K G Y K AL+
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 81 LCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRREL 140
LCK A ++ E G +P + N ++ A ++L+ + +
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD-ADQLLRHMIEKQINP 78
Query: 141 AKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMM 200
F A++ A + + V A+++ EM+ P +N +I G+CK ++ A M+
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 201 KLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKM 260
+ S+G PDV T++ + +GY ++ +I E ++ V V Y +LI G+C++
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 261 EQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
D A LL EM GV + + ++ LC K
Sbjct: 199 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 233
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 146 PAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLES 205
A+V LC+ + A+ L EM G P +N +I +C +G A ++++ +
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 206 RGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDE 265
+ + PD+ T++ + + + ++ A +I +E + T + Y+S+I G+CK ++ D+
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 266 AVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT 320
A ++L M G +V + LI C KA + ++ E+ G+ T
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYC-KAKRVDNGMEIFCEMHRRGIVANTVT 187
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
PN TY I++ + A + + M++ + P+ + L+ K +K+ EA +
Sbjct: 43 PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 102
Query: 94 YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALC 153
YK + +P N ++ +++ V A +L + F ++ C
Sbjct: 103 YKEMLRWSIFPTTITYNSMIDGFCKQDR-VDDAKRMLDSMASKGCSPDVVTFSTLINGYC 161
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVY 213
+ K V ++ EM G + +I G+C+ G+++ A +++ + S G+ PD
Sbjct: 162 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYI 221
Query: 214 TYAVIASGYSNGGEMEAARKILEEAKK 240
T+ + +G + E+ A ILE+ +K
Sbjct: 222 TFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 1/170 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ ++ + C A QL+ MI P F+ +I + K ++ +A E+ K +
Sbjct: 48 YNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
+ P TY + G+ ++ A+++L+ K V + +LI GYCK ++ D
Sbjct: 108 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 167
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+++ EM G+ N Y LI C + D + A+ L E+ G+
Sbjct: 168 NGMEIFCEMHRRGIVANTVTYTTLIHGFC-QVGDLDAAQDLLNEMISCGV 216
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 10/244 (4%)
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPMPY----INFLVAKLSQENETVPLALEVLKEI-P 134
W+ + K Y + + L +PY I L+ K ++ + +
Sbjct: 49 WISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRK 108
Query: 135 GDRRELAKKRFP----AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA 190
GD E+ K P ++ +L R V K+L EM+ D P FN ++ GYCK
Sbjct: 109 GDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKL 168
Query: 191 GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIY 250
G + +A + + L G PD +TY +G+ E++AA K+ +E + V Y
Sbjct: 169 GYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSY 228
Query: 251 HSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELK 310
LI G + ++ DEA+ LL +MK+ NV Y LI +LC E A L ++
Sbjct: 229 TQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSE-AMNLFKQMS 287
Query: 311 ENGL 314
E+G+
Sbjct: 288 ESGI 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 123/255 (48%), Gaps = 5/255 (1%)
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP-MPYINFLVAKLSQE 119
+ML+ P+ Y+ L+ CK + EA I+ G P Y +F+ ++
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
V A +V KE+ + + + ++ L K + A L+++M D P
Sbjct: 205 E--VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT 262
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+ +I C +G+ +A+ + K + G++PD Y V+ + +G ++ A +LE
Sbjct: 263 YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHML 322
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+ + + Y++LI+G+CK + +A+ LL++M E + ++ Y+ LI C + +
Sbjct: 323 ENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQC-SSGNL 380
Query: 300 ETAEKLHAELKENGL 314
++A +L + ++E+GL
Sbjct: 381 DSAYRLLSLMEESGL 395
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 37/281 (13%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N LV + KLG A + C+P+ FTY I RR D A V +
Sbjct: 155 IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFK 214
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M S L+ L + KK+ EA + L+ K+ +N
Sbjct: 215 EMTQNGCHRNEVSYTQLIYGLFEAKKIDEALS-------------------LLVKMKDDN 255
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
P R + ++ ALC A L +M G P + ++
Sbjct: 256 CC-----------PNVRT------YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMY 298
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+I +C +++A +++ + GL P+V TY + G+ + A +L + +
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLE 357
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
++ V + Y++LI G C D A +LL+ M+E G+ N
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 19 AALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLL 78
AA +VF++ C N +Y I L+ D AL + KM D P + L+
Sbjct: 208 AAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLI 267
Query: 79 VWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRR 138
LC + EA ++K E G P L+ +T+ A +L+ + +
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFC-SGDTLDEASGLLEHMLENGL 326
Query: 139 ELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVE 198
+ A+++ C+ K+V A L+ +M+ P +N +I G C +G ++ A
Sbjct: 327 MPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYR 385
Query: 199 MMKLLESRGLRPDVYT 214
++ L+E GL P+ T
Sbjct: 386 LLSLMEESGLVPNQRT 401
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 12/290 (4%)
Query: 18 KAALEVFEKFEVFQCEPNSFTY--YLTIEA-----LYRRSAFDWALPVCQKMLDARSIPE 70
K++L+ C+ SF Y L+I + L + D AL + +KM+ + IP
Sbjct: 96 KSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPG 155
Query: 71 WYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL 130
+ LL LCK +++A + + E+G P N L+ L N V AL +
Sbjct: 156 LITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN-VDKALYLF 214
Query: 131 KEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGP---PPGNAVFNFVITGY 187
+ + +V ALC+ +G + +LE I D P + V ++
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDS 274
Query: 188 C-KAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
C K G + QA+E+ K + + + D Y VI G + G M AA + + K+
Sbjct: 275 CFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD 334
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
Y++LI CK +FDEA L M+ GV + Y +IQ LC+
Sbjct: 335 VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 127/277 (45%), Gaps = 4/277 (1%)
Query: 41 LTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLV-WLCKGKKLKEAHAVYKAAIE 99
+ +++ ++ AL V ++M +++P V ++++ LC + A+ ++
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEM-SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 328
Query: 100 LGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVG 159
G P + N L++ L +E + A ++ + + + +++ LC DV
Sbjct: 329 RGVNPDVFTYNTLISALCKEGK-FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 160 TAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIA 219
A + +L M+ P ++N VI GY + G+ A+ ++ L+ S G++P+VYT +
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Query: 220 SGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVR 279
GY GG + A + E + Y+ L+ C + A +L EM G +
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507
Query: 280 VNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYL 316
++ Y +L++ LC K + AE L + ++ G+ +
Sbjct: 508 PDIITYTELVRGLCWKGR-LKKAESLLSRIQATGITI 543
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 68/132 (51%)
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
++ + ++ C G+++ A+ + K + G+ P + T+ + +G G +E A ++ E
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
++ V Y++LI+G C + D+A+ L M ++G+R N + ++ +LC K +
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 298 DWETAEKLHAEL 309
+KL E+
Sbjct: 242 IGNNNKKLLEEI 253
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 108/279 (38%), Gaps = 4/279 (1%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
IL D F K G ALEV+++ +S Y + I L A M
Sbjct: 270 ILMDSCF---KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+ P+ ++ L+ LCK K EA ++ G P ++ L +
Sbjct: 327 VKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD- 385
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
V A E L + + V+ R D +A ++ M++ G P N
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I GY K G + A + + S + PD TY ++ G + A ++ +E ++
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
+ Y L+RG C + +A LL+ ++ G+ ++
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITID 544
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 1/234 (0%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
P+ FTY I AL + FD A + M + P+ S ++ LC + A+
Sbjct: 332 NPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANE 391
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+ ++ P + N ++ + +T AL VL + + A++
Sbjct: 392 FLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS-ALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
+ + A + EM + P +N ++ C G + A ++ + RG +PD+
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
TY + G G ++ A +L + + V + L + Y ++++ EA
Sbjct: 511 ITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 136/294 (46%), Gaps = 5/294 (1%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ N ++ + S+ G A+++FEK + C+P + T+ I+ + + + + M
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 63 L-DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
L D P + L+ C +K++EA + G P + N L ++
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
T ++ + ++ + + +V C + A + M G P VFN
Sbjct: 511 TCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I G+ +M+ E++ L+E G++PDV T++ + + +S+ G+M+ +I + +
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE- 629
Query: 242 HSVLTPVI--YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ P I + L +GY + + ++A ++L +M++FGVR NV Y ++I C
Sbjct: 630 -GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ +V AL R K + L+ ++ +G P +FN +I ++G ++QA+++ + ++
Sbjct: 357 YTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK 416
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPV--IYHSLIRGYCKMEQ 262
G +P T+ + GY G++E + ++L + + +L P + L++ +C +
Sbjct: 417 ESGCKPTASTFNTLIKGYGKIGKLEESSRLL-DMMLRDEMLQPNDRTCNILVQAWCNQRK 475
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKL------IQSLCLKAMDWETAEKLHAELKEN 312
+EA ++ +M+ +GV+ +V ++ L I S C A D LH ++K N
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC-TAEDMIIPRMLHNKVKPN 530
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 161 AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIAS 220
A + +I +G P + ++T + + ++ +E GL+PD + I +
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 221 GYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM-KEFGVR 279
S G ++ A KI E+ K+ T +++LI+GY K+ + +E+ +LL M ++ ++
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 280 VNVDEYDKLIQSLC 293
N + L+Q+ C
Sbjct: 458 PNDRTCNILVQAWC 471
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 145/346 (41%), Gaps = 41/346 (11%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQ-CEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
N L+ K+G+ K A E+ + ++ + C PN+ TY I+ R + A V +M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEA-----------------------HAV------ 93
+ P +V ++ +C+ L A HA
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 94 ------YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPA 147
Y+ +E G P L++ L Q A+ V++++ L +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD-AIRVVEKLKEGGFSLDLLAYNM 551
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
++ C + +++ +M +G P + +N +I+ + K + E MM+ + G
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTP--VIYHSLIRGYCKMEQFDE 265
L P V TY + Y + GE++ A K+ ++ HS + P VIY+ LI + K+ F +
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL-HSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 266 AVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
A+ L EMK VR NV+ Y+ L + L K ET KL E+ E
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKT-QGETLLKLMDEMVE 715
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 129/297 (43%), Gaps = 14/297 (4%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCE------PNSFTYYLTIEALYRRSAFDWALPVCQ 60
L+ + K + ALEVFEK + + +S + I+ L + A +
Sbjct: 335 LINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 61 KM-LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
+M L+ R P + L+ C+ KL+ A V E P + +N +V + +
Sbjct: 395 RMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 120 ---NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
N V +++ KE G + + + ++ A C V +V A +M+ G P
Sbjct: 455 HGLNMAVVFFMDMEKE--GVKGNVVT--YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
++ +I+G C+ A+ +++ L+ G D+ Y ++ + + E ++L
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLT 570
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ +K+ + Y++LI + K + F+ +++ +M+E G+ V Y +I + C
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 3/299 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ K GK + A+ ++ PN+ +Y I+A + +D A + +M +
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P+ + G L+ L + +A + I+ G P N L++ L + +P
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468
Query: 125 LALEVLKEIPGDRRELAKKR-FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
L + E+ DR L + ++ R D A+++ + G N +
Sbjct: 469 AKL-LFSEML-DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I G+C++G +++A+ M + L PD +TY+ I GY +M A KI +K
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
V Y SLI G+C F A + EM+ + NV Y LI+SL ++ E A
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Query: 104 PPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQ 163
P + N L+ +L +E + +A+ L E + +++A C+ K+ A +
Sbjct: 343 PDVATYNILINRLCKEGKK-EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 164 LMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYS 223
L+L+M G P + +I G +G M+ AV M L RG+ PD Y ++ SG
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 224 NGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVD 283
G A+ + E ++ + +Y +LI G+ + FDEA K+ + E GV+V+V
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 284 EYDKLIQSLCLKAM 297
++ +I+ C M
Sbjct: 522 HHNAMIKGFCRSGM 535
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 48/267 (17%)
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
S+P+ + LL L K ++L +A VY + G LV + E +
Sbjct: 166 SVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK----- 220
Query: 127 LEVLKEIPGDRRELAKKRFP------AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+EV +++ R K P ++ C++ D+ A + E+ G P F
Sbjct: 221 VEVGRKLIEGR--WGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLR------------------------------- 209
+I G+CK G+ + ++ ++ RGLR
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338
Query: 210 ----PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDE 265
PDV TY ++ + G+ E A L+EA KK + + Y LI+ YCK +++D
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 266 AVKLLTEMKEFGVRVNVDEYDKLIQSL 292
A KLL +M E G + ++ Y LI L
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGL 425
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 161 AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIAS 220
A + +++I G P A++N +++G CK G A + + R + PD Y YA +
Sbjct: 434 AVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLID 493
Query: 221 GYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRV 280
G+ G+ + ARK+ + +K + V ++++I+G+C+ DEA+ + M E +
Sbjct: 494 GFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVP 553
Query: 281 NVDEYDKLIQSLCLKAMDWETAEKLHAELKEN 312
+ Y +I +K D TA K+ +++N
Sbjct: 554 DKFTYSTIIDGY-VKQQDMATAIKIFRYMEKN 584
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
P N +++ K+ + A ++ + RG D Y+ ++ G N G++E RK+
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 235 LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
+E K + V Y+++I GYCK+ + A + E+K G ++ + +I C
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC- 286
Query: 295 KAMDWETAEKLHAELKENGL 314
K D+ +++L +E+KE GL
Sbjct: 287 KEGDFVASDRLLSEVKERGL 306
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 19/289 (6%)
Query: 11 FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPE 70
+ ++G + A+E+F + + F C+P+ Y ++ L + V + M P
Sbjct: 121 YRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPN 180
Query: 71 WYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL 130
++ LL LCK K+ A + G P +++ + + + ++
Sbjct: 181 VFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE--------VGLV 232
Query: 131 KEIPGDRRELAKKRFP------AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
KE RELA++ P A++ LC+ D A +LM EM+ G P ++ +I
Sbjct: 233 KE----GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
C +G++E A + + RG P++YT + + G G A + + + +
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL 348
Query: 245 LTPVI-YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
V+ Y++L++G+C +AV + + M+E G N+ Y LI
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 105/269 (39%), Gaps = 37/269 (13%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N LV F G A+ VF E C PN TY I +R + D A+ + KML
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS------- 117
+ P +++ LC+ K KEA ++ + + P +P N + L
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 118 ---------QENETVPLALEV------------LKEIPGDRREL-------AKKRFPAVV 149
Q++ P + ++E G RE+ + + ++
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 150 RALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLES--RG 207
C G A QL+ +M+ DG P N +I YCK G+ E+A +M+ L+ R
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILE 236
RPDV +Y + G E +LE
Sbjct: 596 WRPDVISYTNVIWGLCRSNCREDGVILLE 624
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 134/317 (42%), Gaps = 47/317 (14%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
EPN FTY + ++AL + + D A + +M + P+ S ++ +C+ +KE
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Query: 93 VYKAAIELGKYPPMPYI-NFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
+ + ++ P+ + N L+ L +E++ A E+++E+ + ++
Sbjct: 238 LAE------RFEPVVSVYNALINGLCKEHDYKG-AFELMREMVEKGISPNVISYSTLINV 290
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPG----------------------------------- 176
LC + A + +M+ G P
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 177 NAV-FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKIL 235
N V +N ++ G+C G + +AV + +E G P++ TY + +G++ G ++ A I
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 236 EEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
+ V+Y +++ C+ +F EA L+ M + +V ++ I+ LC
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 296 A-MDWETAEKLHAELKE 311
+DW AEK+ ++++
Sbjct: 471 GRLDW--AEKVFRQMEQ 485
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 97/248 (39%), Gaps = 67/248 (27%)
Query: 112 LVAKLSQENETVPLALEVLKEIPGDRR-ELAKKRFPAVVRALCRVKDVGTAKQLMLEMIA 170
+V +L QE+ VPLAL K I + F ++R L V + + L+ +M
Sbjct: 46 VVKRLRQES-CVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKL 104
Query: 171 DGPPPGNAVFNFVITGYCKAGEMEQAVEMMK---------------------LLESR--- 206
G +F VI+ Y + G E+AVEM L E+R
Sbjct: 105 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 164
Query: 207 -----------GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK---------HSVLT 246
G P+V+TY V+ +++ A+K+L E K +V++
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 247 -------------------PV--IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEY 285
PV +Y++LI G CK + A +L+ EM E G+ NV Y
Sbjct: 225 SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 286 DKLIQSLC 293
LI LC
Sbjct: 285 STLINVLC 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 5/245 (2%)
Query: 32 CEPNSFTYYLTIEALY-RRSAFDWALPVCQKMLDARSI-PEWYSVGDLLVWLCKGKKLKE 89
C PN +T ++ + R + FD AL + +M+ + P + L+ C + +
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 90 AHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVV 149
A +V+ E+G P + L+ ++ ++ A+ + ++ + +V
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRG-SLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 150 RALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG-L 208
ALCR A+ L+ M + P FN I G C AG ++ A ++ + +E +
Sbjct: 430 EALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVK 268
P++ TY + G + +E A + E + + Y++L+ G C A++
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 269 LLTEM 273
L+ +M
Sbjct: 550 LVGKM 554
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 146/347 (42%), Gaps = 41/347 (11%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQ-CEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
N L+ K+G+ K A E+ + ++ + C PN+ TY I+ R + A V +M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEA-----------------------HAV------ 93
+ P +V ++ +C+ L A HA
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 94 ------YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPA 147
Y+ +E G P L++ L Q A+ V++++ L +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD-AIRVVEKLKEGGFSLDLLAYNM 551
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
++ C + +++ +M +G P + +N +I+ + K + E MM+ + G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTP--VIYHSLIRGYCKMEQFDE 265
L P V TY + Y + GE++ A K+ ++ HS + P VIY+ LI + K+ F +
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL-HSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 266 AVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKEN 312
A+ L EMK VR NV+ Y+ L + L K ET KL E+ E+
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG-ETLLKLMDEMVEH 716
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 130/297 (43%), Gaps = 14/297 (4%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCE------PNSFTYYLTIEALYRRSAFDWALPVCQ 60
L+ + K + ALEVFE+ + + +S + I+ L + A +
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 61 KM-LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
+M L+ R +P + L+ C+ KL+ A V E P + +N +V + +
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 120 ---NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
N V +++ KE G + + + ++ A C V +V A +M+ G P
Sbjct: 455 HGLNMAVVFFMDMEKE--GVKGNVVT--YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
++ +I+G C+ A+ +++ L+ G D+ Y ++ + + E ++L
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ +K+ + Y++LI + K + F+ +++ +M+E G+ V Y +I + C
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
ET PL L L E RE+ + ++ + KD+ +++L EM+ G P NA F
Sbjct: 156 ETAPLVLNNLLETMKPSREVI--LYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATF 213
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+I+ + G ++AVE + + S G PD T A + Y G ++ A + + A+
Sbjct: 214 TTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRART 273
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+ + V + +LIR Y +D + + EMK GV+ N+ Y++LI S+ W+
Sbjct: 274 EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQ 333
Query: 301 TAEKLHAELKENGLYLKGAT-RALIRA 326
A+ ++ +L NG +T AL+RA
Sbjct: 334 -AKIIYKDLITNGFTPNWSTYAALVRA 359
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 114/266 (42%), Gaps = 4/266 (1%)
Query: 15 GKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSV 74
G K A+E FEK F CEP++ T I+A R D AL + + + + +
Sbjct: 224 GVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTF 283
Query: 75 GDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL-KEI 133
L+ +Y+ LG P + N L+ + + P +++ K++
Sbjct: 284 STLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKR--PWQAKIIYKDL 341
Query: 134 PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEM 193
+ + A+VRA R + A + EM G ++N +++ +
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYV 401
Query: 194 EQAVEMMKLLES-RGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHS 252
++A E+ + +++ PD +T++ + + Y+ G + A L + ++ T + S
Sbjct: 402 DEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTS 461
Query: 253 LIRGYCKMEQFDEAVKLLTEMKEFGV 278
+I+ Y K +Q D+ V+ ++ E G+
Sbjct: 462 VIQCYGKAKQVDDVVRTFDQVLELGI 487
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 145/348 (41%), Gaps = 41/348 (11%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQ-CEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
N L+ K+G+ K A E+ + ++ + C PN+ TY I+ R + A V +M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEA-----------------------HAV------ 93
+ P +V ++ +C+ L A HA
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 94 ------YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPA 147
Y+ +E G P L++ L Q A+ V++++ L +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD-AIRVVEKLKEGGFSLDLLAYNM 551
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
++ C + +++ +M +G P + +N +I+ + K + E MM+ + G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTP--VIYHSLIRGYCKMEQFDE 265
L P V TY + Y + GE++ A K+ ++ HS + P VIY+ LI + K+ F +
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL-HSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 266 AVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
A+ L EMK VR NV+ Y+ L + L K ET KL E+ E
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKT-QGETLLKLMDEMVEQS 717
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 130/297 (43%), Gaps = 14/297 (4%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCE------PNSFTYYLTIEALYRRSAFDWALPVCQ 60
L+ + K + ALEVFE+ + + +S + I+ L + A +
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 61 KM-LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
+M L+ R +P + L+ C+ KL+ A V E P + +N +V + +
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 120 ---NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
N V +++ KE G + + + ++ A C V +V A +M+ G P
Sbjct: 455 HGLNMAVVFFMDMEKE--GVKGNVVT--YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
++ +I+G C+ A+ +++ L+ G D+ Y ++ + + E ++L
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ +K+ + Y++LI + K + F+ +++ +M+E G+ V Y +I + C
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 89 EAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAV 148
EA + +E G P + ++ L+ L + + V A E + G + K + +
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLC-DKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 149 VRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL 208
VR R++D A+++ EM+ +N ++ CK+G+++ +M + + + GL
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVK 268
+PD Y++A+ Y + G++ +A K+L+ K+ V ++ +I+ CK E+ D+A
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 269 LLTEMKEFGVRVNVDEYDKLIQSLC 293
LL EM + G + Y+ ++ C
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHC 359
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 115/278 (41%), Gaps = 6/278 (2%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
L+ L+ S A E F K + F P++ TY + + R A V +ML
Sbjct: 176 LDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEML 235
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+ + + + LL LCK + + +++ LG P + + V
Sbjct: 236 ERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGD-V 294
Query: 124 PLALEVLKEIPGDRRELAKK--RFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
A +VL + R +L F +++ LC+ + V A L+ EMI G P +N
Sbjct: 295 HSAYKVLDRMK--RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYN 352
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
++ +C E+ +A +++ ++ PD +TY ++ G + A +I E ++
Sbjct: 353 SIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSER 412
Query: 242 HSVLTPVIYHSLIRGYCKME-QFDEAVKLLTEMKEFGV 278
T Y +I G + + + +EA + M + G+
Sbjct: 413 KFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 124/292 (42%), Gaps = 2/292 (0%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
E +S +++ A R + A +M++ P + LL LC K + A
Sbjct: 135 EISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQE 194
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+ A G P + LV ++ + A +V E+ + + A++ AL
Sbjct: 195 FFGKAKGFGIVPSAKTYSILVRGWARIRDASG-ARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
C+ DV ++ EM G P F I YC AG++ A +++ ++ L P+V
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
YT+ I +++ A +L+E +K + Y+S++ +C + + A KLL+
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 273 MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGATRALI 324
M + Y+ +++ L ++ ++ A ++ + E Y AT ++
Sbjct: 374 MDRTKCLPDRHTYNMVLK-LLIRIGRFDRATEIWEGMSERKFYPTVATYTVM 424
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Query: 86 KLKEAHAVYKAAIELGKYPPM---PYINFLVAKLSQENETVPLALEVLKEIPGDRRELAK 142
K+++ AV+ E+ K P P + ++ + + V A+EVL E+P E +
Sbjct: 159 KMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDE 218
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
F ++ ALC+ V A +L +M P F ++ G+C+ G+M +A ++
Sbjct: 219 YVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTSLLYGWCRVGKMMEAKYVLVQ 277
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+ G PD+ Y + SGY+N G+M A +L + +++ Y LI+ CK+++
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+EA+K+ EM+ + +V Y L+ C
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 139/309 (44%), Gaps = 3/309 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
LV F+ K A+EV ++ F EP+ + + ++AL + + A + + M
Sbjct: 189 LVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF 248
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+ Y L W C+ K+ EA V E G P + L++ + + A
Sbjct: 249 PVNLRYFTSLLYGW-CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD-A 306
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++L+++ E + +++ALC+V + A ++ +EM + +++G
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+CK G++++ ++ + +GL P TY I + E +++E+ ++
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 426
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
IY+ +IR CK+ + EAV+L EM+E G+ VD + +I L + E ++
Sbjct: 427 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF- 485
Query: 307 AELKENGLY 315
E+ GL+
Sbjct: 486 KEMVTRGLF 494
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 16/297 (5%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
+L+ ++ GK A ++ EPN+ Y + I+AL + + A+ V +M
Sbjct: 291 TNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER 350
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP-MPYINFLVAKLSQENETV 123
+ + L+ CK K+ + + V I+ G P + Y++ +VA ++ E+
Sbjct: 351 YECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA--HEKKESF 408
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
LE+++++ + V+R C++ +V A +L EM +G PG F +
Sbjct: 409 EECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIM 468
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGL--RPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
I G G + +A + K + +RGL T ++ + ++E A+ + K
Sbjct: 469 INGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSK 528
Query: 242 H----SVLTPVIY-HSLI-RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+VL+ I+ H+L +GY K EA EM E D + KL++ L
Sbjct: 529 GACELNVLSWTIWIHALFSKGYEK-----EACSYCIEMIEMDFMPQPDTFAKLMKGL 580
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 16/268 (5%)
Query: 77 LLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGD 136
L+ LC G + E + + K ++ G P L++ + ++ EVL +
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMS-EVLHTM--- 274
Query: 137 RRELAKKRFPA------VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA 190
+A FP+ +++ LC K A + + G P V+ +I G+C+
Sbjct: 275 ---IAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEK 331
Query: 191 GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIY 250
G + A ++ + +G+RP+ + Y V+ G+ GE+ E + T +
Sbjct: 332 GWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSC 391
Query: 251 HSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELK 310
+++I+G+C + DEA ++ M E GV N Y+ LI+ C K E KL+ ELK
Sbjct: 392 NTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFC-KENKVEKGLKLYKELK 450
Query: 311 ENGLYLKG-ATRALIRAVKEMENEVVES 337
GL G A AL+R +K M + V S
Sbjct: 451 ALGLKPSGMAYAALVRNLK-MSDSVATS 477
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Query: 139 ELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVE 198
E +R ++RALC DV +L+ + + G PG V+ +I+G+C+ G E
Sbjct: 210 EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 199 MMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYC 258
++ + + P +Y Y I G + A I + K K V+Y ++IRG+C
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 259 KMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
+ A KL EM + G+R N Y+ +I K + E + E+ NG
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGH-FKRGEISLVEAFYNEMLRNG 383
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 8/264 (3%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
EP+ T + + +L D A + +++ + S P+ Y+ LL LCK K L H
Sbjct: 156 EPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL---HV 212
Query: 93 VYKAAIELGK----YPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAV 148
VY+ E+ P + L+ + ++ + A+ ++ ++ + + +
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCN-SKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 149 VRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL 208
++ C + A + +M +G P +N +I G KAG +E+A +K + G
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVK 268
PD TY + +G GE A +LEE + + Y++L+ G CK D+ ++
Sbjct: 332 EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME 391
Query: 269 LLTEMKEFGVRVNVDEYDKLIQSL 292
L MK GV++ + Y L++SL
Sbjct: 392 LYEMMKSSGVKLESNGYATLVRSL 415
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 1/231 (0%)
Query: 23 VFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLC 82
V E + F +P+ ++ + I+ + A+ + K+ +A P+ + ++ C
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAK 142
K EA VYK E G P N L+ LS+ V A LK + E
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR-VEEARMYLKTMVDAGYEPDT 335
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
+ +++ +CR + A L+ EM A G P + +N ++ G CKA M++ +E+ ++
Sbjct: 336 ATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEM 395
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
++S G++ + YA + G++ A ++ + A S+ Y +L
Sbjct: 396 MKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 91/223 (40%), Gaps = 4/223 (1%)
Query: 77 LLVWLCKG--KKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIP 134
LL C+ + H V + G P + V L E V A +++KE+
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKELT 186
Query: 135 GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD-GPPPGNAVFNFVITGYCKAGEM 193
+ +++ LC+ KD+ + + EM D P F +I C + +
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 194 EQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
+A+ ++ L + G +PD + Y I G+ + A + ++ K++ + Y++L
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
I G K + +EA L M + G + Y L+ +C K
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 155 VKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYT 214
V + A +L+ ++ GP P F +I G+CK GEM++A ++ K++E RG+ PD+
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 215 YAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
Y+ + GY G + K+ +A K L V++ S I Y K A + M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 275 EFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
G+ NV Y LI+ LC +E A ++ ++ + G+
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYE-AFGMYGQILKRGM 422
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 15/264 (5%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSI-PEWYSVGDLLVWLCKGKKLKEAHA 92
PN T+ I +R D A + K+++ R I P+ + L+ K L H
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDL-FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVV--- 149
++ A+ G + V S + + ++ +R L + P VV
Sbjct: 343 LFSQALHKG-------VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 150 ---RALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
+ LC+ + A + +++ G P ++ +I G+CK G + + + +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
G PDV Y V+ G S G M A + + + L V+++SLI G+C++ +FDEA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQ 290
+K+ M +G++ +V + +++
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMR 539
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 115/268 (42%), Gaps = 7/268 (2%)
Query: 15 GKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSV 74
G+ + AL +F + EP++ Y I+A + L + M + +
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 75 GDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVA---KLSQENETVPLALEVLK 131
++ L K ++++A + IE P + N ++ L + +E + E+LK
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI-FELLK 663
Query: 132 EIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAG 191
P + ++ LC+ D+ A ++ M G P + ++ + K+
Sbjct: 664 VTPFGPNTVT---LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
++E + ++ + ++ +G+ P + +Y++I G G ++ A I +A + V Y
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVR 279
LIRGYCK+ + EA L M GV+
Sbjct: 781 ILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 131/313 (41%), Gaps = 4/313 (1%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ N L+ + +L + AL+VF ++ +P+ T+ + + AL + +M
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
P+ + L+ CK K ++ ++ K + +V L +
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL-MQRNKISADIAVCNVVIHLLFKCHR 616
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGP-PPGNAVFN 181
+ A + + + E + ++ C ++ + A+++ E++ P P
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI-FELLKVTPFGPNTVTLT 675
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I CK +M+ A+ M ++ +G +P+ TY + +S ++E + K+ EE ++K
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
+ V Y +I G CK + DEA + + + + +V Y LI+ C K
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC-KVGRLVE 794
Query: 302 AEKLHAELKENGL 314
A L+ + NG+
Sbjct: 795 AALLYEHMLRNGV 807
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 133/350 (38%), Gaps = 42/350 (12%)
Query: 4 LNDLVFS-----FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPV 58
L+ +VFS + K G A V+++ PN TY + I+ L + A +
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 59 CQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQ 118
++L P + L+ CK L+ A+Y+ I++G P + LV LS+
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 119 ENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+ + A+ ++ G L F +++ CR+ A ++ M G P A
Sbjct: 474 QGLMLH-AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSN-------------- 224
F V+ G +E+A+ + + GL PD Y + +
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 225 -----GGEMEAARKILEEAKKKHSV--------------LTP--VIYHSLIRGYCKMEQF 263
++ ++ K H + + P V Y+++I GYC + +
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 264 DEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
DEA ++ +K N LI LC K D + A ++ + + E G
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLC-KNNDMDGAIRMFSIMAEKG 701
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 158 VGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAV 217
+G +L + + G VF+ I Y K+G++ A + K + +G+ P+V TY +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 218 IASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
+ G G + A + + K+ + V Y SLI G+CK L +M + G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 278 VRVNVDEYDKLI-----QSLCLKAMDWET 301
+V Y L+ Q L L AM +
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIAD-GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLL 203
F +++ L + G A L EM G P + FN +I G+CK +++A + K +
Sbjct: 176 FNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM 235
Query: 204 ESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTP--VIYHSLIRGYCKME 261
E PDV TY I G G+++ A +L KK + + P V Y +L+RGYC +
Sbjct: 236 ELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQ 295
Query: 262 QFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ DEAV + +M G++ N Y+ LI+ L
Sbjct: 296 EIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 130/318 (40%), Gaps = 42/318 (13%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ S+ G + ++++F+ + P+ T+ + L +R A + +M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 64 DARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+ P+ Y+ L+ CK + EA ++K +EL P
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKD-MELYHCNP----------------- 242
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMI--ADGPPPGNAVF 180
+V+ + ++ LCR V A ++ M+ A P +
Sbjct: 243 -----DVVT-------------YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSY 284
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
++ GYC E+++AV + + SRGL+P+ TY + G S + + IL
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGND 344
Query: 241 KHSVLTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
+ P ++ LI+ +C D A+K+ EM + + Y LI++LC++ +
Sbjct: 345 AFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRN-E 403
Query: 299 WETAEKLHAELKENGLYL 316
++ AE L EL E + L
Sbjct: 404 FDRAETLFNELFEKEVLL 421
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 129/331 (38%), Gaps = 45/331 (13%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFE-VFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
N L+ K G+ A ++F++ + P+S+T+ I + S D A + + M
Sbjct: 176 FNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM 235
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
P+ + ++ LC+ K+K AH N L L + +
Sbjct: 236 ELYHCNPDVVTYNTIIDGLCRAGKVKIAH------------------NVLSGMLKKATDV 277
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
P + + +VR C +++ A + +M++ G P +N
Sbjct: 278 HPNVVS----------------YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 183 VITGYCKAGEMEQAVEMMKLLES--RGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+I G +A ++ +++ PD T+ ++ + + G ++AA K+ +E
Sbjct: 322 LIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 381
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDE-------YDKLIQSLC 293
Y LIR C +FD A L E+ E V + DE Y+ + + LC
Sbjct: 382 MKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLC 441
Query: 294 LKAMDWETAEKLHAELKENGLYLKGATRALI 324
+ AEK+ +L + G+ + + LI
Sbjct: 442 ANG-KTKQAEKVFRQLMKRGVQDPPSYKTLI 471
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 119/305 (39%), Gaps = 19/305 (6%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
Y N L+ F K A +F+ E++ C P+ TY I+ L R A V
Sbjct: 210 YTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSG 269
Query: 62 MLDARS--IPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
ML + P S L+ C +++ EA V+ + G P N L+ LS+
Sbjct: 270 MLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEA 329
Query: 120 NETVPLALEVLKEIPGDRRELAK-----KRFPAVVRALCRVKDVGTAKQLMLEMIADGPP 174
+ E+ + G F +++A C + A ++ EM+
Sbjct: 330 HRYD----EIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH 385
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMK-------LLESRGLRPDVYTYAVIASGYSNGGE 227
P +A ++ +I C E ++A + LL +P Y + G+
Sbjct: 386 PDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGK 445
Query: 228 MEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDK 287
+ A K+ + K+ V P Y +LI G+C+ +F A +LL M +++ Y+
Sbjct: 446 TKQAEKVFRQLMKR-GVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYEL 504
Query: 288 LIQSL 292
LI L
Sbjct: 505 LIDGL 509
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 48/291 (16%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P++ T+ + I+A D A+ V Q+ML+ + P+ S L+ LC + A +
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 94 YKAAIE----LGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVV 149
+ E LGK +E PLA + +
Sbjct: 411 FNELFEKEVLLGK-----------------DECKPLA----------------AAYNPMF 437
Query: 150 RALCRVKDVGTAKQLMLEMIADG--PPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
LC A+++ +++ G PP + +ITG+C+ G+ + A E++ L+ R
Sbjct: 438 EYLCANGKTKQAEKVFRQLMKRGVQDPPS---YKTLITGHCREGKFKPAYELLVLMLRRE 494
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
PD+ TY ++ G GE A L+ + + +HS++ K + +E+
Sbjct: 495 FVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESF 554
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKG 318
L+T M E +R N+D ++++ L + +A+K A L LY G
Sbjct: 555 CLVTLMLEKRIRQNIDLSTQVVRLL------FSSAQKEKAFLIVRLLYDNG 599
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 2/278 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N L+ + K AL V ++ E PN TY I R A + +
Sbjct: 238 IFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR 297
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
++ D + + L+ C+ + EA + + G P + N ++ KL ++
Sbjct: 298 EIKDDVTANH-VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDG 356
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ A +L E+ G + E ++ A C+++D+ +A ++ +MI G +
Sbjct: 357 R-IREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSY 415
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+I G+CK E+E A E + + +G P TY+ + G+ N + + K+LEE +K
Sbjct: 416 KALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
+ +Y LIR CK+EQ D A L M++ G+
Sbjct: 476 RGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 146/316 (46%), Gaps = 9/316 (2%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
++ + L+ ++K G ++ VFE+ +P+ + + +L ++ D + +K
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 62 MLDARSIPEWYSVGDLLVWLC-KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
M+ + + V ++LV C K ++A + E G +P + N L++ +++
Sbjct: 194 MVKLGVVANIH-VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 121 ETVPLALEVLKEIPGDRRELAKK--RFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
AL V + +R +A + + + R + A +L E I D +
Sbjct: 253 MHFE-ALSVQDRM--ERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHV 308
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+ +I GYC+ ++++A+ + +++ESRG P V TY I G + A ++L E
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
K + ++LI YCK+E AVK+ +M E G+++++ Y LI C K ++
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC-KVLE 427
Query: 299 WETAEKLHAELKENGL 314
E A++ + E G
Sbjct: 428 LENAKEELFSMIEKGF 443
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 127/287 (44%), Gaps = 2/287 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N + FS+ G+ + A +F + + N TY I+ R + D AL + + M
Sbjct: 277 NSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMES 335
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P + +L LC+ +++EA+ + P N L+ + + V
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS 395
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A++V K++ +L + A++ C+V ++ AK+ + MI G PG A +++++
Sbjct: 396 -AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLV 454
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G+ + ++ ++++ E RGL DV Y + +++ A+ + E +KK V
Sbjct: 455 DGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLV 514
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
VI+ ++ Y + + EA L M + VN+ Y + S
Sbjct: 515 GDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISAS 561
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%)
Query: 169 IADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEM 228
+++ P + VF++++ Y KAG + ++ + + + S GL+P + V+ +
Sbjct: 125 VSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLT 184
Query: 229 EAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
+ KI ++ K V +Y+ L+ K ++A KLL+EM+E GV ++ Y+ L
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 289 IQSLCLKAMDWE 300
I C K+M +E
Sbjct: 245 ISVYCKKSMHFE 256
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 155 VKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYT 214
V + A +L+ ++ GP P F +I G+CK GEM++A ++ K++E RG+ PD+
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 215 YAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
Y+ + GY G + K+ +A K L V++ S I Y K A + M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 275 EFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
G+ NV Y LI+ LC +E A ++ ++ + G+
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYE-AFGMYGQILKRGM 422
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 15/264 (5%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSI-PEWYSVGDLLVWLCKGKKLKEAHA 92
PN T+ I +R D A + K+++ R I P+ + L+ K L H
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDL-FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVV--- 149
++ A+ G + V S + + ++ +R L + P VV
Sbjct: 343 LFSQALHKG-------VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 150 ---RALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
+ LC+ + A + +++ G P ++ +I G+CK G + + + +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
G PDV Y V+ G S G M A + + + L V+++SLI G+C++ +FDEA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQ 290
+K+ M +G++ +V + +++
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMR 539
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 125/292 (42%), Gaps = 25/292 (8%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ N L+ + +L + AL+VF ++ +P+ T+ + AF C+ M
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAF------CKHM 551
Query: 63 -----------LDARSIPEWYSVGDLLVWLC-KGKKLKEAHAVYKAAIELGKYPPMPYIN 110
+ I +V ++++ L K ++++A + IE P + N
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 111 FLVA---KLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLE 167
++ L + +E + E+LK P + ++ LC+ D+ A ++
Sbjct: 612 TMICGYCSLRRLDEAERI-FELLKVTPFGPNTVT---LTILIHVLCKNNDMDGAIRMFSI 667
Query: 168 MIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGE 227
M G P + ++ + K+ ++E + ++ + ++ +G+ P + +Y++I G G
Sbjct: 668 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 727
Query: 228 MEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVR 279
++ A I +A + V Y LIRGYCK+ + EA L M GV+
Sbjct: 728 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 134/324 (41%), Gaps = 19/324 (5%)
Query: 4 LNDLVFS-----FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPV 58
L+ +VFS + K G A V+++ PN TY + I+ L + A +
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 59 CQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQ 118
++L P + L+ CK L+ A+Y+ I++G P + LV LS+
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 119 ENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+ + A+ ++ G L F +++ CR+ A ++ M G P A
Sbjct: 474 QGLMLH-AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 179 VFNFVI------TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAAR 232
F V+ +CK + +++ L++ + D+ V+ +E A
Sbjct: 533 TFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 592
Query: 233 KI---LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLI 289
K L E K + ++T Y+++I GYC + + DEA ++ +K N LI
Sbjct: 593 KFFNNLIEGKMEPDIVT---YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 290 QSLCLKAMDWETAEKLHAELKENG 313
LC K D + A ++ + + E G
Sbjct: 650 HVLC-KNNDMDGAIRMFSIMAEKG 672
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGP-PPGNAVFNFVITGYCKAGEMEQAVEMMKLL 203
+ ++ C ++ + A+++ E++ P P +I CK +M+ A+ M ++
Sbjct: 610 YNTMICGYCSLRRLDEAERI-FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 668
Query: 204 ESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQF 263
+G +P+ TY + +S ++E + K+ EE ++K + V Y +I G CK +
Sbjct: 669 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 728
Query: 264 DEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
DEA + + + + +V Y LI+ C K A L+ + NG+
Sbjct: 729 DEATNIFHQAIDAKLLPDVVAYAILIRGYC-KVGRLVEAALLYEHMLRNGV 778
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/310 (18%), Positives = 116/310 (37%), Gaps = 5/310 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
+ L+ F K G ++ ++E P+ Y + ++ L ++ A+ KML
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV- 123
L+ C+ + EA V++ G P + ++ E+
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 124 ----PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ L++ + ++ V+ L + + A + +I P
Sbjct: 550 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N +I GYC +++A + +LL+ P+ T ++ +M+ A ++
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+K S V Y L+ + K + + KL EM+E G+ ++ Y +I LC +
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 300 ETAEKLHAEL 309
E H +
Sbjct: 730 EATNIFHQAI 739
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 158 VGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAV 217
+G +L + + G VF+ I Y K+G++ A + K + +G+ P+V TY +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 218 IASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
+ G G + A + + K+ + V Y SLI G+CK L +M + G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 278 VRVNVDEYDKLI-----QSLCLKAMDWET 301
+V Y L+ Q L L AM +
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 145/358 (40%), Gaps = 57/358 (15%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM- 62
LN ++ K+ K A E+ + +F+C+P TY Y+ A V + M
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 63 ---------------------------------LDARSI-PEWYSVGDLLVWLCKGKKLK 88
L AR + P + G L+ C +
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 89 EAHAVYKAAIELG---KYPPMPYINFLVAKLSQENETVPLALEVLK---EIPGDRRELAK 142
+A+A IE G I + +L + +E L +++ +PG + +
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ---SL 685
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPP-----PGNAVFNFVITGYCKAGEMEQAV 197
K F C Q + E + + P P N V+N I G CKAG++E A
Sbjct: 686 KEFLEASATTC------LKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDAR 739
Query: 198 EMMK-LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRG 256
++ LL S PD YTY ++ G + G++ A + +E K + V Y++LI+G
Sbjct: 740 KLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKG 799
Query: 257 YCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
CK+ D A +LL ++ + G+ N Y+ LI L +K+ + A +L ++ E GL
Sbjct: 800 LCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL-VKSGNVAEAMRLKEKMIEKGL 856
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 148/335 (44%), Gaps = 36/335 (10%)
Query: 15 GKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ----------KMLD 64
G+ AL V+++ F+ P+ FT + + A R D A+ + ++
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 65 ARSIPEWYS-VGDL-----LVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQ 118
S+ Y+ +GD+ ++ L + + Y + I+ + L +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIK----------GYCKKGLME 313
Query: 119 ENETVPLALEVLKEIPGDRRELAKKR-FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
E E V E+LKE ++ +A + + ++ CR + A ++ MI G
Sbjct: 314 EAEHV---FELLKE----KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNT 366
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
+ N +I GYCK+G++ +A ++ + L+PD +TY + GY G ++ A K+ ++
Sbjct: 367 TICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQ 426
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
+K V T + Y+ L++GY ++ F + + L M + GV + L+++L K
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL-FKLG 485
Query: 298 DWETAEKLHAELKENGLYLKGAT-RALIRAVKEME 331
D+ A KL + GL T +I + +ME
Sbjct: 486 DFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 127/294 (43%), Gaps = 9/294 (3%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N L+ + K G+ A ++F + + +P+ TY ++ R D AL +C +M
Sbjct: 368 ICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVA---KLSQE 119
+P + LL + + +++K ++ G + L+ KL
Sbjct: 428 CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDF 487
Query: 120 NETVPLALEVL-KEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
NE + L VL + + D L ++ LC+++ V AK+++ + P
Sbjct: 488 NEAMKLWENVLARGLLTDTITL-----NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ 542
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+ + GY K G +++A + + +E +G+ P + Y + SG + ++ E
Sbjct: 543 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 602
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ + T Y +LI G+C + D+A EM E G+ +NV+ K+ SL
Sbjct: 603 RARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 115/284 (40%), Gaps = 1/284 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ ++ +G + V N TY I+ ++ + A V + + +
Sbjct: 265 NSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE 324
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+ + + + G L+ C+ ++++A V+ IE+G N L+ + + V
Sbjct: 325 KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A ++ + + + +V CR V A +L +M P +N ++
Sbjct: 385 -AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
GY + G + + K++ RG+ D + + + G+ A K+ E + +
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
+ + +I G CKME+ +EA ++L + F + V Y L
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 131/296 (44%), Gaps = 5/296 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N LV + + G AL++ ++ + P TY + ++ R AF L + + ML
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+ S LL L K EA +++ + G +N +++ L + E V
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM-EKVN 523
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A E+L + R + A + + A+ +V ++ A + M G P ++N +I
Sbjct: 524 EAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLI 583
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
+G K + + +++ L +RGL P V TY + +G+ N G ++ A E +K
Sbjct: 584 SGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGIT 643
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRV----NVDEYDKLIQSLCLKA 296
L I + ++++ DEA LL ++ +F + + ++ E+ + + CLK
Sbjct: 644 LNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKT 699
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM---- 62
+V FSK G +AA F++ + N+ Y I A + + A + ++M
Sbjct: 385 IVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEG 444
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+DA I ++++ D + KK V+K E G P + L+ L +
Sbjct: 445 IDA-PIAIYHTMMDGYTMVADEKK---GLVVFKRLKECGFTPTVVTYGCLI-NLYTKVGK 499
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ ALEV + + + + K + ++ ++KD A + +M+ +G P ++N
Sbjct: 500 ISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I+ +C G M++A++ +K ++ RP T+ I GY+ G+M + ++ + ++
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
V T ++ LI G + Q ++AV++L EM GV N Y K++Q
Sbjct: 620 CVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%)
Query: 141 AKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMM 200
++ F +V+ R D+ A++ M A G P + ++ +I Y +M++A+ +
Sbjct: 308 SRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCV 367
Query: 201 KLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKM 260
+ ++ G+ + TY+VI G+S G EAA +EAK+ H L IY +I +C+
Sbjct: 368 RKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQT 427
Query: 261 EQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+ A L+ EM+E G+ + Y ++ + A
Sbjct: 428 CNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 128/308 (41%), Gaps = 2/308 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ ++K+GK ALEV + + N TY + I + + A V + M+
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ +++ C + A K +L P ++ ++ + + +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD-MRRS 608
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
LEV + F ++ L + + A +++ EM G + ++ G
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
Y G+ +A E L++ GL D++TY + G M++A + +E ++
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
+Y+ LI G+ + EA L+ +MK+ GV+ ++ Y I S C KA D A +
Sbjct: 729 SFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI-SACSKAGDMNRATQTI 787
Query: 307 AELKENGL 314
E++ G+
Sbjct: 788 EEMEALGV 795
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 130/319 (40%), Gaps = 32/319 (10%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDA- 65
++ ++K G + +LEVF+ C P T+ I L + + A+ + +M A
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 66 ---------RSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKL 116
+ + + SVGD GK + + +++ + Y L K
Sbjct: 655 VSANEHTYTKIMQGYASVGDT------GKAFEYFTRLQNEGLDVDIFT---YEALL--KA 703
Query: 117 SQENETVPLALEVLKEIPGDRRELAKKRF--PAVVRALCRVKDVGTAKQLMLEMIADGPP 174
++ + AL V KE+ R + + F ++ R DV A L+ +M +G
Sbjct: 704 CCKSGRMQSALAVTKEMSA--RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
P + I+ KAG+M +A + ++ +E+ G++P++ TY + G++ E A
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 235 LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA------VKLLTEMKEFGVRVNVDEYDKL 288
EE K +YH L+ EA + + EM E G+ V++
Sbjct: 822 YEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHW 881
Query: 289 IQSLC-LKAMDWETAEKLH 306
+ LC ++A E E L
Sbjct: 882 SKCLCKIEASGGELTETLQ 900
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 123/281 (43%), Gaps = 15/281 (5%)
Query: 18 KAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDL 77
+A + FEK +P+ + L ++ RR A ++M P L
Sbjct: 295 QAVISAFEKIS----KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 350
Query: 78 LVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN--ETVPLALEVLKEIPG 135
+ G+ + EA + + E G + + +V S+ E + K I
Sbjct: 351 IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI-- 408
Query: 136 DRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQ 195
+ L + ++ A C+ ++ A+ L+ EM +G A+++ ++ GY + ++
Sbjct: 409 -HKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKK 467
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA---RKILEEAKKKHSVLTPVIYHS 252
+ + K L+ G P V TY + + Y+ G++ A ++++E KH++ T Y
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT---YSM 524
Query: 253 LIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+I G+ K++ + A + +M + G++ +V Y+ +I + C
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFC 565
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Query: 146 PAVVRALC------RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEM 199
P VV C +V + A ++ M +G ++ +I G+ K + A +
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 200 MKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCK 259
+ + G++PDV Y I S + G M+ A + ++E +K T + +I GY K
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 260 MEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
++++ M+ G V ++ LI L K
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK 637
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 132/301 (43%), Gaps = 5/301 (1%)
Query: 14 LGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYS 73
L K + A +VFE + C + +TY + I + R D A+ + +M+
Sbjct: 248 LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVG 307
Query: 74 VGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEI 133
L+ L KGK + +A V+ +E G P + L+ L E + V L+ + EI
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLV--RLDGVVEI 365
Query: 134 PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEM 193
+R + + + +VR L ++ V A +L +M + + ++ C AG+
Sbjct: 366 --SKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 194 EQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
+A+EM+ + +G+ D Y + S ++ + E+ KK Y+ L
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
I + ++ + DEA+ + E++ + ++ Y+ LI L K D + A E++E G
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG-KNGDVDEAHVRFKEMQEKG 542
Query: 314 L 314
L
Sbjct: 543 L 543
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 152/331 (45%), Gaps = 26/331 (7%)
Query: 14 LGKGKA---ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAF---DWALPVCQKMLDARS 67
L KGK A++VF + C PN +TY L + L D + + ++ + +
Sbjct: 315 LAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM-TQG 373
Query: 68 IPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPM----PYINFLVAKLSQENETV 123
I + L+ L K + EAH ++ ++ +P Y++ L L +T+
Sbjct: 374 IYSY-----LVRTLSKLGHVSEAHRLF---CDMWSFPVKGERDSYMSML-ESLCGAGKTI 424
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
A+E+L +I + V AL ++K + L +M DGP P +N +
Sbjct: 425 E-AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I + + GE+++A+ + + LE +PD+ +Y + + G+++ A +E ++K
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAE 303
V Y +L+ + K E+ + A L EM G + N+ Y+ L+ CL+ + TAE
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD--CLEK-NGRTAE 600
Query: 304 --KLHAELKENGLYLKGATRALIRAVKEMEN 332
L++++K+ GL T ++ ++ + +
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVLERLQSVSH 631
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 42/292 (14%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALY---RRSAFDWALPVCQ 60
N L+ + + G + +E F K + F P +Y + +L + DW V +
Sbjct: 190 FNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDW---VYE 246
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+ML+ P+ + ++ + K + + ++ G P + N L+ L+ N
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ PLA A L+ M G PG F
Sbjct: 307 K--PLA----------------------------------ALNLLNHMREVGVEPGVIHF 330
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+I G +AG++E M G PDV Y V+ +GY +GGE+E A ++ +E +
Sbjct: 331 TTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTE 390
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
K + Y+S+IRG+C +F EA LL EM+ G N Y L+ +L
Sbjct: 391 KGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 163 QLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGY 222
+L+ EM+ DG P +N ++ + A+ ++ + G+ P V + + G
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 223 SNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNV 282
S G++EA + ++E K V Y +I GY + ++A ++ EM E G NV
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 283 DEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
Y+ +I+ C+ A ++ A L E++ G
Sbjct: 398 FTYNSMIRGFCM-AGKFKEACALLKEMESRG 427
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 3/267 (1%)
Query: 68 IPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLAL 127
IP+ + + L KG L E ++ + G P LV L +
Sbjct: 352 IPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNA-QRFSEGD 410
Query: 128 EVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGY 187
LK++ D + + AV+ LC+ + + A + EM G P FN ++GY
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 188 CKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTP 247
G++++ +++ L G +PDV T+++I + E++ A +E +
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 248 VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHA 307
+ Y+ LIR C D +VKL +MKE G+ ++ Y+ IQS C K + AE+L
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFC-KMRKVKKAEELLK 589
Query: 308 ELKENGLYLKGAT-RALIRAVKEMENE 333
+ GL T LI+A+ E E
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRE 616
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 134/330 (40%), Gaps = 46/330 (13%)
Query: 2 YILNDLVFS--FSKLGKGKAALE---VFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWAL 56
YI + F+ S L KG +E +F+ F +P Y + ++AL F
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 57 PVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKL 116
++M + YS ++ LCK ++++ A + G P + N ++
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 117 SQENET--VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPP 174
S + V LE L + G + ++ F ++ LCR K++ A EM+ G
Sbjct: 471 SVRGDVKKVHGVLEKLL-VHGFKPDVIT--FSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
P +N +I C G+ +++V++ ++ GL PD+Y Y
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAY------------------- 568
Query: 235 LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
++ I+ +CKM + +A +LL M G++ + Y LI++L
Sbjct: 569 ----------------NATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 295 KAMDWETAEKLHAELKENGLYLKGATRALI 324
+ E A ++ + ++ +G T+ L+
Sbjct: 613 SGRESE-AREMFSSIERHGCVPDSYTKRLV 641
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%)
Query: 141 AKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMM 200
+ + + AV+ AL + + A +M +DG P +N +I G CK G +++A+ ++
Sbjct: 179 STRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLV 238
Query: 201 KLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKM 260
K +E G RP+V+TY ++ G+ G ++ A K LE + + + + G +
Sbjct: 239 KQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRC 298
Query: 261 EQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
+A ++L E + YD ++ L +M ET + L
Sbjct: 299 LPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLR 344
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 72/150 (48%)
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
L++E+LKEI ++ + ++ + R+ + ++ G P ++N VI
Sbjct: 128 LSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVI 187
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
K+ ++ A + + S G +PD +TY ++ G G ++ A +++++ +++ +
Sbjct: 188 DALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNR 247
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
Y LI G+ + DEA+K L M+
Sbjct: 248 PNVFTYTILIDGFLIAGRVDEALKQLEMMR 277
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 141/305 (46%), Gaps = 18/305 (5%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ ++++ G+ A E+ E+ P+SFTY + I + + KML+
Sbjct: 623 MINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG 682
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELG-KYPPMPYINFLVA---KLSQENET 122
P L+ K K + ++ E K+ + YI L ++++ +
Sbjct: 683 LSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKR 742
Query: 123 VPLALEVLKEIPGDRRELAKK-RFPAVVRALCRVKDVGTAKQLMLEMIAD---GPPPGNA 178
+V+ E PG + L + R +V + + G+ K +E+I P
Sbjct: 743 -----QVIVE-PGKEKLLQRLIRTKPLVSIPSSLGNYGS-KSFAMEVIGKVKKSIIPNLY 795
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+ N +ITGYC AG +++A ++ ++ G+ P++ TY ++ + G++E+A + E
Sbjct: 796 LHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGT 855
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
+ V+Y +L++G C ++ +A+ L+ EM++ G+ N D Y+KL+Q LC +
Sbjct: 856 NCEPD---QVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLT 912
Query: 299 WETAE 303
E +
Sbjct: 913 MEAVK 917
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 156/373 (41%), Gaps = 54/373 (14%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ +L+F F K G A+++ + P+ TY++ ++ L + +A+ + Q
Sbjct: 378 VHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQ 437
Query: 61 KMLD---------------------------ARSIPEWYSVGDLLVW--LCKGKKLKEAH 91
+LD AR +VG +V LC + A
Sbjct: 438 SILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAAL 497
Query: 92 AVYKAAIELGKYP-PMPYINFLVAKLSQENETVPLA-----LEVLKEIPGDRRELAKKRF 145
+ + + LG P P Y N ++ L QEN LA ++ L +P +
Sbjct: 498 SRIEKMVNLGCTPLPFSY-NSVIKCLFQENIIEDLASLVNIIQELDFVPD------VDTY 550
Query: 146 PAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMM-KLLE 204
VV LC+ D A ++ M G P A+++ +I K G + +A E K+LE
Sbjct: 551 LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
S G++PD Y ++ + Y+ G ++ A +++EE K + Y LI G+ KM +
Sbjct: 611 S-GIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMME 669
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL---------Y 315
+ + L +M E G+ NV Y LI LK D++ + L + EN +
Sbjct: 670 KGCQYLDKMLEDGLSPNVVLYTALIGHF-LKKGDFKFSFTLFGLMGENDIKHDHIAYITL 728
Query: 316 LKGATRALIRAVK 328
L G RA+ R K
Sbjct: 729 LSGLWRAMARKKK 741
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 117/285 (41%), Gaps = 17/285 (5%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+L+ +VF KL + A ++ P+ + L ++ L + F A C +
Sbjct: 133 VLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFH-CFEQ 191
Query: 63 LDARSIPEW-YSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMP-------YINFLVA 114
+ R W + L LC L EA + + + P +P + F
Sbjct: 192 VKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMP-LPVNLYKSLFYCFCKR 250
Query: 115 KLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPP 174
+ E E + +EV D + K + +++ C+ ++ A +L L M+
Sbjct: 251 GCAAEAEALFDHMEV------DGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFE 304
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
+FN +I G+ K G +++ M + +G++ +V+TY ++ Y G ++ A ++
Sbjct: 305 LDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL 364
Query: 235 LEEAKKKHSVLTPV-IYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
+ V Y +LI G+ K D+AV LL M + G+
Sbjct: 365 FVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGI 409
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 8/286 (2%)
Query: 7 LVFSFSKLGKGKAALEVF-EKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDA 65
++ S+ K G AL +F N Y I Y++ D A+ + +MLD
Sbjct: 348 MIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDN 407
Query: 66 RSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPL 125
+P+ + LL L K +LK A + ++ ++ G P I+ L + + E++
Sbjct: 408 GIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL-GNIEVKVESL-- 464
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
L EI LA V ALC ++ A + +M+ G P +N VI
Sbjct: 465 ----LGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIK 520
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
+ +E ++ +++ PDV TY ++ + + +AA I++ ++
Sbjct: 521 CLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRP 580
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
T IY S+I K + EA + +M E G++ + Y +I +
Sbjct: 581 TVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINT 626
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 98/236 (41%), Gaps = 4/236 (1%)
Query: 60 QKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
Q+++ +P+ + ++ L K ++ EA A I G P + +V +L +
Sbjct: 120 QRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQ 179
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLM--LEMIADGPPPGN 177
+ + A +++ L + + LC + A ++ L + P P N
Sbjct: 180 DRFLE-AFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVN 238
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
++ + +CK G +A + +E G D Y + Y M A ++
Sbjct: 239 -LYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLR 297
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
++ L P I+++LI G+ K+ D+ + ++M + GV+ NV Y +I S C
Sbjct: 298 MVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYC 353
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 12/287 (4%)
Query: 12 SKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEW 71
+++G G L++ + V PN+ Y + AL + A + +M + P
Sbjct: 196 NRIGDGFKLLQIMKTSGV---APNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PND 248
Query: 72 YSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLK 131
+ L+ C +KL ++ + + LG P + + ++ L E V ALEVL+
Sbjct: 249 VTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGR-VSEALEVLE 307
Query: 132 EIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAG 191
+ ++ +V+ C + + A++ +EM G P +N +I GYC G
Sbjct: 308 RVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVG 367
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI-- 249
++ A++ +++ +R + T+ + G S GG + KILE + +V I
Sbjct: 368 MLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP 427
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
Y+ +I G+ K ++++A++ L +M++ R VD KLI SLC K
Sbjct: 428 YNCVIYGFYKENRWEDALEFLLKMEKLFPRA-VDRSFKLI-SLCEKG 472
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 42/196 (21%)
Query: 141 AKKRFPAVVRALCRVKDVGTAKQLMLEM-IADGPPPGNAVFNFVITGYCKAGEMEQAVEM 199
++ + A+ LC + T QL+ EM + G PP +A+F +I G+ +A +++ + +
Sbjct: 75 SRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISV 134
Query: 200 MKLLESRGLRP-----------------------------------DVYTYAVIASGYSN 224
+ L+ G++P DVYTY ++ G S
Sbjct: 135 VDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSL 194
Query: 225 GGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKE---FGVRVN 281
+ K+L+ K V+Y++L+ CK + A L++EMKE +
Sbjct: 195 TNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNIL 254
Query: 282 VDEY---DKLIQSLCL 294
+ Y KLIQS+ L
Sbjct: 255 ISAYCNEQKLIQSMVL 270
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 127/326 (38%), Gaps = 69/326 (21%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N LV + LGK + A F + E PN TY L I D AL M
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 65 ARSIPEWYSVGDLLVWLCKGKK----------LKEAHAVYKAAIELGKYPPMPYINFLVA 114
+ + L+ L G + ++++ V+ A I+ PY N ++
Sbjct: 382 DAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID-------PY-NCVIY 433
Query: 115 KLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVR------ALCRVKDVGTAKQLMLEM 168
+EN ALE L ++ +K FP V +LC + K +M
Sbjct: 434 GFYKENRWED-ALEFLLKM--------EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQM 484
Query: 169 IADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEM 228
I +G P V + +I Y + G++E+++E++ + +RG P T
Sbjct: 485 IGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSST-------------- 530
Query: 229 EAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
++++I G+CK ++ +K + +M E G + + Y+ L
Sbjct: 531 ---------------------FNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 289 IQSLCLKAMDWETAEKLHAELKENGL 314
++ LC+K D + A L + + E +
Sbjct: 570 LEELCVKG-DIQKAWLLFSRMVEKSI 594
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 150/334 (44%), Gaps = 14/334 (4%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVF-EKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVC 59
M+ N L+ + KLG+ A ++ E + P TY + ++AL + D A+ +
Sbjct: 118 MWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIEL- 176
Query: 60 QKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
K L +R PE + L+ LCK +++ + + + G Y P + K+ +
Sbjct: 177 FKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG-YTPNAVTYTTMLKMYFK 235
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ + L++ ++ + AVV AL + A + M E++ G + V
Sbjct: 236 TKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIV 295
Query: 180 -FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+N ++ Y K G ++ ++++ +E +GL+PD YT+ +I +G N G A K L
Sbjct: 296 SYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACI 355
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDE--YDKLIQSLCLKA 296
+ + V + LI G CK D A++L M+ VR DE Y ++ +LC K
Sbjct: 356 GEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME---VR---DEFTYTSVVHNLC-KD 408
Query: 297 MDWETAEKLHAELKENGLYL-KGATRALIRAVKE 329
A KL G+ + A RA++ ++E
Sbjct: 409 GRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRE 442
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 10/185 (5%)
Query: 130 LKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCK 189
L + PG ++ K V +LC+ +++ A+ L+++ I G P +N +I GY +
Sbjct: 5 LMKFPG----ISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTR 60
Query: 190 AGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI 249
+++A + + + G+ PDV TY + SG + + ++ +E HS L+P +
Sbjct: 61 FIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM--LHSGLSPDM 118
Query: 250 --YHSLIRGYCKMEQFDEAVKLLTE-MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
Y++L+ Y K+ + EA K+L E + G+ +D Y+ L+ +LC K+ + A +L
Sbjct: 119 WSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC-KSGHTDNAIELF 177
Query: 307 AELKE 311
LK
Sbjct: 178 KHLKS 182
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 6/248 (2%)
Query: 69 PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP-MPYINFLVAKLSQENETVPLAL 127
P+ Y G LL LCK +KEA V++ E K+PP + Y L+ +E + + A
Sbjct: 200 PDEYVFGCLLDALCKNGSVKEASKVFEDMRE--KFPPNLRYFTSLLYGWCREGKLME-AK 256
Query: 128 EVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGY 187
EVL ++ E F ++ + A LM +M G P + +I
Sbjct: 257 EVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Query: 188 CKA-GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
C+ M++A+ + +E G D+ TY + SG+ G ++ +L++ +KK + +
Sbjct: 317 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 376
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
V Y ++ + K EQF+E ++L+ +MK G ++ Y+ +I+ C K + + A +L
Sbjct: 377 QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC-KLGEVKEAVRLW 435
Query: 307 AELKENGL 314
E++ NGL
Sbjct: 436 NEMEANGL 443
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 131/287 (45%), Gaps = 3/287 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ F+ K A+EV ++ + EP+ + + ++AL + + A V + M + +
Sbjct: 173 LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-K 231
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P LL C+ KL EA V E G P + L++ + + A
Sbjct: 232 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD-A 290
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRV-KDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
+++ ++ E + +++ALCR K + A ++ +EM G + +I+
Sbjct: 291 YDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALIS 350
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
G+CK G +++ ++ + +G+ P TY I + + E +++E+ K++
Sbjct: 351 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP 410
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+IY+ +IR CK+ + EAV+L EM+ G+ VD + +I
Sbjct: 411 DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 123/301 (40%), Gaps = 18/301 (5%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYR-RSAFDWALPVCQK 61
+ +L+ ++ GK A ++ EPN Y + I+AL R D A+ V +
Sbjct: 273 VFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVE 332
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP-MPYINFLVAKLSQEN 120
M + + L+ CK + + ++V + G P + Y+ +VA ++
Sbjct: 333 MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVA--HEKK 390
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
E LE+++++ + V+R C++ +V A +L EM A+G PG F
Sbjct: 391 EQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTF 450
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGL--RPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+I G+ G + +A K + SRG+ P T + + ++E A+ +
Sbjct: 451 VIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCI 510
Query: 239 KKKH-------SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
K S T I+ +G+ K EA +M E + + Y KL++
Sbjct: 511 SNKTSSCELNVSAWTIWIHALYAKGHVK-----EACSYCLDMMEMDLMPQPNTYAKLMKG 565
Query: 292 L 292
L
Sbjct: 566 L 566
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPP---PGNAVFNFVITGYCKAGEMEQAVEMMKLL 203
++V L +++ G L+ EM P P +F ++ + A +++AVE++ +
Sbjct: 136 SMVMILSKMRQFGAVWGLIEEMRKTNPELIEP--ELFVVLMRRFASANMVKKAVEVLDEM 193
Query: 204 ESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK----------------------- 240
GL PD Y + + G ++ A K+ E+ ++
Sbjct: 194 PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLM 253
Query: 241 ---------KHSVLTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLI 289
K + L P V++ +L+ GY + +A L+ +M++ G NV+ Y LI
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 290 QSLCLKAMDWETAEKLHAELKENG 313
Q+LC + A ++ E++ G
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYG 337
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 16/316 (5%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKF-EVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ F K K A+E++++ E PN T+ + I L + D L + ++M
Sbjct: 223 NILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMK 282
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVY------KAAIELGKYPPMPYINFLVAKLS 117
+ Y+ L+ LC + +A +V+ KA+I++ Y M K+
Sbjct: 283 QNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIK 342
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
+ E L I + + + +++ L + A + M A G
Sbjct: 343 ESLE--------LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
+ I G C G + +A+ +M+ +ES G DVY YA I +E A +++E
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
K L + ++LI G + + EA L EM + G R V Y+ LI LC KA
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC-KAG 513
Query: 298 DWETAEKLHAELKENG 313
+ A E+ ENG
Sbjct: 514 KFGEASAFVKEMLENG 529
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 120/257 (46%), Gaps = 1/257 (0%)
Query: 38 TYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAA 97
TY + I L + AL V Q++ + + Y+ ++ LCK K+L+EA + K
Sbjct: 396 TYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Query: 98 IELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKD 157
+ G N L+ L +++ + L+E+ + + ++ LC+
Sbjct: 456 SKHGVELNSHVCNALIGGLIRDSRLGEASF-FLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 158 VGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAV 217
G A + EM+ +G P ++ ++ G C+ +++ A+E+ GL DV + +
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 218 IASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
+ G + G+++ A ++ + ++ V Y++L+ G+ K+ + A + M + G
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 278 VRVNVDEYDKLIQSLCL 294
++ ++ Y+ +++ LC+
Sbjct: 635 LQPDIISYNTIMKGLCM 651
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 12/293 (4%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ F + GK K +LE++ E + N +Y + I+ L D A + + M
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYK----AAIELGKYPPMPYINFLVAKLSQEN 120
+ + G + LC + +A V + + L Y I+ L K E
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
A ++KE+ EL A++ L R +G A + EM +G P +
Sbjct: 448 -----ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I G CKAG+ +A +K + G +PD+ TY+++ G +++ A ++ + +
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 241 KHSVLTPVIYHS-LIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ T V+ H+ LI G C + + D+A+ ++ M+ N+ Y+ L++
Sbjct: 563 S-GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 2/289 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ SK G+ L+++E+ + + E + +TY I L D A V ++ +
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDE 318
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
++ + + +L C+ K+KE+ +++ + Y N L+ L EN +
Sbjct: 319 RKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSY-NILIKGL-LENGKID 376
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A + + +P K + + LC V A +M E+ + G + +I
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
CK +E+A ++K + G+ + + + G + A L E K
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
T V Y+ LI G CK +F EA + EM E G + ++ Y L+ LC
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 122/295 (41%), Gaps = 36/295 (12%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
+P+ F+Y I L + D AL + +M + P+ L+ K K K A
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240
Query: 93 VYKAAIELGK-YPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
++ +E YP + N +++ LS+ V L++ + + + RE + +++
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGR-VDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE------- 204
LC +V A+ + E+ +N ++ G+C+ G++++++E+ +++E
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNI 359
Query: 205 ---------------------------SRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
++G D TY + G G + A +++E
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ L Y S+I CK ++ +EA L+ EM + GV +N + LI L
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 147/357 (41%), Gaps = 40/357 (11%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ +F + + +F FE PN TY + I+ ++ F+ A M
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVY----------------------------KA 96
P+ +S ++ L K KL +A ++ K
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 97 AIEL--------GKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAV 148
A+EL YP + N +++ LS+ V L++ + + + RE + ++
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGR-VDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 149 VRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL 208
+ LC +V A+ + E+ +N ++ G+C+ G++++++E+ +++E +
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN- 355
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVK 268
++ +Y ++ G G+++ A I K Y I G C ++A+
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 269 LLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKG-ATRALI 324
++ E++ G ++V Y +I LC K E A L E+ ++G+ L ALI
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLC-KKKRLEEASNLVKEMSKHGVELNSHVCNALI 471
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 1/223 (0%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
E NS I L R S A ++M P S L+ LCK K EA A
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
K +E G P + + L+ L ++ + + LALE+ + E ++ L
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRK-IDLALELWHQFLQSGLETDVMMHNILIHGL 579
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
C V + A +M M +N ++ G+ K G+ +A + + GL+PD+
Sbjct: 580 CSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDI 639
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
+Y I G + A + ++A+ T ++ L+R
Sbjct: 640 ISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 113 VAKLSQENETVPLALEVLK---EIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMI 169
V K +N AL+V K EI G E A + + ++ A K + L
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFG--CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFE 141
Query: 170 ADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEME 229
G P +N +I CK E E+A + + G +PDV++Y+ + + + G+++
Sbjct: 142 TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD 201
Query: 230 AARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE-MKEFGVRVNVDEYDKL 288
A ++ +E ++ Y+ LI G+ K + A++L +++ V NV ++ +
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM 261
Query: 289 IQSL--------CLKAMDWETAEKLHAELKENGLY 315
I L CLK W E++ +E LY
Sbjct: 262 ISGLSKCGRVDDCLKI--W---ERMKQNEREKDLY 291
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 11/276 (3%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N+++ K G+ + +L++ + + EP+ FT L R F AL + +KM
Sbjct: 478 NNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRF 537
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQ-----E 119
P W LV KKL E A L ++ +VA + +
Sbjct: 538 YGFEP-WIKHTTFLV-----KKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIK 591
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
NE V LE+ ++I + + +++ALC+ A L EM++ G P A
Sbjct: 592 NEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVAT 651
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N +I G+CK GE+++ + + + PDV TY + G G A E K
Sbjct: 652 YNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMK 711
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKE 275
K + + +LI+G CK EA+ EM+E
Sbjct: 712 GKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEE 747
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 7/263 (2%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P Y IE + + + +L + +M DA P +++ + L + A +
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL 531
Query: 94 YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALC 153
K G P + + FLV KL + V A + L ++ G+ A + L
Sbjct: 532 LKKMRFYGFEPWIKHTTFLVKKLCENGRAVD-ACKYLDDVAGEGFLGHMVASTAAIDGLI 590
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVY 213
+ + V +L ++ A+G P ++ +I CKA +A + + S+GL+P V
Sbjct: 591 KNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVA 650
Query: 214 TYAVIASGYSNGGEMEAARKI---LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLL 270
TY + G+ GE++ + E +K V+T Y SLI G C + EA+
Sbjct: 651 TYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVIT---YTSLIHGLCASGRPSEAIFRW 707
Query: 271 TEMKEFGVRVNVDEYDKLIQSLC 293
EMK N + LIQ LC
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLC 730
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYI-NFLVAKLSQEN 120
+L++R + G + L + EA +V+ E+G P Y N L+ +S+ N
Sbjct: 132 VLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSN 191
Query: 121 ET-VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ V L LKE+ K V++ C A + E+++ G + +
Sbjct: 192 SSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEH-I 250
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
++ +CK G++++A E++++LE R +R + TY V+ G+ ++ A ++ E+ +
Sbjct: 251 STILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMR 310
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
+ +Y LI G CK + + A+ L E+K G+
Sbjct: 311 RMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGI 349
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 1/260 (0%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
P+S + + I L + + D A+ + ++ IP +++ +CK + +E+ +
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 94 YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALC 153
+ G P +N + L++ + V AL++LK++ E K +V+ LC
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVG-ALDLLKKMRFYGFEPWIKHTTFLVKKLC 555
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVY 213
A + + ++ +G I G K +++ +E+ + + + G PDV
Sbjct: 556 ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 214 TYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
Y V+ A + E K T Y+S+I G+CK + D + + M
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 274 KEFGVRVNVDEYDKLIQSLC 293
E +V Y LI LC
Sbjct: 676 YEDEKNPDVITYTSLIHGLC 695
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 112/257 (43%), Gaps = 7/257 (2%)
Query: 20 ALEVFEKF-EVFQCEPNSFTYYLTIEALYRR--SAFDWALPVCQKMLDARSIPEWYSVGD 76
A VF++ E+ C PN++TY +EA+ + S+ + ++M D + +++
Sbjct: 160 ASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTP 219
Query: 77 LLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGD 136
+L C K + A +V+ + G + LV + + V A E+++ +
Sbjct: 220 VLQVYCNTGKSERALSVFNEILSRG-WLDEHISTILVVSFCKWGQ-VDKAFELIEMLEER 277
Query: 137 RRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQA 196
L K + ++ + + A QL +M G A+++ +I G CK ++E A
Sbjct: 278 DIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMA 337
Query: 197 VEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRG 256
+ + ++ G+ PD + +S E+ +++ K SV+ ++Y SL G
Sbjct: 338 LSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVM--LLYKSLFEG 395
Query: 257 YCKMEQFDEAVKLLTEM 273
+ + + EA + +
Sbjct: 396 FIRNDLVHEAYSFIQNL 412
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 131/303 (43%), Gaps = 9/303 (2%)
Query: 15 GKGKAALEVFEKFEVFQCE----PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPE 70
G AL+ F + E +SF + I A W+L +M R P
Sbjct: 68 NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSL--IHRMRSLRIGPS 125
Query: 71 WYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL 130
+ + K +A ++ E G + + N ++ L + ++ V A E+
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCK-SKRVEKAYELF 184
Query: 131 KEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA 190
+ + G R + + ++ C +K A +++ EM+ G P +N ++ G+ +A
Sbjct: 185 RALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA 243
Query: 191 GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIY 250
G++ A E ++ R DV TY + G+ GE++ AR + +E ++ + + Y
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 251 HSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELK 310
+++I+ CK + + AV + EM G NV Y+ LI+ L A ++ E+L ++
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL-FHAGEFSRGEELMQRME 362
Query: 311 ENG 313
G
Sbjct: 363 NEG 365
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 2/285 (0%)
Query: 11 FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPE 70
++ GK A+++F C + ++ ++ L + + A + + L R +
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVD 194
Query: 71 WYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL 130
+ +L C K+ +A V K +E G P + N ++ + + + A E
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ-IRHAWEFF 253
Query: 131 KEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA 190
E+ E+ + VV ++ A+ + EMI +G P A +N +I CK
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 191 GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIY 250
+E AV M + + RG P+V TY V+ G + GE ++++ + + Y
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 373
Query: 251 HSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
+ +IR Y + + ++A+ L +M N+D Y+ LI + ++
Sbjct: 374 NMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVR 418
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 116/245 (47%), Gaps = 2/245 (0%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ +LV + + G+ A +VF++ ++ EPN +TY + I+AL R A V M
Sbjct: 257 VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM 316
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
LD+ P + +L+ K + ++ VY +LG P NFL+ ++ E
Sbjct: 317 LDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRD-EN 375
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A++VL + + E+ F + R + + +DV A ++ +M+ P +N
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ + + + ++M K ++ + + P+V TY ++ + + G A K+ +E ++
Sbjct: 436 LMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEE- 494
Query: 243 SVLTP 247
LTP
Sbjct: 495 KCLTP 499
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 109/284 (38%), Gaps = 37/284 (13%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + + G A+ F + E + C P+ + + I L R+ A + D R
Sbjct: 192 LIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD-R 250
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ +L+ C+ ++ EA V+K ++L P Y
Sbjct: 251 FEPDVIVYTNLVRGWCRAGEISEAEKVFKE-MKLAGIEPNVYT----------------- 292
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+ V+ ALCR + A + +M+ G P FN ++
Sbjct: 293 ------------------YSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRV 334
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
+ KAG E+ +++ ++ G PD TY + + +E A K+L KK +
Sbjct: 335 HVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVN 394
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
++++ R K + A ++ ++M E N Y+ L++
Sbjct: 395 ASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR 438
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F V+ L R + A Q + + D P V+ ++ G+C+AGE+ +A ++ K ++
Sbjct: 224 FSIVISNLSRKRRASEA-QSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G+ P+VYTY+++ G++ A + + + +++L+R + K + +
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE 342
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ +++ +MK+ G + Y+ LI++ C
Sbjct: 343 KVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 136 DRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQ 195
DR E + +VR CR ++ A+++ EM G P ++ VI C+ G++ +
Sbjct: 249 DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISR 308
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
A ++ + G P+ T+ + + G E ++ + KK + Y+ LI
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
+C+ E + AVK+L M + VN ++ + + + K D A ++++++ E
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI-EKKRDVNGAHRMYSKMME 423
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 19/297 (6%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ + K + A EVFE + P+S TY + +E + A V ++M+
Sbjct: 206 FNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYI-NFLVAKLSQEN-- 120
DA P+ + ++ LCK ++ EA + ++ ++ P +I + LV EN
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS-MDPSICKPTTFIYSVLVHTYGTENRL 323
Query: 121 -ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
E V LE+ E G + ++A F +++ A C+ + +++ EM + G P +
Sbjct: 324 EEAVDTFLEM--ERSGMKADVAV--FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 379
Query: 180 FNFVITGYCKAGEMEQAVE----MMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKIL 235
N ++ + GE ++A + M+K+ E PD TY ++ + EME A K+
Sbjct: 380 CNIILRHLIERGEKDEAFDVFRKMIKVCE-----PDADTYTMVIKMFCEKKEMETADKVW 434
Query: 236 EEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ +KK + + LI G C+ +A LL EM E G+R + + +L Q L
Sbjct: 435 KYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL 491
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F ++ ALC+ K+V A+++ E + D P + ++ ++ G+ K + +A E+ + +
Sbjct: 206 FNGLLSALCKSKNVRKAQEV-FENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G PD+ TY+++ G ++ A I+ T IY L+ Y + +
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 324
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
EAV EM+ G++ +V ++ LI + C KA + ++ E+K G+
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFC-KANRMKNVYRVLKEMKSKGV 373
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 10/330 (3%)
Query: 11 FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPE 70
+++ K A+ F E + PN + + AL + A V + M D R P+
Sbjct: 178 YARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPD 236
Query: 71 WYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL 130
+ LL K L +A V++ I+ G +P + + +V L + V AL ++
Sbjct: 237 SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGR-VDEALGIV 295
Query: 131 KEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA 190
+ + + + +V + A LEM G AVFN +I +CKA
Sbjct: 296 RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKA 355
Query: 191 GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPV-- 248
M+ ++K ++S+G+ P+ + +I GE + A + +K V P
Sbjct: 356 NRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVF---RKMIKVCEPDAD 412
Query: 249 IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAE 308
Y +I+ +C+ ++ + A K+ M++ GV ++ + LI LC + + A L E
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLC-EERTTQKACVLLEE 471
Query: 309 LKENGLYLKGATRALIRA--VKEMENEVVE 336
+ E G+ G T +R +KE +V++
Sbjct: 472 MIEMGIRPSGVTFGRLRQLLIKEEREDVLK 501
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 165/393 (41%), Gaps = 70/393 (17%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEK-FEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ + ++ F K+GK + AL FE + PN TY + AL + D + +
Sbjct: 172 FVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVR 231
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
++ D + + + KG L +A + +E G + + L+ LS+E
Sbjct: 232 RLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEG 291
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
V AL +L ++ + E + A++R LC++ + A L +++ G ++
Sbjct: 292 -NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRP------------------------------ 210
+I G C+ G + +A M+ +E RG++P
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG 410
Query: 211 DVYTYAVIASGYSNGGEMEAA----RKILE------------------------EAKKKH 242
DV TY+ + Y ++A R+ LE EA +
Sbjct: 411 DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY 470
Query: 243 SV-----LTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
LTP Y ++I+GYCK Q +EA+++ E+++ V V Y+++I +LC K
Sbjct: 471 RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKK 529
Query: 296 AMDWETAEKLHAELKENGLYLKGAT-RALIRAV 327
M +TA ++ EL E GLYL T R L+ ++
Sbjct: 530 GM-LDTATEVLIELWEKGLYLDIHTSRTLLHSI 561
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 12/276 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTI-----EALYRRSAFDWALP 57
+LND + K G +AA+EV + + + + + T+ TI + L A+ +
Sbjct: 588 MLNDAILLLCKRGSFEAAIEV---YMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVN 644
Query: 58 VCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS 117
+ L + + ++ + + LCK L +A + A G N L+ L
Sbjct: 645 AGETTLSSMDVIDYTII---INGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLC 701
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
Q+ V AL + + ++ + ++ LC+ A++L+ M++ G P
Sbjct: 702 QQGCLVE-ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 760
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
++N ++ GYCK G+ E A+ ++ + PD +T + + GY G+ME A + E
Sbjct: 761 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
K K+ + LI+G+C + +EA LL EM
Sbjct: 821 FKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 7/243 (2%)
Query: 74 VGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEI 133
+ D ++ LCK + A VY G P + ++ L ++ L V+
Sbjct: 589 LNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFP--STILKTLVDNLRSLDAYLLVVNAG 646
Query: 134 PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEM 193
+ + ++ LC+ + A L + G +N +I G C+ G +
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 194 EQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
+A+ + LE+ GL P TY ++ G A K+L+ K V +IY+S+
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEY--DKLIQSLCLKAMDWETAEKLHAELKE 311
+ GYCK+ Q ++A+++++ K G RV D + +I+ C K D E A + E K+
Sbjct: 767 VDGYCKLGQTEDAMRVVSR-KMMG-RVTPDAFTVSSMIKGYCKKG-DMEEALSVFTEFKD 823
Query: 312 NGL 314
+
Sbjct: 824 KNI 826
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ +++ LC+ + A +L + G P + +I CK G A +++ +
Sbjct: 693 YNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMV 752
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIY--HSLIRGYCKMEQ 262
S+GL P++ Y I GY G+ E A +++ ++K +TP + S+I+GYCK
Sbjct: 753 SKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV--SRKMMGRVTPDAFTVSSMIKGYCKKGD 810
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGATRA 322
+EA+ + TE K+ + + + LI+ C K E A L E+ + +
Sbjct: 811 MEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGR-MEEARGLLREML--------VSES 861
Query: 323 LIRAVKEMENEVVES 337
+++ + ++ E+ ES
Sbjct: 862 VVKLINRVDAELAES 876
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 132/307 (42%), Gaps = 6/307 (1%)
Query: 2 YILNDLV--FSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVC 59
++L+ L+ FS ++ K L + + P+S T+ I + D A+ V
Sbjct: 98 HMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVL 157
Query: 60 QKMLDAR-SIP-EWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKY-PPMPYINFLVAKL 116
+ M + + P + + ++ CK K + A +++A++ G P + LV+ L
Sbjct: 158 EMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSAL 217
Query: 117 SQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
Q + V ++++ + + E + + + + A EM+ G
Sbjct: 218 CQLGK-VDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRD 276
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
++ +I G K G +E+A+ ++ + G+ P++ TY I G G++E A +
Sbjct: 277 VVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFN 336
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+ +Y +LI G C+ + A +L +M++ G++ ++ Y+ +I LC+
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 297 MDWETAE 303
E E
Sbjct: 397 RVSEADE 403
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 127/308 (41%), Gaps = 49/308 (15%)
Query: 7 LVFSFSKLGKGKAALEVFEK---------FEVFQCEPNSFTYYLTIEALYRRSAFDWALP 57
L++ F + G+ A+EV E F+ F C I + + AL
Sbjct: 140 LIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSA-------VISGFCKIGKPELALG 192
Query: 58 VCQKMLDARS-IPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELG-KYPPMPYINF---- 111
+ +D+ +P + L+ LC+ K+ E + + + G ++ + Y N+
Sbjct: 193 FFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGY 252
Query: 112 -----LVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLML 166
LV L Q+ E V G R++ + ++ L + +V A L+
Sbjct: 253 FKGGALVDALMQDREMVE---------KGMNRDVVS--YSILIDGLSKEGNVEEALGLLG 301
Query: 167 EMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGG 226
+MI +G P + +I G CK G++E+A + + S G+ D + Y + G G
Sbjct: 302 KMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 361
Query: 227 EMEAARKILEEAKKKHSVLTPVIYHSLIRGYC---KMEQFDEAVKLLTEMKEFGVRVNVD 283
+ A +L + +++ + + Y+++I G C ++ + DE K GV +V
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK--------GVVGDVI 413
Query: 284 EYDKLIQS 291
Y L+ S
Sbjct: 414 TYSTLLDS 421
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 12/248 (4%)
Query: 39 YYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAI 98
Y + I L + AL +C + L+ LC+ L EA ++ +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 99 ELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDV 158
+G P L+ L +E + A ++L + + ++V C++
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLD-AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQT 776
Query: 159 GTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVI 218
A +++ + P + +I GYCK G+ME+A+ + + + + D + + +
Sbjct: 777 EDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFL 836
Query: 219 ASGYSNGGEMEAARKILEEAKKKHSVL-------TPVIYHSLIRGY----CKMEQFDEAV 267
G+ G ME AR +L E SV+ + IRG+ C+ + +A+
Sbjct: 837 IKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAI 896
Query: 268 KLLTEMKE 275
K+L E+
Sbjct: 897 KILDEISS 904
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 46 LYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLC-------KGKKLKEAHAVYKAAI 98
LYR F+ L + LD++ I + + ++ W +K H + KA+I
Sbjct: 36 LYRLQKFNCILQFYSQ-LDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIH-ISKASI 93
Query: 99 ELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRREL-AKKRFPAVVRALCRVKD 157
+P ++ L+ S + L +L++ + + F +++ +
Sbjct: 94 ----FPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGE 149
Query: 158 VGTAKQLMLEMIAD---GPPPGNAVFNFVITGYCKAGEMEQAVEMMK-LLESRGLRPDVY 213
+ A ++ LEM+ + P N V + VI+G+CK G+ E A+ + ++S L P++
Sbjct: 150 MDNAIEV-LEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLV 208
Query: 214 TYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
TY + S G+++ R ++ + + V Y + I GY K +A+ EM
Sbjct: 209 TYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREM 268
Query: 274 KEFGVRVNVDEYDKLIQSL 292
E G+ +V Y LI L
Sbjct: 269 VEKGMNRDVVSYSILIDGL 287
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 7/279 (2%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I DL+ + + A+ +F+ P + Y + I+ L R + A +C
Sbjct: 185 IFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDW 244
Query: 63 LDARSIPEWY---SVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
++ R+ S+G ++ LC +K++EA + + + LG + + +++
Sbjct: 245 VETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEK 304
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ L L + E+ + R ++ +LCR A M E+ G
Sbjct: 305 QDFEDL-LSFIGEVKYEPDVFVGNR---ILHSLCRRFGSERAYVYMEELEHLGFKQDEVT 360
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
F +I C G++++AV + + S+G +PDVY+Y I SG G + IL+E K
Sbjct: 361 FGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMK 420
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
+ +L+ + ++ GYCK QF+EA +++ +M +G+
Sbjct: 421 ENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGL 459
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 4/218 (1%)
Query: 77 LLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGD 136
L+ ++ + K E + V G P NFLV S +L L +
Sbjct: 915 LIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSS-ADYSSSLRYLSAMISK 973
Query: 137 RRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF-VITGYCKAGEMEQ 195
+ + AV +LC DV A L M + G G++V ++ GE+ +
Sbjct: 974 GMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPK 1033
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
A + + + G+ Y I S+ G ++ A +L K S+ Y S+I
Sbjct: 1034 AEDFLTRVTRNGMMAP--NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVIN 1091
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
G + Q D+A+ TEM E G+ ++ + L+ C
Sbjct: 1092 GLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFC 1129
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 128/291 (43%), Gaps = 5/291 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ + ++ G ++ V + +P +Y L ++ + + + ++ +
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 589
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+ P W + LL+ K + L + + + G P M N +++ ++ N
Sbjct: 590 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNN-MYD 648
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A +L+ I D + +++ R + A++++ + P +N VI
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G+C+ G M++AV M+ + RG+RP ++TY SGY+ G ++E K
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
+ + ++ GYC+ ++ EA+ ++++K F + D+ IQ L L+
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFD----DQSIQRLALR 815
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 7/265 (2%)
Query: 56 LPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAK 115
+P+ + +LD R+ Y+ +L + K ++A +++ E+G P + N ++
Sbjct: 201 IPLQEYLLDVRA----YTT--ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDV 254
Query: 116 LSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPP 175
+ + L VL E+ + + V+ A R + AK+ E+ + G P
Sbjct: 255 FGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEP 314
Query: 176 GNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKIL 235
G +N ++ + KAG +A+ ++K +E D TY + + Y G + A ++
Sbjct: 315 GTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVI 374
Query: 236 EEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
E KK + + Y ++I Y K + DEA+KL MKE G N Y+ ++ L K
Sbjct: 375 EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK 434
Query: 296 AMDWETAEKLHAELKENGLYLKGAT 320
+ E K+ ++K NG AT
Sbjct: 435 SRSNEMI-KMLCDMKSNGCSPNRAT 458
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P +FN +++ + + +QA +++ + GL PD+ TY + Y GE A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+IL+ +K V Y+++I+G+C+ EAV++L+EM E G+R + Y+ +
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 292 LCLKAMDWETAEKLHA----ELKENGLYLKGATRALIRAVKEME 331
M E + + + + N L K RA K E
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 161 AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIAS 220
A ++ EM + P + +N ++ Y +AG ++A +++++ +G+ P+ TY +
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 221 GYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRV 280
Y G+ + A K+ K+ V Y++++ K + +E +K+L +MK G
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 281 NVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
N ++ ++ K MD + ++ E+K G
Sbjct: 455 NRATWNTMLALCGNKGMD-KFVNRVFREMKSCGF 487
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 123/310 (39%), Gaps = 2/310 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N+LV ++ + G K A V E PN+ TY I+A + D AL + M +
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
A +P + +L L K + E + G P N ++A L
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDK 473
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
V +E+ E + F ++ A R A ++ EM G +N ++
Sbjct: 474 FVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALL 533
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
+ G+ ++ ++S+G +P +Y+++ Y+ GG +I K+
Sbjct: 534 NALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIF 593
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
+ ++ +L+ K + + T K+ G + ++ ++ ++ M ++ AE
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM-YDQAEG 652
Query: 305 LHAELKENGL 314
+ ++E+GL
Sbjct: 653 ILESIREDGL 662
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 99/259 (38%), Gaps = 9/259 (3%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F K G AL V ++ E C +S TY + A R A V + M
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYIN---FLVAKLSQENE 121
+P + ++ K K EA ++ + E G P N L+ K S+ NE
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGT-AKQLMLEMIADGPPPGNAVF 180
+ + ++ R + ALC K + ++ EM + G P F
Sbjct: 440 MIKMLCDMKSNGCSPNRATWN-----TMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTF 494
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I+ Y + G A +M + G V TY + + + G+ + ++ + K
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 241 KHSVLTPVIYHSLIRGYCK 259
K T Y +++ Y K
Sbjct: 555 KGFKPTETSYSLMLQCYAK 573
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 126/305 (41%), Gaps = 16/305 (5%)
Query: 18 KAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDL 77
+ A E F + + EP + TY ++ + + AL V ++M + + + +L
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 78 LVWLCKGKKLKEAHAVYKAAIELGKYP-PMPYINFLVA--KLSQENETVPLALEVLKE-- 132
+ + KEA V + + G P + Y + A K +E+E + L +KE
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL-FYSMKEAG 416
Query: 133 -IPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAG 191
+P + AV+ L + +++ +M ++G P A +N ++ C
Sbjct: 417 CVPN------TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNK 469
Query: 192 EMEQAVE-MMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIY 250
M++ V + + ++S G PD T+ + S Y G A K+ E + Y
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 251 HSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELK 310
++L+ + + ++++MK G + Y ++Q K ++ E++ +K
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA-KGGNYLGIERIENRIK 588
Query: 311 ENGLY 315
E ++
Sbjct: 589 EGQIF 593
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 141/342 (41%), Gaps = 33/342 (9%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ LN L+ SF K+G+ A+ + + ++ TY I L D A
Sbjct: 129 VFALNVLIHSFCKVGRLSFAISLLRNRVI---SIDTVTYNTVISGLCEHGLADEAYQFLS 185
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEA-------------------------HAV-- 93
+M+ +P+ S L+ CK A HA+
Sbjct: 186 EMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEE 245
Query: 94 -YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
Y+ + G P + + ++ +L + + + L +L+E+ + +V +L
Sbjct: 246 AYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL-LLREMEEMSVYPNHVTYTTLVDSL 304
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
+ A L +M+ G P V+ ++ G KAG++ +A + K+L P+V
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 364
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
TY + G G++ +A I+ + +K + V Y S+I GY K +EAV LL +
Sbjct: 365 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 424
Query: 273 MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
M++ V N Y +I L KA E A +L E++ G+
Sbjct: 425 MEDQNVVPNGFTYGTVIDGL-FKAGKEEMAIELSKEMRLIGV 465
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 16/292 (5%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ F K+G A + ++ E N T+ + + + Y A + A + M+
Sbjct: 200 NTLIDGFCKVGNFVRAKALVDEIS----ELNLITHTILLSSYYNLHAIEEAY---RDMVM 252
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN-ETV 123
+ P+ + ++ LCKG K+ E + + E+ YP LV L + N
Sbjct: 253 SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRH 312
Query: 124 PLAL---EVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
LAL V++ IP D + ++ L + D+ A++ ++ D P +
Sbjct: 313 ALALYSQMVVRGIPVDL-----VVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTY 367
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
++ G CKAG++ A ++ + + + P+V TY+ + +GY G +E A +L + +
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 427
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
++ V Y ++I G K + + A++L EM+ GV N D L+ L
Sbjct: 428 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHL 479
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 129/299 (43%), Gaps = 19/299 (6%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N ++ S K G + L++++K + +P+ + + + L + A+ + +M+
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYP---PMPYINFLVAKLSQEN 120
P ++ ++L K K A A++K L Y N L+A L +
Sbjct: 636 LMEIHP---NLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 692
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVV--RALCRVKDVGTAKQLMLE----MIADGPP 174
T A+ + GD A+ P V +L VG+ + L M+ G
Sbjct: 693 MTKKAAM-----VMGDME--ARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS 745
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
P A +N +I G AG +++ + + ++SRG+RPD +TY + SG + G M+ + I
Sbjct: 746 PNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Query: 235 LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
E V Y+ LI + + + +A +LL EM + GV N Y +I LC
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 167 EMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGG 226
+MIA G P N +I +CK G + A+ LL +R + D TY + SG G
Sbjct: 119 KMIACGVSPDVFALNVLIHSFCKVGRLSFAIS---LLRNRVISIDTVTYNTVISGLCEHG 175
Query: 227 EMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
+ A + L E K + V Y++LI G+CK+ F A L+ E+ E +
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL 227
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 32/299 (10%)
Query: 11 FSKLGKGKAALE---VFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARS 67
++L KG LE + + E PN TY +++L++ + + AL + +M+ R
Sbjct: 266 INRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV-VRG 324
Query: 68 IPEWYSVGDLLVW------LCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
IP DL+V+ L K L+EA +K +E + P + LV L + +
Sbjct: 325 IPV-----DLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLE--------MIADGP 173
+ + L K P VV + G K+ MLE M
Sbjct: 380 LSSAEFII-------TQMLEKSVIPNVVTYSSMIN--GYVKKGMLEEAVSLLRKMEDQNV 430
Query: 174 PPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARK 233
P + VI G KAG+ E A+E+ K + G+ + Y + + G ++ +
Sbjct: 431 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490
Query: 234 ILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
++++ K L + Y SLI + K + A+ EM+E G+ +V Y+ LI +
Sbjct: 491 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGM 549
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 125/301 (41%), Gaps = 8/301 (2%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
+ ++ + K G + A+ + K E PN FTY I+ L++ + A+ + ++M
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELG-KYPPMPYINFLVAKLSQENETV 123
Y + L+ L + ++KE + K + G + Y + + +E
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEA 522
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
LA + G ++ + ++ + + VG A M G P A FN +
Sbjct: 523 ALAWAEEMQERGMPWDVVS--YNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIM 579
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA--KKK 241
+ K G+ E +++ ++S G++P + + ++ G+ME A IL + +
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
H LT Y + K ++ D K + +G++++ Y+ LI +LC M +
Sbjct: 640 HPNLTT--YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKA 697
Query: 302 A 302
A
Sbjct: 698 A 698
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 141/343 (41%), Gaps = 16/343 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ + L +F+ L K + A + F + + + P + + +L + D AL ++M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+ P Y++ ++ C+ KL + + + LG N L+A E
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC-EKGL 288
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ AL++ + + F ++ CR + A ++ EM A P +N
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I GY + G+ E A + + G++ D+ TY + G + A + ++E K++
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
V + +LI G C + D +L M G N ++ L+ + C + D++ A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC-RNEDFDGA 467
Query: 303 EKLHAELKE--------------NGLYLKGATRALIRAVKEME 331
++ E+ NGL +G + + + ++EME
Sbjct: 468 SQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 7/275 (2%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
Y LN ++ + + GK +E+ + E +Y I + AL +
Sbjct: 239 YTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNM 298
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M + P + L+ C+ KL+EA V+ + P N L+ SQ+ +
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 122 TVPLALEVLKEI--PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+A +++ G +R++ + A++ LC+ A Q + E+ + P ++
Sbjct: 359 H-EMAFRFYEDMVCNGIQRDILT--YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
F+ +I G C ++ E+ K + G P+ T+ ++ S + + + A ++L E
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAV-KLLTEM 273
++ L H + G K + D+ V KLL EM
Sbjct: 476 RRSIPLDSRTVHQVCNGL-KHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 141/343 (41%), Gaps = 16/343 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ + L +F+ L K + A + F + + + P + + +L + D AL ++M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+ P Y++ ++ C+ KL + + + LG N L+A E
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC-EKGL 288
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ AL++ + + F ++ CR + A ++ EM A P +N
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I GY + G+ E A + + G++ D+ TY + G + A + ++E K++
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
V + +LI G C + D +L M G N ++ L+ + C + D++ A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC-RNEDFDGA 467
Query: 303 EKLHAELKE--------------NGLYLKGATRALIRAVKEME 331
++ E+ NGL +G + + + ++EME
Sbjct: 468 SQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 7/275 (2%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
Y LN ++ + + GK +E+ + E +Y I + AL +
Sbjct: 239 YTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNM 298
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M + P + L+ C+ KL+EA V+ + P N L+ SQ+ +
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 122 TVPLALEVLKEI--PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+A +++ G +R++ + A++ LC+ A Q + E+ + P ++
Sbjct: 359 H-EMAFRFYEDMVCNGIQRDILT--YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
F+ +I G C ++ E+ K + G P+ T+ ++ S + + + A ++L E
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAV-KLLTEM 273
++ L H + G K + D+ V KLL EM
Sbjct: 476 RRSIPLDSRTVHQVCNGL-KHQGKDQLVKKLLQEM 509
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 144/344 (41%), Gaps = 44/344 (12%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N ++ +FS+ G + A++ K + P + TY I+ + + + ML
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 64 DARSI---PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+ ++ P + L+ CK KK++EA V K E G P N + Q+
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 121 ETVPLALEVLKEI-------PGDR----------------------RELAKKR------- 144
ETV EV++++ P R R + + R
Sbjct: 238 ETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F +++ V D +++ M ++ V+ + AG ME+A ++ K +
Sbjct: 298 FNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 357
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEE--AKKKHSVLTPVIYHSLIRGYCKMEQ 262
G++PD + Y+++A GY E + A ++LE + + +V VI+ ++I G+C
Sbjct: 358 KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNV---VIFTTVISGWCSNGS 414
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
D+A+++ +M +FGV N+ ++ L+ W+ E L
Sbjct: 415 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQ 458
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 131/322 (40%), Gaps = 57/322 (17%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
EP T T YR C+ ++ S S L+ L + + EA
Sbjct: 16 EPERSTPIKTTGGQYR---------FCKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQT 66
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
V+K E G P + L+A ++ + + ++ ++ E+ +L F AV+ A
Sbjct: 67 VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSIS-SIVSEVEQSGTKLDSIFFNAVINAF 125
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGY------------------------- 187
++ A Q +L+M G P + +N +I GY
Sbjct: 126 SESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVG 185
Query: 188 -------------CKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEM-----E 229
CK ++E+A E++K +E G+RPD TY IA+ Y GE E
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 230 AARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLI 289
K++ + K K + T I ++ GYC+ + + ++ + MKE V N+ ++ LI
Sbjct: 246 VVEKMVMKEKAKPNGRTCGI---VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 290 QSLCLKAMDWETAEKLHAELKE 311
++ MD + +++ +KE
Sbjct: 303 NGF-VEVMDRDGIDEVLTLMKE 323
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEM--IADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
F + + A CR + + A M + DG P V+N V+ GY K+G+M++A+ +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKP-NVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+ +PDV T+ ++ +GY + + A + E K+K V +++LIRG+ +
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+E VK+ EM E G R + + L+ LC
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 9/294 (3%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ N +V + K G AL +++ + +P+ T+ + I R S FD AL + ++M
Sbjct: 195 VYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREM 254
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE--- 119
+ P S L+ K++E + IELG LV L +E
Sbjct: 255 KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRV 314
Query: 120 NETVPLALEVLKEIPGDRRELAKK-RFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
++ L L++L ++R L + + ++V LC A ++M E+ G P
Sbjct: 315 DDACGLVLDLL-----NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
++ G K+G E+A M+ + + G+ PD T+ ++ + A ++ A
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLA 429
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
K YH L+ G+ K + E L+ EM + + ++ Y++L+ L
Sbjct: 430 SSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 108/271 (39%), Gaps = 8/271 (2%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFE-VFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
I + ++ + K AL F+ + + +PN Y + + D AL Q+
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN- 120
M R+ P+ + L+ C+ K A +++ E G P + N L+
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 121 --ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
E V +A E+++ G R ++ +V LCR V A L+L+++ P
Sbjct: 279 IEEGVKMAYEMIEL--GCR--FSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEF 334
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+ ++ C + +A+EMM+ L +G P + G G E A +E+
Sbjct: 335 DYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
+ V ++ L+R C + +A +L
Sbjct: 395 MNAGILPDSVTFNLLLRDLCSSDHSTDANRL 425
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 1/226 (0%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ F GK + +++ + C + T + ++ L R D A + +L
Sbjct: 266 FNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+ R +P + G L+ LC K A + + + G+ P LV L + T
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE 385
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
A ++++ F ++R LC A +L L + G P ++ +
Sbjct: 386 K-ASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL 444
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEME 229
++G+ K G ++ ++ + + + PD++TY + G S G+
Sbjct: 445 VSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 151/327 (46%), Gaps = 27/327 (8%)
Query: 3 ILNDLVFSFSKLGK--GKAALEVFEKFEVFQCEPNSFTYYLTIEALYR-----RSAFDWA 55
++++ V SKL K G E+ K E +P++ L +E L R +AF +
Sbjct: 92 LVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSN---ELVVEILSRVRNDWETAFTFF 148
Query: 56 LPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYIN----- 110
+ ++ RS+ E++S+ +L K+++ + E+ K+ P +N
Sbjct: 149 VWAGKQQGYVRSVREYHSMISIL------GKMRKFDTAWTLIDEMRKFSP-SLVNSQTLL 201
Query: 111 FLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIA 170
++ K ++ V A+ + E+ F +++ ALCR K+V A L+
Sbjct: 202 IMIRKYCAVHD-VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIF-CNK 259
Query: 171 DGPPPGNAVFNFVITGYCKA-GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEME 229
D P FN V+ G+C G +A + + + G++ DV +Y+ + S YS GG +
Sbjct: 260 DKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLN 319
Query: 230 AARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM-KEFGVRVNVDEYDKL 288
K+ + KK+ +Y++++ K EA L+ M +E G+ NV Y+ L
Sbjct: 320 KVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSL 379
Query: 289 IQSLCLKAMDWETAEKLHAELKENGLY 315
I+ LC KA E A+++ E+ E GL+
Sbjct: 380 IKPLC-KARKTEEAKQVFDEMLEKGLF 405
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 139 ELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD-GPPPGNAVFNFVITGYCKAGEMEQAV 197
E +K + AVV AL + V A+ LM M + G P +N +I CKA + E+A
Sbjct: 334 EPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAK 393
Query: 198 EMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGY 257
++ + +GL P + TY G E ++L + +K T Y LIR
Sbjct: 394 QVFDEMLEKGLFPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCEPTVETYIMLIRKL 450
Query: 258 CKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
C+ FD + L EMKE V ++ Y +I L L E A + E+K+ G+
Sbjct: 451 CRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNG-KIEEAYGYYKEMKDKGM 506
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 7/233 (3%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
+ ++ +SK G L++F++ + EP+ Y + AL + S A + + M +
Sbjct: 306 SSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEE 365
Query: 65 ARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+ I P + L+ LCK +K +EA V+ +E G +P + + + L E
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV- 424
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
E+L ++ E + + ++R LCR +D L EM P + + +
Sbjct: 425 ---FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVM 481
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
I G G++E+A K ++ +G+RP+ +I S +S G+ A ++I +
Sbjct: 482 IHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFS--GKQYAEQRITD 532
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 113/293 (38%), Gaps = 40/293 (13%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N +V KLG+ K A ++ F CEP+ +Y I+ R A V + +
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 64 DARSI---PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+ P+ S L K K L E VY + P + + + +
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
E +LA K F ++ R D P F
Sbjct: 178 EL----------------QLALKSFHSMKR--------------------DALSPNVVTF 201
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
+I GYCKAG++E AV + K + + +V TY + G+ GEM+ A ++ +
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
++Y ++I G+ + D A+K L +M G+R+++ Y +I LC
Sbjct: 262 DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 127/291 (43%), Gaps = 5/291 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEV---FQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
N L+ + G ++A V E F C+P+ ++ + D
Sbjct: 95 NSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGV 154
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
ML S P + + CK +L+ A + + P + L+ + +
Sbjct: 155 MLKCCS-PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGD 213
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
+ +A+ + KE+ R L + A++ C+ ++ A+++ M+ D P + V+
Sbjct: 214 -LEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYT 272
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I G+ + G+ + A++ + + ++G+R D+ Y VI SG G+++ A +I+E+ +K
Sbjct: 273 TIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKS 332
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
V VI+ +++ Y K + AV + ++ E G +V +I +
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGI 383
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 130/313 (41%), Gaps = 13/313 (4%)
Query: 8 VFSFSKLGKGKAALEVFEKFEVFQ------CEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
+ SF+ L G + +++ ++ V+ C PN TY I+ + AL
Sbjct: 129 IVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHS 188
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M P + L+ CK L+ A ++YK + + L+ ++ E
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
+ A E+ + DR E + ++ + D A + + +M+ G +
Sbjct: 249 -MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I+G C G++++A E+++ +E L PD+ + + + Y G M+AA + + ++
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
V ++I G K Q EA+ K V Y LI +LC K D+
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM-----YTVLIDALC-KEGDFIE 421
Query: 302 AEKLHAELKENGL 314
E+L +++ E GL
Sbjct: 422 VERLFSKISEAGL 434
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 122/315 (38%), Gaps = 41/315 (13%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ F K G+ + A E++ + + EPNS Y I+ ++R D A+ KML+
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAV--------------------------------- 93
+ + G ++ LC KLKEA +
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 94 --YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
Y IE G P + ++ ++ +++ + + E D + ++ A
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND------VMYTVLIDA 412
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
LC+ D ++L ++ G P ++ I G CK G + A ++ + GL D
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT 271
+ Y + G ++ G M AR++ +E ++ LIR Y K A LL
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 272 EMKEFGVRVNVDEYD 286
+M+ G+ V + D
Sbjct: 533 DMQRRGLVTAVSDAD 547
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 38/208 (18%)
Query: 142 KKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQA----- 196
+ F +VV +C++ V A+ ++ M G P +N +I G+C+ G++ A
Sbjct: 56 RSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLE 115
Query: 197 -----------------------VEMMKLLES---------RGLRPDVYTYAVIASGYSN 224
MK+L+ + P+V TY+ +
Sbjct: 116 SLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCK 175
Query: 225 GGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDE 284
GE++ A K K+ V + LI GYCK + AV L EM+ + +NV
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 285 YDKLIQSLCLKAMDWETAEKLHAELKEN 312
Y LI C K + + AE++++ + E+
Sbjct: 236 YTALIDGFCKKG-EMQRAEEMYSRMVED 262
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 168 MIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGE 227
+++ G P + FN V++ CK G+++ A +++ + G PDV +Y + G+ G+
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 228 MEAARKILEEAKKKHSVLTP---VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDE 284
+ +A +LE + H + V ++SL G+ KM+ DE + M + NV
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVT 165
Query: 285 YDKLIQSLCLKAMDWETAEKLHAELKENGL 314
Y I + C K+ + + A K +K + L
Sbjct: 166 YSTWIDTFC-KSGELQLALKSFHSMKRDAL 194
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 9/283 (3%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L+ S + G K A+ F K + F P +Y + +L + V ++ML
Sbjct: 187 FNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQML 246
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+ P+ + LL + K+ ++ G P N L+ L + N+
Sbjct: 247 EDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK-- 304
Query: 124 PLA----LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
PLA L +KE+ D L + ++ L R ++ K + EM+ G P
Sbjct: 305 PLAALTTLNHMKEVGIDPSVL---HYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+ +ITGY +GE+++A EM + + +G P+V+TY + G GE A +L+E +
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNV 282
+ V+Y +L+ K + EA K++ EM + G V++
Sbjct: 422 SRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHL 464
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVY 213
R+ + +L EM DG P + +N ++ K + A+ + ++ G+ P V
Sbjct: 266 RLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVL 325
Query: 214 TYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
Y + G S G +EA + L+E K V Y +I GY + D+A ++ EM
Sbjct: 326 HYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM 385
Query: 274 KEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
G NV Y+ +I+ LC+ A ++ A L E++ G
Sbjct: 386 TVKGQLPNVFTYNSMIRGLCM-AGEFREACWLLKEMESRG 424
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P N ++ CK ++E A +++ + S GL P++ TY I GY G+ME+A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+++LEE + Y L+ GYCK+ +F EA ++ +M++ + N Y +I++
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 292 LC 293
LC
Sbjct: 306 LC 307
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
+V+ALC+ D+ +A +++ E+ + G P + ++ GY G+ME A +++ + RG
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
PD TY V+ GY G A ++++ +K V Y +IR CK ++ EA
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ EM E + K+I +LC
Sbjct: 317 NMFDEMLERSFMPDSSLCCKVIDALC 342
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 3/243 (1%)
Query: 73 SVGDLLVWLCKGKKLKEAHAVYKAAIE-LGKYPPMPYINFLVAKLSQENETVPLALEVLK 131
S+ LL L + ++ HA++K + E G P + N LV L ++N+ + A +VL
Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKND-IESAYKVLD 215
Query: 132 EIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAG 191
EIP + ++ D+ +AK+++ EM+ G P + ++ GYCK G
Sbjct: 216 EIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
+A +M +E + P+ TY V+ + AR + +E ++ + +
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC 335
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
+I C+ + DEA L +M + + LI LC + E A KL E ++
Sbjct: 336 KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTE-ARKLFDEFEK 394
Query: 312 NGL 314
+
Sbjct: 395 GSI 397
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 8/295 (2%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ N LV + K ++A +V ++ PN TY + R + A V +
Sbjct: 191 IFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLE 250
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE- 119
+MLD P+ + L+ CK + EA V + P ++ L +E
Sbjct: 251 EMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEK 310
Query: 120 --NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
E + E+L+ L K V+ ALC V A L +M+ + P N
Sbjct: 311 KSGEARNMFDEMLERSFMPDSSLCCK----VIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
A+ + +I CK G + +A ++ E +G P + TY + +G GE+ A ++ ++
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
++ Y+ LI G K E V++L EM E G N + L + L
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 37/265 (13%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + KLG+ A V + E + EPN TY + I AL + A + +ML+
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERS 326
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+P+ ++ LC+ K+ EA +++ ++ P N L++ L
Sbjct: 327 FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD----NALLSTL---------- 372
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+ LC+ V A++L E G P +N +I G
Sbjct: 373 ----------------------IHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAG 409
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
C+ GE+ +A + + R +P+ +TY V+ G S G ++ ++LEE +
Sbjct: 410 MCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPN 469
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLT 271
+ L G K+ + ++A+K+++
Sbjct: 470 KTTFLILFEGLQKLGKEEDAMKIVS 494
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 136/307 (44%), Gaps = 11/307 (3%)
Query: 11 FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPE 70
F K+GK + A+++ F + PN F Y + + A + Q++ + +P+
Sbjct: 351 FCKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 71 WYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL 130
++ C + +A + A ++ G P + L+ S+ ++ A V
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG-SISDAESVF 466
Query: 131 KEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA 190
+ + + +L + ++ + + +L+ EM + G P A +N +I
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 191 GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI---LEEAKKKHSVLTP 247
G +++A E++ L RG P + + G+S G+ + A + + + + K V+T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 248 VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHA 307
+L+ GYCK ++ ++A+ L ++ + G++ +V Y+ LI C D E A +L
Sbjct: 587 ---SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC-SVGDIEKACELIG 642
Query: 308 ELKENGL 314
+ + G+
Sbjct: 643 LMVQRGM 649
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F + LC+ + A ++ ++ G + + VI G+CK G+ E+A+ KL+
Sbjct: 309 FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI---KLIH 365
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
S LRP+++ Y+ S + G+M A I +E + + V Y ++I GYC + + D
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT 320
+A + + + G ++ LI + C + AE + +K GL L T
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGA-CSRFGSISDAESVFRNMKTEGLKLDVVT 480
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
++++ + RV + A++ + M++ G AV + I YC G ++ E++ ++
Sbjct: 241 SLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY 300
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
G+RPD+ + V G ++ A +L + K V S+I G+CK+ + +EA
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+KL+ F +R N+ Y + ++C D A + E+ E GL
Sbjct: 361 IKLI---HSFRLRPNIFVYSSFLSNIC-STGDMLRASTIFQEIFELGL 404
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F V+ + D A L M P + ++ GYCKA ME+A+ + L
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL 610
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRG 256
GL+PDV Y + GY + G++E A +++ ++ + +H+L+ G
Sbjct: 611 DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 136/307 (44%), Gaps = 11/307 (3%)
Query: 11 FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPE 70
F K+GK + A+++ F + PN F Y + + A + Q++ + +P+
Sbjct: 351 FCKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 71 WYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL 130
++ C + +A + A ++ G P + L+ S+ ++ A V
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG-SISDAESVF 466
Query: 131 KEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA 190
+ + + +L + ++ + + +L+ EM + G P A +N +I
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 191 GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI---LEEAKKKHSVLTP 247
G +++A E++ L RG P + + G+S G+ + A + + + + K V+T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 248 VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHA 307
+L+ GYCK ++ ++A+ L ++ + G++ +V Y+ LI C D E A +L
Sbjct: 587 ---SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC-SVGDIEKACELIG 642
Query: 308 ELKENGL 314
+ + G+
Sbjct: 643 LMVQRGM 649
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F + LC+ + A ++ ++ G + + VI G+CK G+ E+A+ KL+
Sbjct: 309 FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI---KLIH 365
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
S LRP+++ Y+ S + G+M A I +E + + V Y ++I GYC + + D
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT 320
+A + + + G ++ LI + C + AE + +K GL L T
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGA-CSRFGSISDAESVFRNMKTEGLKLDVVT 480
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
++++ + RV + A++ + M++ G AV + I YC G ++ E++ ++
Sbjct: 241 SLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY 300
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
G+RPD+ + V G ++ A +L + K V S+I G+CK+ + +EA
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+KL+ F +R N+ Y + ++C D A + E+ E GL
Sbjct: 361 IKLI---HSFRLRPNIFVYSSFLSNIC-STGDMLRASTIFQEIFELGL 404
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F V+ + D A L M P + ++ GYCKA ME+A+ + L
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL 610
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRG 256
GL+PDV Y + GY + G++E A +++ ++ + +H+L+ G
Sbjct: 611 DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
P +N +I G+CK ++ A M+ + S+G PDV T++ + +GY ++ +I
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 235 LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
E ++ V V Y +LI G+C++ D A LL EM GV + + ++ LC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 295 K 295
K
Sbjct: 128 K 128
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 67/131 (51%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ +++ C+ V AK+++ M + G P F+ +I GYCKA ++ +E+ +
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
RG+ + TY + G+ G+++AA+ +L E + +H ++ G C ++
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 265 EAVKLLTEMKE 275
+A +L ++++
Sbjct: 133 KAFAILEDLQK 143
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 9/258 (3%)
Query: 69 PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALE 128
P+ + L+ C +K+A V ++G + L+ L + VP ALE
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVP-ALE 69
Query: 129 VLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYC 188
VLK + + +++ LC+ + A++ + EM + P F+ +I Y
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 189 KAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPV 248
K G++ + + K++ + P+V+TY+ + G ++ A K+L+ K V
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 249 IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ--------SLCLKAMDWE 300
Y +L G+ K + D+ +KLL +M + GV N + LI+ L L +
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 301 TAEKLHAELKENGLYLKG 318
T+ L ++ + L G
Sbjct: 250 TSNGLIPNIRSYNIVLAG 267
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 1/281 (0%)
Query: 20 ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLV 79
ALEV ++ + PN TY I L + A +M + P + L+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRE 139
K KL + +VYK I++ P + + L+ L N V A+++L +
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNR-VDEAIKMLDLMISKGCT 185
Query: 140 LAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEM 199
+ + + V +L+ +M G N +I GY +AG+++ A+ +
Sbjct: 186 PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGV 245
Query: 200 MKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCK 259
+ S GL P++ +Y ++ +G GE+E A E +K + L + Y +I G CK
Sbjct: 246 FGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCK 305
Query: 260 MEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
EA L ++K V + Y +I L M E
Sbjct: 306 ACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTE 346
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 104/219 (47%), Gaps = 7/219 (3%)
Query: 77 LLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGD 136
L+ LCK + + A V K + G P + + L+ L + A L E+
Sbjct: 54 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLAD-AERRLHEMDSK 112
Query: 137 RRELAKKRFPAVVRALCR---VKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEM 193
+ F A++ A + + V + ++M++M D P ++ +I G C +
Sbjct: 113 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSID---PNVFTYSSLIYGLCMHNRV 169
Query: 194 EQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
++A++M+ L+ S+G P+V TY+ +A+G+ ++ K+L++ ++ V ++L
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
I+GY + + D A+ + M G+ N+ Y+ ++ L
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 268
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 137/306 (44%), Gaps = 33/306 (10%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALY----RRSAFDWALPVCQ 60
N LV ++ G + LE++E+ + +PN+ T + IE L + A D+ + Q
Sbjct: 462 NVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ 521
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYP--PMPYINFLVAKLSQ 118
K PE + + C+ K+A YKA + L +YP YI + L
Sbjct: 522 K------CPE--NKASFVKGYCEAGLSKKA---YKAFVRL-EYPLRKSVYIKLFFS-LCI 568
Query: 119 ENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
E + A +VLK++ R E + ++ A C++ +V A+ L M+ G P
Sbjct: 569 EG-YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLF 627
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGY-----------SNGGE 227
+ +I YC+ E+++A + + ++ RG++PDV TY V+ Y S GE
Sbjct: 628 TYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGE 687
Query: 228 M--EAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEY 285
+ A ++L E L V Y LI CKM ++A +L M + G+ ++ Y
Sbjct: 688 VGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAY 747
Query: 286 DKLIQS 291
LI S
Sbjct: 748 TTLISS 753
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 134/315 (42%), Gaps = 15/315 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I++ ++ + K+ ALE F++F + Y + +AL + + A + Q+M
Sbjct: 355 IVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM 414
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
D +P+ + L+ C K+ +A + I G P + N LV+ L++
Sbjct: 415 KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHE 474
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ LE+ + + + + ++ LC + V A+ + P A F
Sbjct: 475 EEV-LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDF-FSSLEQKCPENKASF-- 530
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYT---YAVIASGYSNGGEMEAARKILEEAK 239
+ GYC+AG ++A + LE LR VY +++ GY +E A +L++
Sbjct: 531 -VKGYCEAGLSKKAYKAFVRLEY-PLRKSVYIKLFFSLCIEGY-----LEKAHDVLKKMS 583
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+ +I +CK+ EA L M E G+ ++ Y +I + C + +
Sbjct: 584 AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC-RLNEL 642
Query: 300 ETAEKLHAELKENGL 314
+ AE L ++K+ G+
Sbjct: 643 QKAESLFEDMKQRGI 657
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 8/193 (4%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
AV+ C+ ++ A + +M+ G + + ++ YCK +A+E K
Sbjct: 323 AVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDM 382
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
+ D Y V S G +E A ++L+E K + V + Y +LI GYC + +A
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGATRALI-- 324
+ L+ EM G+ ++ Y+ L+ L + E E ++ +K G T ++I
Sbjct: 443 LDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE-IYERMKAEGPKPNAVTNSVIIE 501
Query: 325 -----RAVKEMEN 332
R VKE E+
Sbjct: 502 GLCFARKVKEAED 514
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 26/209 (12%)
Query: 55 ALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVA 114
A V +KM R P G ++ CK ++EA ++ +E G P + ++
Sbjct: 575 AHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIH 634
Query: 115 KLSQENETVPLALEVLKEIPGDRRELAKKRFPAVV----------------RALCRVK-D 157
+ NE L+ + + D ++ K P VV C V+ +
Sbjct: 635 TYCRLNE-----LQKAESLFEDMKQRGIK--PDVVTYTVLLDRYLKLDPEHHETCSVQGE 687
Query: 158 VGT--AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTY 215
VG A +++ E A G + +I CK +EQA E+ + GL PD+ Y
Sbjct: 688 VGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAY 747
Query: 216 AVIASGYSNGGEMEAARKILEEAKKKHSV 244
+ S Y G ++ A ++ E KK+++
Sbjct: 748 TTLISSYFRKGYIDMAVTLVTELSKKYNI 776
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN---AVFNFVITGYCKAGEMEQAVEMMK 201
+ + LC + A L+LE+I G+ AV V+ G+C +M+ A ++
Sbjct: 248 YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVII 307
Query: 202 LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKME 261
+E G DVY + Y + A L++ K + VI +++ YCKM+
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 262 QFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
EA++ E ++ + ++ Y+ +L K E A +L E+K+ G+
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYNVAFDALS-KLGRVEEAFELLQEMKDRGI 419
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
+++ LC ++ A QL+ E P F+ +I G+C G+ E+A ++++ +E
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
+ PD T+ ++ SG G +E +LE K K P Y ++ G ++ EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLC----LKAMDW 299
+++++M +G+R + Y K++ LC + MDW
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDW 363
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%)
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
A+E+L +P + K F ++ L K ++ + G N +I
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
G C++G +E A++++ + RP+V T++ + G+ N G+ E A K+LE +K+
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAE 303
+ ++ LI G K + +E + LL MK G N Y +++ L K + E E
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKE 328
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 122/292 (41%), Gaps = 6/292 (2%)
Query: 12 SKLGKGKAALEVFEKFEVFQCEPN---SFTYYLTIEALYRRSA--FDWALPVCQKMLDAR 66
+K G+ K E+ E + E S ++ + +Y A + A+ + M D
Sbjct: 103 NKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFG 162
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P S +L L K E H ++ +A +LG +N L+ L E+ + A
Sbjct: 163 CWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLC-ESGNLEAA 221
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
L++L E P + F ++R C A +L+ M + P FN +I+G
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
K G +E+ +++++ ++ +G P+ TY + G + A++++ + +
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
+ Y ++ G C+ + E +L +M G + K++Q + K D
Sbjct: 342 FLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNND 393
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 41/271 (15%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ +++LGK AA+++ +K E F + FT+ I L AL + +KM
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
A +P ++ + K + + V+ A+++G + N LV S+
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSK------ 399
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
+ E A+K F +V + KDV T +N +I
Sbjct: 400 ----------CGKLEDARKVFDSV-----KNKDVYT-------------------WNSMI 425
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
TGYC+AG +A E+ ++ LRP++ T+ + SGY G+ A + + +K V
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 245 L-TPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
++ +I GY + + DEA++L +M+
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 105/226 (46%), Gaps = 9/226 (3%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+++ L+ ++K G A +VF+ E N FT+ I A R + + + +
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
M+ +P+ + +L ++ ++ I+LG + N ++A ++
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
E + A + + + RE + +V+ A C+ A +L+ EM +G PG +
Sbjct: 231 E-LDFATKFFRRM----RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGG 226
N +I GY + G+ + A+++M+ +E+ G+ DV+T+ + SG + G
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
FP +++ DV K + +I G V N ++ Y K GE++ A + + +
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR 243
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
R DV + + Y G+ E A ++++E +K+ V ++ LI GY ++ + D
Sbjct: 244 ER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 299
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAE 303
A+ L+ +M+ FG+ +V + +I L M ++ +
Sbjct: 300 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALD 338
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N V+ YC+ G+ E+AVE++K +E G+ P + T+ ++ GY+ G+ +AA ++++ +
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN-VDEYDKLIQSLCLKAMD 298
+ ++I G +A+ + +M GV N V + CLK ++
Sbjct: 310 TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVIN 369
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 6/181 (3%)
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
K + ++ + + R AK+ +M+++G P +N ++ G+ + +E A+ +
Sbjct: 221 KSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFED 280
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+++RG+ PD T+ + +G+ +M+ A K+ E K + V Y ++I+GY +++
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL------HAELKENGLYL 316
D+ +++ EM+ G+ N Y L+ LC E L H K+N ++L
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 317 K 317
K
Sbjct: 401 K 401
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 141/329 (42%), Gaps = 11/329 (3%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ S+ K G + ++++F+K + E +Y + + RR + A KM+
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P ++ +L +L+ A ++ G P N ++ + + + A
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK-MDEA 309
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
++ E+ G++ + + +++ V V ++ EM + G P ++ ++ G
Sbjct: 310 EKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPG 369
Query: 187 YCKAGEMEQAVEMMKLLESRGLRP-DVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
C AG+M +A ++K + ++ + P D + + S G+M AA ++L+ +
Sbjct: 370 LCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPA 429
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEM--KEFGVR------VNVDEYDKLIQSLCLKAM 297
Y LI CK ++ A+KLL + KE +R + Y+ +I+ LC
Sbjct: 430 EAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQ 489
Query: 298 DWETAEKLHAELKENGLYLKGATRALIRA 326
+ AE L +L + G+ + A LIR
Sbjct: 490 TAK-AEVLFRQLMKRGVQDQDALNNLIRG 517
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 119/297 (40%), Gaps = 15/297 (5%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L + G+ A F K EP TY L + + + AL + M
Sbjct: 224 NSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKT 283
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPP--MPYINFLVAKLSQENET 122
P+ + ++ C+ KK+ EA ++ ++ K P + Y + L+ +
Sbjct: 284 RGISPDDATFNTMINGFCRFKKMDEAEKLF-VEMKGNKIGPSVVSYTTMIKGYLAVDR-- 340
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADG-PPPGNAVFN 181
V L + +E+ E + ++ LC + AK ++ M+A P N++F
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
++ KAG+M A E++K + + + + Y V+ A K+L+ +K
Sbjct: 401 KLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEK 460
Query: 242 HSVLT--------PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
+L P Y+ +I C Q +A L ++ + GV+ + D + LI+
Sbjct: 461 EIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIR 516
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 35/178 (19%)
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE--- 204
+++ L V + A+ ++L+M G P +F +I Y KAG ++++V++ + ++
Sbjct: 156 MIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLG 215
Query: 205 --------------------------------SRGLRPDVYTYAVIASGYSNGGEMEAAR 232
S G+ P +TY ++ G+ +E A
Sbjct: 216 VERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETAL 275
Query: 233 KILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
+ E+ K + ++++I G+C+ ++ DEA KL EMK + +V Y +I+
Sbjct: 276 RFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIK 333
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 132/283 (46%), Gaps = 18/283 (6%)
Query: 22 EVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWL 81
+ E+ ++ CE + L +E +R +D A+ V M +P ++ ++
Sbjct: 94 RIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMM--- 150
Query: 82 CKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN--------ETVPLALEVLKEI 133
+ V A+E+ + + + NF ++ + + V + + VLK +
Sbjct: 151 ----DVNFKLNVVNGALEI--FEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKI-VLKRM 203
Query: 134 PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEM 193
G+ ++RF ++R CR V A Q++ MI G V++ +++G+ ++GE
Sbjct: 204 IGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEP 263
Query: 194 EQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
++AV++ + G P++ TY + G+ + G ++ A +L + + + V+ + +
Sbjct: 264 QKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLM 323
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
I Y ++ +F+EA K+ T +++ + + + ++ SLCL
Sbjct: 324 IHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 124/322 (38%), Gaps = 19/322 (5%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
LV F + G+ + A+++F K C PN TY I+ D A V K+
Sbjct: 253 LVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEG 312
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAK---LSQENETV 123
P+ ++ + + +EA V+ ++E K P Y + LS + + V
Sbjct: 313 LAPDIVLCNLMIHTYTRLGRFEEARKVF-TSLEKRKLVPDQYTFASILSSLCLSGKFDLV 371
Query: 124 PLALEVLKE----IPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
P + + G+ + AL +V + + K L+
Sbjct: 372 PRITHGIGTDFDLVTGNLLSNCFSKIGYNSYAL-KVLSIMSYKDFALDCYT--------- 421
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+ ++ C+ G A++M K++ D + ++ I G+ A + +
Sbjct: 422 YTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCI 481
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+ L V Y I+G + ++ +EA L +MKE G+ N Y +I LC K +
Sbjct: 482 LEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLC-KEKET 540
Query: 300 ETAEKLHAELKENGLYLKGATR 321
E K+ E + G+ L T+
Sbjct: 541 EKVRKILRECIQEGVELDPNTK 562
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
+++ AL A+ L E+ G P +N ++ GY K G ++ A M+ +E R
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
G+ PD +TY+++ Y N G E+AR +L+E + ++ L+ G+ ++ +
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQSL 292
++L EMK GV+ + Y+ +I +
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTF 454
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 135/332 (40%), Gaps = 13/332 (3%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ + K G K A + + E P+ TY L I+A ++ A V ++M
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P + LL + ++ V K +G P + N ++ + N +
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN-CLD 461
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A+ + + E + + ++ C+ A+++ M G P +N +I
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 185 TGYCKAGEMEQAVEMMKLL---ESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
Y G+ E+ +M +LL +S+G+ P+V T+ + Y G A + LEE K
Sbjct: 522 NSY---GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 578
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
+ +Y++LI Y + ++AV M G++ ++ + LI + D E
Sbjct: 579 GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 638
Query: 302 AEKLHAELKENGLYLKGAT-----RALIRAVK 328
L +KENG+ T +ALIR K
Sbjct: 639 FAVLQY-MKENGVKPDVVTYTTLMKALIRVDK 669
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 101/208 (48%), Gaps = 5/208 (2%)
Query: 105 PMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQL 164
P+ Y N L+ ++ N+ + AL ++ ++ D + + V+++L R + + L
Sbjct: 197 PLTY-NALIGACARNND-IEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLL 254
Query: 165 ML--EMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGY 222
L E+ D + N +I G+ K+G+ +A++++ + ++ GL T I S
Sbjct: 255 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL 314
Query: 223 SNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNV 282
++ G A + EE ++ Y++L++GY K +A +++EM++ GV +
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 283 DEYDKLIQSLCLKAMDWETAEKLHAELK 310
Y LI + + A WE+A + E++
Sbjct: 375 HTYSLLIDAY-VNAGRWESARIVLKEME 401
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 115/278 (41%), Gaps = 13/278 (4%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
++ + L+ F G+ + +V ++ + +P+ Y + I+ + + D A+ +
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDR 469
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
ML P+ + L+ CK + A +++A G P N ++ +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQL------MLEMIADGPPP 175
+ +K + G + ++ P VV V G + + + EM + G P
Sbjct: 530 -----WDDMKRLLGKMK--SQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 176 GNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKIL 235
+ ++N +I Y + G EQAV +++ S GL+P + + + + A +L
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVL 642
Query: 236 EEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
+ K+ V Y +L++ ++++F + + EM
Sbjct: 643 QYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F A++R LC+ K + A+ + + P FN +++G+ + E E E MK
Sbjct: 183 FNALLRTLCQEKSMTDARNV-YHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMK--- 238
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
+GL+PDV TY + Y E+E A K++++ +++ + Y ++I G + Q D
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGATRALI 324
+A ++L EMKE+G +V Y+ I++ C+ A A+KL E+ + GL T L
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCI-ARRLGDADKLVDEMVKKGLSPNATTYNLF 357
Query: 325 RAVKEMENEVVES 337
V + N++ S
Sbjct: 358 FRVLSLANDLGRS 370
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEM---MKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
P + ++ ++ GY K G + M M+ + R PD TY + S + N G M+ A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKE-FGVRVNVDEYDKLIQ 290
R++L E + + Y+ L++GYCK Q D A LL EM E G+ +V Y+ +I
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 291 SLCLKAMDWETAEKLHAELKENGL 314
C+ D A E++ G+
Sbjct: 532 G-CILIDDSAGALAFFNEMRTRGI 554
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMK-LL 203
+ VV A + A+Q++ EM G P +N ++ GYCK ++++A ++++ +
Sbjct: 455 YTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMT 514
Query: 204 ESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQF 263
E G+ PDV +Y +I G + A E + + T + Y +L++ + Q
Sbjct: 515 EDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQP 574
Query: 264 DEAVKLLTE-MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT 320
A ++ E M + V+V++ ++ L++ C + E A+++ + +KENG Y AT
Sbjct: 575 KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGL-IEDAQRVVSRMKENGFYPNVAT 631
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F ++V ++ + + T+ ++ +EM G P +F +I Y KAG+++ A+ + ++
Sbjct: 351 FSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMK 410
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G RP+ Y +I ++ G++E A + ++ +K + TP Y L+ + Q D
Sbjct: 411 KSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVD 470
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
A+K+ M G+R + Y L+ L K + + A K+ E+K G
Sbjct: 471 SAMKIYNSMTNAGLRPGLSSYISLLTLLANKRL-VDVAGKILLEMKAMG 518
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 42/288 (14%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N+L+ F G A E++E E + TY L I +L + D A + Q+M
Sbjct: 282 NNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM-- 339
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIE-LGKYPPMPYINFLVAKLSQENETV 123
K +KL+ + +V+ + ++ +GK +L
Sbjct: 340 ------------------KERKLRPSFSVFSSLVDSMGK----------AGRLDT----- 366
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
+++V E+ G + F +++ + + + TA +L EM G P ++ +
Sbjct: 367 --SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I + K+G++E A+ + K +E G P TY+ + ++ G++++A KI ++
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM--TNA 482
Query: 244 VLTPVI--YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLI 289
L P + Y SL+ D A K+L EMK G V+V D L+
Sbjct: 483 GLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
+ + +I K+G ++ A ++ + ++ R LRP ++ + G ++ + K+ E
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME 373
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
+ + ++ SLI Y K + D A++L EMK+ G R N Y +I+S K+
Sbjct: 374 MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHA-KSG 432
Query: 298 DWETAEKLHAELKENGL 314
E A + ++++ G
Sbjct: 433 KLEVAMTVFKDMEKAGF 449
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+N ++ + G +A E+ + +E D TY +I + G ++AA K+ ++
Sbjct: 280 TYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM 339
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
K++ + ++ SL+ K + D ++K+ EM+ FG R + + LI S KA
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYA-KAGK 398
Query: 299 WETAEKLHAELKENGL 314
+TA +L E+K++G
Sbjct: 399 LDTALRLWDEMKKSGF 414
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 10/233 (4%)
Query: 69 PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALE 128
P+ ++ ++ LC + EAH + + G P N ++A+L V L
Sbjct: 88 PDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVS-TLG 146
Query: 129 VLKEIPGDRRELAKK--RFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
V+ + G ++E + ++ LC + V A +L+ +M G P F +I G
Sbjct: 147 VIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGG 206
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE-----AKKK 241
YC+ E+E A ++ + G+RP+ T +V+ G+ ++E RK+++E +
Sbjct: 207 YCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNET 266
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVD-EYDKLIQSLC 293
+ + + +L+ C+ F++ ++ M VNV+ Y +I SLC
Sbjct: 267 DTSMKAAAFANLVDSMCREGYFNDIFEIAENMS-LCESVNVEFAYGHMIDSLC 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 121/291 (41%), Gaps = 42/291 (14%)
Query: 43 IEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGK 102
++++ R F+ + + M S+ ++ G ++ LC+ ++ A + G
Sbjct: 279 VDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGL 338
Query: 103 YPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRREL--AKKRFPAVVRALCRVKDVGT 160
P N ++ L ++ + A ++L+E G E ++ + ++ +LC+ D G
Sbjct: 339 KPRRTSYNAIIHGLCKDGGCMR-AYQLLEE--GSEFEFFPSEYTYKLLMESLCKELDTGK 395
Query: 161 AK---QLMLE-----------------MIADGPP---------------PGNAVFNFVIT 185
A+ +LML + D P P N VI
Sbjct: 396 ARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVIN 455
Query: 186 GYCKAGEMEQAVEMM-KLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G CK G ++ A++++ ++ + PD T + G G E A +L ++ +
Sbjct: 456 GLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKI 515
Query: 245 LTPVI-YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
V+ Y+++IRG K+ + DEA+ + ++++ V + Y +I LC+
Sbjct: 516 KPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCV 566
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 127/313 (40%), Gaps = 8/313 (2%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ K G A ++ E+ F+ P+ +TY L +E+L + A V + ML
Sbjct: 346 NAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLR 405
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
L LC E V + ++ P +N ++ L + V
Sbjct: 406 KEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGR-VD 464
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQ----LMLEMIADGPPPGNAVF 180
A++VL ++ + + +C + G A++ L M + PG +
Sbjct: 465 DAMKVLDDMMTGK--FCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAY 522
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N VI G K + ++A+ + LE + D TYA+I G +++ A+K ++
Sbjct: 523 NAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIW 582
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
+Y + ++G C+ +A L ++ + G NV Y+ +I + E
Sbjct: 583 PSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKRE 642
Query: 301 TAEKLHAELKENG 313
A ++ E+++NG
Sbjct: 643 -AYQILEEMRKNG 654
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 34/309 (11%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ ++ KLG A V PN +Y +E+ R + A + ++M +
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMP---------YI-----NFL 112
P + +L +G K KEA V++ ++ K P P Y+ N+
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 113 VAK---LSQENETVP---------LALEV-LKEIPGDRRELAKKRF-PAVVRALCRVKDV 158
A+ S + VP ++ E KE+ ++ + P VV +K
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 331
Query: 159 GTAKQ------LMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
G A++ + EM+ G P + +N ++ + +G +EQA + K + + PD+
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 391
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
++Y + S Y N +ME A K + K V Y +LI+GY K ++ +++ +
Sbjct: 392 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 451
Query: 273 MKEFGVRVN 281
M+ G++ N
Sbjct: 452 MRLSGIKAN 460
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 121/296 (40%), Gaps = 15/296 (5%)
Query: 5 NDLVFSFSKLGKG-------KAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALP 57
+DL ++ K+ +G + A V E +P+ + Y IE + A+
Sbjct: 288 SDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVD 347
Query: 58 VCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS 117
V KML R V +L C+ EA+ ++K E N L
Sbjct: 348 VFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALG 407
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
+ + V A+E+ +E+ G + ++ C A LM+EM G P
Sbjct: 408 KLGK-VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDI 466
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
++N + G G ++A E +K++E+RG++P T+ ++ G + GE++ A E
Sbjct: 467 VIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYES 526
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ K S+++G+C D A + + EF + +V Y L SLC
Sbjct: 527 LEHKSRENDA----SMVKGFCAAGCLDHAFERFIRL-EFPLPKSV--YFTLFTSLC 575
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 123/284 (43%), Gaps = 11/284 (3%)
Query: 35 NSFTYYLT-IEALYRRSAFDWALPVCQKMLDARSIPEWYSVG----DLLVWLCKGKKLKE 89
N +YL IE L D A + Q + DA + + +G ++ LC ++++
Sbjct: 250 NPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIED 309
Query: 90 AHAVYKAAIELGKY--PPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPA 147
A +V +++ K+ P Y+ + + ++N +P A++V ++ R+ + +
Sbjct: 310 AESV---VLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSS 366
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
+++ C++ + A L E +N K G++E+A+E+ + + +G
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
+ PDV Y + G G+ A ++ E VIY+ L G EA
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAF 486
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
+ L M+ GV+ ++ +I+ L + A + + AE + L+
Sbjct: 487 ETLKMMENRGVKPTYVTHNMVIEGL-IDAGELDKAEAFYESLEH 529
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 42/228 (18%)
Query: 94 YKAAIELGKYPPMPYINFLVAK---------------------LSQENETVPLALEVLKE 132
++A LG+ P + +NFL+++ L + T L ++ L
Sbjct: 170 FRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWR 229
Query: 133 IPGDRRELAK---------KRFPAV-----VRALCRVKDVGTAKQLM-----LEMIADGP 173
D+ EL K R P V + LC + A L+ ++ D
Sbjct: 230 -NDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKS 288
Query: 174 PPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARK 233
G A + V+ G C +E A ++ +E G+ PDVY Y+ I G+ + A
Sbjct: 289 DLGIA-YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVD 347
Query: 234 ILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
+ + KK + VI S+++ YC+M F EA L E +E + ++
Sbjct: 348 VFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLD 395
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 120/290 (41%), Gaps = 16/290 (5%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
I N L + G + A E + E +P T+ + IE L D A +
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA----EAF 523
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
++ + ++ C L A ++ I L P L L E +
Sbjct: 524 YESLEHKSRENDASMVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDY 580
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A ++L + E K + ++ A CRV +V A++ ++ P +
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTI 640
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I YC+ E +QA + + ++ R ++PDV TY+V+ ++ E++ R++ +
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVL---LNSDPELDMKREM-----EAF 692
Query: 243 SVLTPVIYHS-LIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
V+ V+Y++ +I YC + + L +MK + +V Y L+++
Sbjct: 693 DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 105/236 (44%), Gaps = 17/236 (7%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
++ ++ +L + K A +FE + +P+ TY + + + D L + ++M
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFD 693
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPL- 125
IP+ ++ C LK+ +A++K P + L+ + N + +
Sbjct: 694 VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMK 753
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
A +V ++ + ++ C++ D+G AK++ +MI G P A + +I
Sbjct: 754 AFDVKPDV---------FYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
CK G +++A + + G++PDV Y + +G G + A K+++E +K
Sbjct: 805 CCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEK 860
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 34/309 (11%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ ++ KLG A V PN +Y +E+ R + A + ++M +
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMP---------YI-----NFL 112
P + +L +G K KEA V++ ++ K P P Y+ N+
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 113 VAK---LSQENETVP---------LALEV-LKEIPGDRRELAKKRF-PAVVRALCRVKDV 158
A+ S + VP ++ E KE+ ++ + P VV +K
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 324
Query: 159 GTAKQ------LMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
G A++ + EM+ G P + +N ++ + +G +EQA + K + + PD+
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 384
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
++Y + S Y N +ME A K + K V Y +LI+GY K ++ +++ +
Sbjct: 385 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 444
Query: 273 MKEFGVRVN 281
M+ G++ N
Sbjct: 445 MRLSGIKAN 453
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 9/230 (3%)
Query: 73 SVGDLLVWLCKGKKLKEAHAVYKAAIELGKY--PPMPYINFLVAKLSQENETVPLALEVL 130
S+ LL LCK K++++A V ++L + P N + + N V AL +
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVL---LQLKSHITPNAHTFNIFIHGWCKANR-VEEALWTI 247
Query: 131 KEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA 190
+E+ G + ++R C+ + +++ EM A+G PP + + +++
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 191 GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE-EAKKKHSVLTPVI 249
E E+A+ + ++ G +PD Y + + G +E A ++ E + +
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGV-RVNVDEYDKLIQSLCLKAMD 298
Y+S+I YC ++ D+A++LL EM+ + +V Y L++S C K D
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS-CFKRGD 416
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 70 EWYSVGDLLVWL--CKGKKLKEAHAVYKAAIE-LGKYPPMPYINFLVAKLSQEN-ETVPL 125
+W S +L W CKG K + Y A++ LGK + V ++ + T+
Sbjct: 100 DWRSALGILKWAESCKGHK--HSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNT 157
Query: 126 ALEVLKEIPG-----------DRR-----ELAKKRFPAVVRALCRVKDVGTAKQLMLEMI 169
++++ G DR E + ++ LC+ K V A+ ++L++
Sbjct: 158 VAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK 217
Query: 170 ADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEME 229
+ P + FN I G+CKA +E+A+ ++ ++ G RP V +Y I Y E
Sbjct: 218 SHITPNAHT-FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 230 AARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLI 289
++L E + S + Y +++ ++F+EA+++ T MK G + + Y+ LI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 290 QSLCLKAMDWETAEKL-HAELKENGLYLKGAT 320
+L +A E AE++ E+ E G+ + +T
Sbjct: 337 HTLA-RAGRLEEAERVFRVEMPELGVSINTST 367
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 120/301 (39%), Gaps = 40/301 (13%)
Query: 11 FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPE 70
F+ G+ + A+ +F++ F E N+ + L ++ L + + A V + L + P
Sbjct: 165 FAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPN 223
Query: 71 WYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL 130
++ + CK +++EA + G P + ++ Q+ E + + E+L
Sbjct: 224 AHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV-YEML 282
Query: 131 KEIPGD-------------RRELAKKRFPAVVRALCRVKDVGTA---------------- 161
E+ + A+K F +R R+K G
Sbjct: 283 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARA 342
Query: 162 -------KQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL-RPDVY 213
+ +EM G + +N +I YC E ++A+E++K +ES L PDV+
Sbjct: 343 GRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVH 402
Query: 214 TYA-VIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
TY ++ S + G +E + + E K H L Y LI+ C+ + A L E
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 273 M 273
M
Sbjct: 463 M 463
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 9/230 (3%)
Query: 73 SVGDLLVWLCKGKKLKEAHAVYKAAIELGKY--PPMPYINFLVAKLSQENETVPLALEVL 130
S+ LL LCK K++++A V ++L + P N + + N V AL +
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVL---LQLKSHITPNAHTFNIFIHGWCKANR-VEEALWTI 247
Query: 131 KEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA 190
+E+ G + ++R C+ + +++ EM A+G PP + + +++
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 191 GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE-EAKKKHSVLTPVI 249
E E+A+ + ++ G +PD Y + + G +E A ++ E + +
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGV-RVNVDEYDKLIQSLCLKAMD 298
Y+S+I YC ++ D+A++LL EM+ + +V Y L++S C K D
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS-CFKRGD 416
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 70 EWYSVGDLLVWL--CKGKKLKEAHAVYKAAIE-LGKYPPMPYINFLVAKLSQEN-ETVPL 125
+W S +L W CKG K + Y A++ LGK + V ++ + T+
Sbjct: 100 DWRSALGILKWAESCKGHK--HSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNT 157
Query: 126 ALEVLKEIPG-----------DRR-----ELAKKRFPAVVRALCRVKDVGTAKQLMLEMI 169
++++ G DR E + ++ LC+ K V A+ ++L++
Sbjct: 158 VAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK 217
Query: 170 ADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEME 229
+ P + FN I G+CKA +E+A+ ++ ++ G RP V +Y I Y E
Sbjct: 218 SHITPNAHT-FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 230 AARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLI 289
++L E + S + Y +++ ++F+EA+++ T MK G + + Y+ LI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 290 QSLCLKAMDWETAEKL-HAELKENGLYLKGAT 320
+L +A E AE++ E+ E G+ + +T
Sbjct: 337 HTLA-RAGRLEEAERVFRVEMPELGVSINTST 367
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 120/301 (39%), Gaps = 40/301 (13%)
Query: 11 FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPE 70
F+ G+ + A+ +F++ F E N+ + L ++ L + + A V + L + P
Sbjct: 165 FAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPN 223
Query: 71 WYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVL 130
++ + CK +++EA + G P + ++ Q+ E + + E+L
Sbjct: 224 AHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV-YEML 282
Query: 131 KEIPGD-------------RRELAKKRFPAVVRALCRVKDVGTA---------------- 161
E+ + A+K F +R R+K G
Sbjct: 283 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARA 342
Query: 162 -------KQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL-RPDVY 213
+ +EM G + +N +I YC E ++A+E++K +ES L PDV+
Sbjct: 343 GRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVH 402
Query: 214 TYA-VIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
TY ++ S + G +E + + E K H L Y LI+ C+ + A L E
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 273 M 273
M
Sbjct: 463 M 463
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
Query: 149 VRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL 208
+++LC+ K AK L+ M++ G P ++ +I G+C + E+A ++ K++ +RG
Sbjct: 264 IQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC 323
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVK 268
+PD Y + GG+ E A + +E+ +K+ V + I SL+ G K + +EA +
Sbjct: 324 KPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKE 383
Query: 269 LLTEMKEFGVRVNVDEYDKLIQSL 292
L+ ++KE R NV+ ++++ +L
Sbjct: 384 LIGQVKEKFTR-NVELWNEVEAAL 406
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
+++ C ++ ++ EM G P ++ F +I+G+ + ++ +++ +++ RG
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 252
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
+ V TY + + + A+ +L+ V Y LI G+C + F+EA
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 312
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
KL M G + + + Y LI LC K D+ETA L E E
Sbjct: 313 KLFKIMVNRGCKPDSECYFTLIYYLC-KGGDFETALSLCKESME 355
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 19/270 (7%)
Query: 48 RRSAFD-WALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAI--ELGKYP 104
+R FD W+ +C I + GDL L K++KE +VY ++ ++ Y
Sbjct: 242 KRFKFDTWSYNIC--------IHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYN 293
Query: 105 PMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQL 164
+ ++ L K AL V E+ E + +++ C+ + A ++
Sbjct: 294 SLIHVLCLFGKAKD-------ALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 165 MLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSN 224
EM +G P V+N ++ G KA ++ +A ++ + + G+R +TY ++ G
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 225 GGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDE 284
G EA + + KKK + + + + C+ + + AVKL+ EM+ G V++
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 285 YDKLIQSLCLKAMDWETAEKLHAELKENGL 314
L+ K W+ EKL ++E L
Sbjct: 467 ISSLLIGF-HKQGRWDWKEKLMKHIREGNL 495
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+N +++ + K G + A ++ + D+ TY VI G G + A +L+
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
K+ L V+Y++LI K + DEA +L MK G+ +V Y+ +I+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE 743
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N VI + G++ A ++K ++ GL PDV TY + +GY N G+++ A ++ +E
Sbjct: 168 YNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMS 227
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM-KEFG---VRVNVDEYDKLIQSLCLK 295
K VL V Y ++ G CK + A++LL EM KE G + N Y +IQ+ C K
Sbjct: 228 KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 9/223 (4%)
Query: 112 LVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD 171
+V L + AL VL++ P + V+R D+ A L+ EM
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P + +I GYC AG+++ A + K + + TY+ I G G+ME A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 232 RKILEEAKKKH--SVLTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDK 287
++L E +K+ +++P V Y +I+ +C+ + +EA+ +L M G N
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 288 LIQSLCLKAMDWETAEKLHAEL-KENGLYL----KGATRALIR 325
LIQ + D + KL +L K G+ L AT +LIR
Sbjct: 315 LIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIR 357
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 18/283 (6%)
Query: 23 VFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGD-----L 77
V E + +C N T + + + + D AL V R PE+ D L
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWV------LRKFPEFNVCADTVAYNL 170
Query: 78 LVWLCKGK-KLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGD 136
++ L K L A + K +G YP + ++ + + A + KE+
Sbjct: 171 VIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGK-IDDAWRLAKEMSKH 229
Query: 137 RRELAKKRFPAVVRALCRVKDVGTAKQLMLEM-IADGP---PPGNAVFNFVITGYCKAGE 192
L + ++ +C+ D+ A +L+ EM DG P + VI +C+
Sbjct: 230 DCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRR 289
Query: 193 MEQAVEMMKLLESRGLRPDVYTYAVIASG-YSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
+E+A+ ++ + +RG P+ T V+ G N +++A K++++ K V +
Sbjct: 290 VEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFS 349
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
S +M++++EA K+ M GVR + + + LCL
Sbjct: 350 SATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCL 392
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADG--PPPGNAVFNFVITGYCKAG----------- 191
+ ++ ALCRV + A+ L+ +M G PP + +I+ YC+ G
Sbjct: 203 YNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRR 262
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
M +A M + + RG PDV TY + G + A ++ E+ K K V V Y+
Sbjct: 263 RMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYN 322
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVRV-NVDEYDKLIQSLCLKAMDWETAEKLHAELK 310
S IR Y + + A++++ MK+ G V Y LI +L ++ A L E+
Sbjct: 323 SFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHAL-VETRRAAEARDLVVEMV 381
Query: 311 ENGLYLKGATRALI 324
E GL + T L+
Sbjct: 382 EAGLVPREYTYKLV 395
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLR--PDVYTYAVIASGYSNGGEMEAAR 232
P +N +I C+ G ++A ++ ++ G R PD YTY ++ S Y G R
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 233 KILE----EAKK-------KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
K + EA + + V V Y+ LI G CK + A++L +MK G N
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 282 VDEYDKLIQ 290
Y+ I+
Sbjct: 318 QVTYNSFIR 326
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 109/245 (44%), Gaps = 5/245 (2%)
Query: 74 VGDLLVWLCK----GKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEV 129
G++ +L K K ++ + + +E P ++N ++ L + A E+
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 130 LKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCK 189
K + + +++A C D+ A QL +M+ P + +I G+C+
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR 237
Query: 190 AGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI 249
G++ A+E++ + ++G PD +Y + + ++ A K+L K K V
Sbjct: 238 KGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVH 297
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAEL 309
Y+++I G+C+ ++ +A K+L +M G N Y LI LC + M ++ +K E+
Sbjct: 298 YNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM-FDEGKKYLEEM 356
Query: 310 KENGL 314
G
Sbjct: 357 ISKGF 361
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 2/234 (0%)
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKK-LKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
KML+ P+ + +L L + L++A ++K++ G P N L+
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCL- 202
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
N+ + +A ++ ++ + +++ CR V A +L+ +M+ G P
Sbjct: 203 NDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLS 262
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+ ++ C+ ++ +A +++ ++ +G PD+ Y + G+ ARK+L++
Sbjct: 263 YTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDML 322
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
V Y +LI G C FDE K L EM G + + L++ C
Sbjct: 323 SNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC 376
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 20 ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLV 79
A ++F K P+ +Y + I+ R+ + A+ + ML+ +P+ S LL
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRE 139
LC+ +L+EA+ + G P + + N ++ +E+ + A +VL ++ +
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMD-ARKVLDDMLSNGCS 327
Query: 140 LAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEM 199
+ ++ LC K+ + EMI+ G P +V N ++ G+C G++E+A ++
Sbjct: 328 PNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 387
Query: 200 MKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
++++ G T+ ++ N E E + LE+A K+
Sbjct: 388 VEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKE 429
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
IL+ LV S G + A E+F+ + PN+ +Y L ++A A + KM
Sbjct: 160 ILDVLV---SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
L+ +P+ S L+ C+ ++ A + + G F+ +LS
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG---------FVPDRLS----- 262
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ ++ +LCR + A +L+ M G P +N
Sbjct: 263 ----------------------YTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I G+C+ A +++ + S G P+ +Y + G + G + +K LEE K
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ + L++G+C + +EA ++ + + G ++ D ++ +I +C
Sbjct: 361 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 16/300 (5%)
Query: 3 ILNDLVFSFSKLGKGKA-ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
+ +++V S K G+ + AL FE + + P++ T+ + I L + AL +
Sbjct: 249 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 308
Query: 62 MLDARS--IPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
M + R+ P+ + ++ +++ AV++A + G P + N L+ +
Sbjct: 309 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALC------RVKDVGTAKQLMLEMIADGP 173
+ AL VL +I + P VV C R + G AK++ L M +
Sbjct: 369 GMS-GTALSVLGDIKQN------GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 174 PPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARK 233
P +N +I Y G + +AVE+ + +E G++P+V + + + S +
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 481
Query: 234 ILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+L A+ + L Y+S I Y + ++A+ L M++ V+ + + LI C
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 120/278 (43%), Gaps = 3/278 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + + G+ + A+ + + P+ TY I A + AL VC+KM D
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ + +L G++ +A + ++ P N ++ LS+ ++ A
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS-SQA 302
Query: 127 LEVLKEIPGDRRELAKK--RFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
L++ + R E F +++ ++ + + M+A+G P +N ++
Sbjct: 303 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
Y G A+ ++ ++ G+ PDV +Y + + Y + A+++ +K+
Sbjct: 363 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK 422
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNV 282
V Y++LI Y EAV++ +M++ G++ NV
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 125/305 (40%), Gaps = 3/305 (0%)
Query: 23 VFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLC 82
VFE +PN +Y + A AL V + IP+ S LL
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAK 142
+ ++ +A V+ + + P + N L+ N + A+E+ +++ D +
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS-NGFLAEAVEIFRQMEQDGIKPNV 460
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
++ A R K ++ + G A +N I Y A E+E+A+ + +
Sbjct: 461 VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS 520
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+ + ++ D T+ ++ SG + A L+E + LT +Y S++ Y K Q
Sbjct: 521 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 580
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKG-ATR 321
EA + +MK G +V Y ++ + + W A +L E++ NG+ A
Sbjct: 581 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYN-ASEKWGKACELFLEMEANGIEPDSIACS 639
Query: 322 ALIRA 326
AL+RA
Sbjct: 640 ALMRA 644
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ A++ A R A LM +M+ P + +N +I +G +A+E+ K +
Sbjct: 181 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMT 240
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G+ PD+ T+ ++ S Y +G + A E K ++ +I K+ Q
Sbjct: 241 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 300
Query: 265 EAVKLLTEMKE 275
+A+ L M+E
Sbjct: 301 QALDLFNSMRE 311
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 129/294 (43%), Gaps = 4/294 (1%)
Query: 3 ILNDLVFSFSKLGKGKA-ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
+ +++V S K G+ + AL FE + + P++ T+ + I L + AL +
Sbjct: 117 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 176
Query: 62 MLDARS--IPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
M + R+ P+ + ++ +++ AV++A + G P + N L+ +
Sbjct: 177 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ AL VL +I + + ++ + R + G AK++ L M + P
Sbjct: 237 GMS-GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT 295
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N +I Y G + +AVE+ + +E G++P+V + + + S + +L A+
Sbjct: 296 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 355
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ L Y+S I Y + ++A+ L M++ V+ + + LI C
Sbjct: 356 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 120/278 (43%), Gaps = 3/278 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + + G+ + A+ + + P+ TY I A + AL VC+KM D
Sbjct: 52 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 111
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P+ + +L G++ +A + ++ P N ++ LS+ ++ A
Sbjct: 112 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS-SQA 170
Query: 127 LEVLKEIPGDRRELAKK--RFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
L++ + R E F +++ ++ + + M+A+G P +N ++
Sbjct: 171 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
Y G A+ ++ ++ G+ PDV +Y + + Y + A+++ +K+
Sbjct: 231 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK 290
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNV 282
V Y++LI Y EAV++ +M++ G++ NV
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 140/361 (38%), Gaps = 40/361 (11%)
Query: 4 LNDLVFSFSKLGKGKAALEVFE-------------------------KFEVFQC------ 32
N +++ SKLG+ AL++F K E+ C
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 33 ------EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKK 86
+PN +Y + A AL V + IP+ S LL + ++
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 87 LKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFP 146
+A V+ + + P + N L+ N + A+E+ +++ D +
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGS-NGFLAEAVEIFRQMEQDGIKPNVVSVC 332
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
++ A R K ++ + G A +N I Y A E+E+A+ + + + +
Sbjct: 333 TLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 392
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
++ D T+ ++ SG + A L+E + LT +Y S++ Y K Q EA
Sbjct: 393 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 452
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKG-ATRALIR 325
+ +MK G +V Y ++ + + W A +L E++ NG+ A AL+R
Sbjct: 453 ESIFNQMKMAGCEPDVIAYTSMLHAYN-ASEKWGKACELFLEMEANGIEPDSIACSALMR 511
Query: 326 A 326
A
Sbjct: 512 A 512
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ A++ A R A LM +M+ P + +N +I +G +A+E+ K +
Sbjct: 49 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMT 108
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G+ PD+ T+ ++ S Y +G + A E K ++ +I K+ Q
Sbjct: 109 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 168
Query: 265 EAVKLLTEMKE 275
+A+ L M+E
Sbjct: 169 QALDLFNSMRE 179
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 123/274 (44%), Gaps = 4/274 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSA--FDWALPVCQKMLD 64
++ + + G A+ F++ + P+S T+ I L + + A ++M+
Sbjct: 719 MIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIR 778
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
+ +P+ V D L LC+ K+A + + ++G +P + + L + + +
Sbjct: 779 SGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALCRIGK-LE 836
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
AL L G+R L + + ++V L + D+ A + M G PG V+ +I
Sbjct: 837 EALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLI 896
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
+ K ++E+ +E + +E P V TY + GY + G++E A +++ +
Sbjct: 897 VYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTS 956
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
Y I C+ + ++A+KLL+EM + G+
Sbjct: 957 PDFKTYSKFINCLCQACKSEDALKLLSEMLDKGI 990
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 121/291 (41%), Gaps = 17/291 (5%)
Query: 32 CEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLC--KGKKLKE 89
C T+ + I R + A+ ++M D IP + L+ LC KG+ ++E
Sbjct: 709 CLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEE 768
Query: 90 AHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVV 149
A ++ I G P + + L + T K+ L K FP V
Sbjct: 769 ATRTFREMIRSGFVPDRELVQDYLGCLCEVGNT--------KDAKSCLDSLGKIGFPVTV 820
Query: 150 ------RALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLL 203
RALCR+ + A + + + ++ G + G++++A++ + +
Sbjct: 821 AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSM 880
Query: 204 ESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQF 263
+ G +P V+ Y + + ++E + ++ + + + V Y ++I GY + +
Sbjct: 881 KEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKV 940
Query: 264 DEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+EA M+E G + Y K I LC +A E A KL +E+ + G+
Sbjct: 941 EEAWNAFRNMEERGTSPDFKTYSKFINCLC-QACKSEDALKLLSEMLDKGI 990
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 122/281 (43%), Gaps = 5/281 (1%)
Query: 13 KLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWY 72
K+GKG L VFEK E ++ Y + I +L D AL ++M++
Sbjct: 239 KIGKG---LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLR 295
Query: 73 SVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKE 132
+ LL + K +K+ ++ + + + +L+ + + ALE+++E
Sbjct: 296 TYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGK-IKEALELIRE 354
Query: 133 IPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGE 192
+ L K F +V+ LCR + A ++ ++++ + V+ +I+GY + +
Sbjct: 355 LKNKEMCLDAKYFEILVKGLCRANRMVDALEI-VDIMKRRKLDDSNVYGIIISGYLRQND 413
Query: 193 MEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHS 252
+ +A+E ++++ G P V TY I + E + E + V +
Sbjct: 414 VSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITA 473
Query: 253 LIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
++ G+ + EA K+ + M+E G++ Y ++ LC
Sbjct: 474 VVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELC 514
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 115/289 (39%), Gaps = 4/289 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ S G+G ALE +++ TY + ++ + + D + M+
Sbjct: 263 NIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR 322
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
I E + G LL C K+KEA + + Y LV L + N V
Sbjct: 323 ICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVD 382
Query: 125 LALEVLKEIPGDRRELAKKR-FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
ALE++ + RR+L + ++ R DV A + + G PP + + +
Sbjct: 383 -ALEIVDIMK--RRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEI 439
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
+ K + E+ + + G+ PD + +G+ + A K+ ++K
Sbjct: 440 MQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
T Y ++ C+ ++DE +K+ +M + + D + +I S+
Sbjct: 500 KPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSM 548
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 124/309 (40%), Gaps = 57/309 (18%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
EP T T YR C+ ++ S S L+ L + + EA
Sbjct: 16 EPERSTPIKTTGGQYR---------FCKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQT 66
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
V+K E G P + L+A ++ + + ++ ++ E+ +L F AV+ A
Sbjct: 67 VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSIS-SIVSEVEQSGTKLDSIFFNAVINAF 125
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGY------------------------- 187
++ A Q +L+M G P + +N +I GY
Sbjct: 126 SESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVG 185
Query: 188 -------------CKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEM-----E 229
CK ++E+A E++K +E G+RPD TY IA+ Y GE E
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 230 AARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLI 289
K++ + K K + T I ++ GYC+ + + ++ + MKE V N+ ++ LI
Sbjct: 246 VVEKMVMKEKAKPNGRTCGI---VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 290 QSLCLKAMD 298
++ MD
Sbjct: 303 NGF-VEVMD 310
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 141/366 (38%), Gaps = 63/366 (17%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N ++ +FS+ G + A++ K + P + TY I+ + + + ML
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 64 DARSI---PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+ ++ P + L+ CK KK++EA V K E G P N + Q+
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPA-VVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
ETV EV++++ + R VV CR V + + M V
Sbjct: 238 ETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 180 FNFVITGYCK-------------------------AGEMEQAVEMMKLLESRGLRPDVYT 214
FN +I G+ + G + V+++ L++ ++ DV T
Sbjct: 298 FNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVIT 357
Query: 215 YAVIASGYSNGGEMEAARKILEEAKK--------KHSVLTP------------------- 247
Y+ + + +S+ G ME A ++ +E K +S+L
Sbjct: 358 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 417
Query: 248 -------VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWE 300
VI+ ++I G+C D+A+++ +M +FGV N+ ++ L+ W+
Sbjct: 418 VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWK 477
Query: 301 TAEKLH 306
E L
Sbjct: 478 AEEVLQ 483
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 161 AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLL--ESRGLRPDVYTYAVI 218
A Q+ EM+ G P ++ + GY +A E ++A E+++ L ES RP+V + +
Sbjct: 374 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES---RPNVVIFTTV 430
Query: 219 ASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
SG+ + G M+ A ++ + K + +L+ GY +++Q +A ++L M+ GV
Sbjct: 431 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 490
Query: 279 RVN----------------VDEYDKLIQSLCLKAMDWETAEKLH 306
+ DE +K I +L K ++ EKL+
Sbjct: 491 KPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIEIAKLEKLY 534
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 134/341 (39%), Gaps = 49/341 (14%)
Query: 23 VFEKFEVFQCEPNSFTYYLTIEALYRRSAFD------WALPVCQKMLDARSIPEWYSVGD 76
+ F++ CEP Y I+ L + S + + L V +K SI D
Sbjct: 59 LLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESI-----FRD 113
Query: 77 LLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGD 136
++ +++EA V+ P +N L+ L ++ +++ L E+L +
Sbjct: 114 VIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRM 173
Query: 137 RRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCK------- 189
L + F ++ ALCR+ +V A +L+ M D +++ +++ CK
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCF 233
Query: 190 ------------------------------AGEMEQAVEMMKLLESRGLRPDVYTYAVIA 219
G ++ V ++ ++ + PD+ Y ++
Sbjct: 234 DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVL 293
Query: 220 SGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVR 279
G + A K+ +E Y+ I G CK + A+K+++ M + G
Sbjct: 294 QGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSE 353
Query: 280 VNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT 320
NV Y+ LI++L +KA D A+ L E++ NG+ T
Sbjct: 354 PNVVTYNILIKAL-VKAGDLSRAKTLWKEMETNGVNRNSHT 393
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 129/345 (37%), Gaps = 76/345 (22%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFT------------------------ 38
I D++ ++ G+ + A+EVF K F+C P+++T
Sbjct: 110 IFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVK 169
Query: 39 ------------YYLTIEALYRRSAFDWALPVCQKMLDARSI--PEWYSVGDLLVWLCKG 84
+ + I+AL R D A + + M I P YS LL +CK
Sbjct: 170 ACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYS--RLLSSVCKH 227
Query: 85 KKLKEAHAV-YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRE---- 139
K + Y + ++ P +V + E + VL ++ DR E
Sbjct: 228 KDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLV 287
Query: 140 ---------LAKKRFPAV----------------------VRALCRVKDVGTAKQLMLEM 168
+A + +P + LC+ D+ A ++M M
Sbjct: 288 CYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSM 347
Query: 169 IADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEM 228
G P +N +I KAG++ +A + K +E+ G+ + +T+ ++ S Y E+
Sbjct: 348 NKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEV 407
Query: 229 EAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
A +LEEA + + +I C+ D+AV+LL +
Sbjct: 408 VCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 5/262 (1%)
Query: 34 PNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAV 93
PN T + I+ L + + + ++ R +P L+ + + +++E+ ++
Sbjct: 232 PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSL 291
Query: 94 YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRF--PAVVRA 151
K + + +V ++E + V A +V E+ +R + F VR
Sbjct: 292 LKRLLMKNMVVDTIGYSIVVYAKAKEGDLVS-ARKVFDEML--QRGFSANSFVYTVFVRV 348
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
C DV A++L+ EM G P + FN +I G+ + G E+ +E +++ +RGL P
Sbjct: 349 CCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPS 408
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT 271
+ + S + A +IL ++ K V Y LIRG+ + D+A+KL
Sbjct: 409 CSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFY 468
Query: 272 EMKEFGVRVNVDEYDKLIQSLC 293
EM+ + + + LI LC
Sbjct: 469 EMEYRKMSPGFEVFRSLIVGLC 490
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 143/332 (43%), Gaps = 8/332 (2%)
Query: 2 YILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQK 61
Y N L F + + EK E EP+ TY + + RR A + +
Sbjct: 237 YTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKI 296
Query: 62 MLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
M R +P+ + L+ LCK +++EAH + ++ G P N L+ +E
Sbjct: 297 MYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEG- 355
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPA--VVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ + ++L E+ G+ + RF +V R + +A ++E+ V
Sbjct: 356 MMQQSKKLLHEMLGN--SVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEV 413
Query: 180 FNFVITGYCKAGEMEQAVEMM-KLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+F+I C+ G+ A ++ +++E G TY + S +E A + +
Sbjct: 414 CDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKL 473
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
K ++ VL Y +LI C++ + EA L+ EM + V+ + L+ C K +D
Sbjct: 474 KNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYC-KELD 532
Query: 299 WETAEKLHAELK-ENGLYLKGATRALIRAVKE 329
++ AE+L + E ++ + +L++AV E
Sbjct: 533 FDKAERLLSLFAMEFRIFDPESYNSLVKAVCE 564
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%)
Query: 168 MIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGE 227
M G P FN + +C + + ++ +E G PD+ TY + S Y G
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 228 MEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDK 287
++ A + + ++ V V Y SLI+G CK + EA + M + G++ + Y+
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 288 LIQSLCLKAMDWETAEKLHAEL 309
LI + C + M ++ + LH L
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEML 368
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 113/294 (38%), Gaps = 39/294 (13%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
PN++T+ + S F +KM + P+ + L+ C+ +LKEA
Sbjct: 233 HPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFY 292
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+YK P + + ++++ L
Sbjct: 293 LYKIMYRRRVVPDL------------------------------------VTYTSLIKGL 316
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
C+ V A Q M+ G P +N +I YCK G M+Q+ +++ + + PD
Sbjct: 317 CKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDR 376
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
+T VI G+ G + +A + E ++ + + LI C+ + A LL
Sbjct: 377 FTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDR 436
Query: 273 -MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT-RALI 324
++E G + Y+ LI+SL + E A L +LK L T RALI
Sbjct: 437 IIEEEGHEAKPETYNNLIESLS-RCDAIEEALVLKGKLKNQNQVLDAKTYRALI 489
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 19/238 (7%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRR----SAFDWALPVCQ 60
N L++++ K G + + ++ + P+ FT + +E R SA ++ + + +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 61 KMLDARSIPEWYSVGD-LLVWLCK-GKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQ 118
+D IP + V D L+V LC+ GK H + + E G N L+ LS+
Sbjct: 405 LKVD---IP--FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSR 459
Query: 119 ENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+ + AL + ++ + L K + A++ LCR+ A+ LM EM P +
Sbjct: 460 -CDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSF 518
Query: 179 VFNFVITGYCKAGEMEQAVEMMKL--LESRGLRPDVYTYAVIA-----SGYSNGGEME 229
+ ++ GYCK + ++A ++ L +E R P+ Y V A GY E++
Sbjct: 519 ICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQ 576
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 114/289 (39%), Gaps = 5/289 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ K G+ + A + F + +P+ +Y I A + + + +ML
Sbjct: 312 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 371
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+P+ ++ ++ + +L A L P +FL+ L QE + P A
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGK--PFA 429
Query: 127 LEVLKE--IPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
+ L + I + E + + ++ +L R + A L ++ + +I
Sbjct: 430 AKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALI 489
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
C+ G +A +M + ++PD + + GY + + A ++L + +
Sbjct: 490 GCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRI 549
Query: 245 LTPVIYHSLIRGYCKME-QFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
P Y+SL++ C+ + +A++L M+ G N LIQ L
Sbjct: 550 FDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
V A+E+ +E + + + F A++R LC V AK + P + +N
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSV-FNAKKGNIPFDSCSYNI 260
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I+G+ K GE+E+ +++K + G PD +Y+ + G G + + +I + K K
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+V +Y+++I + FDE+++ M + N++ Y KL+ L
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGL 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 101/235 (42%), Gaps = 3/235 (1%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + G+ ++E+F+ + P++ Y I FD ++ ++MLD
Sbjct: 296 LIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE 355
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYI-NFLVAKLSQENETVPL 125
P + L+ L KG+K+ +A +++ + G P + +FL S +
Sbjct: 356 CEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAM 415
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
+ G R +++ + +++ L R G + EM G P V+ +++
Sbjct: 416 VIYQKSRKAGCR--ISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVD 473
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
G C G +E AV +M+ +G P+ + Y+ ++S + E A K+ + KK
Sbjct: 474 GLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKK 528
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPP--PGNAVFNFVITGYCKAGEMEQAVEMMKL 202
F A++ A + V A ++ EM A+ P P + ++ C AG++E+A E+ ++
Sbjct: 575 FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQM 634
Query: 203 LESRGLR--PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR--GYC 258
+ G+R P+VYT AV + S G+ + A I ++ K+K V + +LI G+
Sbjct: 635 IHKYGIRGTPEVYTIAV--NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 259 KMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKG 318
KM DEA +L + K G+R+ Y L+ + C A DW+ A +L+ ++K L
Sbjct: 693 KM--LDEAFGILQDAKSQGIRLGTISYSSLMGA-CCNAKDWKKALELYEKIKSIKLRPTI 749
Query: 319 AT-RALIRAVKE 329
+T ALI A+ E
Sbjct: 750 STMNALITALCE 761
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 104 PPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQ 163
P M N L++ + ++ + A VL+ + K + ++ + + V +
Sbjct: 465 PTMSTFNMLMS-VCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE 523
Query: 164 LMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYS 223
+ +M G F +I G +AG++ +A +L S+ ++PD + + S
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACG 583
Query: 224 NGGEMEAARKILEEAKKKHSVLTP--VIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
G ++ A +L E K + + P + +L++ C Q + A ++ + ++G+R
Sbjct: 584 QSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGT 643
Query: 282 VDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
+ Y + S C K+ DW+ A ++ ++KE
Sbjct: 644 PEVYTIAVNS-CSKSGDWDFACSIYKDMKE 672
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 123/295 (41%), Gaps = 4/295 (1%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
++ L+ ++ G+ A + +P+ + I A + A D A V
Sbjct: 537 LHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLA 596
Query: 61 KM-LDARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQ 118
+M + I P+ S+G L+ C +++ A VY+ + G P + +
Sbjct: 597 EMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYG-IRGTPEVYTIAVNSCS 655
Query: 119 ENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
++ A + K++ + F A++ K + A ++ + + G G
Sbjct: 656 KSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTI 715
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
++ ++ C A + ++A+E+ + ++S LRP + T + + G ++ A + L+E
Sbjct: 716 SYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEI 775
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
K + Y L+ + + F+ + KLL++ K GV N+ + I SLC
Sbjct: 776 KTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMC-RCITSLC 829
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 129/290 (44%), Gaps = 6/290 (2%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N ++ + SK A +VF+K + + EP+ +Y + +E + V ++M
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYI-NFLVAKLSQENET 122
D P+ + G ++ CK KK +EA + +E P P+I L+ L E +
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE-MEQRNCKPSPHIFCSLINGLGSEKK- 317
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ ALE + L + A+V A C + + A + + EM G P ++
Sbjct: 318 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 377
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ + M+++ E ++ ++ P V TY ++ + N ++ A KI +E K K
Sbjct: 378 ILHHLIR---MQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 434
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ ++ SLI C + DEA + EM + G+R + +L Q+L
Sbjct: 435 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTL 484
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 1/210 (0%)
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAK 142
+ +K+KEA + E G N ++ LS+ + V A +V ++ R E
Sbjct: 174 RARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSK-SRNVGDAQKVFDKMKKKRFEPDI 232
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
K + ++ + ++ ++ EM +G P + +I +CKA + E+A+
Sbjct: 233 KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+E R +P + + + +G + ++ A + E +K L Y++L+ YC ++
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
++A K + EM+ GV N YD ++ L
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHL 382
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 121/293 (41%), Gaps = 5/293 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ G + A+ ++ C P TY + +E + R A+ V + M
Sbjct: 213 NTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV 272
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELG-KYPPMPYINFLVAKLSQEN-ET 122
P+ + L+ + C+ L+E +V + + G + + Y L + S E +
Sbjct: 273 EGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDE 332
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
V L ++ + + + ++ LC+ + + A +M+ P +N
Sbjct: 333 VEEILNIMYQTSYCPTVIT---YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
V+ K G ++ A+E++ LL++ P + TY + G + G M+ A ++ +
Sbjct: 390 VLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG 449
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLK 295
+ SLI G+C+ +EA ++L E G + Y +IQ LC K
Sbjct: 450 IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKK 502
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 13/279 (4%)
Query: 20 ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLV 79
A+EV E V C P+ TY + RR + V Q +L + LL
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRE 139
LC + E + + P + N L+ L + + A++ ++
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKA-RLLSRAIDFFYQM------ 375
Query: 140 LAKKRFPAVVR------ALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEM 193
L +K P +V A+ + V A +L+ + PPG +N VI G K G M
Sbjct: 376 LEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLM 435
Query: 194 EQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
++A+E+ + G+ PD T + G+ +E A ++L+E + + + Y +
Sbjct: 436 KKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLV 495
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
I+G CK ++ + A++++ M G + + Y +++ +
Sbjct: 496 IQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 55 ALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVA 114
A + + M +P + S +L+ L + +L +A + + + G P N ++
Sbjct: 123 ACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIG 182
Query: 115 KLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLML---EMIAD 171
L ++ + AL +L+++ + V+R + D G A+Q + + + +
Sbjct: 183 NLCKKGH-IRTALVLLEDMSLSGSPPDVITYNTVIRCM---FDYGNAEQAIRFWKDQLQN 238
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G PP + ++ C+ +A+E+++ + G PD+ TY + + G +E
Sbjct: 239 GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 298
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+++ L V Y++L+ C E +DE ++L M + V Y+ LI
Sbjct: 299 ASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILING 358
Query: 292 LC 293
LC
Sbjct: 359 LC 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 1/266 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N LV + G + V + E N+ TY + +L +D + M
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P + L+ LCK + L A + +E P + N ++ +S+E V
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG-MVD 401
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
A+E+L + + +V+ L + + A +L +M+ G P + +I
Sbjct: 402 DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
G+C+A +E+A +++K +RG TY ++ G E+E A +++E
Sbjct: 462 YGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCK 521
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLL 270
IY ++++G +M EAV+L
Sbjct: 522 PDETIYTAIVKGVEEMGMGSEAVQLQ 547
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 119/274 (43%), Gaps = 4/274 (1%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ + S+ A++VFE E +C+P+ +TY I ++Y R L+
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI-SVYGRCGLAAEAERLFMELE 359
Query: 65 ARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
+ P+ + LL + + ++ VY+ ++G N ++ ++ + +
Sbjct: 360 LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ-L 418
Query: 124 PLALEVLKEIPG-DRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
LAL++ K++ G R + ++ +L + A LM EM+ G P ++
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSA 478
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I GY KAG+ E+A + + G +PD Y+V+ G E A + +
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEF 276
+ +Y +I G K + D+ K + +M+E
Sbjct: 539 HTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL 572
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 134/322 (41%), Gaps = 17/322 (5%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEV----FQCEPNSFTYYLTIEALYRRSAFDWALPV 58
+ +V + KLG + A +V + E F C P Y IEA ++ + A V
Sbjct: 718 VCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESV 774
Query: 59 CQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQ 118
+ + P+ + L+ + + A A++ + G P + IN L+ L
Sbjct: 775 VGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCV 834
Query: 119 ENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+ L + V++E+ +++K ++ A R ++ K++ M A G P
Sbjct: 835 DGRLEELYV-VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIR 893
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
++ +I CK + A M+ +E + ++ + + Y+ + + ++ +
Sbjct: 894 LYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRI 953
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL----CL 294
K+ Y++LI YC+ + +E L+ +M+ G+ +D Y LI + CL
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 295 KAMDWETAEKLHAELKENGLYL 316
E AE+L EL GL L
Sbjct: 1014 -----EQAEQLFEELLSKGLKL 1030
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLV-AKLSQENETVPLALEVLKEIPGDRRELA 141
+ K +A + A + G P + N L+ A+L T LA+E+L +
Sbjct: 237 RSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPD 296
Query: 142 KKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMK 201
+ ++ A R ++ A ++ +M A P +N +I+ Y + G +A +
Sbjct: 297 AITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFM 356
Query: 202 LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKME 261
LE +G PD TY + ++ E +++ ++ +K + Y+++I Y K
Sbjct: 357 ELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQG 416
Query: 262 QFDEAVKLLTEMKEFGVRVNVD--EYDKLIQSL 292
Q D A++L +MK R N D Y LI SL
Sbjct: 417 QLDLALQLYKDMKGLSGR-NPDAITYTVLIDSL 448
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 72/134 (53%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ +++ A + K + A+QL E+++ G + ++ ++ +G +A +++++++
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
+ G+ P + T ++ YS+ G + A K+L K LT + Y S+I Y + + ++
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYN 1119
Query: 265 EAVKLLTEMKEFGV 278
++ L EMK+ G+
Sbjct: 1120 SGIERLLEMKKEGL 1133
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 117/280 (41%), Gaps = 19/280 (6%)
Query: 20 ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSA-FDWALPVCQKMLDARSIPEWYSVGDLL 78
A+E+F + E + Y + +Y RS F A + M +P+ S L+
Sbjct: 210 AVEIFTRAE--PTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLI 267
Query: 79 VWLCKGKKLKEAHAVYKAAIEL-------GKYPPMPYINFLVAKLSQENETVPLALEVLK 131
+LK A+EL G P N L++ S+++ + A++V +
Sbjct: 268 -----NARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDS-NLDGAVKVFE 321
Query: 132 EIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAG 191
++ R + + A++ R A++L +E+ G P +N ++ + +
Sbjct: 322 DMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARER 381
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTP--VI 249
E+ E+ + ++ G D TY I Y G+++ A ++ ++ K S P +
Sbjct: 382 NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG-LSGRNPDAIT 440
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLI 289
Y LI K + EA L++EM + G++ + Y LI
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 2/234 (0%)
Query: 81 LCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRREL 140
LCKGK++++A + E + N ++ K+ E ++V + I E
Sbjct: 902 LCKGKRVRDAEIMVSEMEEANFKVELAIWNSML-KMYTAIEDYKKTVQVYQRIKETGLEP 960
Query: 141 AKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMM 200
+ + ++ CR + LM +M G P + +I+ + K +EQA ++
Sbjct: 961 DETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLF 1020
Query: 201 KLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKM 260
+ L S+GL+ D Y + + G A K+L+ K T H L+ Y
Sbjct: 1021 EELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSS 1080
Query: 261 EQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
EA K+L+ +K+ V + Y +I + L++ D+ + + E+K+ GL
Sbjct: 1081 GNPQEAEKVLSNLKDTEVELTTLPYSSVIDAY-LRSKDYNSGIERLLEMKKEGL 1133
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 3/198 (1%)
Query: 130 LKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCK 189
LK PG + + + +V L R K G +L+ EM+ DG P +N +I Y +
Sbjct: 354 LKRQPGFKHD--GHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 190 AGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI 249
A + +A+ + ++ G +PD TY + ++ G ++ A + + +
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAEL 309
Y +I K A KL EM + G N+ Y+ ++ L KA +++ A KL+ ++
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDM 530
Query: 310 KENGLYLKGATRALIRAV 327
+ G T +++ V
Sbjct: 531 QNAGFEPDKVTYSIVMEV 548
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 117/289 (40%), Gaps = 37/289 (12%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ S+ + A+ VF + + C+P+ TY I+ + D A+ + Q+M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P+ ++ ++ L K L AH ++ ++ G P + N ++ L +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM-DLHAKARNYQ 521
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
AL++ +++ E K + V+ L + A+ + EM P V+ ++
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
+ KAG +E+A + + + GLRP+V T
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPT------------------------------ 611
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+SL+ + ++ + EA +LL M G+R ++ Y L+ S C
Sbjct: 612 -----CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCC 654
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 105/261 (40%), Gaps = 36/261 (13%)
Query: 32 CEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAH 91
C+PN+ TY I + R + + A+ V +M +A P+ + L+ K L A
Sbjct: 395 CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 92 AVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
+Y+ ++ G P + + ++
Sbjct: 455 DMYQ-RMQAGGLSPDTFT-----------------------------------YSVIINC 478
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
L + + A +L EM+ G P +N ++ + KA + A+++ + +++ G PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT 271
TY+++ + G +E A + E ++K+ + +Y L+ + K ++A +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 272 EMKEFGVRVNVDEYDKLIQSL 292
M G+R NV + L+ +
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTF 619
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 3/198 (1%)
Query: 130 LKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCK 189
LK PG + + + +V L R K G +L+ EM+ DG P +N +I Y +
Sbjct: 354 LKRQPGFKHD--GHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 190 AGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI 249
A + +A+ + ++ G +PD TY + ++ G ++ A + + +
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAEL 309
Y +I K A KL EM + G N+ Y+ ++ L KA +++ A KL+ ++
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDM 530
Query: 310 KENGLYLKGATRALIRAV 327
+ G T +++ V
Sbjct: 531 QNAGFEPDKVTYSIVMEV 548
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 117/289 (40%), Gaps = 37/289 (12%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ S+ + A+ VF + + C+P+ TY I+ + D A+ + Q+M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P+ ++ ++ L K L AH ++ ++ G P + N ++ L +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM-DLHAKARNYQ 521
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
AL++ +++ E K + V+ L + A+ + EM P V+ ++
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
+ KAG +E+A + + + GLRP+V T
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPT------------------------------ 611
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+SL+ + ++ + EA +LL M G+R ++ Y L+ S C
Sbjct: 612 -----CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCC 654
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 105/261 (40%), Gaps = 36/261 (13%)
Query: 32 CEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAH 91
C+PN+ TY I + R + + A+ V +M +A P+ + L+ K L A
Sbjct: 395 CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 92 AVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
+Y+ ++ G P + + ++
Sbjct: 455 DMYQ-RMQAGGLSPDTFT-----------------------------------YSVIINC 478
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
L + + A +L EM+ G P +N ++ + KA + A+++ + +++ G PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT 271
TY+++ + G +E A + E ++K+ + +Y L+ + K ++A +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 272 EMKEFGVRVNVDEYDKLIQSL 292
M G+R NV + L+ +
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTF 619
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 3/198 (1%)
Query: 130 LKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCK 189
LK PG + + + +V L R K G +L+ EM+ DG P +N +I Y +
Sbjct: 354 LKRQPGFKHD--GHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 190 AGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI 249
A + +A+ + ++ G +PD TY + ++ G ++ A + + +
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAEL 309
Y +I K A KL EM + G N+ Y+ ++ L KA +++ A KL+ ++
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDM 530
Query: 310 KENGLYLKGATRALIRAV 327
+ G T +++ V
Sbjct: 531 QNAGFEPDKVTYSIVMEV 548
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 117/289 (40%), Gaps = 37/289 (12%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ S+ + A+ VF + + C+P+ TY I+ + D A+ + Q+M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
P+ ++ ++ L K L AH ++ ++ G P + N ++ L +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM-DLHAKARNYQ 521
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
AL++ +++ E K + V+ L + A+ + EM P V+ ++
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
+ KAG +E+A + + + GLRP+V T
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPT------------------------------ 611
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+SL+ + ++ + EA +LL M G+R ++ Y L+ S C
Sbjct: 612 -----CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCC 654
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 105/261 (40%), Gaps = 36/261 (13%)
Query: 32 CEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAH 91
C+PN+ TY I + R + + A+ V +M +A P+ + L+ K L A
Sbjct: 395 CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 92 AVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
+Y+ ++ G P + + ++
Sbjct: 455 DMYQ-RMQAGGLSPDTFT-----------------------------------YSVIINC 478
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
L + + A +L EM+ G P +N ++ + KA + A+++ + +++ G PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT 271
TY+++ + G +E A + E ++K+ + +Y L+ + K ++A +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 272 EMKEFGVRVNVDEYDKLIQSL 292
M G+R NV + L+ +
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTF 619
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
Query: 130 LKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCK 189
LK PG + + + +V L R K G +L+ EM+ DG P +N +I Y +
Sbjct: 349 LKRQPGFKHD--GHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGR 406
Query: 190 AGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI 249
A +++A+ + ++ G PD TY + ++ G ++ A + + ++
Sbjct: 407 ANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFT 466
Query: 250 YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAEL 309
Y +I K A +L EM G N+ ++ +I +L KA ++ETA KL+ ++
Sbjct: 467 YSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI-ALHAKARNYETALKLYRDM 525
Query: 310 KENGLYLKGATRALIRAV 327
+ G T +++ V
Sbjct: 526 QNAGFQPDKVTYSIVMEV 543
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ S+ + K A+ VF + + CEP+ TY I+ + D A+ + Q+M +
Sbjct: 398 NRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQE 457
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
A P+ ++ ++ L K L AH ++ + G P + N ++A L +
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA-LHAKARNYE 516
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
AL++ +++ + K + V+ L + A+ + EM P V+ ++
Sbjct: 517 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLV 576
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
+ KAG +++A + + + GLRP+V T + S + M A +L+
Sbjct: 577 DLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQS 629
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 107/261 (40%), Gaps = 36/261 (13%)
Query: 32 CEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAH 91
C+PN+ TY I + R + A+ V +M +A P+ + L+ K L A
Sbjct: 390 CKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAM 449
Query: 92 AVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
+Y+ E G LS + T + ++
Sbjct: 450 DMYQRMQEAG--------------LSPDTFT----------------------YSVIINC 473
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
L + + A +L EM+ G P FN +I + KA E A+++ + +++ G +PD
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT 271
TY+++ + G +E A + E ++K+ V +Y L+ + K D+A +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 272 EMKEFGVRVNVDEYDKLIQSL 292
M + G+R NV + L+ +
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTF 614
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL-- 202
+ +++ L + D A+++ EM++DG PP +N ++ G CK G++E+A+ K+
Sbjct: 19 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVED 78
Query: 203 -------LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
L +G++P+V TY + SG+ G E A + + K+ + Y++LIR
Sbjct: 79 GWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR 138
Query: 256 GYCKMEQFDEAVKLLTEMK 274
+ + + +L+ EM+
Sbjct: 139 AHLRDGDKAASAELIKEMR 157
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 163 QLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGY 222
+L EM G + +I G +AG+ + A E+ K + S G+ PD+ TY ++ G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 223 SNGGEMEAA--RKILEEAKKKHSVLT-------PVIYHSLIRGYCKMEQFDEAVKLLTEM 273
G++E A +E+ L+ V Y ++I G+CK +EA L +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 274 KEFGVRVNVDEYDKLIQS 291
KE G + Y+ LI++
Sbjct: 122 KEDGPLPDSGTYNTLIRA 139
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 116/282 (41%), Gaps = 2/282 (0%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
+P+ TY + A R D A V + M D +P+ + L+ K ++L++
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 93 VYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRAL 152
+ G P + N L+ ++ ++ A+ V ++ + ++
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSG-SIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 153 CRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDV 212
+ +QL LEM + P A +N +I + + G ++ V + + + PD+
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 213 YTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTE 272
TY I GG E ARKIL+ V + Y +I + + ++EA+
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 482
Query: 273 MKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
M E G +++ + L+ S + E+ E + + L ++G+
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKES-EAILSRLVDSGI 523
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 125/306 (40%), Gaps = 40/306 (13%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N L+ +++K G K A+ VF + + C PN+ TY + + + +D + +M
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPM-PYINFLVA--------- 114
+ + P+ + L+ +G KE ++ +E P M Y + A
Sbjct: 381 SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHED 440
Query: 115 --KLSQ---ENETVP----------------------LALEVLKEIPGDRRELAKKRFPA 147
K+ Q N+ VP +A + E+ + + + F +
Sbjct: 441 ARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP---SIETFHS 497
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
++ + R V ++ ++ ++ G P FN I Y + G+ E+AV+ +E
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
PD T + S YS ++ R+ EE K + + + Y ++ Y K E++D+
Sbjct: 558 CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVN 617
Query: 268 KLLTEM 273
+LL EM
Sbjct: 618 ELLEEM 623
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 1/166 (0%)
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
LEV E+P + + A++ A R T+ +L+ M + P +N VI
Sbjct: 161 LEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA 220
Query: 187 YCKAG-EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
+ G + E + + + G++PD+ TY + S + G + A + V
Sbjct: 221 CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVP 280
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
Y L+ + K+ + ++ LL EM G ++ Y+ L+++
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 1/231 (0%)
Query: 32 CEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAH 91
CE F Y + L + + D + +M+ P ++ L + CK + EA
Sbjct: 353 CELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEAL 412
Query: 92 AVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRA 151
+Y++ E+G P N+L+ L NE+V A +VLK L K F + A
Sbjct: 413 ELYRSRSEIGFAPTAMSYNYLIHTLCA-NESVEQAYDVLKGAIDRGHFLGGKTFSTLTNA 471
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
LC A++L++ P +I+ C G++E A+ + +L G+
Sbjct: 472 LCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTS 531
Query: 212 VYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+ + G + A K++ ++K T +Y ++I+ C+ME
Sbjct: 532 FKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMES 582
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 117/309 (37%), Gaps = 38/309 (12%)
Query: 7 LVFSFSKLGKGKAALEVFEKF-EVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDA 65
++ + K G A+E+F + C+ Y + AL F A + ++M+
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 66 RSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPL 125
P+ + L+ C K+KEA G PP
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPP-------------------- 251
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
A+ R ++ L + +AK+++ +M G P FN +I
Sbjct: 252 ---------------ARGR-DLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIE 295
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
K+GE+E +EM GL D+ TY + S G+++ A ++L +
Sbjct: 296 AISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKP 355
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
P +Y +I+G C+ FD+A ++MK N Y LI ++C + + A
Sbjct: 356 FPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI-TMCGRGGKFVDAANY 414
Query: 306 HAELKENGL 314
E+ E GL
Sbjct: 415 LVEMTEMGL 423
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 89/228 (39%), Gaps = 1/228 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
LV + GK K A E ++ P + L IE L + A + KM
Sbjct: 223 LVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGG 282
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
+P+ + L+ + K +++ +Y A +LG + L+ +S+ + + A
Sbjct: 283 FVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK-IDEA 341
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
+L D + + +++ +CR A +M PP V+ +IT
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITM 401
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
+ G+ A + + GL P + ++ G NGG+ + A +I
Sbjct: 402 CGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 4/291 (1%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
LN ++ F G+ + +++FE + Q S + Y + AL + Q +
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQ--QHGKISVSTYSSCIKFVGAKNVSKALEIYQSIP 158
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
D + Y +L L K KL ++ G P + N L+A +
Sbjct: 159 DESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGY 218
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGT-AKQLMLEMIADGPPPGNAVFNF 182
P A+E++ E+P + ++ + V+ A+C A+ + +M +G P ++
Sbjct: 219 PKAIELIGELPHNGIQMDSVMYGTVL-AICASNGRSEEAENFIQQMKVEGHSPNIYHYSS 277
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ Y G+ ++A E+M ++S GL P+ + Y GG + +R++L E +
Sbjct: 278 LLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAG 337
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ Y L+ G K + +EA + +MK GVR + +I +LC
Sbjct: 338 YAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALC 388
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/333 (16%), Positives = 146/333 (43%), Gaps = 12/333 (3%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYR-RSAFDWALPVC 59
+YI N ++ K GK + +++F++ + +P+ TY + + ++ + A+ +
Sbjct: 166 VYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELI 225
Query: 60 QKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
++ + G +L + +EA + G P + + + L+ S +
Sbjct: 226 GELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWK 285
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ A E++ E+ K +++ + +++L+ E+ + G
Sbjct: 286 GD-YKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMP 344
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+ ++ G KAG++E+A + ++ +G+R D Y +++ S + A+++ +++
Sbjct: 345 YCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSE 404
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC---LKA 296
+ V+ ++++ YC+ + + ++++ +M E V + + + LI+ L
Sbjct: 405 TTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHL 464
Query: 297 MDWETAEKLHA-------ELKENGLYLKGATRA 322
+ ++T +H+ EL + +Y G RA
Sbjct: 465 LAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRA 497
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 109 INFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEM 168
+N L+ L +EN ++ A EV ++ D + + F ++ C+ + A+ +M M
Sbjct: 242 MNSLMDALVKEN-SIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLM 299
Query: 169 IADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEM 228
P + + YCK G+ + EM++ + G P+V TY ++ ++
Sbjct: 300 KVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQV 359
Query: 229 EAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
A + E+ K+ V Y SLI K +F +A ++ +M GVR +V Y+ +
Sbjct: 360 AEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTM 419
Query: 289 IQSLCLKAMD 298
I + + D
Sbjct: 420 ISAALHHSRD 429
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
+++ AL + + A ++ L++ D P FN +I G+CKA + + A MM L++
Sbjct: 244 SLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVT 302
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
PDV TY Y G+ ++LEE ++ V Y ++ K +Q EA
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEA 362
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG------LYLKGAT 320
+ + +MKE G + Y LI L K ++ A ++ ++ G +Y +
Sbjct: 363 LGVYEKMKEDGCVPDAKFYSSLIHILS-KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMIS 421
Query: 321 RAL--------IRAVKEMENEVVES 337
AL +R +K ME+E ES
Sbjct: 422 AALHHSRDEMALRLLKRMEDEEGES 446
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 116/302 (38%), Gaps = 42/302 (13%)
Query: 13 KLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWY 72
K+GK + A+ +F+ + F C + FT I AL R AL V D S E
Sbjct: 150 KVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELS 209
Query: 73 SVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET------VPLA 126
LL + +KEA V + G P + N L+ L + N VP A
Sbjct: 210 VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEA 269
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
L ++ E+ + + + ++ L R + V + Q++ +M G P + FV+
Sbjct: 270 LNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRV 329
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
G + +++ + RG RP+ RK
Sbjct: 330 LYLTGRFGKGNQIVDEMIERGFRPE--------------------RK------------- 356
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH 306
Y+ LI C +E+ + A++L +MK V YD LI LC K ++E +L
Sbjct: 357 --FYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLC-KGGNFEKGRELW 413
Query: 307 AE 308
E
Sbjct: 414 EE 415
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%)
Query: 140 LAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEM 199
L K F V+R L KD + L+ ++ + F+ V K G+ E A+ +
Sbjct: 101 LHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGI 160
Query: 200 MKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCK 259
K+L+ D +T I S + G ++ A ++ K S +Y SL+ G+
Sbjct: 161 FKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSV 220
Query: 260 MEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
EA +++ +MK G+ ++ ++ L+ LC + ++
Sbjct: 221 QRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVN 259
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESR-GLRPDVYTYAVIASGYSNGGEMEAARK 233
P FN ++ + + GE E + + +E G P+VY+Y V+ Y G M A K
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 234 ILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ EE K + V V Y+++I G C + +A +L +M G+ Y+ L+ C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 294 LKAMDWETAEKLHAELKENGLYLKGAT 320
KA D ++ ++ E+K G G T
Sbjct: 363 -KAGDVDSGLVVYREMKRKGFEADGLT 388
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P +N ++ YC G M +A ++ + ++ RG+ D+ Y + G + E+ A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
+++ + K T + Y L+ GYCK D + + EMK G + + L++
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 292 LC 293
LC
Sbjct: 396 LC 397
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F + CRV+D A +L+ EMI G P N + I +C+AG +++A ++ +
Sbjct: 271 FNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMI 330
Query: 205 SRGLR---PDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKME 261
++G P T+A++ + + E +++ + Y +I G C E
Sbjct: 331 TKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAE 390
Query: 262 QFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ DEA K L EM G ++ Y+ ++ LC
Sbjct: 391 KVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLC 422
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 5/234 (2%)
Query: 60 QKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
+K + ++ PE + LL LCK +KE A+ + K P N L +
Sbjct: 223 RKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVK-PDANTFNVLFFGWCRV 281
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPP---PG 176
+ A+++L+E+ + + A + C+ V A L MI G P
Sbjct: 282 RDPKK-AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT 340
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
F +I K + E+ E++ + S G PDV TY + G +++ A K L+
Sbjct: 341 AKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLD 400
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
E K V Y+ +R C+ + DEA+KL M E +V Y+ LI
Sbjct: 401 EMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 112/293 (38%), Gaps = 41/293 (13%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N L F + ++ K A+++ E+ +P +FTY I+ + D A + M+
Sbjct: 271 FNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMI 330
Query: 64 ---DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
A S P + ++V L K K +E + I G P +
Sbjct: 331 TKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS------------- 377
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ V+ +C + V A + + EM G PP +
Sbjct: 378 -----------------------TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414
Query: 181 NFVITGYCKAGEMEQAVEMM-KLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
N + C+ + ++A+++ +++ESR P V TY ++ S + + + A E
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRMVESR-CAPSVQTYNMLISMFFEMDDPDGAFNTWTEMD 473
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
K+ V Y ++I G + EA LL E+ G+++ +D + L
Sbjct: 474 KRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRL 526
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
K F ++ AL + +L+ MI+ G P + + VI G C A ++++A + +
Sbjct: 342 KTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+ ++G PD+ TY + + A K+ + + Y+ LI + +M+
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDD 461
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSL--CLKA 296
D A TEM + +V+ Y +I L C +A
Sbjct: 462 PDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA 497
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLML--EMIADGPPPGNA-VFNFVITGYCKAGEMEQAVEMMK 201
F +V ALC K V A++L +I +G N + N ++ G+ K G + E K
Sbjct: 154 FYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWK 213
Query: 202 LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKME 261
+++ G+ D+++Y++ G+ A K+ +E K + L V Y+++IR +
Sbjct: 214 KMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQ 273
Query: 262 QFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ +++ EM+E G NV ++ +I+ LC
Sbjct: 274 GVEFGIRVFREMRERGCEPNVATHNTIIKLLC 305
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 8/191 (4%)
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
A+++ KE+ R +L + V+RA+ + V ++ EM G P A N +I
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIK 302
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEA--ARKILEEAKKKHS 243
C+ G M A M+ + RG +PD TY + S E+ + R I + K
Sbjct: 303 LLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMD 362
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAE 303
Y L+R + + + + MKE G + Y+ +I +L K M + A
Sbjct: 363 T-----YVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGM-LDMAR 416
Query: 304 KLHAELKENGL 314
+ E+ E GL
Sbjct: 417 EYEEEMIERGL 427
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 107/258 (41%), Gaps = 42/258 (16%)
Query: 16 KGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVG 75
+G V+EK + F +P F Y ++AL + FD AL V + + + E +
Sbjct: 208 RGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFM 267
Query: 76 DLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPG 135
L+ LCK +++E LE+L+ +
Sbjct: 268 ILVKGLCKAGRIEE------------------------------------MLEILQRM-- 289
Query: 136 DRRELAKKR---FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGE 192
R L K + A+++ L ++ + ++ EM D P + ++ G CK G
Sbjct: 290 -RENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGR 348
Query: 193 MEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHS 252
+E+ E+ ++ + + D Y V+ G+ G++ +A + E+ + IY++
Sbjct: 349 VERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNA 408
Query: 253 LIRGYCKMEQFDEAVKLL 270
+I+G C + Q D+A KL
Sbjct: 409 VIKGLCSVNQVDKAYKLF 426
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%)
Query: 171 DGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEA 230
DG + F ++ G CKAG +E+ +E+++ + +PDV+ Y + + G ++A
Sbjct: 257 DGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDA 316
Query: 231 ARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
+ ++ +E ++ + Y +L+ G CK + + +L EMK + ++ + Y LI+
Sbjct: 317 SLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE 376
Query: 291 SL 292
Sbjct: 377 GF 378
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 109/260 (41%), Gaps = 8/260 (3%)
Query: 35 NSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWL-CKGKKLKEAHAV 93
N+F Y L +R + LP +++D++ P ++L+ + ++ + V
Sbjct: 162 NAFAYCLNRNGHFRAAD---QLP---ELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYV 215
Query: 94 YKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALC 153
Y+ + G P + N ++ L + N LAL V ++ D F +V+ LC
Sbjct: 216 YEKMKKFGFKPRVFLYNRIMDALVK-NGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVY 213
+ + +++ M + P + +I G ++ ++ + + ++PDV
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 214 TYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
Y + G G +E ++ E K K ++ IY LI G+ + A L ++
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDL 394
Query: 274 KEFGVRVNVDEYDKLIQSLC 293
+ G ++ Y+ +I+ LC
Sbjct: 395 VDSGYIADIGIYNAVIKGLC 414
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
A +N +I G CKAG+ ++A + L GL+PDV TY ++ S G A K+ E
Sbjct: 15 AGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLG----RAEKLYAE 70
Query: 238 AKKKHSVLTPVIYHS--------------------------LIRGYCKMEQFDEAVKLLT 271
++ V + Y+S LI GYCK + + + L
Sbjct: 71 MIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFC 130
Query: 272 EMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT 320
EM G+ NV Y LI + D+ TA + E+ NG+Y T
Sbjct: 131 EMYRRGIVANVITYTTLIHGF-RQVGDFNTALDIFQEMVSNGVYSSSIT 178
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 81/194 (41%), Gaps = 18/194 (9%)
Query: 81 LCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRREL 140
LCK K EA ++ + G P + N ++ + S L E++ RR L
Sbjct: 24 LCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RFSSLGRAEKLYAEMI------RRGL 76
Query: 141 AKKR--FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVE 198
+ +++ LC+ + A+++ + FN +I GYCKA ++ +
Sbjct: 77 VPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVKDGMN 127
Query: 199 MMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYC 258
+ + RG+ +V TY + G+ G+ A I +E + + + ++ C
Sbjct: 128 LFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLC 187
Query: 259 KMEQFDEAVKLLTE 272
++ +AV +L +
Sbjct: 188 SRKELRKAVAMLLQ 201
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 34/283 (12%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ ++K + AL +FEK E N+ ++ I + D A+ + +KM
Sbjct: 140 NTMISGYAKNRRIGEALLLFEKMP----ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPV 195
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYK--AAIELGKYPPMPYINFLVAKLSQENET 122
S P + L+ L K ++L EA V ++ G+ + N L+ Q +
Sbjct: 196 KDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQ- 250
Query: 123 VPLALEVLKEIP--------GDRRELAKKR---FPAVVRALCRVKDVGTAKQLMLEMIAD 171
V A + +IP G+ RE K + ++++A +V DV +A+ L +M
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM--- 307
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
+N +I GY ME A + + +R D +++ ++ SGY++ G +E A
Sbjct: 308 -KDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELA 362
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
R E+ +KH+ V ++S+I Y K + + EAV L M
Sbjct: 363 RHYFEKTPEKHT----VSWNSIIAAYEKNKDYKEAVDLFIRMN 401
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 115/286 (40%), Gaps = 4/286 (1%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKF-EVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+N L+ S + GK A +F+K E F PN TY + + R A + M
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+D P+ + +L L + +K +A ++ G P + ++ +++ +
Sbjct: 325 IDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS-S 383
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A+E ++ + + ++ K + T +L+ EM G PP +N
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I E A + + + P ++T+ +I Y E R + EE KK
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
Y LIRG + EA + L EM + G++ + +Y+K
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ ++ CRV+++ A ++ +MI G P N ++ G ++ + A+++ +++
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK 360
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
S+G P+V +Y ++ + ME A + ++ +Y LI G+ ++ D
Sbjct: 361 SKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 420
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKEN 312
+LL EM+E G + Y+ LI+ + + M E A +++ ++ +N
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP-EHATRIYNKMIQN 467
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
++ L R + A +L M + GP P + +I +CK ME A+E + G
Sbjct: 339 MLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
L+PD Y + +G+ +++ ++L+E ++K Y++LI+ + + A
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHAT 458
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
++ +M + + ++ ++ +++S + A ++E + E+ + G+
Sbjct: 459 RIYNKMIQNEIEPSIHTFNMIMKSYFM-ARNYEMGRAVWEEMIKKGI 504
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 139 ELAKK-RFPAVVRAL-CRVKDVGTAK-----QLMLEMIADGPPPGNAVFNFVITGYCKAG 191
EL KK +F V + C + +G AK Q++ + + + P + ++ G+C+
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 312
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
+ +A + + +GL+PD+ + V+ G + A K+ K K Y
Sbjct: 313 NLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
+IR +CK + A++ +M + G++ + Y LI + +T +L E++E
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK-KLDTVYELLKEMQE 431
Query: 312 NGLYLKGAT-RALIR 325
G G T ALI+
Sbjct: 432 KGHPPDGKTYNALIK 446
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
P + ++++I G C G A E++ ++ +G P+ +Y + + ++ GE++ A K
Sbjct: 322 PNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKC 381
Query: 235 LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
L E + V+ + Y +L+ C+ ++DEA +LL ++E + V+ D YDKL+ L
Sbjct: 382 LWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL-VDRDSYDKLVNVL 438
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Query: 160 TAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLES-RGLRPDVYTYAVI 218
T + L +M+ G P N ++ GY + + A+ + + P+ +TY +
Sbjct: 271 TVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYL 330
Query: 219 ASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
G G AR++L E K K V Y+SL+ + + D+AVK L EM E G
Sbjct: 331 IHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGR 390
Query: 279 RVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGATRALIRAVKE 329
V+ Y L+ C K ++ A +L L+E L + + L+ + +
Sbjct: 391 VVDFISYRTLVDESCRKG-KYDEATRLLEMLREKQLVDRDSYDKLVNVLHK 440
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 84/160 (52%), Gaps = 20/160 (12%)
Query: 141 AKKRFPA---VVRALCRVKDVGTAKQLMLEMIADGPPPGNAV-FNFVITGYCKAGEMEQA 196
++ R P ++ LC+V + A++L DG P + V + VITGY K G+M +A
Sbjct: 42 SRPRVPQPEWLIGELCKVGKIAEARKLF-----DGLPERDVVTWTHVITGYIKLGDMREA 96
Query: 197 VEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRG 256
E+ ++S R +V T+ + SGY ++ A + +E +++ V ++++I G
Sbjct: 97 RELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN----VVSWNTMIDG 149
Query: 257 YCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
Y + + D+A++L EM E N+ ++ ++++L +
Sbjct: 150 YAQSGRIDKALELFDEMPE----RNIVSWNSMVKALVQRG 185
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 136/322 (42%), Gaps = 61/322 (18%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ +++ G+ ALE+F++ E N ++ ++AL +R D A+ + ++M
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLFERM-P 198
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
R + W ++ D L K K+ EA ++ E + N ++ +Q N +
Sbjct: 199 RRDVVSWTAMVD---GLAKNGKVDEARRLFDCMPERN----IISWNAMITGYAQNNR-ID 250
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV-FNFV 183
A ++ + +P R+ A + ++ R +++ A L M P N + + +
Sbjct: 251 EADQLFQVMP--ERDFAS--WNTMITGFIRNREMNKACGLFDRM-----PEKNVISWTTM 301
Query: 184 ITGYCKAGEMEQAVEMM-KLLESRGLRPDVYTYAVIASG--------------------- 221
ITGY + E E+A+ + K+L ++P+V TY I S
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 222 --------------YSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
YS GE+ AARK+ + L + ++S+I Y EA+
Sbjct: 362 HQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDL--ISWNSMIAVYAHHGHGKEAI 419
Query: 268 KLLTEMKEFGVRVNVDEYDKLI 289
++ +M++ G + + Y L+
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLL 441
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 125/279 (44%), Gaps = 10/279 (3%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFE--KFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+ + LV + ++ G + A EV E + E F ++ ++ L + D V +
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMG--CLLNVNEIDRFWKVYK 207
Query: 61 KMLDARSIPEWYSVGDLLVW-LCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQE 119
+M D+ E + +L+++ CK KL EA +V+ ++ G +P + N ++ +
Sbjct: 208 EM-DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKT 266
Query: 120 NETVPLALEVLKEI---PGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
+ + AL++L ++ G+ + +V+ C+ + A+++ +M+ G
Sbjct: 267 GD-MRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+ ++ Y +AG ++A+ + + S+GL + Y I G++E A +L
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLR 385
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKE 275
+ K+ + ++RG C+ EAV+ ++ E
Sbjct: 386 DMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISE 424
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 104/235 (44%), Gaps = 4/235 (1%)
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAK 142
+G+KL H + P + + + +N A EV+++ + ++
Sbjct: 124 EGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSV 183
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
+ L V ++ ++ EM + G FN VI +CK ++ +A+ +
Sbjct: 184 HALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYR 243
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE-AKKKHSVLTP--VIYHSLIRGYCK 259
+ G+ P+V ++ ++ G G+M A ++L + + ++P V Y+S+I G+CK
Sbjct: 244 MLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCK 303
Query: 260 MEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+ D A ++ +M + GV N Y L+ + +A + A +L E+ GL
Sbjct: 304 AGRLDLAERIRGDMVKSGVDCNERTYGALVDAYG-RAGSSDEALRLCDEMTSKGL 357
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 122/299 (40%), Gaps = 8/299 (2%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCE--PNSFTYYLTIEALYRRSAFDWALPVCQK 61
N +++SF K K AL VF + + +C PN ++ + I+ + +AL + K
Sbjct: 221 FNLVIYSFCKESKLFEALSVF--YRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGK 278
Query: 62 M--LDARSI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQ 118
M + + P + ++ CK +L A + ++ G LV +
Sbjct: 279 MGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGR 338
Query: 119 ENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNA 178
+ AL + E+ + + ++V L D+ A ++ +M +
Sbjct: 339 AGSSDE-ALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRF 397
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
V+ G C+ G +++AVE + + + L D+ + + + ++ A +IL
Sbjct: 398 TQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSM 457
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
+ L + + +LI GY K + + A+++ M + N+ Y+ ++ L + M
Sbjct: 458 LVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGM 516
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ ++ + L V V A++++ EM+ G PG + +I Y + G + AV++ + +E
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME 612
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAA---RKILEE--AKKKHSVLTPVIYHSLIRGYCK 259
G++P+ Y + +G++ G +E A +++EE + H VLT SLI+ Y K
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLT-----SLIKAYSK 667
Query: 260 MEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
+ +EA ++ +MK+ +V + ++ SLC AE + L+E G
Sbjct: 668 VGCLEEARRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESIFNALREKG 720
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 67/145 (46%)
Query: 137 RRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQA 196
R+ F ++ + + A L EM+ G P FN +I G + +A
Sbjct: 300 RKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEA 359
Query: 197 VEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRG 256
++K +E +G+ PD TY ++ S +++ G++EAA + + +K V + +++
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 257 YCKMEQFDEAVKLLTEMKEFGVRVN 281
C+ + E ++ EM +R++
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRID 444
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 35/272 (12%)
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAK 142
K K ++A +++K G +P N L L+ + V A +L E+ +
Sbjct: 527 KAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGV-DLVDEAQRILAEMLDSGCKPGC 585
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
K + A++ + R+ + A L M G P V+ +I G+ ++G +E+A++ ++
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRM 645
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK---------KHSVLT------- 246
+E G++ + + YS G +E AR++ ++ K +S+L+
Sbjct: 646 MEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGI 705
Query: 247 ----PVIYHSLI-RGYCKMEQF-------------DEAVKLLTEMKEFGVRVNVDEYDKL 288
I+++L +G C + F DEA+++ EM+E G+ + ++++
Sbjct: 706 VSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQV 765
Query: 289 IQSLCLKAMDWETAEKLHAELKENGLYLKGAT 320
+ E E H L E L L T
Sbjct: 766 MACYAADGQLSECCELFHEMLVERKLLLDWGT 797
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 119/278 (42%), Gaps = 2/278 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y+ D++ + K ++ + N Y I R D +
Sbjct: 629 VYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFE 688
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M+ P + LL K K K+ + ++ A G + Y N ++A +
Sbjct: 689 EMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISY-NTIIAAYGKNK 747
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+ ++ +K + D ++ + + ++ A + K + + ++ M P + +
Sbjct: 748 DYTNMS-SAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N +I Y + G +++ +++K L+ GL PD+ +Y + Y GG +E A +++E +
Sbjct: 807 NIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRG 866
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
++ + V Y +L+ + ++F EA+K MK+ G+
Sbjct: 867 RNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 113/263 (42%), Gaps = 13/263 (4%)
Query: 27 FEVFQCEP----NSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLC 82
F+ +C N Y L + L RR +D A + +++ + Y V + +++ C
Sbjct: 161 FDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYAC 220
Query: 83 KGK-KLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN---ETVPLALEVLKEIPGDRR 138
K +K A + +E G P + I L+ L Q+N E A +++
Sbjct: 221 TKKGNVKLASKWFHMMLEFGVRPNVATIGMLMG-LYQKNWNVEEAEFAFSHMRKFG---- 275
Query: 139 ELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVE 198
+ + + +++ R++ A++++ M D + ++ Y + G+ME A
Sbjct: 276 IVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAES 335
Query: 199 MMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYC 258
++ +E+ G P++ Y + +GY +MEAA+ + Y S+I G+
Sbjct: 336 ILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWG 395
Query: 259 KMEQFDEAVKLLTEMKEFGVRVN 281
+ + ++EA E+K G + N
Sbjct: 396 RADNYEEAKHYYQELKRCGYKPN 418
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ ++ A + KD + M DG +N ++ Y K +ME+ ++K ++
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI--YHSLIRGYCKMEQ 262
PD YTY ++ + Y G ++ +L+E K+ S L P + Y++LI+ Y
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKE--SGLGPDLCSYNTLIKAYGIGGM 853
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSL-----CLKAMDW 299
+EAV L+ EM+ + + Y L+ +L L+A+ W
Sbjct: 854 VEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKW 895
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 83 KGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS-QENETVPLALEVLKEIPGDRRELA 141
K + + E +Y+ ++ P + + L+ LS N + L V ++ + L+
Sbjct: 310 KSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLS 369
Query: 142 KKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMK 201
K + + R+L V A+++ M G P N ++ ++ G CKA +E+A ++
Sbjct: 370 KAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLD 429
Query: 202 LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKME 261
+E++G PD+ T+ ++ G+ E++ A +K + + LI G+
Sbjct: 430 QMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHN 489
Query: 262 QFDEAVKLLTEM-KEFGVRVNVDEYDKLIQSL 292
+F+ A L EM K V+ Y LI L
Sbjct: 490 KFEGASIFLMEMVKNANVKPWQSTYKLLIDKL 521
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 20/274 (7%)
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+D+ +P LL + +KLK+A +++ + P + L+ +
Sbjct: 242 MDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRR- 300
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
V +A+EVL+E+ E+ F ++ L + A +M P +N
Sbjct: 301 VQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNS 360
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI---LEEAK 239
++ +CKAG++ A +++K++ +RG+ P TY +S + E + L EA
Sbjct: 361 LVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
LT YH +++ C+ + A+++ EMK G+ ++ LI LC M
Sbjct: 421 HSPDRLT---YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLE 477
Query: 300 ETAEKLHAELK-------------ENGLYLKGAT 320
E E+ ++ +NGL KG +
Sbjct: 478 EAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMS 511
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 90/228 (39%), Gaps = 1/228 (0%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L+ + ++ + + A+EV E+ ++ + E N + I+ L AL + ++
Sbjct: 291 LIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCE 350
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
S P + L+ CK L A + K + G P N S+ N+T
Sbjct: 351 SGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGM 410
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITG 186
K I + + +++ LC + A Q+ EM G P +I
Sbjct: 411 NLYFKLIEAGHSP-DRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHL 469
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
C+ +E+A E RG+ P T+ +I +G + G + A+++
Sbjct: 470 LCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 110/262 (41%), Gaps = 8/262 (3%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIE-------ALYRRSAFD 53
+ + N L++ K K AALE++E EPN+ +Y L + A +R +
Sbjct: 381 LSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWR 440
Query: 54 WALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLV 113
W + + KM D P+ +LV K + A ++KA ++ G+ P + L+
Sbjct: 441 WGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALL 500
Query: 114 AKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGP 173
+ L ++ + A V + E + + L + L+ EM + G
Sbjct: 501 SAL-EKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
Query: 174 PPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARK 233
P FN VI+G + G A E ++S + P+ TY ++ +N + A +
Sbjct: 560 EPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYE 619
Query: 234 ILEEAKKKHSVLTPVIYHSLIR 255
+ +A+ + L+ Y ++++
Sbjct: 620 LHVKAQNEGLKLSSKPYDAVVK 641
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
Query: 142 KKRFPAVVRALC--------RVKDVGTAKQLMLEMIADGPPPGN-------AVFNFVITG 186
++RF + ++C + K A ++ +++ +GP P N + FN +++
Sbjct: 373 RERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSA 432
Query: 187 YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLT 246
K G V ++ +E +GL+P + + S E AA +I + T
Sbjct: 433 ASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPT 492
Query: 247 PVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+ Y +L+ K + +DEA ++ M + G+ N+ Y + L
Sbjct: 493 VISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVL 538
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEM-IADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLL 203
VV LC ++ A++L+ EM + G F +I K + E+ ++KL+
Sbjct: 213 LTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLM 272
Query: 204 ESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQF 263
E + D+ +Y V+ G+++ G++E A +++ K + +Y+ ++ GY +
Sbjct: 273 EKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLV 332
Query: 264 DEAVKLLTEMKEFGVRVNVDEYDKLIQSLC--------------LKAMDWETAEKLHAEL 309
++ ++L +EM GV N D Y L+ LC L+ ++E E++++ L
Sbjct: 333 EKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTL 392
Query: 310 KENGLYLKGATRALIRAVKEM 330
E Y G + V EM
Sbjct: 393 SEE-CYRVGMIDKSLEVVAEM 412
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 119/276 (43%), Gaps = 3/276 (1%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
N ++ +S GK +EVFE + + + + T L + L R + A M+
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 64 DAR-SIPEWYSVGDLL-VWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENE 121
++ + YS+ ++ V C G+ + V + + G + ++ + +
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN 181
L L VLK + + L + ++ V A++L+L M + ++N
Sbjct: 262 FEELDL-VLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYN 320
Query: 182 FVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
++ GY + G +E+ +E+ + SRG+ P+ TY V+ +G G++ A L E +
Sbjct: 321 LIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVN 380
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
+ +Y +L ++ D++++++ EM G
Sbjct: 381 EFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDG 416
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 152 LCRVKD----VGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
LCR KD ++++LEM G P FN +I CK E+A+ + + G
Sbjct: 293 LCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWG 352
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK--HSVLTPVIYHSLIRGYCKMEQFDE 265
+PD TY V+ + +++++ K +L Y+ ++ C +E+ +
Sbjct: 353 CQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEH 412
Query: 266 AVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGATRALIR 325
A+ + MK G + + YD L+ +C + + NGLY + A + +
Sbjct: 413 AMSVFKSMKANGCKPGIKTYDLLMGKMCAN----------NQLTRANGLYKEAAKKGIAV 462
Query: 326 AVKE 329
+ KE
Sbjct: 463 SPKE 466
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ ++ CRV+++ A ++ +MI G P N ++ G ++ + A+++ +++
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 360
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
S+G P+V +Y ++ + ME A + ++ +Y LI G+ ++ D
Sbjct: 361 SKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 420
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKEN 312
+LL EM+E G + Y+ LI+ + + M E +++ ++ +N
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP-EHGTRIYNKMIQN 467
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 113/286 (39%), Gaps = 4/286 (1%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKF-EVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+N L+ S + GK A +F+K E F PN TY + + R A + M
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+D P+ + +L L + K +A ++ G P + ++ +++ +
Sbjct: 325 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS-S 383
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A+E ++ + + ++ K + T +L+ EM G PP +N
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I E + + + P ++T+ +I Y E R + +E KK
Sbjct: 444 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
Y LIRG + EA + L EM + G++ + +Y+K
Sbjct: 504 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
++ L R A +L M + GP P + +I +CK ME A+E + G
Sbjct: 339 MLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
L+PD Y + +G+ +++ ++L+E ++K Y++LI+ + +
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 458
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
++ +M + + ++ ++ +++S + A ++E + E+ + G+
Sbjct: 459 RIYNKMIQNEIEPSIHTFNMIMKSYFV-ARNYEMGRAVWDEMIKKGI 504
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 9/195 (4%)
Query: 139 ELAKK-RFPAVVRAL-CRVKDVGTAK-----QLMLEMIADGPPPGNAVFNFVITGYCKAG 191
EL KK +F V + C + +G AK Q++ + + + P + ++ G+C+
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 312
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
+ +A + + GL+PD+ + V+ G + A K+ K K Y
Sbjct: 313 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
+IR +CK + A++ +M + G++ + Y LI + +T +L E++E
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK-KLDTVYELLKEMQE 431
Query: 312 NGLYLKGAT-RALIR 325
G G T ALI+
Sbjct: 432 KGHPPDGKTYNALIK 446
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ ++ CRV+++ A ++ +MI G P N ++ G ++ + A+++ +++
Sbjct: 300 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 359
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
S+G P+V +Y ++ + ME A + ++ +Y LI G+ ++ D
Sbjct: 360 SKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 419
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKEN 312
+LL EM+E G + Y+ LI+ + + M E +++ ++ +N
Sbjct: 420 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP-EHGTRIYNKMIQN 466
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 113/286 (39%), Gaps = 4/286 (1%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKF-EVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+N L+ S + GK A +F+K E F PN TY + + R A + M
Sbjct: 266 INCLLDSLGRAKLGKEAQVLFDKLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDM 323
Query: 63 LDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENET 122
+D P+ + +L L + K +A ++ G P + ++ +++ +
Sbjct: 324 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS-S 382
Query: 123 VPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNF 182
+ A+E ++ + + ++ K + T +L+ EM G PP +N
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
+I E + + + P ++T+ +I Y E R + +E KK
Sbjct: 443 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL 288
Y LIRG + EA + L EM + G++ + +Y+K
Sbjct: 503 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 548
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
++ L R A +L M + GP P + +I +CK ME A+E + G
Sbjct: 338 MLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 397
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
L+PD Y + +G+ +++ ++L+E ++K Y++LI+ + +
Sbjct: 398 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 457
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
++ +M + + ++ ++ +++S + A ++E + E+ + G+
Sbjct: 458 RIYNKMIQNEIEPSIHTFNMIMKSYFV-ARNYEMGRAVWDEMIKKGI 503
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 9/195 (4%)
Query: 139 ELAKK-RFPAVVRAL-CRVKDVGTAK-----QLMLEMIADGPPPGNAVFNFVITGYCKAG 191
EL KK +F V + C + +G AK Q++ + + + P + ++ G+C+
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 311
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
+ +A + + GL+PD+ + V+ G + A K+ K K Y
Sbjct: 312 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 371
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
+IR +CK + A++ +M + G++ + Y LI + +T +L E++E
Sbjct: 372 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK-KLDTVYELLKEMQE 430
Query: 312 NGLYLKGAT-RALIR 325
G G T ALI+
Sbjct: 431 KGHPPDGKTYNALIK 445
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ +++ LC+ K AK L+ +++ P + ++ +I G+C +++A+ + +++
Sbjct: 255 YNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMV 314
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G +PD Y + GG+ E A + E+ +K+ V + + L+ G + D
Sbjct: 315 CNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVD 374
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKL 288
EA +L+ +KE R NVD ++++
Sbjct: 375 EAKELIAVVKEKFTR-NVDLWNEV 397
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 148 VVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRG 207
++R LC ++ ++ EM P A F +I G+ K + ++ ++M++++ G
Sbjct: 188 MIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFG 247
Query: 208 LRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAV 267
+ V TY ++ + A+ +++ V Y LI G+C E DEA+
Sbjct: 248 VHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAM 307
Query: 268 KLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
L M G + + + Y LI LC K D+ETA
Sbjct: 308 NLFEVMVCNGYKPDSECYFTLIHCLC-KGGDFETA 341
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ G CK G +++A+++ L+ +G P+V Y + + ++E A++I + +
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
Y L++G D+AV +EM E G NV + +L+ +LC + E A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALC-RVKGVEQA 255
Query: 303 EKLHAELKENGLYLKGATRALIRAVKE 329
+ L + G + ++AVKE
Sbjct: 256 QSAIDTLNQKGFAVN------VKAVKE 276
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
A++ LC+ V A +L M G P ++ V+ +CKA ++E A + + +++
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEA-KKKHSVLTPVIYHSLIRGYCKMEQFDE 265
G+ P+ ++Y V+ G N ++ A E + HS P + L+ C+++ ++
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPT-FVELVDALCRVKGVEQ 254
Query: 266 AVKLLTEMKEFGVRVNV 282
A + + + G VNV
Sbjct: 255 AQSAIDTLNQKGFAVNV 271
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
++ G CK G +++A+++ L+ +G P+V Y + + ++E A++I + +
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETA 302
Y L++G D+AV +EM E G NV + +L+ +LC + E A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALC-RVKGVEQA 255
Query: 303 EKLHAELKENGLYLKGATRALIRAVKE 329
+ L + G + ++AVKE
Sbjct: 256 QSAIDTLNQKGFAVN------VKAVKE 276
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
A++ LC+ V A +L M G P ++ V+ +CKA ++E A + + +++
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEA-KKKHSVLTPVIYHSLIRGYCKMEQFDE 265
G+ P+ ++Y V+ G N ++ A E + HS P + L+ C+++ ++
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPT-FVELVDALCRVKGVEQ 254
Query: 266 AVKLLTEMKEFGVRVNV 282
A + + + G VNV
Sbjct: 255 AQSAIDTLNQKGFAVNV 271
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 111/264 (42%), Gaps = 19/264 (7%)
Query: 20 ALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLV 79
A+ +F + + P+ Y I + F A + ++M +A +P S LL
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 80 WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRE 139
+ K EA +V+ E+ + N ++ Q L+++KE DR
Sbjct: 304 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQ--------LDMVKE--ADRLF 353
Query: 140 LAKKR---------FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA 190
+ ++ + ++R + G A L M +N +I Y K
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 191 GEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIY 250
E E+A +++ ++SRG+ P+ TY+ I S + G+++ A + ++ + + V+Y
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 251 HSLIRGYCKMEQFDEAVKLLTEMK 274
++I Y ++ A +LL E+K
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELK 497
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIA--DGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
F A++ A K+ QL E+ + P + +I YC +G E+A+E+M+
Sbjct: 140 FNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQ 199
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
++ +G+ + I S GE+E A + E KK L Y+ +R ++
Sbjct: 200 MQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYN--VRIMSAQKE 257
Query: 263 FDEAVK-LLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYLKGAT- 320
E VK L+ EM G++ + Y+ L+ + C + M + A+K++ L+ N AT
Sbjct: 258 SPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGM-LDEAKKVYEGLEGNNCAPNAATF 316
Query: 321 RALI 324
R LI
Sbjct: 317 RTLI 320
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
A+E+++++ G E+ F ++ +L + ++ A L EM+ G NA +N I
Sbjct: 193 AIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIM 252
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
K E+ E+++ + S GL+PD +Y + + Y G ++ A+K+ E + +
Sbjct: 253 SAQKESP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAP 311
Query: 246 TPVIYHSLIRGYC 258
+ +LI C
Sbjct: 312 NAATFRTLIFHLC 324
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLM-LEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLL 203
+ A V+ALCR + A ++ EM+ P V+N +I G C G+ +AV +K +
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 204 ESR-GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+ + TY + G G+ A +++EE K YH +I+G C M++
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
EAV L EM + + L +S+C A+D
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESVCFCAID 491
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 131/302 (43%), Gaps = 15/302 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ ++ +FS+ G+ + A+ +F+ F C S ++ ++ + + S + A + +K
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 63 LDARSIPEWYSVGDLLV-WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN- 120
+ + +LL+ LC+ + A V++ G YP L+ E
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 121 --ETVPLALEVLKEIP--GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
E L + I G ++ R ++ ALC +V A +++ +++ G
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRI--LLDALCDAGEVDDAIEILGKILRKGLKAP 260
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLES----RGLRPDVYTYAVIASGYSNGGEMEAAR 232
++ + G+ ++ + +E +K L + RG P + +Y+ +A+ G++
Sbjct: 261 KRCYHHIEAGHWESS--SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGE 318
Query: 233 KILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT-EMKEFGVRVNVDEYDKLIQS 291
++L + K TP IY + ++ C+ + EAV ++ EM + V Y+ LI+
Sbjct: 319 EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG 378
Query: 292 LC 293
LC
Sbjct: 379 LC 380
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLM-LEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLL 203
+ A V+ALCR + A ++ EM+ P V+N +I G C G+ +AV +K +
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 204 ESR-GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+ + TY + G G+ A +++EE K YH +I+G C M++
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
EAV L EM + + L +S+C A+D
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESVCFCAID 491
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 131/302 (43%), Gaps = 15/302 (4%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ ++ +FS+ G+ + A+ +F+ F C S ++ ++ + + S + A + +K
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 63 LDARSIPEWYSVGDLLV-WLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN- 120
+ + +LL+ LC+ + A V++ G YP L+ E
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 121 --ETVPLALEVLKEIP--GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
E L + I G ++ R ++ ALC +V A +++ +++ G
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRI--LLDALCDAGEVDDAIEILGKILRKGLKAP 260
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLES----RGLRPDVYTYAVIASGYSNGGEMEAAR 232
++ + G+ ++ + +E +K L + RG P + +Y+ +A+ G++
Sbjct: 261 KRCYHHIEAGHWESS--SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGE 318
Query: 233 KILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLT-EMKEFGVRVNVDEYDKLIQS 291
++L + K TP IY + ++ C+ + EAV ++ EM + V Y+ LI+
Sbjct: 319 EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG 378
Query: 292 LC 293
LC
Sbjct: 379 LC 380
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 161 AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIAS 220
AK++ EM G P +N +I G C AGE +A ++K +ESRG P+ Y+ +
Sbjct: 743 AKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVG 802
Query: 221 GYSNGGEMEAARKILEEAKKK 241
G++ ARK+++E KK
Sbjct: 803 YLRKAGKLSEARKVIKEMVKK 823
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 196 AVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIR 255
A+ + ++ G+ P V Y + GY GE++ A+++ E K + Y+S+IR
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLY 315
G C +F EA LL EM+ G N Y L+ L KA A K+ E+ + G Y
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYL-RKAGKLSEARKVIKEMVKKGHY 826
Query: 316 LKGATRAL 323
+ ++ +
Sbjct: 827 VHLVSKMM 834
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%)
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P + +I GY +GE+++A EM + + +G P+V+TY + G GE A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNV 282
+L+E + + V+Y +L+ K + EA K++ EM + G V++
Sbjct: 779 CWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHL 829
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ A+V + + V A++L +M P +N ++ GY + ME A E+ ++
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
R +V T+ + +GY+ G++ A+ + ++ K+ PV + ++I GY +
Sbjct: 340 CR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSF 391
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
EA++L +M+ G R+N + + S C + E ++LH L + G
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSAL-STCADVVALELGKQLHGRLVKGG 439
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Query: 143 KRFPAVVRALC---RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEM 199
R+ A +R LC R + A+ + +I G P + N +I YCK+ E+ A ++
Sbjct: 13 NRYAANLR-LCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL 71
Query: 200 MKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCK 259
+ PD + SGY G++ AR + E+A + V+Y+++I G+
Sbjct: 72 FDEIS----EPDKIARTTMVSGYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSH 125
Query: 260 MEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLH-AELKENGLYLKG 318
A+ L +MK G + + + ++ L L A D + + H A LK Y+
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS 185
Query: 319 ATRALI 324
+ AL+
Sbjct: 186 VSNALV 191
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 121/278 (43%), Gaps = 22/278 (7%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
L++ +S G + A ++F++ CE ++ + A D A+ +++ +
Sbjct: 130 LLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 67 SI-PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPL 125
I P+ + ++ LC+ + + ++++ + G P + N L+ + +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRR------ 241
Query: 126 ALEVLKEIPGDR-------RELAK--KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
E+ E GDR + L+ + + + VR L R K A L+ M +G P
Sbjct: 242 --ELFVE--GDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD 297
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+N +IT Y +E+ ++ ++ +GL PD TY ++ G+++ A ++ E
Sbjct: 298 VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSE 357
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
EA K + P +Y ++ + DEA +L+ K
Sbjct: 358 EAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 123/296 (41%), Gaps = 18/296 (6%)
Query: 12 SKLGKGKAALEVFEKFEVFQCEPNSFTYYLTI-EALYRR-------SAFDWALPVCQKML 63
+K K + EKF+ CE SF + A RR S D L +K
Sbjct: 59 AKDSKNSKLTQKVEKFKR-SCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFD 117
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETV 123
D +S E + + +L++ G + AH ++ EL + N L++ ++ +
Sbjct: 118 DIKS--EDFVIRIMLLYGYSGM-AEHAHKLFDEMPELNCERTVKSFNALLSAYVN-SKKL 173
Query: 124 PLALEVLKEIP---GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
A++ KE+P G +L + +++ALCR + + E+ +G P F
Sbjct: 174 DEAMKTFKELPEKLGITPDLVT--YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISF 231
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKK 240
N ++ + + + + L++S+ L P++ +Y G + + A +++ K
Sbjct: 232 NTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKT 291
Query: 241 KHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+ Y++LI Y +E +K EMKE G+ + Y LI LC K
Sbjct: 292 EGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKG 347
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
VV + +G A+ EM P + +I+GY + GE++ A KL +
Sbjct: 118 GVVDMYAKFGKMGCARNAFDEM----PHRSEVSWTALISGYIRCGELDLAS---KLFDQM 170
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
DV Y + G+ G+M +AR++ +E K T + + ++I GYC ++ D A
Sbjct: 171 PHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAA 226
Query: 267 VKLLTEMKEFGVRVNVDEYDKLIQSLC 293
KL M E N+ ++ +I C
Sbjct: 227 RKLFDAMPE----RNLVSWNTMIGGYC 249
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKA-GEMEQAVEMMKLL 203
F ++ ALCR + A++ ML P FN ++ G+C ++ +A + + +
Sbjct: 227 FQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEG-FNVILNGWCNIWTDVTEAKRIWREM 285
Query: 204 ESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQF 263
+ + P+ +Y+ + S +S G + + ++ +E KK+ +Y+SL+ + + F
Sbjct: 286 GNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCF 345
Query: 264 DEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
DEA+KL+ ++ E G++ + Y+ +I+ LC
Sbjct: 346 DEAMKLMKKLNEEGLKPDSVTYNSMIRPLC 375
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 95/213 (44%), Gaps = 5/213 (2%)
Query: 69 PEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALE 128
P S ++ K L ++ +Y + G P + N LV L++E + A++
Sbjct: 292 PNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTRE-DCFDEAMK 350
Query: 129 VLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYC 188
++K++ + + + +++R LC + A+ ++ MI++ P F+ +
Sbjct: 351 LMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFH----AFL 406
Query: 189 KAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPV 248
+A E+ +E++ ++ L P T+ +I G + E A KI E + V P
Sbjct: 407 EAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPA 466
Query: 249 IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
+Y + I+G ++A ++ +EMK G N
Sbjct: 467 LYLATIQGLLSCGWLEKAREIYSEMKSKGFVGN 499
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 14/250 (5%)
Query: 4 LNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKML 63
+N ++ + LG A ++ +C P+ +Y I AL ++ A+ + + M
Sbjct: 250 MNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMW 309
Query: 64 DARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS--QENE 121
D R P+ +++ LC K++ EA V++ E G P + N L+ L + E
Sbjct: 310 DTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTE 369
Query: 122 TVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLM----LEMIADGPPPGN 177
V +E + E+ G F +++ R KDV + M EM +D
Sbjct: 370 KVWELVEEM-ELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSD------ 422
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
++N + Y + + E+ E+ +E GL PD TY + G G++ A +E
Sbjct: 423 -LYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQE 481
Query: 238 AKKKHSVLTP 247
K V P
Sbjct: 482 MMSKGMVPEP 491
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 11/289 (3%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDAR 66
LV F + G+ + AL+V+++ + Y I A + +D AL + Q ML
Sbjct: 255 LVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKG 314
Query: 67 SIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLA 126
P + L+ L K K+ VY LG P N L+ L + N +
Sbjct: 315 MKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDV- 373
Query: 127 LEVLKEIPGDRRELAKKRFPAVVRALCRVKDVG---TAKQLMLEMIADGPPPGNAVFNFV 183
L++ I + + C + +G A +L+ EM G + +N V
Sbjct: 374 LQLFDMIRSENLCCLNEYLYNTAMVSC--QKLGYWEKAVKLLYEMEGSGLTVSTSSYNLV 431
Query: 184 ITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHS 243
I+ K+ + + A+ + + + R +P+ +TY + G + IL++ + S
Sbjct: 432 ISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVS 491
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
+Y++ I G C +F A +L +M+E G+ + ++Q+L
Sbjct: 492 -----LYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
LAL+V E+ ++ L + A++ A + + A ++ M+ G P N +I
Sbjct: 267 LALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLI 326
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH-S 243
KAG++ ++ +L+S G +PD YT+ + + E ++ + + ++
Sbjct: 327 NSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLC 386
Query: 244 VLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
L +Y++ + K+ +++AVKLL EM+ G+ V+ Y+ L+ S C K+
Sbjct: 387 CLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYN-LVISACEKS 438
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
++N +I GYC+A +M A + + + R + +++ + GY + GE+ A+++ E
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELM 253
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYD-KLIQSLCLKAM 297
+K+ V + +LI G+ + ++ A+ EM E G++ N EY + S C K+
Sbjct: 254 PEKN----VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPN--EYTIAAVLSACSKSG 307
Query: 298 DWETAEKLHAELKENGLYLKGATRALIRAVKEM 330
+ ++H + +NG+ L RA+ A+ +M
Sbjct: 308 ALGSGIRIHGYILDNGIKLD---RAIGTALVDM 337
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
+ + +++A C D+ A QL +M+ P + +I G+C+ G++ A+E++
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
+ ++G PD + G + G + +K LEE K + + L++G+C +
Sbjct: 251 MLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 306
Query: 263 FDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+EA ++ + + G ++ D ++ +I +C
Sbjct: 307 VEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 172 GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAA 231
G P +N ++ +C ++ A ++ + R + PDV +Y ++ G+ G++ A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 232 RKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
++L++ K V +LI G C FDE K L EM G + + L++
Sbjct: 245 MELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 292 LC 293
C
Sbjct: 301 FC 302
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 163 QLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGY 222
+L+ E + P G V V+ G CK + E+A E+ + + + G + Y + S Y
Sbjct: 138 ELLREQLWYKPNVGIYVKLIVMLGKCK--QPEKAHELFQEMINEGCVVNHEVYTALVSAY 195
Query: 223 SNGGEMEAARKILEEAKKKHSVLTPV-IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
S G +AA +LE K H+ V Y LI+ + ++ FD+ LL++M+ G+R N
Sbjct: 196 SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPN 255
Query: 282 VDEYDKLIQS 291
Y+ LI +
Sbjct: 256 TITYNTLIDA 265
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 152 LCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMM-KLLESRGLRP 210
L + K A +L EMI +G + V+ +++ Y ++G + A ++ ++ S +P
Sbjct: 160 LGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQP 219
Query: 211 DVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLL 270
DV+TY+++ + + + +L + +++ + Y++LI Y K + F E L
Sbjct: 220 DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTL 279
Query: 271 TEM 273
+M
Sbjct: 280 IQM 282
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N +I +AG+++ A E+ + + + G+ + TY + S Y G +++ A +I A+
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+ L IY ++I Y K + EA+ L +EM++ G++ Y+ +++ +
Sbjct: 837 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHH 896
Query: 300 ETAEKLHAELKENG 313
E E L A ++ NG
Sbjct: 897 EVDELLQA-MERNG 909
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 159 GTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVI 218
G L LEM+ +G PP + V++ Y K G E+A++ ++S G P+ TY+ +
Sbjct: 275 GKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSV 334
Query: 219 ASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGV 278
S G+ E A + E+ + + V + +++ Y K E + +A+ L +M+
Sbjct: 335 ISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMER--- 391
Query: 279 RVNVDEYDKLIQSLCLK 295
N D++I+ L ++
Sbjct: 392 --NKIPADEVIRGLIIR 406
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 37/273 (13%)
Query: 87 LKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFP 146
L++A+ ++ + E G P I+ LV L+ + A + + EL +
Sbjct: 720 LEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHRE-AEHISRTCLEKNIELDTVGYN 778
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESR 206
+++A+ + A ++ M G P +N +I+ Y + ++++A+E+
Sbjct: 779 TLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRS 838
Query: 207 GLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK--------HSVLTPV---------- 248
GL D Y + Y GG+M A + E +KK ++++ +
Sbjct: 839 GLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEV 898
Query: 249 -----------------IYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQS 291
Y +LI+ Y + QF EA K +T +KE G+ ++ + L+ +
Sbjct: 899 DELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSA 958
Query: 292 LCLKAMDWETAEKLHAELKENGLYLKGATRALI 324
L +KA E AE+ + ++ E G+ A + I
Sbjct: 959 L-VKAGMMEEAERTYCKMSEAGISPDSACKRTI 990
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
+ F +++R R+KD A ++ + P +++FN ++ GY + + A+ ++K
Sbjct: 444 ENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKNVSSALMVVKQ 503
Query: 203 LESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQ 262
++ G++PD T+ + +N + +A K EE K+ T IY SLI Y +
Sbjct: 504 MKEAGVKPDSITFGYL---INNCTQEDAITKYYEEMKQAGVQATKRIYMSLIDAYAASGK 560
Query: 263 FDEAVKLLTE 272
F++A ++L +
Sbjct: 561 FEKAKQVLVD 570
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 40/187 (21%)
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAV-FNFVITGYCKAGEMEQAVEMMKLLESRGL---- 208
+ KD+ +A+++ EM P NAV + ++ Y K+GE+E+A M L+ R L
Sbjct: 157 KCKDLFSARKVFGEM-----PERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWN 211
Query: 209 -----------------------RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
+ D+ +Y + GY+ GG+M +AR + EEA+ +
Sbjct: 212 ALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARG----V 267
Query: 246 TPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKL-IQSLCLKAMDWETAEK 304
+ +LI GY + Q +EA K+ +EM V DE+ + + S C + +E EK
Sbjct: 268 DVRAWSALILGYAQNGQPNEAFKVFSEM--CAKNVKPDEFIMVGLMSACSQMGCFELCEK 325
Query: 305 LHAELKE 311
+ + L +
Sbjct: 326 VDSYLHQ 332
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 133/339 (39%), Gaps = 51/339 (15%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ +S +GK L F Q PN FT+ + + R + ++ + M+
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK 188
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYP-PMPYINFLVAKLSQENETV 123
Y G L+ K ++ +A V++ ++ + ++ A L +E
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE---A 245
Query: 124 PLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFV 183
L E +++ LA F V+ R+ + A+ L EM P +N +
Sbjct: 246 VLVFERMRDEGHRPDHLA---FVTVINTYIRLGKLKDARLLFGEM----SSPDVVAWNVM 298
Query: 184 ITGYCKAGEMEQAVE-MMKLLESR----------------------------------GL 208
I+G+ K G A+E + +S GL
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358
Query: 209 RPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVK 268
++Y + + S YS +MEAA K+ E ++K+ V ++++IRGY + + ++
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF----WNAMIRGYAHNGESHKVME 414
Query: 269 LLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHA 307
L +MK G ++ + L+ S C + D E + H+
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLL-STCAASHDLEMGSQFHS 452
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ + A CR++ A+ L EM+ G ++ ++ Y K + AV +M ++
Sbjct: 391 YAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMK 450
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
RG +P+++ Y + + ++ A KI +E K+ + V Y S+I Y + ++ +
Sbjct: 451 QRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELE 510
Query: 265 EAVKLLTEMK 274
V+L E +
Sbjct: 511 RCVELYQEFR 520
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 7/161 (4%)
Query: 139 ELAKKRFPAVVRALCRVKD-------VGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAG 191
E+ KK F V A + D + A +LM +M G P ++N +I + +A
Sbjct: 413 EMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAM 472
Query: 192 EMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYH 251
++ +A ++ K ++ + PD +Y + S Y+ E+E ++ +E + + +
Sbjct: 473 DLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAG 532
Query: 252 SLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
++ + K + DE ++LL +MK G R++ Y + +L
Sbjct: 533 IMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNAL 573
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
ALEVL+E+ + + + ++RA ++V ++L E + V+
Sbjct: 267 ALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVL 326
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVL 245
Y + G ME +E++ + L+ I +G+S A K+ E A K+
Sbjct: 327 MYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEA 386
Query: 246 TPVIYHSLIRGYCKMEQ-------FDE----------------------------AVKLL 270
V Y I YC++E+ FDE AV+L+
Sbjct: 387 GQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLM 446
Query: 271 TEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELK 310
+MK+ G + N+ Y+ LI + +AMD AEK+ E+K
Sbjct: 447 AKMKQRGCKPNIWIYNSLID-MHGRAMDLRRAEKIWKEMK 485
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMK-LLESRGLRPDVYTYAVIASGYSNGGEMEAARK 233
P +N +I +C G +++A+E+ + +L + P TY + G G + A
Sbjct: 214 PNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAAS 273
Query: 234 ILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
+L E K +Y++LIRGY + FD+AV+ E+K
Sbjct: 274 LLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELK 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 31/256 (12%)
Query: 43 IEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGK 102
+++L R S D A + ++ + + + P ++ ++ + + K+ E+ ++++ +
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 103 YPP--MPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRF-PAVV------RALC 153
P + Y + A + N V ALEV + I LA F P+ V + L
Sbjct: 212 IVPNVVSYNQIINAHCDEGN--VDEALEVYRHI------LANAPFAPSSVTYRHLTKGLV 263
Query: 154 RVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVY 213
+ +G A L+ EM++ G + V+N +I GY G+ ++AVE L+S+ VY
Sbjct: 264 QAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCT---VY 320
Query: 214 TYAVIAS----GYSNGGE---MEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEA 266
V A+ + G + ME+ R +L++ + H P + L+ + K + DEA
Sbjct: 321 DGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMH----PPTGNVLLEVFLKFGKKDEA 376
Query: 267 VKLLTEMKEFGVRVNV 282
L EM + N+
Sbjct: 377 WALFNEMLDNHAPPNI 392
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 91/223 (40%), Gaps = 4/223 (1%)
Query: 77 LLVWLCKG--KKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIP 134
LL C+ + H V + G P + V L E V A +++KE+
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKELT 186
Query: 135 GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD-GPPPGNAVFNFVITGYCKAGEM 193
+ +++ LC+ KD+ + + EM D P F +I C + +
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 194 EQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
+A+ ++ L + G +PD + Y I G+ + A + ++ K++ + Y++L
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
I G K + +EA L M + G + Y L+ +C K
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
EP+ T + + +L D A + +++ + S P+ Y+ LL LCK K L H
Sbjct: 156 EPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL---HV 212
Query: 93 VYKAAIELGK----YPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAV 148
VY+ E+ P + L+ + ++ + A+ ++ ++ + + +
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCN-SKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 149 VRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGL 208
++ C + A + +M +G P +N +I G KAG +E+A +K + G
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 209 RPDVYTYAVIASGYSNGG 226
PD TY + +G G
Sbjct: 332 EPDTATYTSLMNGMCRKG 349
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 117/278 (42%), Gaps = 11/278 (3%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ + K K + +++ + QC+PN TY + A R + A + +++ +
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLV-----AKLSQE 119
P+ Y L+ + A ++ +G P N +V A L +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
E V ++ L P K ++ A + +DV + ++ EM +G P V
Sbjct: 410 AEAVFEEMKRLGIAP------TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 463
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
N ++ Y + G+ + +++ +E+ D+ TY ++ + Y G +E ++ E K
Sbjct: 464 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 523
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
+K+ V + S I Y + + + + +++ EM + G
Sbjct: 524 EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ A+V A R A+++ ++ DG P V+N ++ Y +AG A E+ L++
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G PD +Y ++ Y G A + EE K+ T + L+ Y K
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
+ ++ EM E GV + + ++ +L + + EK+ AE+ ENG
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSML-NLYGRLGQFTKMEKILAEM-ENG 490
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 125/297 (42%), Gaps = 37/297 (12%)
Query: 15 GKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSV 74
G + A++VF++ + +C+P + TY L I LY +++ +S W
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMIN-LYGKAS--------------KSYMSWKLY 309
Query: 75 GDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIP 134
++ CK P + LV ++E A E+ +++
Sbjct: 310 CEMRSHQCK--------------------PNICTYTALVNAFAREG-LCEKAEEIFEQLQ 348
Query: 135 GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEME 194
D E + A++ + R A ++ M G P A +N ++ Y +AG
Sbjct: 349 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI 254
A + + ++ G+ P + ++ ++ S YS ++ I++E + + +S++
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 255 RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
Y ++ QF + K+L EM+ ++ Y+ LI ++ KA E E+L ELKE
Sbjct: 469 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILI-NIYGKAGFLERIEELFVELKE 524
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 117/278 (42%), Gaps = 11/278 (3%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ + K K + +++ + QC+PN TY + A R + A + +++ +
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLV-----AKLSQE 119
P+ Y L+ + A ++ +G P N +V A L +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
E V ++ L P K ++ A + +DV + ++ EM +G P V
Sbjct: 388 AEAVFEEMKRLGIAP------TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 441
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
N ++ Y + G+ + +++ +E+ D+ TY ++ + Y G +E ++ E K
Sbjct: 442 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 501
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFG 277
+K+ V + S I Y + + + + +++ EM + G
Sbjct: 502 EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ A+V A R A+++ ++ DG P V+N ++ Y +AG A E+ L++
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G PD +Y ++ Y G A + EE K+ T + L+ Y K
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENG 313
+ ++ EM E GV + + ++ +L + + EK+ AE+ ENG
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSML-NLYGRLGQFTKMEKILAEM-ENG 468
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 125/297 (42%), Gaps = 37/297 (12%)
Query: 15 GKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSV 74
G + A++VF++ + +C+P + TY L I LY +++ +S W
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMIN-LYGKAS--------------KSYMSWKLY 287
Query: 75 GDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIP 134
++ CK P + LV ++E A E+ +++
Sbjct: 288 CEMRSHQCK--------------------PNICTYTALVNAFAREG-LCEKAEEIFEQLQ 326
Query: 135 GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEME 194
D E + A++ + R A ++ M G P A +N ++ Y +AG
Sbjct: 327 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 195 QAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLI 254
A + + ++ G+ P + ++ ++ S YS ++ I++E + + +S++
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 255 RGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
Y ++ QF + K+L EM+ ++ Y+ LI ++ KA E E+L ELKE
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILI-NIYGKAGFLERIEELFVELKE 502
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Query: 86 KLKEAHAVYKAAIELGKYP-PMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKR 144
L E V K +LG P Y F++ +S + T A EV + I + +
Sbjct: 273 NLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTE--AKEVAEVIVSGKFPMDNDI 330
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
A++ ++ V D +A + ++ M++ G P + + C+ + + ++ +LL
Sbjct: 331 LDALIGSVSAV-DPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLS 389
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
S+G ++ +Y+++ S G + + L+E KK+ +Y++LI CK E
Sbjct: 390 SKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIR 449
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
A KL EM G ++N+ Y+ LI+ L
Sbjct: 450 PAKKLWDEMFVEGCKMNLTTYNVLIRKL 477
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 120/294 (40%), Gaps = 16/294 (5%)
Query: 7 LVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEA------LYRRSAFDWALPVCQ 60
++ S K + A + E+ C+P+ Y + EA LY R V +
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQV------VLK 282
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYP-PMPYINFLVAKLSQE 119
K P ++ L K+L EA V + + GK+P ++ L+ +S
Sbjct: 283 KKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVS-GKFPMDNDILDALIGSVSAV 341
Query: 120 NETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV 179
+ A+E L + + A + + + LCR + + + G
Sbjct: 342 DPDS--AVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQS 399
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
++ +I+ CKAG + ++ ++ ++ GL PDV Y + + A+K+ +E
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMF 459
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLC 293
+ + Y+ LIR + + +E+++L +M E G+ + Y LI+ LC
Sbjct: 460 VEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLC 513
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 177 NAVFNFVITG------YCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEA 230
N +F ++T Y K+G E+A E + L+S GLRPD Y + GY N G+ +
Sbjct: 413 NGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKL 472
Query: 231 ARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMK 274
++++E + K + +Y +L+R Y +M + A + + M+
Sbjct: 473 GERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQ 516
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 126/317 (39%), Gaps = 7/317 (2%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ + L+ K G+ + A+ +F + + C P++ Y I A AL +
Sbjct: 135 VYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGY 194
Query: 63 LDA-----RSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS 117
LD R P + LL + K+ + +A++K +++ P Y V
Sbjct: 195 LDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKD-LDMSPVSPDVYTFNGVMDAY 253
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
+N + VL + + + F ++ + + ++ +Q ++ P
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
FN +I Y KA +++A + K + P TY + Y G + AR+I EE
Sbjct: 314 PTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
+ VL ++++ YC+ + EA KL F V + Y K + KA
Sbjct: 374 VGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY-KFLYKAYTKAD 432
Query: 298 DWETAEKLHAELKENGL 314
E + L +++++G+
Sbjct: 433 MKEQVQILMKKMEKDGI 449
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N ++ ++ K G K V + +C+P+ T+ + I++ ++ F+ +
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
++ ++ P + +++ K + + +A V+K ++ P ++ +
Sbjct: 303 SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIM-MYGYC 361
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+V A E+ +E+ R L A++ CR A +L A P + +
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
F+ Y KA EQ +MK +E G+ P+
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 168 MIADGPPPGNAV-FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGG 226
M+ D N V +N +++G A ++ A +M +E G++PD T+ +ASGY+ G
Sbjct: 281 MVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG 340
Query: 227 EMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYD 286
+ E A ++ + K+K V + ++ G K F A+K+ +M+E GV N
Sbjct: 341 KPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMS 400
Query: 287 KLIQSL-CLKAMDWETAEKLHA 307
L++ L CL + + +++H
Sbjct: 401 TLLKILGCLSLL--HSGKEVHG 420
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 126/317 (39%), Gaps = 7/317 (2%)
Query: 3 ILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKM 62
+ + L+ K G+ + A+ +F + + C P++ Y I A AL +
Sbjct: 135 VYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGY 194
Query: 63 LDA-----RSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLS 117
LD R P + LL + K+ + +A++K +++ P Y V
Sbjct: 195 LDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKD-LDMSPVSPDVYTFNGVMDAY 253
Query: 118 QENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGN 177
+N + VL + + + F ++ + + ++ +Q ++ P
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313
Query: 178 AVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEE 237
FN +I Y KA +++A + K + P TY + Y G + AR+I EE
Sbjct: 314 PTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373
Query: 238 AKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAM 297
+ VL ++++ YC+ + EA KL F V + Y K + KA
Sbjct: 374 VGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY-KFLYKAYTKAD 432
Query: 298 DWETAEKLHAELKENGL 314
E + L +++++G+
Sbjct: 433 MKEQVQILMKKMEKDGI 449
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+Y N ++ ++ K G K V + +C+P+ T+ + I++ ++ F+ +
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
++ ++ P + +++ K + + +A V+K ++ P ++ +
Sbjct: 303 SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIM-MYGYC 361
Query: 121 ETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVF 180
+V A E+ +E+ R L A++ CR A +L A P + +
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 181 NFVITGYCKAGEMEQAVEMMKLLESRGLRPD 211
F+ Y KA EQ +MK +E G+ P+
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 162 KQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASG 221
+++ LEM+ DG N ++ +IT + +A+E + + GL PD TY+ I
Sbjct: 206 EEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDV 265
Query: 222 YSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
YS G++E + E A + + L + + + +D +L EMK V+ N
Sbjct: 266 YSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPN 325
Query: 282 VDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
V Y+ L++++ +A A L E+ E GL
Sbjct: 326 VVVYNTLLEAMG-RAGKPGLARSLFNEMLEAGL 357
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
+ALE++K D EL + ++ R A + M G P ++ ++
Sbjct: 208 MALEMVK----DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAIL 263
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
Y K+G++E+ + + + + G +PD ++V+ + G+ + R +L+E K
Sbjct: 264 DVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVK 323
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ 290
V+Y++L+ + + A L EM E G+ N L++
Sbjct: 324 PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVK 369
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 102/237 (43%), Gaps = 15/237 (6%)
Query: 81 LCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRREL 140
L ++ +A VY+A ++ YP L+ L + + E+ +++ +
Sbjct: 283 LSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKW 342
Query: 141 AKKRFPAVVRALCRVKDVGTAKQLML---EMIADGPPPGNAVFNFVITGYCKAGEMEQAV 197
++ F +V++ C D G ++ ++ EM G V+N ++ Y K+ +E+
Sbjct: 343 SQDVFGGLVKSFC---DEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVE 399
Query: 198 EMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI--YHSLIR 255
+ + +GL+P TY ++ Y+ + + +L E + L P + Y LI
Sbjct: 400 GLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLG--LEPNVKSYTCLIS 457
Query: 256 GYCKMEQF-DEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKE 311
Y + ++ D A MK+ G++ + Y LI + + W EK +A +E
Sbjct: 458 AYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG--WH--EKAYASFEE 510
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 146 PAVVRALCRVKDVGTAKQLMLEMIAD--------GPPPGNAVFNFVITGYCKAGEMEQAV 197
P V C + G K+ M +M AD G P + + +I Y +G E+A
Sbjct: 447 PNVKSYTCLISAYGRTKK-MSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAY 505
Query: 198 EMMKLLESRGLRPDVYTYAVIASGYSNGGE----MEAARKILEEAKKKHSVLTPVIYHSL 253
+ + G++P V TY + + G+ ME + +L E K T + Y++L
Sbjct: 506 ASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG----TRITYNTL 561
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
+ G+ K + EA +++E + G++ +V Y+ L+ + D
Sbjct: 562 LDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQD 606
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 29/175 (16%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFN-----FVITGYCKAGEMEQAVEM 199
+ +V+ AL ++ D+ +++M E A G+++F+ +ITGYCK G ME+A E+
Sbjct: 318 YISVISALLKMDDIEEVEKIMEEWEA-----GHSLFDIRIPHLLITGYCKKGMMEKAEEV 372
Query: 200 MKLLESRGLRPDVYTYAVIASGYSNGGEMEAA----RKILEEAK---KKHSV--LTPVIY 250
+ +L + D T+ +A GY G+ME A ++ +E +K + H V ++ V Y
Sbjct: 373 VNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDY 432
Query: 251 HSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
+ G ME + ++LL+E YD+L+ + + W+ + +
Sbjct: 433 ---LEGQRDMEGLRKILRLLSERGHIS-------YDQLLYDMNGAGLSWKIVDAM 477
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ +V+ AL ++ D+ +++M E A + + +ITGYCK G ME+A E++ +L
Sbjct: 223 YISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILV 282
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAA----RKILEEAK---KKHSV--LTPVIYHSLIR 255
+ D T+ +A GY G+ME A ++ +E +K + H V ++ V Y +
Sbjct: 283 QKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDY---LE 339
Query: 256 GYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEKL 305
G ME + ++LL+E YD+L+ + + W+ + +
Sbjct: 340 GQRDMEGLRKILRLLSERGHIS-------YDQLLYDMNGAGLSWKIVDAM 382
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%)
Query: 162 KQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASG 221
+ L +M ++G P V N +I Y K E+++A+ + K + G P+ YTY+ + G
Sbjct: 208 RSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKG 267
Query: 222 YSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVN 281
G + +E + K V Y LI + DEAV+++ +M + +
Sbjct: 268 VCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPD 327
Query: 282 VDEYDKLIQSLC 293
+ Y+ ++ LC
Sbjct: 328 MLTYNTVLTELC 339
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ +++R A L L M+ G P F F ++ K+ +++ L+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G D++ + Y+ GE+++ARK+ +E +++ V + S+I GY + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN----VVSWTSMICGYARRDFAK 217
Query: 265 EAVKLLTEM-KEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+AV L M ++ V N +I S C K D ET EK++A ++ +G+
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVI-SACAKLEDLETGEKVYAFIRNSGI 267
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
+ +++R A L L M+ G P F F ++ K+ +++ L+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
G D++ + Y+ GE+++ARK+ +E +++ V + S+I GY + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN----VVSWTSMICGYARRDFAK 217
Query: 265 EAVKLLTEM-KEFGVRVNVDEYDKLIQSLCLKAMDWETAEKLHAELKENGL 314
+AV L M ++ V N +I S C K D ET EK++A ++ +G+
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVI-SACAKLEDLETGEKVYAFIRNSGI 267
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 111/275 (40%), Gaps = 11/275 (4%)
Query: 20 ALEVFEKFEVFQC-EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLL 78
A+E+FE F+ C E N Y + + L + + + + +M+ P + G L+
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 79 VWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRR 138
KG A ++G P +V ++ ++ A E K+ D
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPD-EVTTGIVLQMYKKAREFQKAEEFFKKWSCDEN 288
Query: 139 E------LAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGE 192
+ L+ + ++ + + A + M+ +G P FN +I Y G+
Sbjct: 289 KADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQ 348
Query: 193 MEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHS 252
+ + +MK ++ PD TY ++ S ++ ++E A +E K PV Y +
Sbjct: 349 LGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 253 LIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDK 287
L+ + +EA L+ EM + V +DEY +
Sbjct: 408 LLYAFSIRHMVEEAEGLIAEMDDDNVE--IDEYTQ 440
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 179 VFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEA 238
+N +I Y K+G++++A E K + G+ P T+ + Y N G++ ++ +
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM-KT 358
Query: 239 KKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMD 298
K H Y+ LI + K + A EMK+ G++ + Y L+ + ++ M
Sbjct: 359 MKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM- 417
Query: 299 WETAEKLHAELKENGLYLKGATR-ALIRAVKEME 331
E AE L AE+ ++ + + T+ AL R E E
Sbjct: 418 VEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAE 451
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 183 VITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH 242
VI+ + K G++ A E+ K + + PDV Y V+ + +++ G ++ A +E K+
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Query: 243 SVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
VIY+SLI+ Y K+ DEA + ++ + N +Y + S C+
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ---SCNKTQYPDVYTSNCM 689
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 121/280 (43%), Gaps = 17/280 (6%)
Query: 1 MYILNDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQ 60
+ + N L+ ++++ G AL +F ++ PN T+ L I +L R D A +
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 61 KMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN 120
+M + IP S ++ + + +EA + E G P I ++ +
Sbjct: 501 QMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAH-- 558
Query: 121 ETVPLALEVLKEIPG-DRRELAKKRFPAVVRAL----CRVKDVGTAKQLMLEMIADGPPP 175
+L + + I G R L ++ +L + D+ A+++ + P
Sbjct: 559 ---LASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 176 GNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKIL 235
NA +I+ Y G +++A+ + + LE GL+PD T + S ++ G++ A +I
Sbjct: 616 SNA----MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIF 671
Query: 236 EEAKKKHSVLTPVIYHS--LIRGYCKMEQFDEAVKLLTEM 273
+ K S + P + H ++ + ++A++L+ EM
Sbjct: 672 TDIVSKRS-MKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 47/283 (16%)
Query: 99 ELGKYPPMPYINFLVAKLSQENETVPL---ALEVLKEIPGDRRELAKKRFPAVVRALCRV 155
E KYP M F VA++ V + A +V E+P + F A++ A
Sbjct: 96 EQNKYPNMSKEGF-VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNS 154
Query: 156 KDVGTAKQLMLEMIAD-GPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYT 214
K + + E+ P A +N +I G C G +AV ++ +E++GL+PD T
Sbjct: 155 KKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHIT 214
Query: 215 YAV-IASGYSNG----GEMEAARKILEEAKK----------------------------K 241
+ + + Y+ G GE AR + + K+ K
Sbjct: 215 FNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLK 274
Query: 242 HSVLTPVI--YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDW 299
+ L P + + ++I+G+ + DEA+ E+++ G R ++ L+ ++C KA D
Sbjct: 275 GNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC-KAGDL 333
Query: 300 ETAEKLHAELKENGLY-----LKGATRALIRAVKEME-NEVVE 336
E+A +L E+ L L+ AL++ K+ E E+VE
Sbjct: 334 ESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 131 KEIPGDRR---ELAKKR----FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV-FNF 182
++I RR EL +R + A++ R+ D+ +A+QL D P N V +N
Sbjct: 313 RDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF-----DTMPKRNVVSWNS 367
Query: 183 VITGYCKAGEMEQAVEMMK-LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKK 241
+I GY G+ A+E + +++ +PD T + S + ++E I++ +K
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN 427
Query: 242 HSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWET 301
L Y SLI Y + EA ++ EMKE +V Y+ L + ET
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKE----RDVVSYNTLFTAFAANGDGVET 483
Query: 302 AEKLHAELKENGL 314
L +++K+ G+
Sbjct: 484 L-NLLSKMKDEGI 495
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 180 FNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAK 239
+N +I+GY K G E+A ++ ++ DV ++ V+ +G++ ++E ARK +
Sbjct: 170 WNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMP 225
Query: 240 KKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKA 296
+K + V +++++ GY + ++A++L +M GVR N + +I + +A
Sbjct: 226 EK----SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA 278
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
Query: 147 AVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL-LES 205
V+ A R G QL + G P +N + Y + E A+E KL +++
Sbjct: 135 TVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDN 194
Query: 206 RGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDE 265
L P + T+ ++ G + +E A +I E+ K V+ PV+Y L+ G K D
Sbjct: 195 APLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADG 254
Query: 266 AVKLLTEMKEFGVRVNVDE---YDKLIQSLCLKAMDWETAEKLHAELKENG 313
+KL E+KE + VD+ Y +L++ +K M+ E E + EN
Sbjct: 255 VLKLYQELKE-KLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENS 304
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 11/223 (4%)
Query: 59 CQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYI--NFLVAKL 116
C K +DA + + + +L W ++ + +A + P + N +V
Sbjct: 95 CGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGY 154
Query: 117 SQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
+Q+ + AL KE + + F ++ A + + + +Q +++ G
Sbjct: 155 AQDG-NLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSN 213
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+ +I Y K G+ME A + + D++ + + SGY+ G+MEAA K+
Sbjct: 214 VVLSCSIIDAYAKCGQMESAKRCFDEMTVK----DIHIWTTLISGYAKLGDMEAAEKLFC 269
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVR 279
E +K PV + +LI GY + + A+ L +M GV+
Sbjct: 270 EMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 10/245 (4%)
Query: 33 EPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWLCKGKKLKEAHA 92
+P + + + AL D+++ K+L P +S + + + KE+
Sbjct: 84 DPFASSRLIAFCALSESRYLDYSV----KILKGIENPNIFSWNVTIRGFSESENPKESFL 139
Query: 93 VYKAAIELG--KYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVR 150
+YK + G + P + ++ K+ + L +L + R EL A +
Sbjct: 140 LYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIH 199
Query: 151 ALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRP 210
D+ A+++ E P +N +I GY K GE E+A+ + KL+ES G++P
Sbjct: 200 MFASCGDMENARKVFDE----SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKP 255
Query: 211 DVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLL 270
D T + S S G++ ++ E K+ +T + ++L+ + K EA ++
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 271 TEMKE 275
+++
Sbjct: 316 DNLEK 320
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 35/252 (13%)
Query: 34 PNSFTY---YLTIEALYRRSAFDWALPVCQKMLDARSIPEWYSVGDLLVWL------CKG 84
PN +Y + EAL R + L + +LD IP+ S+ ++ W K
Sbjct: 33 PNYGSYRRGFSNEEALILRRLSEGGLVHARHLLD--KIPQRGSINRVVYWTSLLSKYAKT 90
Query: 85 KKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKR 144
L EA +++ E + V K + NE L E+ K +
Sbjct: 91 GYLDEARVLFEVMPERNIVTCNAMLTGYV-KCRRMNEAWTLFREMPKNVVS--------- 140
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAV-FNFVITGYCKAGEMEQAVEMMKLL 203
+ ++ ALC A +L EM P N V +N ++TG + G+ME+A ++ +
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEM-----PERNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 204 ESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQF 263
SR DV ++ + GY ME A+ + + +K+ V + S++ GYC+
Sbjct: 196 PSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKN----VVTWTSMVYGYCRYGDV 247
Query: 264 DEAVKLLTEMKE 275
EA +L EM E
Sbjct: 248 REAYRLFCEMPE 259
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIAD-GPPPGNAVFNFVI 184
A +V +E+P + + F A++ A K ++L E+ P +N +I
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLI 187
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
C+ + +AV ++ +E++GL+PD+ T+ + G+ E +I + +K+
Sbjct: 188 KALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVA 247
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQ-SLCLKAMDWETAE 303
+ Y++ + G + E V L E+K G++ +V ++ +I+ S+ MD AE
Sbjct: 248 IDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMD--EAE 305
Query: 304 KLHAELKENGLYLKGATRALI 324
+ E+ ++G AT AL+
Sbjct: 306 AWYKEIVKHGYRPDKATFALL 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 2/257 (0%)
Query: 11 FSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLDARSI-P 69
+ K G + A +VFE+ C+ + ++ + A FD + ++ SI P
Sbjct: 119 YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKP 178
Query: 70 EWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVPLALEV 129
+ S L+ LC+ L EA A+ G P + N L+ S L E+
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS-SYLKGQFELGEEI 237
Query: 130 LKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCK 189
++ + + + A + L L E+ A G P FN +I G
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 190 AGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVI 249
G+M++A K + G RPD T+A++ G+ E+A ++ +E K ++
Sbjct: 298 EGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTT 357
Query: 250 YHSLIRGYCKMEQFDEA 266
L+ K + +EA
Sbjct: 358 LQQLVDELVKGSKREEA 374
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F V+ A + K+ A+QLML+M G P + ++ I E + ++K+++
Sbjct: 332 FNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLKVMQ 391
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
+ L+P T A +A+ S +++ A +L++ + S P +++L+ Y ++Q +
Sbjct: 392 QQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISEC-SYSYP--FNNLLAAYDSLDQPE 448
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQ 290
AV++L MKE +R ++ Y+ L
Sbjct: 449 RAVRVLARMKELKLRPDMRTYELLFS 474
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 145 FPAVVRALCRVK---DVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMK 201
FP V +A C K D+ K L + + G N +I Y ++ A+++
Sbjct: 118 FPFVFKA-CAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFD 176
Query: 202 LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKME 261
R DV TY V+ G E+ AR++ + + V ++SLI GY +M
Sbjct: 177 ENPQR----DVVTYNVLIDGLVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMN 228
Query: 262 QFDEAVKLLTEMKEFGVRV-NVDEYDKLIQSLCLKAMDWETAEKLHAELKENGLYL 316
EA+KL EM G++ NV L S C ++ DW+ + +H K L++
Sbjct: 229 HCREAIKLFDEMVALGLKPDNVAIVSTL--SACAQSGDWQKGKAIHDYTKRKRLFI 282
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 175 PGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKI 234
P + +I YC +G+ E+A+E+M+ +E +G+ + + I G ++ A +
Sbjct: 172 PDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESL 231
Query: 235 LEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCL 294
E K L +Y+ + K E + +L+ EM G++ + Y+ L+ + C+
Sbjct: 232 WIEMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCV 290
Query: 295 KAMDWETAEKLHAELKE---------------NGLYLKGAT 320
K M E A+K++ L++ NGLY +G T
Sbjct: 291 KGMMSE-AKKVYEGLEQPNAATFRTLIFHLCINGLYDQGLT 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 126 ALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVIT 185
A+E+++++ E+ F ++ +L + V A+ L +EM+ G N V+N +
Sbjct: 193 AMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLM 252
Query: 186 GYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKH-SV 244
K E+ E+M+ + S GL+PD +Y + + Y G M A+K+ E ++ + +
Sbjct: 253 NAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQPNAAT 311
Query: 245 LTPVIYHSLIRG 256
+I+H I G
Sbjct: 312 FRTLIFHLCING 323
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/310 (18%), Positives = 125/310 (40%), Gaps = 45/310 (14%)
Query: 5 NDLVFSFSKLGKGKAALEVFEKFEVFQCEPNSFTYYLTIEALYRRSAFDWALPVCQKMLD 64
N ++ F + G+ + ALE+F + E EPNS + + I A R
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSR---------------- 220
Query: 65 ARSIPEWYSVGDLLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQENETVP 124
L+WL +GK++ K EL + Y+N + + + + +
Sbjct: 221 -------------LLWLERGKEIHR--KCVKKGFELDE-----YVNSALVDMYGKCDCLE 260
Query: 125 LALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVI 184
+A EV +++P R+ L + ++++ D + +++ MI +G P ++
Sbjct: 261 VAREVFQKMP--RKSLVA--WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316
Query: 185 TGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSV 244
++ + + + + D+Y + Y GE A + + +K
Sbjct: 317 MACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD--- 373
Query: 245 LTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSLCLKAMDWETAEK 304
++ +I Y + + +AV++ +M GV+ +V + ++ + C + E ++
Sbjct: 374 -VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA-CSQLAALEKGKQ 431
Query: 305 LHAELKENGL 314
+H + E+ L
Sbjct: 432 IHLSISESRL 441
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 145 FPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLE 204
F V+ A + K+ A+QLML+M G P + ++ I E + ++K+++
Sbjct: 336 FNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLKVMQ 395
Query: 205 SRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFD 264
+ L+P T A +A+ S +++ A +L++ + S P +++L+ Y ++Q +
Sbjct: 396 QQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISEC-SYSYP--FNNLLAAYDSLDQPE 452
Query: 265 EAVKLLTEMKEFGVRVNVDEYDKLIQ 290
AV++L MKE +R ++ Y+ L
Sbjct: 453 RAVRVLARMKELKLRPDMRTYELLFS 478
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 143 KRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKL 202
K + + + L K A L M+++G P V+ +I+ Y K+ +++A ++
Sbjct: 145 KTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEY 204
Query: 203 LES-RGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKME 261
++S +PDV+T+ V+ S G + + I+ E + V Y+++I GY K
Sbjct: 205 MKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAG 264
Query: 262 QFDEAVKLLTEMKEFG 277
F+E +L +M E G
Sbjct: 265 MFEEMESVLADMIEDG 280
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 105 PMPYINFLVAKLSQENETVPLALEVLKEI---PGDRRELAKKRFPAVVRALCRVKDVGTA 161
P+ L+A + N+ + L+ V +E+ PG + L+ + + RA D
Sbjct: 104 PISVFKNLLAAAGELND-MKLSCRVFREVLILPG-KEPLSSDCYLNLARAFINTDDCTYL 161
Query: 162 KQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASG 221
L+ E+ P V N +I + + ++++ + ++K ++ +PDV TY +
Sbjct: 162 TSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDI 221
Query: 222 YSNGGEMEAARKILEEAKKKHSVLTPVI-YHSLIRGYCKMEQFDEAVKLLTEMKEFGVRV 280
G + +L K+ SV +I Y++++ G K +FD + + EM + G+
Sbjct: 222 LGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEP 281
Query: 281 NVDEYDKLIQSL 292
++ Y +I SL
Sbjct: 282 DLLSYTAVIDSL 293
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 16/217 (7%)
Query: 63 LDARSIPEWYSVGDL--LVWLCKGKKLKEAHAVYKAAIELG----KYPPMPYINFLVAKL 116
L + S P + S+ + L L K L+ ++ I++G Y I F + L
Sbjct: 20 LPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI--L 77
Query: 117 SQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPG 176
S E +P A+ V K I + F R D +A +L + MI+ G P
Sbjct: 78 SPHFEGLPYAISVFKTIQEPNLLIWNTMF----RGHALSSDPVSALKLYVCMISLGLLPN 133
Query: 177 NAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIASGYSNGGEMEAARKILE 236
+ F FV+ K+ ++ ++ + G D+Y + + S Y G +E A K+ +
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193
Query: 237 EAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEM 273
++ + V Y +LI+GY + A KL E+
Sbjct: 194 KSPHR----DVVSYTALIKGYASRGYIENAQKLFDEI 226
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 92/219 (42%), Gaps = 5/219 (2%)
Query: 77 LLVWLCKGKKLKEAHAVYKAAIELGKYPPMPYINFLVAKLSQEN--ETVPLALEVLKEIP 134
LLV L K + A ++ +E G P + L+A ++ N + L+ +K P
Sbjct: 130 LLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFP 189
Query: 135 GDRRELAKKRFPAVVRALCRVKDVGTAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEME 194
+ ++ + +++A L EM P N V++GY + G +
Sbjct: 190 QCQPDVFT--YSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFD 247
Query: 195 QAVEMMK-LLESRGLRPDVYTYAVIASGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSL 253
Q +++ +L S +PDV+T +I S + N G+++ E+ + ++ L
Sbjct: 248 QMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNIL 307
Query: 254 IRGYCKMEQFDEAVKLLTEMKEFGVRVNVDEYDKLIQSL 292
I Y K +D+ ++ M++ Y+ +I++
Sbjct: 308 IGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAF 346
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 160 TAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIA 219
T + L +M+ G P N ++ G E++ ++ +G P+ +Y +
Sbjct: 206 TVRSLFRQMVDSGIEPDVFALNCLV-----KGRTINTRELLSEMKGKGFVPNGKSYNSLV 260
Query: 220 SGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVR 279
+ ++ GE++ A K L E + V+ + Y +L+ C+ ++DEA +LL ++E +
Sbjct: 261 NAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL- 319
Query: 280 VNVDEYDKL 288
V++D DKL
Sbjct: 320 VDIDSDDKL 328
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 160 TAKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIA 219
T + L +M+ G P N ++ G E++ ++ +G P+ +Y +
Sbjct: 231 TVRSLFRQMVDSGIEPDVFALNCLV-----KGRTINTRELLSEMKGKGFVPNGKSYNSLV 285
Query: 220 SGYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKLLTEMKEFGVR 279
+ ++ GE++ A K L E + V+ + Y +L+ C+ ++DEA +LL ++E +
Sbjct: 286 NAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL- 344
Query: 280 VNVDEYDKL 288
V++D DKL
Sbjct: 345 VDIDSDDKL 353
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 101 GKYPPMPYINFLVAKLSQENETVPLALEVLKEIPGDRRELAKKRFPAVVRALCRVKDVGT 160
G + + L+++L + + AL V+ ++ R L + ++ +L R +
Sbjct: 102 GGFSRKNAYDILISRLCKLGR-IDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEE 160
Query: 161 AKQLMLEMIADGPPPGNAVFNFVITGYCKAGEMEQAVEMMKLLESRGLRPDVYTYAVIAS 220
A +++ M + +N+ +T +C GE+E A E+M+ +E G PD +Y +
Sbjct: 161 AWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVL 220
Query: 221 GYSNGGEMEAARKILEEAKKKHSVLTPVIYHSLIRG 256
G G++EAA IL ++ + + +I G
Sbjct: 221 GACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITG 256
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 174 PPGNAVFNFVITGYCKA---GEMEQAVEMMKLLESRG-LRPDVYTYAVIASGYSNGGEME 229
PP + +NF+I GY A +ME + MK RG + PD TY ++ GY+N G +
Sbjct: 206 PPNSVTYNFLIAGYMTAWNWDKMEATFQEMK----RGPVEPDTDTYQLMLRGYANSGNLN 261
Query: 230 AARKILEEAKKKHSVLTPVIYHSLIRGYCKMEQFDEAVKL 269
++ E K + V + + ++I YCK D K+
Sbjct: 262 RMEEMYEVIKDQVGVNSGPLVRAMICAYCKKAVEDRVQKI 301