Miyakogusa Predicted Gene
- Lj0g3v0122109.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0122109.1 Non Chatacterized Hit- tr|A9NTU4|A9NTU4_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,45.88,4e-16,seg,NULL; RRM,RNA recognition motif domain; RNA-BINDING
PROTEIN, PUTATIVE,NULL; FAMILY NOT NAMED,NUL,CUFF.7311.1
(313 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RN... 305 3e-83
AT5G50250.1 | Symbols: CP31B | chloroplast RNA-binding protein 3... 293 9e-80
AT2G37220.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 179 2e-45
AT1G60000.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 155 2e-38
AT3G52380.1 | Symbols: CP33, PDE322 | chloroplast RNA-binding pr... 145 4e-35
AT3G52150.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 128 6e-30
AT3G52150.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 128 6e-30
AT2G35410.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 112 2e-25
AT1G01080.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 110 2e-24
AT1G01080.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 107 8e-24
AT3G53460.3 | Symbols: CP29 | chloroplast RNA-binding protein 29... 102 4e-22
AT3G53460.2 | Symbols: CP29 | chloroplast RNA-binding protein 29... 102 4e-22
AT3G53460.1 | Symbols: CP29 | chloroplast RNA-binding protein 29... 102 4e-22
AT3G53460.4 | Symbols: CP29 | chloroplast RNA-binding protein 29... 102 4e-22
AT3G16380.1 | Symbols: PAB6 | poly(A) binding protein 6 | chr3:5... 100 1e-21
AT1G22760.1 | Symbols: PAB3 | poly(A) binding protein 3 | chr1:8... 96 3e-20
AT3G23830.2 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding ... 95 6e-20
AT3G23830.1 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding ... 95 6e-20
AT5G19350.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 92 3e-19
AT5G19350.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 92 3e-19
AT1G71770.2 | Symbols: PAB5 | poly(A)-binding protein 5 | chr1:2... 92 4e-19
AT1G71770.1 | Symbols: PAB5 | poly(A)-binding protein 5 | chr1:2... 92 4e-19
AT4G13850.3 | Symbols: ATGRP2 | glycine-rich RNA-binding protein... 91 1e-18
AT4G13850.2 | Symbols: ATGRP2 | glycine-rich RNA-binding protein... 91 1e-18
AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | glycine-rich RNA-... 91 1e-18
AT4G13850.4 | Symbols: ATGRP2 | glycine-rich RNA-binding protein... 91 1e-18
AT2G21660.2 | Symbols: ATGRP7, CCR2 | cold, circadian rhythm, an... 91 1e-18
AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold, circa... 91 1e-18
AT1G34140.1 | Symbols: PAB1 | poly(A) binding protein 1 | chr1:1... 86 2e-17
AT3G14100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 86 3e-17
AT5G61030.1 | Symbols: GR-RBP3 | glycine-rich RNA-binding protei... 86 3e-17
AT2G36660.1 | Symbols: PAB7 | poly(A) binding protein 7 | chr2:1... 86 4e-17
AT1G17640.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 85 6e-17
AT3G19130.1 | Symbols: ATRBP47B, RBP47B | RNA-binding protein 47... 85 7e-17
AT1G17370.2 | Symbols: UBP1B | oligouridylate binding protein 1B... 84 8e-17
AT4G39260.2 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 84 9e-17
AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 84 9e-17
AT4G39260.3 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 84 1e-16
AT1G17370.1 | Symbols: UBP1B | oligouridylate binding protein 1B... 84 1e-16
AT5G40490.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 82 3e-16
AT2G18510.1 | Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs... 82 4e-16
AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/R... 82 4e-16
AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/R... 82 6e-16
AT5G54900.1 | Symbols: ATRBP45A, RBP45A | RNA-binding protein 45... 81 1e-15
AT4G36960.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 80 2e-15
AT4G36960.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 80 2e-15
AT4G26650.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 79 3e-15
AT4G26650.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 79 3e-15
AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein 1A... 79 3e-15
AT1G49600.1 | Symbols: ATRBP47A, RBP47A | RNA-binding protein 47... 79 3e-15
AT2G23350.1 | Symbols: PAB4, PABP4 | poly(A) binding protein 4 |... 79 4e-15
AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding pro... 79 5e-15
AT1G60650.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 78 7e-15
AT1G60650.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 78 7e-15
AT3G13224.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 77 1e-14
AT3G26420.1 | Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs... 77 1e-14
AT1G74230.1 | Symbols: GR-RBP5 | glycine-rich RNA-binding protei... 77 1e-14
AT3G07810.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 77 1e-14
AT3G07810.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 77 1e-14
AT3G13224.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 77 1e-14
AT5G47620.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 77 2e-14
AT5G47620.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 77 2e-14
AT4G09040.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 75 4e-14
AT4G27000.1 | Symbols: ATRBP45C | RNA-binding (RRM/RBD/RNP motif... 75 4e-14
AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein 1A... 75 5e-14
AT5G55550.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 75 7e-14
AT5G55550.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 75 7e-14
AT4G09040.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 75 7e-14
AT5G55550.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 75 8e-14
AT5G55550.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 75 8e-14
AT3G08000.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 75 8e-14
AT1G49760.2 | Symbols: PAB8 | poly(A) binding protein 8 | chr1:1... 74 1e-13
AT1G49760.1 | Symbols: PAB8, PABP8 | poly(A) binding protein 8 |... 74 1e-13
AT4G36690.3 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor, l... 74 1e-13
AT4G36690.2 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor, l... 74 1e-13
AT4G36690.1 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor, l... 72 4e-13
AT1G60900.1 | Symbols: | U2 snRNP auxilliary factor, large subu... 72 4e-13
AT4G36690.4 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor, l... 72 4e-13
AT5G47320.1 | Symbols: RPS19 | ribosomal protein S19 | chr5:1920... 71 8e-13
AT5G19960.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 71 1e-12
AT1G47500.1 | Symbols: ATRBP47C', RBP47C' | RNA-binding protein ... 71 1e-12
AT4G13860.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 70 2e-12
AT3G55340.1 | Symbols: PHIP1 | phragmoplastin interacting protei... 70 2e-12
AT4G39260.4 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 70 2e-12
AT1G71800.1 | Symbols: CSTF64 | cleavage stimulating factor 64 |... 70 3e-12
AT1G47490.2 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47... 69 3e-12
AT5G09880.1 | Symbols: | Splicing factor, CC1-like | chr5:30816... 69 3e-12
AT5G04280.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 69 4e-12
AT4G14300.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 69 4e-12
AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47... 69 5e-12
AT3G15010.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 69 6e-12
AT3G15010.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 69 6e-12
AT2G33410.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 67 1e-11
AT5G47620.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 66 2e-11
AT2G41060.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 65 4e-11
AT2G41060.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 65 4e-11
AT2G43410.4 | Symbols: FPA | RNA binding | chr2:18026397-1803098... 65 4e-11
AT2G43410.3 | Symbols: FPA | RNA binding | chr2:18026397-1803098... 65 4e-11
AT2G43410.2 | Symbols: FPA | RNA binding | chr2:18026397-1803098... 65 4e-11
AT5G41690.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 65 4e-11
AT2G43410.1 | Symbols: FPA | RNA binding | chr2:18026397-1803098... 65 4e-11
AT5G06210.1 | Symbols: | RNA binding (RRM/RBD/RNP motifs) famil... 65 4e-11
AT5G51300.3 | Symbols: | splicing factor-related | chr5:2084988... 65 5e-11
AT5G51300.2 | Symbols: | splicing factor-related | chr5:2084988... 65 5e-11
AT5G51300.1 | Symbols: | splicing factor-related | chr5:2084988... 65 5e-11
AT3G18610.1 | Symbols: PARLL1, ATNUC-L2, NUC-L2 | nucleolin like... 65 7e-11
AT5G06000.1 | Symbols: EIF3G2, ATEIF3G2 | eukaryotic translation... 65 9e-11
AT1G03457.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 64 1e-10
AT1G03457.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 64 1e-10
AT2G21690.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 64 1e-10
AT1G18630.1 | Symbols: GR-RBP6 | glycine-rich RNA-binding protei... 64 2e-10
AT4G03110.1 | Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding protein-... 64 2e-10
AT2G21440.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 63 2e-10
AT4G00830.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 4e-10
AT4G00830.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 62 4e-10
AT4G16280.4 | Symbols: | RNA binding;abscisic acid binding | ch... 62 6e-10
AT4G16280.2 | Symbols: FCA | RNA binding;abscisic acid binding |... 61 8e-10
AT4G16280.3 | Symbols: FCA | RNA binding;abscisic acid binding |... 61 9e-10
AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation... 61 1e-09
AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation... 61 1e-09
AT1G48920.1 | Symbols: ATNUC-L1, PARL1, NUC-L1 | nucleolin like ... 60 3e-09
AT4G00830.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 59 3e-09
AT5G11412.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 59 5e-09
AT3G61860.1 | Symbols: ATRSP31, RSP31, At-RS31, RS31 | RNA-bindi... 58 7e-09
AT3G46020.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 58 7e-09
AT1G22330.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 58 1e-08
AT3G47120.1 | Symbols: | RNA recognition motif (RRM)-containing... 57 1e-08
AT1G76460.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 1e-08
AT4G25500.4 | Symbols: RSP35, RS40, At-RS40 | arginine/serine-ri... 57 2e-08
AT4G25500.1 | Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40, ... 57 2e-08
AT5G08695.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 2e-08
AT3G52660.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 56 3e-08
AT3G52660.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 56 3e-08
AT4G00830.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 56 3e-08
AT3G10400.1 | Symbols: | RNA recognition motif and CCHC-type zi... 56 3e-08
AT4G03110.2 | Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding protein-... 56 4e-08
AT2G37510.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 55 7e-08
AT3G56860.5 | Symbols: UBA2A | UBP1-associated protein 2A | chr3... 55 8e-08
AT3G56860.4 | Symbols: UBA2A | UBP1-associated protein 2A | chr3... 55 8e-08
AT3G56860.2 | Symbols: UBA2A | UBP1-associated protein 2A | chr3... 55 8e-08
AT3G56860.1 | Symbols: UBA2A | UBP1-associated protein 2A | chr3... 55 8e-08
AT3G56860.3 | Symbols: UBA2A | UBP1-associated protein 2A | chr3... 55 8e-08
AT4G19610.1 | Symbols: | nucleotide binding;nucleic acid bindin... 55 8e-08
AT5G53680.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 1e-07
AT2G16940.2 | Symbols: | Splicing factor, CC1-like | chr2:73428... 54 1e-07
AT5G19030.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 1e-07
AT1G78260.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 1e-07
AT2G16940.1 | Symbols: | Splicing factor, CC1-like | chr2:73428... 54 1e-07
AT1G07350.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 1e-07
AT1G33470.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 2e-07
AT1G33470.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 2e-07
AT2G46780.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 2e-07
AT1G78260.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 3e-07
AT3G04500.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 4e-07
AT1G07350.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 4e-07
AT5G04600.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 5e-07
AT1G20880.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 6e-07
AT1G20880.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 6e-07
AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-... 52 6e-07
AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-... 52 6e-07
AT5G54580.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 51 8e-07
AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-... 51 8e-07
AT5G64200.2 | Symbols: ATSC35, SC35, At-SC35 | ortholog of human... 51 9e-07
AT5G64200.1 | Symbols: ATSC35, SC35, At-SC35 | ortholog of human... 51 9e-07
AT3G06970.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 51 1e-06
AT1G22910.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 51 1e-06
AT1G22910.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 50 1e-06
AT1G22910.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 50 1e-06
AT4G02430.1 | Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RN... 50 2e-06
AT5G53720.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 50 2e-06
AT1G09140.1 | Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININE ... 50 2e-06
AT4G02430.2 | Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RN... 50 2e-06
AT5G52040.2 | Symbols: ATRSP41, RS41, At-RS41 | RNA-binding (RRM... 50 2e-06
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT5G52040.1 | Symbols: ATRSP41, RS41, At-RS41 | RNA-binding (RRM... 50 2e-06
AT1G09140.2 | Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININE ... 50 2e-06
AT1G58470.1 | Symbols: ATRBP1, RBP1 | RNA-binding protein 1 | ch... 50 2e-06
AT2G19380.1 | Symbols: | RNA recognition motif (RRM)-containing... 49 3e-06
AT5G07290.1 | Symbols: AML4, ML4 | MEI2-like 4 | chr5:2294248-22... 49 6e-06
AT2G16940.3 | Symbols: | Splicing factor, CC1-like | chr2:73428... 49 6e-06
AT1G73530.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 48 7e-06
AT4G35785.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 48 7e-06
>AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RNA
binding protein | chr4:12766223-12767952 REVERSE
LENGTH=329
Length = 329
Score = 305 bits (780), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/269 (60%), Positives = 186/269 (69%), Gaps = 12/269 (4%)
Query: 53 ALSLAATTHHRSSAPL-FVAQTSDWAQQ---------EEDNTLTLEDQEEGAEGVSETEA 102
+LSL TH + S + FVAQTSDWA++ E +N+L +D EG E +
Sbjct: 60 SLSLKTKTHLKKSPFVSFVAQTSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDASE 119
Query: 103 GWEPNXXXXXXXXXXXXXXXXXXXXXXXXXAKLFVGNLPYDADGHKLAELFNQVGTVDLA 162
G AKLFVGNL YD + LA LF Q GTV++A
Sbjct: 120 GDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIA 179
Query: 163 EVIYNRETDQSRGFGFVTMKTVEDAEKAVDKLNGYDFGGRLLTVNKAAPRGSRPERAPRS 222
EVIYNRETDQSRGFGFVTM +V++AE AV+K N YD GRLLTVNKAAPRGSRPERAPR
Sbjct: 180 EVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRV 239
Query: 223 FDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAE 282
+ +PAFRVYVGNLPWD DN +LEQ+FSEHGKVV ARVVYDRETGRSRGFGFVTMSD E
Sbjct: 240 Y--EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDE 297
Query: 283 LNDAIAALDGQSLGGRTIRVNVAEDRPRR 311
LN+AI+ALDGQ+L GR IRVNVAE+RP R
Sbjct: 298 LNEAISALDGQNLEGRAIRVNVAEERPPR 326
>AT5G50250.1 | Symbols: CP31B | chloroplast RNA-binding protein 31B
| chr5:20452677-20453965 REVERSE LENGTH=289
Length = 289
Score = 293 bits (751), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 208/315 (66%), Gaps = 50/315 (15%)
Query: 8 SLTTMAESCLLSAPSSLFYNKTK-HLF-FSAPSRPLKLQLSSINPSPALSLAATTHHRSS 65
++T + S L PS + ++ H F FS SRP+ L LSL + T R+S
Sbjct: 14 AMTNSSSSTLFCIPSIFNISSSESHRFNFSLSSRPVNL---------TLSLKSKTL-RNS 63
Query: 66 APL--FVAQTSDWAQQEED-------NTLTLEDQEEGAEGVSETEAGWEPNXXXXXXXXX 116
+P+ FV+QTS+WA++EE ++T+++ E +GV E E
Sbjct: 64 SPVVTFVSQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEE----------- 112
Query: 117 XXXXXXXXXXXXXXXXAKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGF 176
AKLFVGNLPYD D LA LF Q GTV+++EVIYNR+TDQSRGF
Sbjct: 113 ----------------AKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGF 156
Query: 177 GFVTMKTVEDAEKAVDKLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNL 236
GFVTM TVE+AEKAV+K N ++ GR LTVN+AAPRGSRPER PR +DA AFR+YVGNL
Sbjct: 157 GFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPERQPRVYDA--AFRIYVGNL 214
Query: 237 PWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLG 296
PWD D+ +LE++FSEHGKVV ARVV DRETGRSRGFGFV MS+E E+N AIAALDGQ+L
Sbjct: 215 PWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLE 274
Query: 297 GRTIRVNVAEDRPRR 311
GR I+VNVAE+R RR
Sbjct: 275 GRAIKVNVAEERTRR 289
>AT2G37220.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:15634980-15636331 REVERSE LENGTH=289
Length = 289
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 120/195 (61%), Gaps = 17/195 (8%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLFVGNLP++ D +LA+LF G V++ EVIY++ T +SRGFGFVTM +V + E A +
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPE---RAPRSFDAQPAF--------------RVYVGNL 236
NGY+ GR L VN P R + R PRS RVYVGNL
Sbjct: 152 FNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNL 211
Query: 237 PWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLG 296
W D+ LE +FSE GKVV ARV+YDR++GRS+GFGFVT E+ +AI +LDG L
Sbjct: 212 SWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLD 271
Query: 297 GRTIRVNVAEDRPRR 311
GR IRV+ AE RP R
Sbjct: 272 GRQIRVSEAEARPPR 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 54/83 (65%)
Query: 229 FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA 288
+++VGNLP++ D++QL Q+F G V V+YD+ TGRSRGFGFVTMS +E+ A
Sbjct: 91 LKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQ 150
Query: 289 ALDGQSLGGRTIRVNVAEDRPRR 311
+G L GR +RVN P+R
Sbjct: 151 QFNGYELDGRPLRVNAGPPPPKR 173
>AT1G60000.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:22093678-22094540 REVERSE LENGTH=258
Length = 258
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KL+ GNLPY+ D LA++ +L EV+YNR+T QSRGF FVTM VED +D
Sbjct: 86 KLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDN 145
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHG 253
L+G ++ GR L VN A +P+ + +++VGNL W + L F E G
Sbjct: 146 LDGTEYLGRALKVNFA----DKPKPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECG 201
Query: 254 KVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDR 308
VV ARVV+D +TGRSRG+GFV S +AE+ A+ +LDG L GR IRVN+A+ +
Sbjct: 202 DVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNLAQGK 256
>AT3G52380.1 | Symbols: CP33, PDE322 | chloroplast RNA-binding
protein 33 | chr3:19421619-19422855 FORWARD LENGTH=329
Length = 329
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+L+VGNLPY +L+++F + GTV +++Y++ TD+SRGFGFVTM ++E+A++A+
Sbjct: 116 GRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQ 175
Query: 193 KLNGYDFGGRLLTVN-KAAPRGSRPERA-------PRSFDAQPAFRVYVGNLPWDFDNSQ 244
N GGR + VN PRG E RS+ P +VY GNL W+ +
Sbjct: 176 MFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSP-HKVYAGNLGWNLTSQG 234
Query: 245 LEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNV 304
L+ F + V+ A+V+Y+R TGRSRGFGF++ + A+A ++G + GR +R+N+
Sbjct: 235 LKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNL 294
Query: 305 AEDRPR 310
A +R +
Sbjct: 295 ASEREK 300
>AT3G52150.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:19342074-19343090 FORWARD LENGTH=253
Length = 253
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 104/178 (58%), Gaps = 7/178 (3%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
++++GN+P +L +L + G V+ +V+Y++ + +SR FGF TMK+VEDA V+K
Sbjct: 77 RVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEK 136
Query: 194 LNGYDFGGRLLTVN-KAAPRGSRPERAP-----RSFDAQPAFRVYVGNLPWDFDNSQLEQ 247
LNG GR + VN P S P+ + +F P ++VYVGNL LE
Sbjct: 137 LNGNTVEGREIKVNITEKPIASSPDLSVLQSEDSAFVDSP-YKVYVGNLAKTVTKEMLEN 195
Query: 248 VFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
+FSE GKVVSA+V T +S GFGFVT S E ++ AI AL+ L G+ IRVN A
Sbjct: 196 LFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA 253
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 217 ERAPRSFD--AQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGF 274
E P + D ++ A RVY+GN+P N QL ++ EHG V +V+YD+ +GRSR FGF
Sbjct: 62 EEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGF 121
Query: 275 VTMSDEAELNDAIAALDGQSLGGRTIRVNVAE 306
TM + N + L+G ++ GR I+VN+ E
Sbjct: 122 ATMKSVEDANAVVEKLNGNTVEGREIKVNITE 153
>AT3G52150.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:19342074-19343090 FORWARD LENGTH=253
Length = 253
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 104/178 (58%), Gaps = 7/178 (3%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
++++GN+P +L +L + G V+ +V+Y++ + +SR FGF TMK+VEDA V+K
Sbjct: 77 RVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEK 136
Query: 194 LNGYDFGGRLLTVN-KAAPRGSRPERAP-----RSFDAQPAFRVYVGNLPWDFDNSQLEQ 247
LNG GR + VN P S P+ + +F P ++VYVGNL LE
Sbjct: 137 LNGNTVEGREIKVNITEKPIASSPDLSVLQSEDSAFVDSP-YKVYVGNLAKTVTKEMLEN 195
Query: 248 VFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
+FSE GKVVSA+V T +S GFGFVT S E ++ AI AL+ L G+ IRVN A
Sbjct: 196 LFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA 253
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 217 ERAPRSFD--AQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGF 274
E P + D ++ A RVY+GN+P N QL ++ EHG V +V+YD+ +GRSR FGF
Sbjct: 62 EEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGF 121
Query: 275 VTMSDEAELNDAIAALDGQSLGGRTIRVNVAE 306
TM + N + L+G ++ GR I+VN+ E
Sbjct: 122 ATMKSVEDANAVVEKLNGNTVEGREIKVNITE 153
>AT2G35410.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:14898341-14899590 FORWARD LENGTH=308
Length = 308
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLFV NLP+ + ++ELF Q GTV+ E+I ++ ++RGF FVTM + E+A+ A+DK
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDK 154
Query: 194 LNGYDFGGRLLTVNKA----APRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVF 249
+ + GR+++V+ A P P P ++YV NL W ++ L ++F
Sbjct: 155 FDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAPGDTRHKLYVSNLAWKARSTHLRELF 214
Query: 250 SEHG-KVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTI 300
+ VSARVV+ GRS G+GFV+ + E +AI L+G+ + GR I
Sbjct: 215 TAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAITKLNGKEIMGRPI 266
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 196 GYDFGGRLLTV--------NKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQ 247
G D RL++V A S+ E+ + ++ +++V NLPW + + +
Sbjct: 54 GSDNSRRLVSVLCSVAEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISE 113
Query: 248 VFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
+F + G V + ++ ++ G++RGF FVTM+ E AI D + GR I V+ A
Sbjct: 114 LFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFA 170
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDL-AEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KL+V NL + A L ELF + A V++ +S G+GFV+ T E+AE A+
Sbjct: 195 KLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAIT 254
Query: 193 KLNGYDFGGRLLTV 206
KLNG + GR +T+
Sbjct: 255 KLNGKEIMGRPITL 268
>AT1G01080.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:45503-46789 REVERSE LENGTH=293
Length = 293
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 95/178 (53%), Gaps = 9/178 (5%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+L+V N+P D +L ++F GTV EV N +T +SRG G+VTM ++ A+ A+
Sbjct: 108 CELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAKIAIA 167
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPA--------FRVYVGNLPWDFDNSQ 244
L+G + GGR + V + R P ++ P +VYVGNLPW
Sbjct: 168 SLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDG 227
Query: 245 LEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
L FS+ G +VS RV++DR+TGR+R F F++ + E DA + +G GR I V
Sbjct: 228 LRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTS-GEERDAALSFNGTQYEGRRIIV 284
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 216 PERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFV 275
P + PR + +YV N+P +D +QL +F G V+S V + +TG SRG G+V
Sbjct: 101 PVKKPRPCE------LYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYV 154
Query: 276 TMSDEAELNDAIAALDGQSLGGRTIRVNVAED 307
TM AIA+LDG +GGR +RV + D
Sbjct: 155 TMGSINSAKIAIASLDGTEVGGREMRVRYSVD 186
>AT1G01080.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:45503-46789 REVERSE LENGTH=294
Length = 294
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVI-YNRETDQSRGFGFVTMKTVEDAEKAV 191
+L+V N+P D +L ++F GTV EV+ N +T +SRG G+VTM ++ A+ A+
Sbjct: 108 CELYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGYVTMGSINSAKIAI 167
Query: 192 DKLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPA--------FRVYVGNLPWDFDNS 243
L+G + GGR + V + R P ++ P +VYVGNLPW
Sbjct: 168 ASLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPD 227
Query: 244 QLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
L FS+ G +VS RV++DR+TGR+R F F++ + E DA + +G GR I V
Sbjct: 228 GLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTS-GEERDAALSFNGTQYEGRRIIV 285
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 216 PERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVV-YDRETGRSRGFGF 274
P + PR + +YV N+P +D +QL +F G V+S VV + +TG SRG G+
Sbjct: 101 PVKKPRPCE------LYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGY 154
Query: 275 VTMSDEAELNDAIAALDGQSLGGRTIRVNVAED 307
VTM AIA+LDG +GGR +RV + D
Sbjct: 155 VTMGSINSAKIAIASLDGTEVGGREMRVRYSVD 187
>AT3G53460.3 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=342
Length = 342
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 61/82 (74%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
R+YVGNL W D+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+S E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 290 LDGQSLGGRTIRVNVAEDRPRR 311
L+G L GR IRV+ AE RP R
Sbjct: 318 LNGADLDGRQIRVSEAEARPPR 339
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLFVGNL ++ D +LA+LF G V++ EVIY++ T +SRGFGFVTM T + E A +
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPE---RAPR 221
NGY+F GR L VN P R E R PR
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+L+VGNL + D L LFN+ G V A VIY+R++ +S+GFGFVT+ + ++ +KA++
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 194 LNGYDFGGRLLTVNKAAPRGSR 215
LNG D GR + V++A R R
Sbjct: 318 LNGADLDGRQIRVSEAEARPPR 339
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%)
Query: 227 PAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
P +++VGNL ++ D++QL Q+F G V V+YD+ TGRSRGFGFVTMS AE+ A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 287 IAALDGQSLGGRTIRVNVAEDRPRR 311
+G GR +RVN P+R
Sbjct: 157 AQQFNGYEFEGRPLRVNAGPPPPKR 181
>AT3G53460.2 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=342
Length = 342
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 61/82 (74%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
R+YVGNL W D+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+S E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 290 LDGQSLGGRTIRVNVAEDRPRR 311
L+G L GR IRV+ AE RP R
Sbjct: 318 LNGADLDGRQIRVSEAEARPPR 339
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLFVGNL ++ D +LA+LF G V++ EVIY++ T +SRGFGFVTM T + E A +
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPE---RAPR 221
NGY+F GR L VN P R E R PR
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+L+VGNL + D L LFN+ G V A VIY+R++ +S+GFGFVT+ + ++ +KA++
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 194 LNGYDFGGRLLTVNKAAPRGSR 215
LNG D GR + V++A R R
Sbjct: 318 LNGADLDGRQIRVSEAEARPPR 339
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%)
Query: 227 PAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
P +++VGNL ++ D++QL Q+F G V V+YD+ TGRSRGFGFVTMS AE+ A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 287 IAALDGQSLGGRTIRVNVAEDRPRR 311
+G GR +RVN P+R
Sbjct: 157 AQQFNGYEFEGRPLRVNAGPPPPKR 181
>AT3G53460.1 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=342
Length = 342
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 61/82 (74%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
R+YVGNL W D+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+S E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 290 LDGQSLGGRTIRVNVAEDRPRR 311
L+G L GR IRV+ AE RP R
Sbjct: 318 LNGADLDGRQIRVSEAEARPPR 339
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLFVGNL ++ D +LA+LF G V++ EVIY++ T +SRGFGFVTM T + E A +
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPE---RAPR 221
NGY+F GR L VN P R E R PR
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+L+VGNL + D L LFN+ G V A VIY+R++ +S+GFGFVT+ + ++ +KA++
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 194 LNGYDFGGRLLTVNKAAPRGSR 215
LNG D GR + V++A R R
Sbjct: 318 LNGADLDGRQIRVSEAEARPPR 339
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%)
Query: 227 PAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
P +++VGNL ++ D++QL Q+F G V V+YD+ TGRSRGFGFVTMS AE+ A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 287 IAALDGQSLGGRTIRVNVAEDRPRR 311
+G GR +RVN P+R
Sbjct: 157 AQQFNGYEFEGRPLRVNAGPPPPKR 181
>AT3G53460.4 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=363
Length = 363
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 61/82 (74%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
R+YVGNL W D+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+S E+ AI +
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338
Query: 290 LDGQSLGGRTIRVNVAEDRPRR 311
L+G L GR IRV+ AE RP R
Sbjct: 339 LNGADLDGRQIRVSEAEARPPR 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+L+VGNL + D L LFN+ G V A VIY+R++ +S+GFGFVT+ + ++ +KA++
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338
Query: 194 LNGYDFGGRLLTVNKAAPRGSR 215
LNG D GR + V++A R R
Sbjct: 339 LNGADLDGRQIRVSEAEARPPR 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 58/112 (51%), Gaps = 24/112 (21%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLFVGNL ++ D +LA+LF G V++ EVIY++ T +SRGFGFVTM T + E A +
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 194 LNGY---------------------DFGGRLLTVNKAAPRGSRPE---RAPR 221
NGY +F GR L VN P R E R PR
Sbjct: 160 FNGYVSRYLCSLLCLYLLIRVLCGLEFEGRPLRVNAGPPPPKREESFSRGPR 211
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 21/106 (19%)
Query: 227 PAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMS-------- 278
P +++VGNL ++ D++QL Q+F G V V+YD+ TGRSRGFGFVTMS
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 279 -------------DEAELNDAIAALDGQSLGGRTIRVNVAEDRPRR 311
L I L G GR +RVN P+R
Sbjct: 157 AQQFNGYVSRYLCSLLCLYLLIRVLCGLEFEGRPLRVNAGPPPPKR 202
>AT3G16380.1 | Symbols: PAB6 | poly(A) binding protein 6 |
chr3:5558676-5560993 REVERSE LENGTH=537
Length = 537
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 12/187 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++V NL L LF+Q GTV + V+ +SRGFGFV E+A+KA++ L
Sbjct: 204 VYVKNLIETVTDDCLHTLFSQYGTVS-SVVVMRDGMGRSRGFGFVNFCNPENAKKAMESL 262
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFD----AQPAFR---VYVGNLPWDFDNSQLEQ 247
G G + L V KA + R E + F A+P R +YV NL + ++L +
Sbjct: 263 CGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMRWSNLYVKNLSESMNETRLRE 322
Query: 248 VFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA-- 305
+F +G++VSA+V+ E GRS+GFGFV S+ E A L+G + G+ I V VA
Sbjct: 323 IFGCYGQIVSAKVMC-HENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVAER 381
Query: 306 -EDRPRR 311
EDR +R
Sbjct: 382 KEDRIKR 388
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
A L+V NL L +F G++ +V+ E QS+GFGFV T + A A
Sbjct: 112 ANLYVKNLDSSITSSCLERMFCPFGSILSCKVV--EENGQSKGFGFVQFDTEQSAVSARS 169
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
L+G G+ L V K + R A Q + VYV NL + L +FS++
Sbjct: 170 ALHGSMVYGKKLFVAKFINKDERAAMA----GNQDSTNVYVKNLIETVTDDCLHTLFSQY 225
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRPRR 311
G V S V+ D GRSRGFGFV + A+ +L G LG + + V A + R
Sbjct: 226 GTVSSVVVMRD-GMGRSRGFGFVNFCNPENAKKAMESLCGLQLGSKKLFVGKALKKDER 283
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+VG+L D L + F+ V + N T +S + ++ + A A+ +L
Sbjct: 23 LYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTRL 82
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
N D G+ + + S+ + A R +YV NL +S LE++F G
Sbjct: 83 NHSDLKGKAMRI-----MWSQRDLAYRRRTRTGFANLYVKNLDSSITSSCLERMFCPFGS 137
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
++S +VV E G+S+GFGFV E A +AL G + G+ + V
Sbjct: 138 ILSCKVV--EENGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKLFV 183
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+ L+V NL + +L E+F G + A+V+ + E +S+GFGFV E++++A
Sbjct: 304 SNLYVKNLSESMNETRLREIFGCYGQIVSAKVMCH-ENGRSKGFGFVCFSNCEESKQAKR 362
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQP 227
LNG+ G+ + V A + R +R + F AQP
Sbjct: 363 YLNGFLVDGKPIVVRVAERKEDRIKRLQQYFQAQP 397
>AT1G22760.1 | Symbols: PAB3 | poly(A) binding protein 3 |
chr1:8055599-8058799 FORWARD LENGTH=660
Length = 660
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 102/185 (55%), Gaps = 10/185 (5%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++V NLP + +L + F + G + A V+ ++ SR FGFV + E A AV+K+
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSA-VVMRDQSGNSRCFGFVNFECTEAAASAVEKM 289
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR--------VYVGNLPWDFDNSQLE 246
NG G +L V +A + R E R F+ + R +Y+ NL D+ +L+
Sbjct: 290 NGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLK 349
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAE 306
++FSE+G V S++V+ + + G SRGFGFV S+ E A++ ++G+ +G + + + +A+
Sbjct: 350 EMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQ 408
Query: 307 DRPRR 311
+ R
Sbjct: 409 RKEDR 413
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F+ NL D L E F+ GT+ +V + T +S+G+GFV + E A+ A+DKL
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKL 196
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAF-RVYVGNLPWDFDNSQLEQVFSEHG 253
NG + + V R ERA P F VYV NLP + +L + F + G
Sbjct: 197 NGMLMNDKQVFVGHFI---RRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFG 253
Query: 254 KVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRPRR 311
V+S+ VV ++G SR FGFV A+ ++G SLG + V A+ + R
Sbjct: 254 -VISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSER 310
>AT3G23830.2 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding
protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136
Length = 136
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
+++VG L W D+S L+Q F+ G+V A V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 290 LDGQSLGGRTIRVNVAEDR---PRRSF 313
+DG+ L GR IRVN+A +R PR SF
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+KLFVG L + D L + F G V A VI +RET +SRGFGFV+ + A A+
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRP 216
+++G + GR + VN A R S P
Sbjct: 95 EMDGKELNGRQIRVNLATERSSAP 118
>AT3G23830.1 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding
protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136
Length = 136
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
+++VG L W D+S L+Q F+ G+V A V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 290 LDGQSLGGRTIRVNVAEDR---PRRSF 313
+DG+ L GR IRVN+A +R PR SF
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+KLFVG L + D L + F G V A VI +RET +SRGFGFV+ + A A+
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRP 216
+++G + GR + VN A R S P
Sbjct: 95 EMDGKELNGRQIRVNLATERSSAP 118
>AT5G19350.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:6518978-6521295 FORWARD LENGTH=425
Length = 425
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++G+L Y D + L F+Q G + +VI N+ T Q G+GF+ + AE+ +
Sbjct: 26 LWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTY 85
Query: 195 NGYDFGGRLLTVN-KAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH- 252
NG G LT A GS + DA P ++VG+L D + L++ F H
Sbjct: 86 NGTQMPGTELTFRLNWASFGSG-----QKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHY 140
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDR 308
V A+VV D TGRS+G+GFV ++E+E N A+A ++G R +R++ A +
Sbjct: 141 SSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPK 196
>AT5G19350.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:6518978-6521295 FORWARD LENGTH=421
Length = 421
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++G+L Y D + L F+Q G + +VI N+ T Q G+GF+ + AE+ +
Sbjct: 26 LWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTY 85
Query: 195 NGYDFGGRLLTVN-KAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH- 252
NG G LT A GS + DA P ++VG+L D + L++ F H
Sbjct: 86 NGTQMPGTELTFRLNWASFGSG-----QKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHY 140
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDR 308
V A+VV D TGRS+G+GFV ++E+E N A+A ++G R +R++ A +
Sbjct: 141 SSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPK 196
>AT1G71770.2 | Symbols: PAB5 | poly(A)-binding protein 5 |
chr1:26990777-26993489 REVERSE LENGTH=682
Length = 682
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++V NLP + +L + F + G + A V+ ++ SR FGFV + E A AV+K+
Sbjct: 241 VYVKNLPKEITDDELKKTFGKYGDISSA-VVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 299
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR--------VYVGNLPWDFDNSQLE 246
NG G +L V +A + R E R F+ + R +Y+ NL ++ +L+
Sbjct: 300 NGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLK 359
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAE 306
++FSE+G V S +V+ + + G SRGFGFV S+ E A+ ++G+ +G + + V +A+
Sbjct: 360 EMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQ 418
Query: 307 DRPRR 311
+ R
Sbjct: 419 RKEER 423
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 94/186 (50%), Gaps = 12/186 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F+ NL D L E F+ GT+ +V + +S+G+GFV + E A+ A+DKL
Sbjct: 148 VFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKL 206
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAF-RVYVGNLPWDFDNSQLEQVFSEHG 253
NG + + V R +RA A P+F VYV NLP + + +L++ F ++G
Sbjct: 207 NGMLLNDKQVFVGHFV---RRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYG 263
Query: 254 KVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLG------GRTIRVNVAED 307
+ SA V+ D ++G SR FGFV A+ ++G SLG GR + + E+
Sbjct: 264 DISSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREE 322
Query: 308 RPRRSF 313
RR F
Sbjct: 323 ELRRKF 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+ L+VG+L + L +LFNQV V V + T +S G+ +V EDA +A++
Sbjct: 59 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAME 117
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR------VYVGNLPWDFDNSQLE 246
LN AP RP R S + P+ R V++ NL DN L
Sbjct: 118 SLN-------------YAPIRDRPIRIMLS-NRDPSTRLSGKGNVFIKNLDASIDNKALY 163
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
+ FS G ++S +V D GRS+G+GFV E AI L+G L + + V
Sbjct: 164 ETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFV 218
>AT1G71770.1 | Symbols: PAB5 | poly(A)-binding protein 5 |
chr1:26990777-26993489 REVERSE LENGTH=682
Length = 682
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++V NLP + +L + F + G + A V+ ++ SR FGFV + E A AV+K+
Sbjct: 241 VYVKNLPKEITDDELKKTFGKYGDISSA-VVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 299
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR--------VYVGNLPWDFDNSQLE 246
NG G +L V +A + R E R F+ + R +Y+ NL ++ +L+
Sbjct: 300 NGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLK 359
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAE 306
++FSE+G V S +V+ + + G SRGFGFV S+ E A+ ++G+ +G + + V +A+
Sbjct: 360 EMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQ 418
Query: 307 DRPRR 311
+ R
Sbjct: 419 RKEER 423
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 94/186 (50%), Gaps = 12/186 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F+ NL D L E F+ GT+ +V + +S+G+GFV + E A+ A+DKL
Sbjct: 148 VFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKL 206
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAF-RVYVGNLPWDFDNSQLEQVFSEHG 253
NG + + V R +RA A P+F VYV NLP + + +L++ F ++G
Sbjct: 207 NGMLLNDKQVFVGHFV---RRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYG 263
Query: 254 KVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLG------GRTIRVNVAED 307
+ SA V+ D ++G SR FGFV A+ ++G SLG GR + + E+
Sbjct: 264 DISSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREE 322
Query: 308 RPRRSF 313
RR F
Sbjct: 323 ELRRKF 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+ L+VG+L + L +LFNQV V V + T +S G+ +V EDA +A++
Sbjct: 59 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAME 117
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR------VYVGNLPWDFDNSQLE 246
LN AP RP R S + P+ R V++ NL DN L
Sbjct: 118 SLN-------------YAPIRDRPIRIMLS-NRDPSTRLSGKGNVFIKNLDASIDNKALY 163
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
+ FS G ++S +V D GRS+G+GFV E AI L+G L + + V
Sbjct: 164 ETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFV 218
>AT4G13850.3 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
| chr4:8021314-8022065 FORWARD LENGTH=144
Length = 144
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G L W D++ L F+ G VV A+V+ DRETGRSRGFGFV +DE AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 290 LDGQSLGGRTIRVNVAEDRP 309
+DG+ L GR IRVN A DRP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLF+G L + D L + F G V A+VI +RET +SRGFGFV A A+ +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPE 217
++G + GR + VN A R S P
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPR 119
>AT4G13850.2 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
| chr4:8021314-8022065 FORWARD LENGTH=153
Length = 153
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G L W D++ L F+ G VV A+V+ DRETGRSRGFGFV +DE AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 290 LDGQSLGGRTIRVNVAEDRP 309
+DG+ L GR IRVN A DRP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLF+G L + D L + F G V A+VI +RET +SRGFGFV A A+ +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPE 217
++G + GR + VN A R S P
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPR 119
>AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | glycine-rich
RNA-binding protein 2 | chr4:8021314-8022065 FORWARD
LENGTH=158
Length = 158
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G L W D++ L F+ G VV A+V+ DRETGRSRGFGFV +DE AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 290 LDGQSLGGRTIRVNVAEDRP 309
+DG+ L GR IRVN A DRP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLF+G L + D L + F G V A+VI +RET +SRGFGFV A A+ +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPE 217
++G + GR + VN A R S P
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPR 119
>AT4G13850.4 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
| chr4:8021314-8022065 FORWARD LENGTH=129
Length = 129
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G L W D++ L F+ G VV A+V+ DRETGRSRGFGFV +DE AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 290 LDGQSLGGRTIRVNVAEDRP 309
+DG+ L GR IRVN A DRP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLF+G L + D L + F G V A+VI +RET +SRGFGFV A A+ +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 194 LNGYDFGGRLLTVNKAAPR 212
++G + GR + VN A R
Sbjct: 96 MDGKELNGRHIRVNPANDR 114
>AT2G21660.2 | Symbols: ATGRP7, CCR2 | cold, circadian rhythm, and
rna binding 2 | chr2:9265477-9266316 REVERSE LENGTH=159
Length = 159
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%)
Query: 229 FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA 288
+R +VG L W D+ LE F+++G V+ ++++ DRETGRSRGFGFVT DE + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 289 ALDGQSLGGRTIRVNVAE 306
++GQ L GR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+ FVG L + D L F Q G V +++I +RET +SRGFGFVT K + + A++
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 194 LNGYDFGGRLLTVNKA 209
+NG D GR +TVN+A
Sbjct: 69 MNGQDLDGRSITVNEA 84
>AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold,
circadian rhythm, and rna binding 2 |
chr2:9265477-9266316 REVERSE LENGTH=176
Length = 176
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%)
Query: 229 FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA 288
+R +VG L W D+ LE F+++G V+ ++++ DRETGRSRGFGFVT DE + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 289 ALDGQSLGGRTIRVNVAE 306
++GQ L GR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+ FVG L + D L F Q G V +++I +RET +SRGFGFVT K + + A++
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 194 LNGYDFGGRLLTVNKA 209
+NG D GR +TVN+A
Sbjct: 69 MNGQDLDGRSITVNEA 84
>AT1G34140.1 | Symbols: PAB1 | poly(A) binding protein 1 |
chr1:12433356-12434735 REVERSE LENGTH=407
Length = 407
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 11/183 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++V NL A L LF + G + A V+ + E +SR FGFV + E A A++K+
Sbjct: 121 VYVKNLVETATDADLKRLFGEFGEITSAVVMKDGE-GKSRRFGFVNFEKAEAAVTAIEKM 179
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR---------VYVGNLPWDFDNSQL 245
NG + L V +A + +R E F+ + R +YV NL DN++L
Sbjct: 180 NGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKL 239
Query: 246 EQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
E++FSE G + S +V+ G S+G GFV S E + A+ ++G+ +G + I V++A
Sbjct: 240 EELFSEFGTITSCKVMV-HSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLA 298
Query: 306 EDR 308
+ +
Sbjct: 299 QCK 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+FV NL D +L ++F+ G V L+ + + S+G+GFV + A +
Sbjct: 33 VFVKNLDESIDNKQLCDMFSAFGKV-LSCKVARDASGVSKGYGFVQFYSDLSVYTACNFH 91
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAF-RVYVGNLPWDFDNSQLEQVFSEHG 253
NG + + V RG +D F VYV NL ++ L+++F E G
Sbjct: 92 NGTLIRNQHIHVCPFVSRGQ--------WDKSRVFTNVYVKNLVETATDADLKRLFGEFG 143
Query: 254 KVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRPRRS 312
++ SA V+ D E G+SR FGFV AI ++G + + + V A+ + R+
Sbjct: 144 EITSAVVMKDGE-GKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNRT 201
>AT3G14100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:4673027-4675950 FORWARD LENGTH=427
Length = 427
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++VGN+ L E+F G V+ +++I D+S +GFV A A+ L
Sbjct: 61 VYVGNIHTQVTEPLLQEIFTSTGPVESSKLI---RKDKS-SYGFVHYFDRRSAALAILSL 116
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
NG G+ + VN A G R D F ++VG+L + ++ L Q FS
Sbjct: 117 NGRHLFGQPIKVNWAYATGQRE-------DTSSHFNIFVGDLSPEVTDATLYQSFSVFSS 169
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
ARV++D++TGRSRGFGFV+ ++ + AI ++G+ L R IR N A
Sbjct: 170 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWA 220
>AT5G61030.1 | Symbols: GR-RBP3 | glycine-rich RNA-binding protein 3
| chr5:24560870-24562152 FORWARD LENGTH=309
Length = 309
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G + + D L + F+++G+VV RV+ DRETGRSRGFGFVT + + AI A
Sbjct: 41 KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100
Query: 290 LDGQSLGGRTIRVNVAEDR 308
LDG+ L GR ++VN A DR
Sbjct: 101 LDGRDLHGRVVKVNYANDR 119
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+KLF+G + Y D L E F + G V VI +RET +SRGFGFVT + E A A+
Sbjct: 40 SKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQ 99
Query: 193 KLNGYDFGGRLLTVNKAAPR 212
L+G D GR++ VN A R
Sbjct: 100 ALDGRDLHGRVVKVNYANDR 119
>AT2G36660.1 | Symbols: PAB7 | poly(A) binding protein 7 |
chr2:15361476-15364398 REVERSE LENGTH=609
Length = 609
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 10/187 (5%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++ NL D L E F + G + ++ I E RG+ FV EDA +A + +
Sbjct: 203 LYMKNLDADVSEDLLREKFAEFGKI-VSLAIAKDENRLCRGYAFVNFDNPEDARRAAETV 261
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQ--------PAFRVYVGNLPWDFDNSQLE 246
NG FG + L V +A + R + F + +YV N+ +L
Sbjct: 262 NGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELR 321
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAE 306
+ FS+ G + S +++ D E G+S+GFGFV S E DA+ GQ G+ + V +A+
Sbjct: 322 KHFSQCGTITSTKLMCD-EKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQ 380
Query: 307 DRPRRSF 313
+ R
Sbjct: 381 KKEDRKM 387
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 12/179 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+FV NLP L ++F + G + +V E +SRG+GFV + + A A+ L
Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAIQTL 172
Query: 195 NGYDFGGRLLTVNKAAPRGSR--PERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
N + + V K + R PE + +Y+ NL D L + F+E
Sbjct: 173 NSTIVADKEIYVGKFMKKTDRVKPE--------EKYTNLYMKNLDADVSEDLLREKFAEF 224
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRPRR 311
GK+VS + D E RG+ FV + + A ++G G + + V A+ + R
Sbjct: 225 GKIVSLAIAKD-ENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAER 282
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
A L+VG+L L + F + ++ + + + +S +G+ + +DA A++
Sbjct: 24 ASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIE 83
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQP--AFRVYVGNLPWDFDNSQLEQVFS 250
K N G+++ V + RAP DA+ V+V NLP N+ L+ +F
Sbjct: 84 KKNNSLLNGKMIRVMWSV-------RAP---DARRNGVGNVFVKNLPESVTNAVLQDMFK 133
Query: 251 EHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
+ G +VS +V E G+SRG+GFV E + AI L+ + + I V
Sbjct: 134 KFGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYV 184
>AT1G17640.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:6067394-6069098 REVERSE LENGTH=369
Length = 369
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLFVG + ++ A F + G V + ++ +R T RGFGFVT AEK ++
Sbjct: 66 GKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLE 125
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
+ + D R + + + PRG + +++VG LP + +L+ F +
Sbjct: 126 EDHVID--DRKVDLKRTLPRGDKDTDIKA---VSKTRKIFVGGLPPLLEEDELKNYFCVY 180
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRPRRS 312
G ++ +++YD TGRSRGFGFVT E ++ + LG + + + AE P+R+
Sbjct: 181 GDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAE--PKRT 238
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FVG LP + +L F G + +++Y+ T +SRGFGFVT +T + ++
Sbjct: 158 KIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSD 217
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAF 229
++ G + + + +A P+ + + + RS+ A +
Sbjct: 218 GKVHELGDKQVEIKRAEPKRTGRDNSFRSYGASGKY 253
>AT3G19130.1 | Symbols: ATRBP47B, RBP47B | RNA-binding protein 47B |
chr3:6611398-6613823 REVERSE LENGTH=435
Length = 435
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+VG+L + D L F+ G V +VI N+ T QS G+GFV + AE+ +
Sbjct: 110 LWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNY 169
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERA---------PRSFDAQPAFRVYVGNLPWDFDNSQL 245
+G P +P R R+ + P V+VG+L D + L
Sbjct: 170 SG-----------SVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLL 218
Query: 246 EQVFSE-HGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNV 304
+ FS+ + V SA+VV D TGRS+G+GFV DE E + A+ ++G R +RV +
Sbjct: 219 HETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGI 278
Query: 305 AEDRPRRSF 313
A P+R+
Sbjct: 279 AT--PKRAI 285
>AT1G17370.2 | Symbols: UBP1B | oligouridylate binding protein 1B |
chr1:5951842-5954825 REVERSE LENGTH=416
Length = 416
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++VGN+ L E+F G V+ ++I ++ +GFV A A+ L
Sbjct: 56 VYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSS----YGFVHYFDRRSAGLAILSL 111
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
NG G+ + VN A G R D F ++VG+L + ++ L FS +
Sbjct: 112 NGRHLFGQPIKVNWAYASGQRE-------DTSSHFNIFVGDLSPEVTDAMLFTCFSVYPT 164
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
ARV++D++TGRSRGFGFV+ ++ + AI + G+ LG R IR N A
Sbjct: 165 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWA 215
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 29/193 (15%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+FVG+L + L F+ T A V+++++T +SRGFGFV+ + +DA+ A+D++
Sbjct: 141 IFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEI 200
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR-----------------------V 231
G G R + N A +G+ +S D++ V
Sbjct: 201 TGKWLGSRQIRCNWAT-KGATSGEDKQSSDSKSVVELTSGDGKDTTNGEAPENNAQYTTV 259
Query: 232 YVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALD 291
YVGNL + L + F G A V+ + R +GFGFV S E AI +
Sbjct: 260 YVGNLAPEVSQVDLHRHFHSLG----AGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGN 315
Query: 292 GQS-LGGRTIRVN 303
S L GR ++ +
Sbjct: 316 THSYLSGRQMKCS 328
>AT4G39260.2 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=126
Length = 126
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 56/82 (68%)
Query: 225 AQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELN 284
++ +R +VG L W ++ L++ FS+ G V+ ++++ DRE+GRSRGFGFVT DE +
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 285 DAIAALDGQSLGGRTIRVNVAE 306
DAI ++G+ L GR I VN A+
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQ 83
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+ FVG L + + L F+Q G V +++I +RE+ +SRGFGFVT K + A+++
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 194 LNGYDFGGRLLTVNKA 209
+NG + GR++TVN+A
Sbjct: 67 MNGKELDGRVITVNEA 82
>AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=169
Length = 169
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 56/82 (68%)
Query: 225 AQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELN 284
++ +R +VG L W ++ L++ FS+ G V+ ++++ DRE+GRSRGFGFVT DE +
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 285 DAIAALDGQSLGGRTIRVNVAE 306
DAI ++G+ L GR I VN A+
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQ 83
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+ FVG L + + L F+Q G V +++I +RE+ +SRGFGFVT K + A+++
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 194 LNGYDFGGRLLTVNKA 209
+NG + GR++TVN+A
Sbjct: 67 MNGKELDGRVITVNEA 82
>AT4G39260.3 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=92
Length = 92
Score = 84.3 bits (207), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 55/80 (68%)
Query: 229 FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA 288
+R +VG L W ++ L++ FS+ G V+ ++++ DRE+GRSRGFGFVT DE + DAI
Sbjct: 6 YRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIE 65
Query: 289 ALDGQSLGGRTIRVNVAEDR 308
++G+ L GR I VN A+ R
Sbjct: 66 EMNGKELDGRVITVNEAQSR 85
Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+ FVG L + + L F+Q G V +++I +RE+ +SRGFGFVT K + A+++
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 194 LNGYDFGGRLLTVNKAAPRGS 214
+NG + GR++TVN+A RGS
Sbjct: 67 MNGKELDGRVITVNEAQSRGS 87
>AT1G17370.1 | Symbols: UBP1B | oligouridylate binding protein 1B |
chr1:5951842-5954825 REVERSE LENGTH=419
Length = 419
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++VGN+ L E+F G V+ ++I ++ +GFV A A+ L
Sbjct: 56 VYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSS----YGFVHYFDRRSAGLAILSL 111
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
NG G+ + VN A G R D F ++VG+L + ++ L FS +
Sbjct: 112 NGRHLFGQPIKVNWAYASGQRE-------DTSSHFNIFVGDLSPEVTDAMLFTCFSVYPT 164
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
ARV++D++TGRSRGFGFV+ ++ + AI + G+ LG R IR N A
Sbjct: 165 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWA 215
>AT5G40490.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:16225483-16227423 FORWARD LENGTH=423
Length = 423
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
K+FVG L + + + F + G + + ++ +R+T Q RGFGFVT +K +
Sbjct: 42 GKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQ 101
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
+ + G+ + + + PRGS + F + +++VG +P D+ + ++ F +
Sbjct: 102 --DNHIIIGKQVEIKRTIPRGSM---SSNDFKTK---KIFVGGIPSSVDDDEFKEFFMQF 153
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAE 306
G++ +++ D TGRSRGFGFVT E ++ +A + L G + + AE
Sbjct: 154 GELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAE 207
>AT2G18510.1 | Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs)
family protein | chr2:8031554-8033517 REVERSE LENGTH=363
Length = 363
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
A ++VG L L ELF Q G V V +R T+ + +GF+ ++ EDA+ A+
Sbjct: 25 ATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIK 84
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
LN G+ + VNKA+ + +S D +++GNL D D L FS
Sbjct: 85 VLNMIKLHGKPIRVNKAS-------QDKKSLDV--GANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 253 GKVVS-ARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDR 308
G + S +++ D +TG SRGFGF++ + AI ++ GQ L R I V+ A +
Sbjct: 136 GVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLSNRQITVSYAYKK 192
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTV-DLAEVIYNRETDQSRGFGFVTMKTVEDAEKAV 191
A LF+GNL D D L + F+ G + +++ + +T SRGFGF++ + E ++ A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 192 DKLNGYDFGGRLLTVNKAAPRGSRPER 218
+ + G R +TV+ A + ++ ER
Sbjct: 172 ESMTGQYLSNRQITVSYAYKKDTKGER 198
>AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/RNP
motifs) family protein | chr1:3914895-3917301 FORWARD
LENGTH=306
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 10/178 (5%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++G+L Y D + L F G + A+VI N++T Q G+GF+ + AE+ +
Sbjct: 64 LWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTF 123
Query: 195 NGY---DFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVF-S 250
N F +L +N A+ S +R D P + ++VG+L D + L + F +
Sbjct: 124 NNAPIPSFPDQLFRLNWAS-LSSGDKR-----DDSPDYTIFVGDLAADVTDYILLETFRA 177
Query: 251 EHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDR 308
+ V A+VV DR TGR++G+GFV SDE+E A+ ++G R +R+ A +
Sbjct: 178 SYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASK 235
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 135 LFVGNLPYDADGHKLAELFN-QVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+FVG+L D + L E F +V A+V+ +R T +++G+GFV + +A+ +
Sbjct: 157 IFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTE 216
Query: 194 LNGYDFGGRLLTVNKAA-PRGSRPER-------APRSFDAQPA-FRVYVGNLPWDFDNSQ 244
+NG R + + AA +G +R A + D P V+VG L +
Sbjct: 217 MNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDH 276
Query: 245 LEQVFSEHGKVVSARVVYDRETG 267
L+ VFS++G++V ++ + G
Sbjct: 277 LKNVFSQYGEIVHVKIPAGKRCG 299
>AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/RNP
motifs) family protein | chr1:3914895-3917941 FORWARD
LENGTH=405
Length = 405
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 10/178 (5%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++G+L Y D + L F G + A+VI N++T Q G+GF+ + AE+ +
Sbjct: 64 LWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTF 123
Query: 195 NGY---DFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVF-S 250
N F +L +N A+ S +R D P + ++VG+L D + L + F +
Sbjct: 124 NNAPIPSFPDQLFRLNWAS-LSSGDKR-----DDSPDYTIFVGDLAADVTDYILLETFRA 177
Query: 251 EHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDR 308
+ V A+VV DR TGR++G+GFV SDE+E A+ ++G R +R+ A +
Sbjct: 178 SYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASK 235
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 135 LFVGNLPYDADGHKLAELFN-QVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+FVG+L D + L E F +V A+V+ +R T +++G+GFV + +A+ +
Sbjct: 157 IFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTE 216
Query: 194 LNGYDFGGRLLTVNKAA-PRGSRPER-------APRSFDAQPA-FRVYVGNLPWDFDNSQ 244
+NG R + + AA +G +R A + D P V+VG L +
Sbjct: 217 MNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDH 276
Query: 245 LEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVN 303
L+ VFS++G++V ++ + G FV S+++ +A+ L+G LGG T+R++
Sbjct: 277 LKNVFSQYGEIVHVKIPAGKRCG------FVQFSEKSCAEEALRMLNGVQLGGTTVRLS 329
>AT5G54900.1 | Symbols: ATRBP45A, RBP45A | RNA-binding protein 45A |
chr5:22295412-22298126 FORWARD LENGTH=387
Length = 387
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++G+L D + + +F Q G A+VI N+ T QS G+GF+ + AE+ +
Sbjct: 62 LWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTY 121
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSE-HG 253
NG T + E+ R P ++VG+L + + L F +G
Sbjct: 122 NGAPMPSTEQTFRLNWAQAGAGEK--RFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYG 179
Query: 254 KVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDR 308
V A+VV DR TGRS+G+GFV +DE E A+ ++GQ R +R+ A ++
Sbjct: 180 SVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANK 234
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 135 LFVGNLPYDADGHKLAELFNQV-GTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+FVG+L + + L++ F V G+V A+V+ +R T +S+G+GFV + +A+ +
Sbjct: 156 IFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTE 215
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPA---------FRVYVGNLPWDFDNSQ 244
+NG R + + AA + + P + + Q A ++VG L + + +
Sbjct: 216 MNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDE 275
Query: 245 LEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
L+ +F + G+++ ++ + GFV +++A A++ L+G LGG++IR+
Sbjct: 276 LKSIFGQFGELLHVKIPPGKRC------GFVQYANKASAEHALSVLNGTQLGGQSIRL 327
>AT4G36960.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:17427349-17429589 FORWARD LENGTH=379
Length = 379
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KL V +P+D D L + ++ G ++ V+ +R T +SRGFG+VT + EDA+ A
Sbjct: 4 KLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA--- 60
Query: 194 LNGYDF-GGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
L G F G R+L V A P+ R P A+ R++V +P S F +
Sbjct: 61 LKGEHFLGNRILEVKVATPK--EEMRQP----AKKVTRIFVARIPSSVSESDFRSHFERY 114
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA----EDR 308
G++ + D + + RG GF+T S + D + D LGG T+ V+ A +D
Sbjct: 115 GEITDLYMPKDYNSKQHRGIGFITFSSADSVEDLME--DTHDLGGTTVAVDRATPKEDDH 172
Query: 309 PRR 311
P R
Sbjct: 173 PPR 175
>AT4G36960.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:17427349-17429589 FORWARD LENGTH=379
Length = 379
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KL V +P+D D L + ++ G ++ V+ +R T +SRGFG+VT + EDA+ A
Sbjct: 4 KLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA--- 60
Query: 194 LNGYDF-GGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
L G F G R+L V A P+ R P A+ R++V +P S F +
Sbjct: 61 LKGEHFLGNRILEVKVATPK--EEMRQP----AKKVTRIFVARIPSSVSESDFRSHFERY 114
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA----EDR 308
G++ + D + + RG GF+T S + D + D LGG T+ V+ A +D
Sbjct: 115 GEITDLYMPKDYNSKQHRGIGFITFSSADSVEDLME--DTHDLGGTTVAVDRATPKEDDH 172
Query: 309 PRR 311
P R
Sbjct: 173 PPR 175
>AT4G26650.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:13445265-13447592 FORWARD LENGTH=452
Length = 452
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + +D D +L E F + G + A ++ +R T ++RGFGF+ AE+ +
Sbjct: 12 GKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI- 70
Query: 193 KLNGYDFGGRLLTVNKAAPRGSR--------------PERAPRSFDAQPAFRVYVGNLPW 238
++ + GR + KA PR + P A+ +++VG LP
Sbjct: 71 -MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTK-KIFVGGLPS 128
Query: 239 DFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGR 298
++ + F + G + V+YD T R RGFGF+T E + D + L G+
Sbjct: 129 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESV-DMVLHKTFHELNGK 187
Query: 299 TIRVNVA 305
+ V A
Sbjct: 188 MVEVKRA 194
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G + WD D +L++ F ++G +V A ++ DR TGR+RGFGF+ +D + I
Sbjct: 13 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI-- 70
Query: 290 LDGQSLGGRTIRVNVAEDR 308
+D + GRT+ A R
Sbjct: 71 MDKHIIDGRTVEAKKAVPR 89
>AT4G26650.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:13445552-13447592 FORWARD LENGTH=455
Length = 455
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + +D D +L E F + G + A ++ +R T ++RGFGF+ AE+ +
Sbjct: 15 GKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI- 73
Query: 193 KLNGYDFGGRLLTVNKAAPRGSR--------------PERAPRSFDAQPAFRVYVGNLPW 238
++ + GR + KA PR + P A+ +++VG LP
Sbjct: 74 -MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTK-KIFVGGLPS 131
Query: 239 DFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGR 298
++ + F + G + V+YD T R RGFGF+T E + D + L G+
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESV-DMVLHKTFHELNGK 190
Query: 299 TIRVNVA 305
+ V A
Sbjct: 191 MVEVKRA 197
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G + WD D +L++ F ++G +V A ++ DR TGR+RGFGF+ +D + I
Sbjct: 16 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI-- 73
Query: 290 LDGQSLGGRTIRVNVAEDR 308
+D + GRT+ A R
Sbjct: 74 MDKHIIDGRTVEAKKAVPR 92
>AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein 1A |
chr1:20183923-20186824 REVERSE LENGTH=426
Length = 426
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++ GN+ L E+F G ++ ++I D+S +GFV A A+ L
Sbjct: 65 VYAGNIHTQVTEILLQEIFASTGPIESCKLI---RKDKS-SYGFVHYFDRRCASMAIMTL 120
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
NG G+ + VN A G R D F ++VG+L + ++ L FS
Sbjct: 121 NGRHIFGQPMKVNWAYATGQRE-------DTSSHFNIFVGDLSPEVTDAALFDSFSAFNS 173
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
ARV++D++TGRSRGFGFV+ ++ + AI ++G+ + R IR N A
Sbjct: 174 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWA 224
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+FVG+L + L + F+ + A V+++++T +SRGFGFV+ + +DA+ A++++
Sbjct: 150 IFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 209
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQ-------------------------PAF 229
NG R + N A +G+ S D + P F
Sbjct: 210 NGKWVSSRQIRCNWAT-KGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQF 268
Query: 230 R-VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA 288
VYVGNL + L ++F G A V+ + R +GFGFV + E AI
Sbjct: 269 TTVYVGNLSPEVTQLDLHRLFYTLG----AGVIEEVRVQRDKGFGFVRYNTHDEAALAIQ 324
Query: 289 ALDGQS-LGGRTIRVN 303
+ Q L R IR +
Sbjct: 325 MGNAQPFLFSRQIRCS 340
>AT1G49600.1 | Symbols: ATRBP47A, RBP47A | RNA-binding protein 47A |
chr1:18357236-18360150 REVERSE LENGTH=445
Length = 445
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 23/188 (12%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+VG+L + D L F+ V +VI N++T QS G+GFV + AE+A+
Sbjct: 121 LWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSF 180
Query: 195 NGYDFGGRLLTVNKAAPRGSRPER---------APRSFDAQPAFRVYVGNLPWDFDNSQL 245
+G P +P R R+ + P ++VG+L D ++ L
Sbjct: 181 SGVTM-----------PNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVL 229
Query: 246 EQVFS-EHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNV 304
+ F+ + V A+VV D TGRS+G+GFV DE E + A+ ++G R +RV +
Sbjct: 230 LETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGI 289
Query: 305 AEDRPRRS 312
A P+R+
Sbjct: 290 AT--PKRA 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 24/186 (12%)
Query: 135 LFVGNLPYDADGHKLAELF-NQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+FVG+L D L E F + +V A+V+ + T +S+G+GFV + +A+ +
Sbjct: 215 IFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTE 274
Query: 194 LNGYDFGGRLLTVNKAAPR-----------------GSRPERAPRSFDAQPAFRVYVGNL 236
+NG R + V A P+ G S ++VG L
Sbjct: 275 MNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGL 334
Query: 237 PWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLG 296
D L Q FS+ G+VVS ++ +G GFV ++ +AI L+G +G
Sbjct: 335 DADVTEEDLMQPFSDFGEVVSVKIPV------GKGCGFVQFANRQSAEEAIGNLNGTVIG 388
Query: 297 GRTIRV 302
T+R+
Sbjct: 389 KNTVRL 394
>AT2G23350.1 | Symbols: PAB4, PABP4 | poly(A) binding protein 4 |
chr2:9943209-9946041 FORWARD LENGTH=662
Length = 662
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
L+VG+L ++ +L + F +V V V + T+ S G+G+V +DAEKA+
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQ 105
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
KLN G+++ + ++ S ++V NL DN L + FS
Sbjct: 106 KLNYSYLNGKMIRITYSSRDSSARRSG--------VGNLFVKNLDKSVDNKTLHEAFSGC 157
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
G +VS +V D G+SRG+GFV E +AI L+G+ L + I V
Sbjct: 158 GTIVSCKVATD-HMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFV 206
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 12/186 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETD-QSRGFGFVTMKTVEDAEKAVDK 193
++V NL +L F Q G++ A V+ R+ D +SR FGFV + EDA +AV+
Sbjct: 227 VYVKNLSEATTDDELKTTFGQYGSISSAVVM--RDGDGKSRCFGFVNFENPEDAARAVEA 284
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPA--------FRVYVGNLPWDFDNSQL 245
LNG F + V KA + R R ++ + +YV NL + +L
Sbjct: 285 LNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKL 344
Query: 246 EQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
++F+E G + S +V+ D +G S+G GFV S +E + + ++G+ +GG+ + V +A
Sbjct: 345 RELFAEFGTITSCKVMRD-PSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALA 403
Query: 306 EDRPRR 311
+ + R
Sbjct: 404 QRKEER 409
>AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding
protein 2 | chr4:16336732-16339892 FORWARD LENGTH=629
Length = 629
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+VG+L ++ +L + F Q+GTV V + T +S G+G+V +DA +A+ +L
Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
N G+ + V + R P S A +++ NL D+ L FS G
Sbjct: 98 NYIPLYGKPIRVMYS-------HRDP-SVRRSGAGNIFIKNLDESIDHKALHDTFSSFGN 149
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
+VS +V D +G+S+G+GFV ++E AI L+G L + + V
Sbjct: 150 IVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYV 196
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F+ NL D L + F+ G + +V + + QS+G+GFV E A+KA++KL
Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKL 184
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
NG + + V R R A ++ VYV NL + L+ F E+GK
Sbjct: 185 NGMLLNDKQVYVGPFLRRQERDSTANKT----KFTNVYVKNLAESTTDDDLKNAFGEYGK 240
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRPRR 311
+ SA V+ D E G+S+GFGFV + + A+ +L+G + V A+ + R
Sbjct: 241 ITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSER 296
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++V NL L F + G + A V+ + E +S+GFGFV + +DA +AV+ L
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESL 275
Query: 195 NGYDFGGRLLTVNKAAPRGSR--------PERAPRSFDAQPAFRVYVGNLPWDFDNSQLE 246
NG+ F + V +A + R + + D + +YV NL + +L+
Sbjct: 276 NGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLK 335
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAE 306
++FS G V S++V+ D G S+G GFV + E +A++ L G+ + + + V +A+
Sbjct: 336 EIFSPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQ 394
Query: 307 DRPRR 311
+ R
Sbjct: 395 RKEDR 399
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
+YVG+L ++ +SQL F + G VV+ RV D T RS G+G+V ++ + AI L
Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97
Query: 291 DGQSLGGRTIRVNVAEDRP--RRS 312
+ L G+ IRV + P RRS
Sbjct: 98 NYIPLYGKPIRVMYSHRDPSVRRS 121
>AT1G60650.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein with retrovirus zinc finger-like domain |
chr1:22340089-22342148 FORWARD LENGTH=292
Length = 292
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%)
Query: 221 RSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDE 280
R D R++VG L WD QLE F +GK+ +++ R+TGR RGFGF+T +D
Sbjct: 4 RENDGNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDR 63
Query: 281 AELNDAIAALDGQSLGGRTIRVNVAE 306
+DAI + G+ LG + I VN AE
Sbjct: 64 RGADDAIKHMHGRELGNKVISVNKAE 89
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+++FVG L +D +L F++ G + +++ R+T + RGFGF+T A+ A+
Sbjct: 12 SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIK 71
Query: 193 KLNGYDFGGRLLTVNKAAPR 212
++G + G ++++VNKA P+
Sbjct: 72 HMHGRELGNKVISVNKAEPK 91
>AT1G60650.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein with retrovirus zinc finger-like domain |
chr1:22340089-22342148 FORWARD LENGTH=292
Length = 292
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%)
Query: 221 RSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDE 280
R D R++VG L WD QLE F +GK+ +++ R+TGR RGFGF+T +D
Sbjct: 4 RENDGNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDR 63
Query: 281 AELNDAIAALDGQSLGGRTIRVNVAE 306
+DAI + G+ LG + I VN AE
Sbjct: 64 RGADDAIKHMHGRELGNKVISVNKAE 89
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+++FVG L +D +L F++ G + +++ R+T + RGFGF+T A+ A+
Sbjct: 12 SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIK 71
Query: 193 KLNGYDFGGRLLTVNKAAPR 212
++G + G ++++VNKA P+
Sbjct: 72 HMHGRELGNKVISVNKAEPK 91
>AT3G13224.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:4254848-4256014 FORWARD LENGTH=231
Length = 231
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 6/156 (3%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
K+F+G L D + F + G + + ++ +R T Q RGFGF+T +K ++
Sbjct: 19 GKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIE 78
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
+ + G+ + + + P+G+ ++ D + +++VG +P +L+ F+++
Sbjct: 79 --DTHVINGKQVEIKRTIPKGAGGNQSK---DIKTK-KIFVGGIPSTVTEDELKDFFAKY 132
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA 288
G VV +V+ D ET RSRGFGFV E +++ ++
Sbjct: 133 GNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLS 168
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 225 AQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELN 284
A P ++++G L D N+ + F ++G++ + ++ DR TG+ RGFGF+T +D + ++
Sbjct: 16 ASPG-KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVD 74
Query: 285 DAIAALDGQSLGGRTIRV 302
I D + G+ + +
Sbjct: 75 KVIE--DTHVINGKQVEI 90
>AT3G26420.1 | Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs)
family protein with retrovirus zinc finger-like domain |
chr3:9671953-9673055 FORWARD LENGTH=245
Length = 245
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%)
Query: 227 PAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
P +R ++G L W + L F ++G +V A+VV D+ +GRSRGFGF+T ++ +++A
Sbjct: 5 PEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEA 64
Query: 287 IAALDGQSLGGRTIRVNVAE 306
IAA++G L GRTI V+ A+
Sbjct: 65 IAAMNGMDLDGRTITVDKAQ 84
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+ F+G L + L + F + G + A+V+ ++ + +SRGFGF+T + ++A+
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 194 LNGYDFGGRLLTVNKAAP 211
+NG D GR +TV+KA P
Sbjct: 68 MNGMDLDGRTITVDKAQP 85
>AT1G74230.1 | Symbols: GR-RBP5 | glycine-rich RNA-binding protein 5
| chr1:27915346-27916857 FORWARD LENGTH=289
Length = 289
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
+++VG + + D L + FS++G+VV A+++ DRETGRSRGF FVT + E ++A+
Sbjct: 35 KIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAM-Q 93
Query: 290 LDGQSLGGRTIRVNVA 305
LDGQ L GR IRVN A
Sbjct: 94 LDGQDLHGRRIRVNYA 109
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+K+FVG + Y D L E F++ G V A++I +RET +SRGF FVT + E+A A+
Sbjct: 34 SKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAM- 92
Query: 193 KLNGYDFGGRLLTVNKA 209
+L+G D GR + VN A
Sbjct: 93 QLDGQDLHGRRIRVNYA 109
>AT3G07810.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:2492875-2495052 FORWARD LENGTH=494
Length = 494
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + +D + +L E F+ G V A ++ +R T ++RGFGFV AE +
Sbjct: 6 GKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVIT 65
Query: 193 KLNGYDFGGRLLTVNKAAPRGSR---PERAPRSFDAQPAF-----RVYVGNLPWDFDNSQ 244
+ + D GRL+ KA PR + S P +++VG LP S
Sbjct: 66 EKHNID--GRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123
Query: 245 LEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDE 280
+ F + G V+YD T R RGFGF+T E
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSE 159
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEA 281
++++G + WD + +L++ FS G+V+ A ++ DR TGR+RGFGFV +D A
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPA 58
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FVG LP F Q GT V+Y+ T + RGFGF+T + E EK + K
Sbjct: 109 KIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168
Query: 194 LNGYDFGGRLLTVNKAAPR--GSRPERAP 220
++ G+++ V +A P+ P R+P
Sbjct: 169 TF-HELNGKMVEVKRAVPKELSPGPSRSP 196
>AT3G07810.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:2492875-2495102 FORWARD LENGTH=495
Length = 495
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + +D + +L E F+ G V A ++ +R T ++RGFGFV AE +
Sbjct: 6 GKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVIT 65
Query: 193 KLNGYDFGGRLLTVNKAAPRGSR---PERAPRSFDAQPAF-----RVYVGNLPWDFDNSQ 244
+ + D GRL+ KA PR + S P +++VG LP S
Sbjct: 66 EKHNID--GRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123
Query: 245 LEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDE 280
+ F + G V+YD T R RGFGF+T E
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSE 159
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEA 281
++++G + WD + +L++ FS G+V+ A ++ DR TGR+RGFGFV +D A
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPA 58
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FVG LP F Q GT V+Y+ T + RGFGF+T + E EK + K
Sbjct: 109 KIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168
Query: 194 LNGYDFGGRLLTVNKAAPR--GSRPERAP 220
++ G+++ V +A P+ P R+P
Sbjct: 169 TF-HELNGKMVEVKRAVPKELSPGPSRSP 196
>AT3G13224.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:4254848-4256621 FORWARD LENGTH=358
Length = 358
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 8/181 (4%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
K+F+G L D + F + G + + ++ +R T Q RGFGF+T +K ++
Sbjct: 19 GKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIE 78
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
+ G+ + + + P+G+ +S D + +++VG +P +L+ F+++
Sbjct: 79 DT--HVINGKQVEIKRTIPKGAG---GNQSKDIKTK-KIFVGGIPSTVTEDELKDFFAKY 132
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRPRRS 312
G VV +V+ D ET RSRGFGFV E +++ ++ G + +V + + P++S
Sbjct: 133 GNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSK--GNMIDMADTQVEIKKAEPKKS 190
Query: 313 F 313
Sbjct: 191 L 191
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FVG +P +L + F + G V +VI + ET++SRGFGFV + E ++ + K
Sbjct: 110 KIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSK 169
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR 230
N D + + KA P+ S R+P S+ + P R
Sbjct: 170 GNMIDMADTQVEIKKAEPKKSL-NRSPPSYGSHPRGR 205
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 221 RSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDE 280
+S D ++++G L D N+ + F ++G++ + ++ DR TG+ RGFGF+T +D
Sbjct: 11 QSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADP 70
Query: 281 AELNDAIAALDGQSLGGRTIRV 302
+ ++ I D + G+ + +
Sbjct: 71 SVVDKVIE--DTHVINGKQVEI 90
>AT5G47620.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:19302548-19304278 REVERSE LENGTH=431
Length = 431
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + ++ +L + F+ G V A ++ +R T ++RGFGFV AE+ V
Sbjct: 6 CKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVV- 64
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRP--ERAPRSFDAQP----AFRVYVGNLPWDFDNSQLE 246
L + G+++ KA PR ++ S P + +++VG L ++ +
Sbjct: 65 -LLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFK 123
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
+ F++ G + V+YD T R RGFGF++ D E D + L G+ + V +A
Sbjct: 124 KYFAQFGMITDVVVMYDHRTQRPRGFGFISY-DSEEAVDKVLQKTFHELNGKMVEVKLA 181
>AT5G47620.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:19302548-19304278 REVERSE LENGTH=431
Length = 431
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + ++ +L + F+ G V A ++ +R T ++RGFGFV AE+ V
Sbjct: 6 CKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVV- 64
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRP--ERAPRSFDAQP----AFRVYVGNLPWDFDNSQLE 246
L + G+++ KA PR ++ S P + +++VG L ++ +
Sbjct: 65 -LLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFK 123
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
+ F++ G + V+YD T R RGFGF++ D E D + L G+ + V +A
Sbjct: 124 KYFAQFGMITDVVVMYDHRTQRPRGFGFISY-DSEEAVDKVLQKTFHELNGKMVEVKLA 181
>AT4G09040.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:5795075-5797315 REVERSE LENGTH=304
Length = 304
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTV-DLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+L N+P+ + + LF + G+V D+ ++ +E ++RG F+ M + E+A A+
Sbjct: 95 RLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKE--RNRGLVFIEMASPEEAATALK 152
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVF-SE 251
L ++ GR L V+ A + + + P F ++V NL ++ L++ F ++
Sbjct: 153 SLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDAD 212
Query: 252 HGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
G VVS V++ RS G+GFV+ + + A+ G+ GR IR+
Sbjct: 213 TGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRL 263
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 135 LFVGNLPYDADGHKLAELFN-QVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
LFV NL ++A L E F+ G V EVI++ +S G+GFV+ KT + AE A+ +
Sbjct: 191 LFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIE 250
Query: 194 LNGYDFGGRLLTVNKA 209
G DF GR + + K+
Sbjct: 251 FQGKDFLGRPIRLAKS 266
>AT4G27000.1 | Symbols: ATRBP45C | RNA-binding (RRM/RBD/RNP motifs)
family protein | chr4:13554983-13557763 REVERSE
LENGTH=415
Length = 415
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++G+L D + L +F G A+VI N++ S G+GF+ AE+ +
Sbjct: 82 LWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTY 141
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQ-----------PAFRVYVGNLPWDFDNS 243
NG AP S E+A R AQ P V+VG+L D +
Sbjct: 142 NG-------------APMPSS-EQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDH 187
Query: 244 QLEQVFSE-HGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
L + F + V A+VV DR TGRS+G+GFV +DE+E A+ ++GQ R +R
Sbjct: 188 MLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRT 247
Query: 303 NVAEDR 308
A ++
Sbjct: 248 GPAANK 253
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 135 LFVGNLPYDADGHKLAELFNQV-GTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+FVG+L D H L E F V +V A+V+ +R T +S+G+GFV + +A+ +
Sbjct: 175 VFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTE 234
Query: 194 LNGYDFGGRLLTVNKAAPR-------GSRPERAPRSFDAQPA-FRVYVGNLPWDFDNSQL 245
+NG R + AA + S S ++ P ++VG + L
Sbjct: 235 MNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDL 294
Query: 246 EQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
+ VF + G++V ++ + G FV ++ A A++ L+G LGG++IR+
Sbjct: 295 KSVFGQFGELVHVKIPAGKRCG------FVQYANRACAEQALSVLNGTQLGGQSIRL 345
>AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein 1A |
chr1:20183923-20186824 REVERSE LENGTH=430
Length = 430
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++ GN+ L E+F G ++ ++I D+S +GFV A A+ L
Sbjct: 65 VYAGNIHTQVTEILLQEIFASTGPIESCKLI---RKDKS-SYGFVHYFDRRCASMAIMTL 120
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
NG G+ + VN A G R D F ++VG+L + ++ L FS
Sbjct: 121 NGRHIFGQPMKVNWAYATGQRE-------DTSSHFNIFVGDLSPEVTDAALFDSFSAFNS 173
Query: 255 VVS----ARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
S ARV++D++TGRSRGFGFV+ ++ + AI ++G+ + R IR N A
Sbjct: 174 CSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWA 228
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDL----AEVIYNRETDQSRGFGFVTMKTVEDAEKA 190
+FVG+L + L + F+ + A V+++++T +SRGFGFV+ + +DA+ A
Sbjct: 150 IFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 209
Query: 191 VDKLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQ------------------------ 226
++++NG R + N A +G+ S D +
Sbjct: 210 INEMNGKWVSSRQIRCNWAT-KGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPEN 268
Query: 227 -PAFR-VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELN 284
P F VYVGNL + L ++F G A V+ + R +GFGFV + E
Sbjct: 269 NPQFTTVYVGNLSPEVTQLDLHRLFYTLG----AGVIEEVRVQRDKGFGFVRYNTHDEAA 324
Query: 285 DAIAALDGQS-LGGRTIRVN 303
AI + Q L R IR +
Sbjct: 325 LAIQMGNAQPFLFSRQIRCS 344
>AT5G55550.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502135-22503658 REVERSE LENGTH=460
Length = 460
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + +D D +L + F+ G V A ++ +R T ++RGFGF+ +E+ +
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI- 64
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPE----------RAPRSFDAQPAFRVYVGNLPWDFDN 242
++ + GR + KA PR + +P +++VG LP
Sbjct: 65 -MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITE 123
Query: 243 SQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTM-SDEA 281
+ + F + G + V+YD T R RGFGF+T SD+A
Sbjct: 124 EEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDA 163
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G + WD D +L FS +G VV A ++ DR TGR+RGFGF+ +D I
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-- 64
Query: 290 LDGQSLGGRTIRVNVAEDR 308
+D + GRT+ A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FVG LP + F+Q GT+ V+Y+ T + RGFGF+T D++ AVD+
Sbjct: 111 KIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF----DSDDAVDR 166
Query: 194 L---NGYDFGGRLLTVNKAAPRGSRPERAPRS 222
+ ++ G+L+ V +A P+ P RS
Sbjct: 167 VLHKTFHELNGKLVEVKRAVPKEISPVSNIRS 198
>AT5G55550.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502135-22503658 REVERSE LENGTH=460
Length = 460
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + +D D +L + F+ G V A ++ +R T ++RGFGF+ +E+ +
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI- 64
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPE----------RAPRSFDAQPAFRVYVGNLPWDFDN 242
++ + GR + KA PR + +P +++VG LP
Sbjct: 65 -MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITE 123
Query: 243 SQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTM-SDEA 281
+ + F + G + V+YD T R RGFGF+T SD+A
Sbjct: 124 EEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDA 163
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G + WD D +L FS +G VV A ++ DR TGR+RGFGF+ +D I
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-- 64
Query: 290 LDGQSLGGRTIRVNVAEDR 308
+D + GRT+ A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FVG LP + F+Q GT+ V+Y+ T + RGFGF+T D++ AVD+
Sbjct: 111 KIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF----DSDDAVDR 166
Query: 194 L---NGYDFGGRLLTVNKAAPRGSRPERAPRS 222
+ ++ G+L+ V +A P+ P RS
Sbjct: 167 VLHKTFHELNGKLVEVKRAVPKEISPVSNIRS 198
>AT4G09040.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:5795075-5797193 REVERSE LENGTH=244
Length = 244
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTV-DLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+L N+P+ + + LF + G+V D+ ++ +E ++RG F+ M + E+A A+
Sbjct: 35 RLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKE--RNRGLVFIEMASPEEAATALK 92
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVF-SE 251
L ++ GR L V+ A + + + P F ++V NL ++ L++ F ++
Sbjct: 93 SLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDAD 152
Query: 252 HGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
G VVS V++ RS G+GFV+ + + A+ G+ GR IR+
Sbjct: 153 TGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRL 203
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 135 LFVGNLPYDADGHKLAELFN-QVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
LFV NL ++A L E F+ G V EVI++ +S G+GFV+ KT + AE A+ +
Sbjct: 131 LFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIE 190
Query: 194 LNGYDFGGRLLTVNKA 209
G DF GR + + K+
Sbjct: 191 FQGKDFLGRPIRLAKS 206
>AT5G55550.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502077-22503658 REVERSE LENGTH=448
Length = 448
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + +D D +L + F+ G V A ++ +R T ++RGFGF+ +E+ +
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI- 64
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPE----------RAPRSFDAQPAFRVYVGNLPWDFDN 242
++ + GR + KA PR + +P +++VG LP
Sbjct: 65 -MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITE 123
Query: 243 SQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTM-SDEA 281
+ + F + G + V+YD T R RGFGF+T SD+A
Sbjct: 124 EEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDA 163
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G + WD D +L FS +G VV A ++ DR TGR+RGFGF+ +D I
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-- 64
Query: 290 LDGQSLGGRTIRVNVAEDR 308
+D + GRT+ A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FVG LP + F+Q GT+ V+Y+ T + RGFGF+T D++ AVD+
Sbjct: 111 KIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF----DSDDAVDR 166
Query: 194 L---NGYDFGGRLLTVNKAAPRGSRPERAPRS 222
+ ++ G+L+ V +A P+ P RS
Sbjct: 167 VLHKTFHELNGKLVEVKRAVPKEISPVSNIRS 198
>AT5G55550.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502077-22503658 REVERSE LENGTH=448
Length = 448
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + +D D +L + F+ G V A ++ +R T ++RGFGF+ +E+ +
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI- 64
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPE----------RAPRSFDAQPAFRVYVGNLPWDFDN 242
++ + GR + KA PR + +P +++VG LP
Sbjct: 65 -MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITE 123
Query: 243 SQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTM-SDEA 281
+ + F + G + V+YD T R RGFGF+T SD+A
Sbjct: 124 EEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDA 163
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G + WD D +L FS +G VV A ++ DR TGR+RGFGF+ +D I
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-- 64
Query: 290 LDGQSLGGRTIRVNVAEDR 308
+D + GRT+ A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FVG LP + F+Q GT+ V+Y+ T + RGFGF+T D++ AVD+
Sbjct: 111 KIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF----DSDDAVDR 166
Query: 194 L---NGYDFGGRLLTVNKAAPRGSRPERAPRS 222
+ ++ G+L+ V +A P+ P RS
Sbjct: 167 VLHKTFHELNGKLVEVKRAVPKEISPVSNIRS 198
>AT3G08000.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:2555034-2555829 REVERSE LENGTH=143
Length = 143
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G L W D L+ FS G+V R+ YD+ +GRSRGFGFV ++E + A A
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 290 LDGQSLGGRTIRVNVAEDRPR 310
+DG+ L GR +R++ A +R R
Sbjct: 102 MDGKGLLGRPLRISFALERVR 122
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLF+G L + D L + F+ G V + Y++ + +SRGFGFV DA A D
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 194 LNGYDFGGRLLTVNKAAPR 212
++G GR L ++ A R
Sbjct: 102 MDGKGLLGRPLRISFALER 120
>AT1G49760.2 | Symbols: PAB8 | poly(A) binding protein 8 |
chr1:18416740-18419753 FORWARD LENGTH=671
Length = 671
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++V NL +L ++F + G V + VI +S+GFGFV + +DA +AVD L
Sbjct: 226 VYVKNLSESLSDEELNKVFGEFG-VTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDAL 284
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSF--------DAQPAFRVYVGNLPWDFDNSQLE 246
NG F + V KA + R + F D +YV NL + +L
Sbjct: 285 NGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLR 344
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA- 305
+ F+ G + S +V+ D +G SRG GFV S E AI ++G+ + + + V +A
Sbjct: 345 EHFAPFGTITSCKVMRD-PSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQ 403
Query: 306 --EDRPRR 311
EDR R
Sbjct: 404 RKEDRKAR 411
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+VG+L +L E F Q G V V + T +S G+G+V T +DA +A+++L
Sbjct: 47 LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
N GR + V + R P S +++ NL D+ L + FS G
Sbjct: 107 NFMALNGRAIRVMYSV-------RDP-SLRKSGVGNIFIKNLDKSIDHKALHETFSAFGP 158
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
++S +V D +G+S+G+GFV + AI L+G L + + V
Sbjct: 159 ILSCKVAVD-PSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYV 205
>AT1G49760.1 | Symbols: PAB8, PABP8 | poly(A) binding protein 8 |
chr1:18416740-18419753 FORWARD LENGTH=671
Length = 671
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++V NL +L ++F + G V + VI +S+GFGFV + +DA +AVD L
Sbjct: 226 VYVKNLSESLSDEELNKVFGEFG-VTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDAL 284
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSF--------DAQPAFRVYVGNLPWDFDNSQLE 246
NG F + V KA + R + F D +YV NL + +L
Sbjct: 285 NGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLR 344
Query: 247 QVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA- 305
+ F+ G + S +V+ D +G SRG GFV S E AI ++G+ + + + V +A
Sbjct: 345 EHFAPFGTITSCKVMRD-PSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQ 403
Query: 306 --EDRPRR 311
EDR R
Sbjct: 404 RKEDRKAR 411
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+VG+L +L E F Q G V V + T +S G+G+V T +DA +A+++L
Sbjct: 47 LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
N GR + V + R P S +++ NL D+ L + FS G
Sbjct: 107 NFMALNGRAIRVMYSV-------RDP-SLRKSGVGNIFIKNLDKSIDHKALHETFSAFGP 158
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
++S +V D +G+S+G+GFV + AI L+G L + + V
Sbjct: 159 ILSCKVAVD-PSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYV 205
>AT4G36690.3 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor,
large subunit, splicing factor | chr4:17294422-17297609
REVERSE LENGTH=565
Length = 565
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 134 KLFVGNLPYDADGHKLAELFNQV------GTVDLAEVIYNRETDQSRGFGFVTMKTVEDA 187
+++VG L A+ +A F+QV T + + N + + F FV M++VE+A
Sbjct: 240 RVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA 299
Query: 188 EKAVDKLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPA------------------- 228
A+ L+G F G + V + P P A +QP+
Sbjct: 300 SNAM-SLDGIIFEGAPVKVRR--PSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLE 356
Query: 229 --FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
R++VG LP+ F SQ+ ++ G + +V DRETG S+G+ F D + + A
Sbjct: 357 GPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIA 416
Query: 287 IAALDGQSLGGRTIRVNVA 305
AAL+G +G +T+ V A
Sbjct: 417 CAALNGIKMGDKTLTVRRA 435
>AT4G36690.2 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor,
large subunit, splicing factor | chr4:17294591-17297609
REVERSE LENGTH=542
Length = 542
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 134 KLFVGNLPYDADGHKLAELFNQV------GTVDLAEVIYNRETDQSRGFGFVTMKTVEDA 187
+++VG L A+ +A F+QV T + + N + + F FV M++VE+A
Sbjct: 240 RVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA 299
Query: 188 EKAVDKLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPA------------------- 228
A+ L+G F G + V + P P A +QP+
Sbjct: 300 SNAM-SLDGIIFEGAPVKVRR--PSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLE 356
Query: 229 --FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
R++VG LP+ F SQ+ ++ G + +V DRETG S+G+ F D + + A
Sbjct: 357 GPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIA 416
Query: 287 IAALDGQSLGGRTIRVNVA 305
AAL+G +G +T+ V A
Sbjct: 417 CAALNGIKMGDKTLTVRRA 435
>AT4G36690.1 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor,
large subunit, splicing factor | chr4:17294139-17297609
REVERSE LENGTH=573
Length = 573
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 134 KLFVGNLPYDADGHKLAELFNQV------GTVDLAEVIYNRETDQSRGFGFVTMKTVEDA 187
+++VG L A+ +A F+QV T + + N + + F FV M++VE+A
Sbjct: 240 RVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA 299
Query: 188 EKAVDKLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPA------------------- 228
A+ L+G F G + V + P P A +QP+
Sbjct: 300 SNAM-SLDGIIFEGAPVKVRR--PSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLE 356
Query: 229 --FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
R++VG LP+ F SQ+ ++ G + +V DRETG S+G+ F D + + A
Sbjct: 357 GPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIA 416
Query: 287 IAALDGQSLGGRTIRVNVA 305
AAL+G +G +T+ V A
Sbjct: 417 CAALNGIKMGDKTLTVRRA 435
>AT1G60900.1 | Symbols: | U2 snRNP auxilliary factor, large
subunit, splicing factor | chr1:22424008-22427806
FORWARD LENGTH=589
Length = 589
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 134 KLFVGNLPYDADGHKLAELFNQV------GTVDLAEVIYNRETDQSRGFGFVTMKTVEDA 187
+++VG LP A+ ++ F+QV T + + N + + F FV M++VE+A
Sbjct: 256 RVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA 315
Query: 188 EKAVDKLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQP-------------------- 227
A+ L+G G + V + P P A +QP
Sbjct: 316 SNAM-ALDGIILEGVPVKVRR--PTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTGGLE 372
Query: 228 -AFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
R++VG LP+ F Q+ ++ G + +V DRETG S+G+ F D + + A
Sbjct: 373 GPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIA 432
Query: 287 IAALDGQSLGGRTIRVNVA 305
AAL+G +G +T+ V A
Sbjct: 433 CAALNGIKMGDKTLTVRRA 451
>AT4G36690.4 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor,
large subunit, splicing factor | chr4:17294139-17297609
REVERSE LENGTH=551
Length = 551
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 134 KLFVGNLPYDADGHKLAELFNQV------GTVDLAEVIYNRETDQSRGFGFVTMKTVEDA 187
+++VG L A+ +A F+QV T + + N + + F FV M++VE+A
Sbjct: 218 RVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEA 277
Query: 188 EKAVDKLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPA------------------- 228
A+ L+G F G + V + P P A +QP+
Sbjct: 278 SNAM-SLDGIIFEGAPVKVRR--PSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLE 334
Query: 229 --FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
R++VG LP+ F SQ+ ++ G + +V DRETG S+G+ F D + + A
Sbjct: 335 GPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIA 394
Query: 287 IAALDGQSLGGRTIRVNVA 305
AAL+G +G +T+ V A
Sbjct: 395 CAALNGIKMGDKTLTVRRA 413
>AT5G47320.1 | Symbols: RPS19 | ribosomal protein S19 |
chr5:19203801-19204951 FORWARD LENGTH=212
Length = 212
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++Y+G L D L+ FS V ARV+ ++ TGRSRG+GFV E N AI+A
Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISA 91
Query: 290 LDGQSLGGRTIRVNVAEDRP 309
++GQ L G I VNVA+D P
Sbjct: 92 MNGQELNGFNISVNVAKDWP 111
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KL++G L D H L + F+ V A V+ N+ T +SRG+GFV + + A A+
Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISA 91
Query: 194 LNGYDFGGRLLTVNKAAPRGSRP 216
+NG + G ++VN A S P
Sbjct: 92 MNGQELNGFNISVNVAKDWPSLP 114
>AT5G19960.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:6744029-6746133 FORWARD LENGTH=337
Length = 337
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
VYVG LP+D + +VFS +G V++ ++V DR R + +GFVT S+ +DAI +
Sbjct: 9 VYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDRSV-RGKCYGFVTFSNRRSADDAIEDM 67
Query: 291 DGQSLGGRTIRVN 303
DG+S+GGR +RVN
Sbjct: 68 DGKSIGGRAVRVN 80
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
++VG LPYD + +F+ G+V +++ +R + + +GFVT A+ A++ +
Sbjct: 9 VYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDRSV-RGKCYGFVTFSNRRSADDAIEDM 67
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAP 220
+G GGR + VN RG R P
Sbjct: 68 DGKSIGGRAVRVNDVTTRGGRMNPGP 93
>AT1G47500.1 | Symbols: ATRBP47C', RBP47C' | RNA-binding protein
47C' | chr1:17432682-17434805 FORWARD LENGTH=434
Length = 434
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 135 LFVGNLPYDADGHKLAELFNQ-VGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+FVG+L D L E F++ +V A+V+ + T +S+G+GFV + KA+ +
Sbjct: 201 IFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTE 260
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR----------VYVGNLPWDFDNS 243
+NG R + + A PR + + + AF ++VG L +
Sbjct: 261 MNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDE 320
Query: 244 QLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV- 302
L+Q FSE G++VS ++ +G GFV + +A+ L+G +G +T+R+
Sbjct: 321 DLKQPFSEFGEIVSVKIPV------GKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLS 374
Query: 303 ---NVAEDRPRRSF 313
N A +PR +
Sbjct: 375 WGRNPANKQPRDKY 388
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLA--EVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
++VG+L D L F ++ +VI N+ S G+GFV ++ + A+K +
Sbjct: 105 IWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQ 164
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPER---------APRSFDAQPAFRVYVGNLPWDFDNS 243
+ NG P +P R R + P ++VG+L D ++
Sbjct: 165 EFNG-----------APMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDA 213
Query: 244 QLEQVFSE-HGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
L + FSE + V +A+VV D TGRS+G+GFV DE E A+ ++G R +R+
Sbjct: 214 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 273
Query: 303 NVAEDR 308
A R
Sbjct: 274 GPATPR 279
>AT4G13860.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:8022601-8023162 FORWARD LENGTH=87
Length = 87
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 228 AFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAI 287
A RVYVGNL + L + FS +G VV A V+ DR T RSRGFGFVT S +E A+
Sbjct: 2 ATRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAV 61
Query: 288 AALDGQSLGGRTIRVNV 304
+ +DG+ L GR + V +
Sbjct: 62 SGMDGKELNGRRVSVKL 78
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+++VGNL L E F+ G V A V+ +R TD+SRGFGFVT + +AE AV
Sbjct: 4 RVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSG 63
Query: 194 LNGYDFGGRLLTV 206
++G + GR ++V
Sbjct: 64 MDGKELNGRRVSV 76
>AT3G55340.1 | Symbols: PHIP1 | phragmoplastin interacting protein 1
| chr3:20515672-20517832 FORWARD LENGTH=597
Length = 597
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KL+VG +PY + ++ F G + + E G F+T T + A++A+
Sbjct: 162 KLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITFDTEDGAKRAL-A 220
Query: 194 LNGYDFGGRLLTVNKAAPRG--SRPER------APRSFDAQPAFRVYVGNLPWDFDNSQL 245
+ G R LT+ + S P R AP D RVY+GNL WD +
Sbjct: 221 FDRAAMGDRYLTIQQYVKTTTPSIPRRKTSSGFAPEMVDGYN--RVYIGNLAWDTTERDI 278
Query: 246 EQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA-ALDGQSLGGRTIRVNV 304
++FS+ + S R+ ++ETG +G+ V D + AIA LD Q + GR +++
Sbjct: 279 RKLFSDC-VINSVRLGKNKETGEFKGYAHVDFKDSVSV--AIALKLDQQVICGRPVKICC 335
Query: 305 A-EDRP 309
A +DRP
Sbjct: 336 ALKDRP 341
>AT4G39260.4 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=105
Length = 105
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 225 AQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELN 284
++ +R +VG L W ++ L++ FS+ G V+ ++++ DRE+GRSRGFGFVT DE +
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 285 DAIAALD 291
DAI ++
Sbjct: 62 DAIEEMN 68
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+ FVG L + + L F+Q G V +++I +RE+ +SRGFGFVT K + A+++
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 194 LN 195
+N
Sbjct: 67 MN 68
>AT1G71800.1 | Symbols: CSTF64 | cleavage stimulating factor 64 |
chr1:26999606-27001850 FORWARD LENGTH=461
Length = 461
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
V+VGN+P+D QL ++ E G VVS R+V DRETG+ +G+GF DE A L
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 291 DGQSLGGRTIRVNVAED 307
+ GR +RV+ AE+
Sbjct: 71 QSYEINGRQLRVDFAEN 87
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+FVGN+PYDA +L E+ +VG V ++ +RET + +G+GF K E A A L
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 195 NGYDFGGRLLTVN 207
Y+ GR L V+
Sbjct: 71 QSYEINGRQLRVD 83
>AT1G47490.2 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C |
chr1:17424801-17426114 FORWARD LENGTH=310
Length = 310
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 162 AEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKLNGYDFGGRLLTVNKAAPRGSRPER--- 218
+VI N+ S G+GFV ++ + A+K + + NG P +P R
Sbjct: 132 VKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNG-----------TTMPNTDQPFRLNW 180
Query: 219 ------APRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSE-HGKVVSARVVYDRETGRSRG 271
R + P ++VG+L D ++ L + FSE + V +A+VV D TGRS+G
Sbjct: 181 ASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKG 240
Query: 272 FGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDR 308
+GFV DE E A+ ++G R +R+ A R
Sbjct: 241 YGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 277
>AT5G09880.1 | Symbols: | Splicing factor, CC1-like |
chr5:3081646-3085179 REVERSE LENGTH=527
Length = 527
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F +P A + E F++ G V +I +R + +S+G G++ V A+ L
Sbjct: 170 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-AL 228
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQ----------PAFR-VYVGNLPWDFDNS 243
+G F G+ + V +P A ++ AQ PA R +YVGNL ++
Sbjct: 229 SGQLFLGQPVMV--------KPSEAEKNL-AQSNSTTVGGTGPADRKLYVGNLHFNMSEL 279
Query: 244 QLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQ-SLGGRTIRV 302
QL Q+F G V ++ D ETG+ +GFGF+ A AL+G+ + GRTI+V
Sbjct: 280 QLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKV 339
Query: 303 NVAED 307
+ D
Sbjct: 340 SSVSD 344
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KL+VGNL ++ +L ++F G V+L ++ + ET Q +GFGF+ +E ++ A
Sbjct: 266 KLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIA 325
Query: 194 LNG-YDFGGRLLTVNKAAPRGSRPERAPRS 222
LNG + GR + V+ + + AP+S
Sbjct: 326 LNGKLEIAGRTIKVSSVSDHIGTQDSAPKS 355
>AT5G04280.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein with retrovirus zinc finger-like domain |
chr5:1192461-1195413 FORWARD LENGTH=310
Length = 310
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%)
Query: 225 AQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELN 284
A+ R++VG L + + LE+ FS G ++ +++ +R+TGRSRGFGF+T +D ++
Sbjct: 3 AKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMD 62
Query: 285 DAIAALDGQSLGGRTIRVNVAE 306
++I + G+ G R I VN AE
Sbjct: 63 ESIREMHGRDFGDRVISVNRAE 84
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 50/80 (62%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+++FVG L + L F++ G + +++ R+T +SRGFGF+T ++++
Sbjct: 7 SRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIR 66
Query: 193 KLNGYDFGGRLLTVNKAAPR 212
+++G DFG R+++VN+A P+
Sbjct: 67 EMHGRDFGDRVISVNRAEPK 86
>AT4G14300.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:8231179-8232785 FORWARD LENGTH=411
Length = 411
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLFVG + ++ D KL E F G V A V+ ++ T + RGFGFV ++ +
Sbjct: 6 GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65
Query: 193 KLNGYDFGGRLLTVNKAAPR---------GSRPERAPRSFDA-QPAFRVYVGNLPWDFDN 242
+ + D R + V +A R G+ DA +++VG LP +
Sbjct: 66 EKHSIDT--REVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123
Query: 243 SQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
+ Q F +G V ++YD+ T R RGFGFV+ E + D++ L G+ + V
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAV-DSVLHKTFHDLSGKQVEV 182
Query: 303 NVA 305
A
Sbjct: 183 KRA 185
>AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C |
chr1:17424801-17427182 FORWARD LENGTH=432
Length = 432
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 162 AEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKLNGYDFGGRLLTVNKAAPRGSRPER--- 218
+VI N+ S G+GFV ++ + A+K + + NG P +P R
Sbjct: 132 VKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNG-----------TTMPNTDQPFRLNW 180
Query: 219 ------APRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSE-HGKVVSARVVYDRETGRSRG 271
R + P ++VG+L D ++ L + FSE + V +A+VV D TGRS+G
Sbjct: 181 ASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKG 240
Query: 272 FGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDR 308
+GFV DE E A+ ++G R +R+ A R
Sbjct: 241 YGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 277
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 135 LFVGNLPYDADGHKLAELFNQ-VGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+FVG+L D + L E F++ +V A+V+ + T +S+G+GFV + KA+ +
Sbjct: 199 IFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTE 258
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPER-----APRSFDAQPA-----FRVYVGNLPWDFDNS 243
+NG R + + A PR + + P +P ++VG L +
Sbjct: 259 MNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDE 318
Query: 244 QLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV- 302
L+Q F+E G++VS ++ +G GFV + +A+ L+G +G +T+R+
Sbjct: 319 DLKQPFNEFGEIVSVKIPV------GKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLS 372
Query: 303 ---NVAEDRPRRSF 313
N A +PR +
Sbjct: 373 WGRNPANKQPRDKY 386
>AT3G15010.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:5052844-5054058 FORWARD LENGTH=404
Length = 404
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLF+ L D L LF+ G ++ A VI ++ T +S+G+GFVT V+ A A+ K
Sbjct: 76 KLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLAL-K 134
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR-VYVGNLPWDFDNSQLEQVFSEH 252
GR +TV + A G+ + S A + R +YV N+P+D +L F +
Sbjct: 135 EPSKKIDGR-VTVTQLAASGN---QGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAY 190
Query: 253 GKVVSARVVYDRETGRSRGFG-FVTMSDE---AELNDAIAALDGQSL 295
G V + +D+ TG+SRGF FV + E A L D + +DG+ L
Sbjct: 191 GDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHL 237
>AT3G15010.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:5052844-5054058 FORWARD LENGTH=404
Length = 404
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLF+ L D L LF+ G ++ A VI ++ T +S+G+GFVT V+ A A+ K
Sbjct: 76 KLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLAL-K 134
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFR-VYVGNLPWDFDNSQLEQVFSEH 252
GR +TV + A G+ + S A + R +YV N+P+D +L F +
Sbjct: 135 EPSKKIDGR-VTVTQLAASGN---QGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAY 190
Query: 253 GKVVSARVVYDRETGRSRGFG-FVTMSDE---AELNDAIAALDGQSL 295
G V + +D+ TG+SRGF FV + E A L D + +DG+ L
Sbjct: 191 GDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHL 237
>AT2G33410.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:14156085-14157435 FORWARD LENGTH=404
Length = 404
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + +D D + L E F+ G V V+ + T + RGFGFV ++ +
Sbjct: 6 GKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQ 65
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAP----------RSFDAQPAFR---VYVGNLPWD 239
+ D R + V +A SR E++P R+FD+ R ++VG LP
Sbjct: 66 DKHHID--NRDVDVKRAM---SREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPA 120
Query: 240 FDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRT 299
+ + F +G V A ++ D+ T R RGFGFV+ E + D + L G+
Sbjct: 121 LTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSV-DLVLHKTFHDLNGKQ 179
Query: 300 IRVNVA 305
+ V A
Sbjct: 180 VEVKRA 185
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++++G + WD D + L + FS G+V+ V+ ++ TGR RGFGFV SD A ++ +
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQ- 65
Query: 290 LDGQSLGGRTIRVNVAEDRPRRS 312
D + R + V A R +S
Sbjct: 66 -DKHHIDNRDVDVKRAMSREEQS 87
>AT5G47620.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:19302548-19304278 REVERSE LENGTH=453
Length = 453
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 31/201 (15%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLF+G + ++ +L + F+ G V A ++ +R T ++RGFGFV AE+ V
Sbjct: 6 CKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVV- 64
Query: 193 KLNGYDFGGRLLT----------------------VNKAAPRGSRP--ERAPRSFDAQP- 227
L + G++L KA PR ++ S P
Sbjct: 65 -LLKHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQGSPG 123
Query: 228 ---AFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELN 284
+ +++VG L ++ ++ F++ G + V+YD T R RGFGF++ D E
Sbjct: 124 PSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISY-DSEEAV 182
Query: 285 DAIAALDGQSLGGRTIRVNVA 305
D + L G+ + V +A
Sbjct: 183 DKVLQKTFHELNGKMVEVKLA 203
>AT2G41060.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:17127138-17128493 FORWARD LENGTH=451
Length = 451
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 12/185 (6%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FV L +D L + F Q G ++ + + ++ + QS+G+GF+ K+ A A+ +
Sbjct: 129 KIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQ 188
Query: 194 LNGYDFGGRLLTVNKAA--PRGSRPERAP-RSFDAQPAFR-VYVGNLPWDFDNSQLEQVF 249
G R+ A+ P P AP + F+ + R +YV N+ D D +L + F
Sbjct: 189 PQ-KKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFF 247
Query: 250 SEHGKVVSARVVYDRETGRSRGFG-FVTMSDEAELNDAIAALD--GQSLGGRTIRVNVAE 306
S G++ + D+ TGR +GF FV S L A AL+ ++ G + + A
Sbjct: 248 SRFGEIEEGPLGLDKATGRPKGFALFVYRS----LESAKKALEEPHKTFEGHVLHCHKAN 303
Query: 307 DRPRR 311
D P++
Sbjct: 304 DGPKQ 308
>AT2G41060.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:17127138-17128493 FORWARD LENGTH=451
Length = 451
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 12/185 (6%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FV L +D L + F Q G ++ + + ++ + QS+G+GF+ K+ A A+ +
Sbjct: 129 KIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQ 188
Query: 194 LNGYDFGGRLLTVNKAA--PRGSRPERAP-RSFDAQPAFR-VYVGNLPWDFDNSQLEQVF 249
G R+ A+ P P AP + F+ + R +YV N+ D D +L + F
Sbjct: 189 PQ-KKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFF 247
Query: 250 SEHGKVVSARVVYDRETGRSRGFG-FVTMSDEAELNDAIAALD--GQSLGGRTIRVNVAE 306
S G++ + D+ TGR +GF FV S L A AL+ ++ G + + A
Sbjct: 248 SRFGEIEEGPLGLDKATGRPKGFALFVYRS----LESAKKALEEPHKTFEGHVLHCHKAN 303
Query: 307 DRPRR 311
D P++
Sbjct: 304 DGPKQ 308
>AT2G43410.4 | Symbols: FPA | RNA binding | chr2:18026397-18030989
REVERSE LENGTH=901
Length = 901
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+VG+L + L ELF + G +D V SRGF F+ + VE+A A + L
Sbjct: 20 LWVGSLTPETTESDLTELFGRYGDIDRITVY------SSRGFAFIYYRHVEEAVAAKEAL 73
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
G + G + + A P A+P ++VG + + LE+ FS+ GK
Sbjct: 74 QGANLNGSQIKIEYARP-------------AKPCKSLWVGGIGPNVSKDDLEEEFSKFGK 120
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA--LDGQSLGGRTIRVN 303
+ R + +R+T F+ D E++DA+ A ++G+ +GG +RV+
Sbjct: 121 IEDFRFLRERKT------AFI---DYYEMDDALQAKSMNGKPMGGSFLRVD 162
>AT2G43410.3 | Symbols: FPA | RNA binding | chr2:18026397-18030989
REVERSE LENGTH=901
Length = 901
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+VG+L + L ELF + G +D V SRGF F+ + VE+A A + L
Sbjct: 20 LWVGSLTPETTESDLTELFGRYGDIDRITVY------SSRGFAFIYYRHVEEAVAAKEAL 73
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
G + G + + A P A+P ++VG + + LE+ FS+ GK
Sbjct: 74 QGANLNGSQIKIEYARP-------------AKPCKSLWVGGIGPNVSKDDLEEEFSKFGK 120
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA--LDGQSLGGRTIRVN 303
+ R + +R+T F+ D E++DA+ A ++G+ +GG +RV+
Sbjct: 121 IEDFRFLRERKT------AFI---DYYEMDDALQAKSMNGKPMGGSFLRVD 162
>AT2G43410.2 | Symbols: FPA | RNA binding | chr2:18026397-18030989
REVERSE LENGTH=901
Length = 901
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+VG+L + L ELF + G +D V SRGF F+ + VE+A A + L
Sbjct: 20 LWVGSLTPETTESDLTELFGRYGDIDRITVY------SSRGFAFIYYRHVEEAVAAKEAL 73
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
G + G + + A P A+P ++VG + + LE+ FS+ GK
Sbjct: 74 QGANLNGSQIKIEYARP-------------AKPCKSLWVGGIGPNVSKDDLEEEFSKFGK 120
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA--LDGQSLGGRTIRVN 303
+ R + +R+T F+ D E++DA+ A ++G+ +GG +RV+
Sbjct: 121 IEDFRFLRERKT------AFI---DYYEMDDALQAKSMNGKPMGGSFLRVD 162
>AT5G41690.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:16670126-16674189 REVERSE LENGTH=567
Length = 567
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 24/197 (12%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
LFV NLPY+ + + F +VG V ++I N + + G GFV +V +AE+A+ K
Sbjct: 70 LFVANLPYETKIPNIIDFFKKVGEVVRVQLIVNLK-GKLVGCGFVEFASVNEAEEALQKK 128
Query: 195 NGYDFGGRLLTVNKAAPRGS------------------RPERAPRSFDAQPAFRV----Y 232
NG + ++ A + + R E P D +P V +
Sbjct: 129 NGECLDNNKIFLDVANKKATYLPPKYCIDHKVWDKDYRRLESHPIEEDERPPNSVEEVLF 188
Query: 233 VGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDG 292
V NL S + F+ G+VVS R++ + E G+ G+GFV + E A+ +G
Sbjct: 189 VANLSPQTKISDIFDFFNCVGEVVSIRLMVNHE-GKHVGYGFVEFASADETKKALENKNG 247
Query: 293 QSLGGRTIRVNVAEDRP 309
+ L I ++VA+ P
Sbjct: 248 EYLHDHKIFIDVAKTAP 264
>AT2G43410.1 | Symbols: FPA | RNA binding | chr2:18026397-18030989
REVERSE LENGTH=858
Length = 858
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+VG+L + L ELF + G +D V SRGF F+ + VE+A A + L
Sbjct: 20 LWVGSLTPETTESDLTELFGRYGDIDRITVY------SSRGFAFIYYRHVEEAVAAKEAL 73
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
G + G + + A P A+P ++VG + + LE+ FS+ GK
Sbjct: 74 QGANLNGSQIKIEYARP-------------AKPCKSLWVGGIGPNVSKDDLEEEFSKFGK 120
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA--LDGQSLGGRTIRVN 303
+ R + +R+T F+ D E++DA+ A ++G+ +GG +RV+
Sbjct: 121 IEDFRFLRERKT------AFI---DYYEMDDALQAKSMNGKPMGGSFLRVD 162
>AT5G06210.1 | Symbols: | RNA binding (RRM/RBD/RNP motifs) family
protein | chr5:1878497-1879515 FORWARD LENGTH=146
Length = 146
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 228 AFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAI 287
A ++++G L + L + FS+ G+VV A++V DR + RS+GFGFVT + E A+
Sbjct: 33 ASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKAL 92
Query: 288 AALDGQSLGGRTIRVNVAEDR 308
+GQ L GRTI V+ A+ +
Sbjct: 93 MEFNGQQLNGRTIFVDYAKAK 113
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+KLF+G L + L+E F++ G V A+++ +R +D+S+GFGFVT + ++A+KA+
Sbjct: 34 SKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALM 93
Query: 193 KLNGYDFGGRLLTVNKAAPRGS 214
+ NG GR + V+ A + S
Sbjct: 94 EFNGQQLNGRTIFVDYAKAKQS 115
>AT5G51300.3 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE LENGTH=804
Length = 804
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 213 GSRPERAP-RSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRG 271
GS P + P + +D +Y+G LP ++ L +FS G++V A+V+ DR TG S+G
Sbjct: 466 GSTPTKPPSKEYDET---NLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKG 522
Query: 272 FGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
+GFV +D N A+ A++G GRT+ V +A
Sbjct: 523 YGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIA 556
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++G LP + L LF+ G + +A+VI +R T S+G+GFV V+ A AV +
Sbjct: 482 LYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAM 541
Query: 195 NGYDFGGRLLTVNKAA 210
NGY F GR L V A
Sbjct: 542 NGYRFEGRTLAVRIAG 557
>AT5G51300.2 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE LENGTH=804
Length = 804
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 213 GSRPERAP-RSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRG 271
GS P + P + +D +Y+G LP ++ L +FS G++V A+V+ DR TG S+G
Sbjct: 466 GSTPTKPPSKEYDET---NLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKG 522
Query: 272 FGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
+GFV +D N A+ A++G GRT+ V +A
Sbjct: 523 YGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIA 556
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++G LP + L LF+ G + +A+VI +R T S+G+GFV V+ A AV +
Sbjct: 482 LYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAM 541
Query: 195 NGYDFGGRLLTVNKAA 210
NGY F GR L V A
Sbjct: 542 NGYRFEGRTLAVRIAG 557
>AT5G51300.1 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE LENGTH=804
Length = 804
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 213 GSRPERAP-RSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRG 271
GS P + P + +D +Y+G LP ++ L +FS G++V A+V+ DR TG S+G
Sbjct: 466 GSTPTKPPSKEYDET---NLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKG 522
Query: 272 FGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
+GFV +D N A+ A++G GRT+ V +A
Sbjct: 523 YGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIA 556
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++G LP + L LF+ G + +A+VI +R T S+G+GFV V+ A AV +
Sbjct: 482 LYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAM 541
Query: 195 NGYDFGGRLLTVNKAA 210
NGY F GR L V A
Sbjct: 542 NGYRFEGRTLAVRIAG 557
>AT3G18610.1 | Symbols: PARLL1, ATNUC-L2, NUC-L2 | nucleolin like 2
| chr3:6404270-6407822 REVERSE LENGTH=636
Length = 636
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 14/184 (7%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQS-RGFGFVTMKTVEDAEKAVDK 193
LF GNL Y + F + G ++ +V + D S +G+G + + E+A+KA++
Sbjct: 386 LFAGNLSYQIARSDIENFFKEAG--EVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALE- 442
Query: 194 LNGYDFGGRLLTVN----KAAPRGSRPERAPRSFDAQPAF-RVYVGNLPWDFDNSQLEQV 248
+NG GR + ++ + PR S P R ++ + R + +L D +L
Sbjct: 443 MNGKLLLGRDVRLDLANERGTPRNSNPGRKGEGSQSRTIYVRGFSSSLGEDEIKKELRSH 502
Query: 249 FSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDR 308
FS+ G+V V DRETG SRGF ++ ++ + ++A+ L G +GG I +V E R
Sbjct: 503 FSKCGEVTRVHVPTDRETGASRGFAYIDLT--SGFDEAL-QLSGSEIGGGNI--HVEESR 557
Query: 309 PRRS 312
PR S
Sbjct: 558 PRDS 561
>AT5G06000.1 | Symbols: EIF3G2, ATEIF3G2 | eukaryotic translation
initiation factor 3G2 | chr5:1808169-1809742 FORWARD
LENGTH=308
Length = 308
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 137 VGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKLNG 196
V NL D G L ELF G V V +++T SRGFGFV+ + EDA++A++KLNG
Sbjct: 210 VTNLSEDTRGPDLMELFRPFGAVTRCHVAIDQKTSMSRGFGFVSFVSREDAQRAINKLNG 269
Query: 197 YDFGGRLLTVNKAAPR 212
Y + +L V + P+
Sbjct: 270 YGYDNLILRVEWSTPK 285
>AT1G03457.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:861109-864019 REVERSE LENGTH=438
Length = 438
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 198 DFGGRLLTVNKAAPRGSRPERAPRSF------------------DAQPAFRVYVGNLPWD 239
++G L A PRG P R P + + +++ N+P +
Sbjct: 290 NYGYHGLQYPMAFPRGMIPPRLPLTTVSPGISNNGTSIPSSLQTEGPAGANLFIYNIPRE 349
Query: 240 FDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRT 299
F++ +L F GKV+SA+V D+ TG S+ FGF++ +A +AI ++G L G+
Sbjct: 350 FEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGCQLSGKK 409
Query: 300 IRVNVAED 307
++V + D
Sbjct: 410 LKVQLKRD 417
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLFVG +P +L LF + V+ +I + T RG F+T T EDA+K ++
Sbjct: 12 VKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDADKVIN 71
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRS-----------FDAQPAFRVYVGNLPWDFD 241
+ K P S P + + P +++VG LP +
Sbjct: 72 SFHN----------KKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLPKNVS 121
Query: 242 NSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSL 295
++++ +FSE+G + +++ S+G F+ + + A+ AL+G+ +
Sbjct: 122 ETEVQSLFSEYGTIKDLQILRG-SLQTSKGCLFLKYESKEQAVAAMEALNGRHI 174
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
A LF+ N+P + + +LA F G V A+V ++ T S+ FGF++ + A+ A++
Sbjct: 339 ANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAIN 398
Query: 193 KLNGYDFGGRLLTV 206
+NG G+ L V
Sbjct: 399 TMNGCQLSGKKLKV 412
>AT1G03457.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:861109-864019 REVERSE LENGTH=429
Length = 429
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 198 DFGGRLLTVNKAAPRGSRPERAPRSFDAQPAF-------------------RVYVGNLPW 238
++G L A PRG P R P + P +++ N+P
Sbjct: 281 NYGYHGLQYPMAFPRGMIPPRLPLT-TVSPGISNNGTSIPSSLQTEGPAGANLFIYNIPR 339
Query: 239 DFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGR 298
+F++ +L F GKV+SA+V D+ TG S+ FGF++ +A +AI ++G L G+
Sbjct: 340 EFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGCQLSGK 399
Query: 299 TIRVNVAED 307
++V + D
Sbjct: 400 KLKVQLKRD 408
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLFVG +P +L LF + V+ +I + T RG F+T T EDA+K ++
Sbjct: 12 VKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDADKVIN 71
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQ---PAFRVYVGNLPWDFDNSQLEQVF 249
+ K P S P + + D + +++VG LP + ++++ +F
Sbjct: 72 SFHN----------KKTLPGASSPLQV-KYADGELERLEHKLFVGMLPKNVSETEVQSLF 120
Query: 250 SEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSL 295
SE+G + +++ S+G F+ + + A+ AL+G+ +
Sbjct: 121 SEYGTIKDLQILRG-SLQTSKGCLFLKYESKEQAVAAMEALNGRHI 165
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
A LF+ N+P + + +LA F G V A+V ++ T S+ FGF++ + A+ A++
Sbjct: 330 ANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAIN 389
Query: 193 KLNGYDFGGRLLTV 206
+NG G+ L V
Sbjct: 390 TMNGCQLSGKKLKV 403
>AT2G21690.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:9270114-9270597 REVERSE LENGTH=117
Length = 117
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 229 FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA 288
+ +V L D D L +FS+ G V+ ++++YDR+TG+SR FGFVT +E + DAI
Sbjct: 7 YTCFVRGLDQDTDEKDLTDIFSKFGNVIDSKIIYDRDTGKSRRFGFVTFEEEKSMTDAIM 66
Query: 289 ALD-----GQSLGGRTIRVNVAEDRPR 310
+D + + +I V VA R +
Sbjct: 67 IMDVEESRSKCVNVGSITVEVARQRRK 93
>AT1G18630.1 | Symbols: GR-RBP6 | glycine-rich RNA-binding protein 6
| chr1:6415226-6416283 FORWARD LENGTH=155
Length = 155
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 218 RAPRSFDAQPAF----------RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETG 267
R PR+ A A +++VG L D L++ F GK+V A VV DRE+G
Sbjct: 15 RQPRALQASNAMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESG 74
Query: 268 RSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAE 306
SRGFGFVT N+A+ A+ + L GR I V+ A+
Sbjct: 75 LSRGFGFVTYDSIEVANNAMQAMQNKELDGRIIGVHPAD 113
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+K+FVG L D L E F G + A V+ +RE+ SRGFGFVT ++E A A+
Sbjct: 36 SKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQ 95
Query: 193 KLNGYDFGGRLLTVNKA 209
+ + GR++ V+ A
Sbjct: 96 AMQNKELDGRIIGVHPA 112
>AT4G03110.1 | Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding
protein-defense related 1 | chr4:1376612-1379275 REVERSE
LENGTH=441
Length = 441
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
+++ N+P +F + +L F G V+SA+V D+ TG S+ FGFV+ +A +AI +
Sbjct: 351 LFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMM 410
Query: 291 DGQSLGGRTIRVNVAED 307
+G+ LGG+ ++V + D
Sbjct: 411 NGRHLGGKKLKVQLKRD 427
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLFVG +P +L LF + VD +I ++ T SRG F+ + E+A+K V+
Sbjct: 19 KLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVNA 78
Query: 194 L-NGYDFGG--RLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFS 250
N G LL V A R E +++VG LP + ++++ +FS
Sbjct: 79 CHNKKTLPGANSLLQVKYADGELERLEH-----------KLFVGMLPKNVSEAEVQSLFS 127
Query: 251 EHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQ-SLGGRTIRVNV 304
++G + +++ + S+G F+ + + A+ +++G+ + G T+ + V
Sbjct: 128 KYGTIKDLQILRGAQQ-TSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVV 181
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
A LF+ N+P + +LA F G V A+V ++ T S+ FGFV+ + A+ A+D
Sbjct: 349 ANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAID 408
Query: 193 KLNGYDFGGRLLTV 206
+NG GG+ L V
Sbjct: 409 MMNGRHLGGKKLKV 422
>AT2G21440.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:9173712-9179065 REVERSE LENGTH=1003
Length = 1003
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
A + V LPY +L E F++VG V ++ N+ +D+ RGF FV ED +A++
Sbjct: 20 ATVCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGSDEHRGFAFVKFALQEDVNRAIE 79
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPER 218
NG GGR +TV +AA R S ER
Sbjct: 80 LKNGSTVGGRRITVKQAAHRPSLQER 105
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
V V LP+ N+QLE+ FSE G V +V ++ + RGF FV + + ++N AI
Sbjct: 22 VCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGSDEHRGFAFVKFALQEDVNRAIELK 81
Query: 291 DGQSLGGRTIRVNVAEDRP 309
+G ++GGR I V A RP
Sbjct: 82 NGSTVGGRRITVKQAAHRP 100
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KL + NLP+ A + +F+ VG V + N ET +GF FV +DA A+ K
Sbjct: 332 KLIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFAFVKFTCKKDAANAIKK 391
Query: 194 LNGYDFGGRLLTVNKAAPR 212
NG+ FG R + V+ A P+
Sbjct: 392 FNGHMFGKRPIAVDWAVPK 410
>AT4G00830.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352782-354965 FORWARD LENGTH=495
Length = 495
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+++F+G LP D L +L ++G + ++ +R++ S+G+ FV KT + A+KA++
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 175
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
+L+ +F G+ + R ++ R+++GN+P ++ + +V +
Sbjct: 176 ELHSKEFKGKTI----------------RCSLSETKNRLFIGNIPKNWTEDEFRKVIEDV 219
Query: 253 GK-VVSARVVYD-RETGRSRGFGFVTMSDEA 281
G V + ++ D T R+RGF FV + A
Sbjct: 220 GPGVENIELIKDPTNTTRNRGFAFVLYYNNA 250
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGT-VDLAEVIYN-RETDQSRGFGFVTMKTVEDAEKAV 191
+LF+GN+P + + ++ VG V+ E+I + T ++RGF FV A+ +
Sbjct: 197 RLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLYYNNACADYSR 256
Query: 192 DKL--NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVF 249
K+ + + G TV A P+ S PE S A +YV N+P + QL+++F
Sbjct: 257 QKMIDSNFKLEGNAPTVTWADPKSS-PEH---SAAAAQVKALYVKNIPENTSTEQLKELF 312
Query: 250 SEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRP 309
HG+V ++V G R FGFV ++ + A+ + + G+ + V +A+ +
Sbjct: 313 QRHGEVT--KIVTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQA 370
Query: 310 RR 311
R
Sbjct: 371 ER 372
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
V++G LP D L + E G++ R++ DR++G S+G+ FV + AI L
Sbjct: 118 VFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEEL 177
Query: 291 DGQSLGGRTIRVNVAEDRPR 310
+ G+TIR +++E + R
Sbjct: 178 HSKEFKGKTIRCSLSETKNR 197
>AT4G00830.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352782-354965 FORWARD LENGTH=495
Length = 495
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+++F+G LP D L +L ++G + ++ +R++ S+G+ FV KT + A+KA++
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 175
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
+L+ +F G+ + R ++ R+++GN+P ++ + +V +
Sbjct: 176 ELHSKEFKGKTI----------------RCSLSETKNRLFIGNIPKNWTEDEFRKVIEDV 219
Query: 253 GK-VVSARVVYD-RETGRSRGFGFVTMSDEA 281
G V + ++ D T R+RGF FV + A
Sbjct: 220 GPGVENIELIKDPTNTTRNRGFAFVLYYNNA 250
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGT-VDLAEVIYN-RETDQSRGFGFVTMKTVEDAEKAV 191
+LF+GN+P + + ++ VG V+ E+I + T ++RGF FV A+ +
Sbjct: 197 RLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLYYNNACADYSR 256
Query: 192 DKL--NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVF 249
K+ + + G TV A P+ S PE S A +YV N+P + QL+++F
Sbjct: 257 QKMIDSNFKLEGNAPTVTWADPKSS-PEH---SAAAAQVKALYVKNIPENTSTEQLKELF 312
Query: 250 SEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRP 309
HG+V ++V G R FGFV ++ + A+ + + G+ + V +A+ +
Sbjct: 313 QRHGEVT--KIVTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQA 370
Query: 310 RR 311
R
Sbjct: 371 ER 372
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
V++G LP D L + E G++ R++ DR++G S+G+ FV + AI L
Sbjct: 118 VFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEEL 177
Query: 291 DGQSLGGRTIRVNVAEDRPR 310
+ G+TIR +++E + R
Sbjct: 178 HSKEFKGKTIRCSLSETKNR 197
>AT4G16280.4 | Symbols: | RNA binding;abscisic acid binding |
chr4:9207164-9214187 REVERSE LENGTH=672
Length = 672
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLFVG++P A ++ F Q G V +I ++ T Q +G FV T +DA++A+
Sbjct: 46 KLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRA 105
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHG 253
L+ ++ P R R F+++VG+L ++E++F + G
Sbjct: 106 LH-----NQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFG 160
Query: 254 KVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDG 292
V ++ D E +SRG GFV S + A+AA+DG
Sbjct: 161 HVEDVYLMRD-EYRQSRGCGFVKYSSK---ETAMAAIDG 195
>AT4G16280.2 | Symbols: FCA | RNA binding;abscisic acid binding |
chr4:9207164-9214412 REVERSE LENGTH=747
Length = 747
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLFVG++P A ++ F Q G V +I ++ T Q +G FV T +DA++A+
Sbjct: 121 KLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRA 180
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHG 253
L+ ++ P R R F+++VG+L ++E++F + G
Sbjct: 181 LH-----NQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFG 235
Query: 254 KVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDG 292
V ++ D E +SRG GFV S + A+AA+DG
Sbjct: 236 HVEDVYLMRD-EYRQSRGCGFVKYSSK---ETAMAAIDG 270
>AT4G16280.3 | Symbols: FCA | RNA binding;abscisic acid binding |
chr4:9208564-9214412 REVERSE LENGTH=533
Length = 533
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
KLFVG++P A ++ F Q G V +I ++ T Q +G FV T +DA++A+
Sbjct: 121 KLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRA 180
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHG 253
L+ ++ P R R F+++VG+L ++E++F + G
Sbjct: 181 LH-----NQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFG 235
Query: 254 KVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDG 292
V ++ D E +SRG GFV S + A+AA+DG
Sbjct: 236 HVEDVYLMRD-EYRQSRGCGFVKYSSK---ETAMAAIDG 270
>AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G1 | chr3:3578536-3580366 FORWARD
LENGTH=321
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 137 VGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKLNG 196
V NL D L ELF+ G V V +++T SRGFGFV + EDA++A++KLNG
Sbjct: 244 VTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 303
Query: 197 YDFGGRLLTVNKAAPR 212
Y + +L V A PR
Sbjct: 304 YGYDNLILRVEWATPR 319
>AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G1 | chr3:3578536-3580366 FORWARD
LENGTH=294
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 137 VGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKLNG 196
V NL D L ELF+ G V V +++T SRGFGFV + EDA++A++KLNG
Sbjct: 217 VTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 276
Query: 197 YDFGGRLLTVNKAAPR 212
Y + +L V A PR
Sbjct: 277 YGYDNLILRVEWATPR 292
>AT1G48920.1 | Symbols: ATNUC-L1, PARL1, NUC-L1 | nucleolin like 1 |
chr1:18098186-18101422 FORWARD LENGTH=557
Length = 557
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
LF NL ++ + + F + G V NR+ RGFG V + E+A+KA++
Sbjct: 299 LFAANLSFNIERADVENFFKEAGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKALE-F 357
Query: 195 NGYDFGGRLLTVNKAAPRGSRPER---APRS------FDAQPAFRVYV----GNLPWDFD 241
+G GR + ++ A RG R ER P+S D +++V +L D
Sbjct: 358 HGRPLLGREIRLDIAQERGERGERPAFTPQSGNFRSGGDGGDEKKIFVKGFDASLSEDDI 417
Query: 242 NSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIR 301
+ L + FS G++ + V DR+TG S+G ++ S E + L+G +GG
Sbjct: 418 KNTLREHFSSCGEIKNVSVPIDRDTGNSKGIAYLEFS---EGKEKALELNGSDMGGGFYL 474
Query: 302 VNVAEDRP 309
V V E RP
Sbjct: 475 V-VDEPRP 481
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
++ NL ++ + + +E F E G+VV R +R+ G RGFG V + E A+
Sbjct: 299 LFAANLSFNIERADVENFFKEAGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKAL-EF 357
Query: 291 DGQSLGGRTIRVNVAEDRPRR 311
G+ L GR IR+++A++R R
Sbjct: 358 HGRPLLGREIRLDIAQERGER 378
>AT4G00830.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352842-354965 FORWARD LENGTH=467
Length = 467
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+++F+G LP D L +L ++G + ++ +R++ S+G+ FV KT + A+KA++
Sbjct: 96 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 155
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
+L+ +F G+ + R ++ R+++GN+P ++ + +V +
Sbjct: 156 ELHSKEFKGKTI----------------RCSLSETKNRLFIGNIPKNWTEDEFRKVIEDV 199
Query: 253 GKVVSARVVYDRETGRSRGFGFVTMSDEA 281
G T R+RGF FV + A
Sbjct: 200 GPGDPTN------TTRNRGFAFVLYYNNA 222
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+LF+GN+P + + ++ VG D T ++RGF FV A+ + K
Sbjct: 177 RLFIGNIPKNWTEDEFRKVIEDVGPGDPTN------TTRNRGFAFVLYYNNACADYSRQK 230
Query: 194 L--NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSE 251
+ + + G TV A P+ S PE S A +YV N+P + QL+++F
Sbjct: 231 MIDSNFKLEGNAPTVTWADPKSS-PEH---SAAAAQVKALYVKNIPENTSTEQLKELFQR 286
Query: 252 HGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRPRR 311
HG+V ++V G R FGFV ++ + A+ + + G+ + V +A+ + R
Sbjct: 287 HGEVT--KIVTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAER 344
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
V++G LP D L + E G++ R++ DR++G S+G+ FV + AI L
Sbjct: 98 VFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEEL 157
Query: 291 DGQSLGGRTIRVNVAEDRPR 310
+ G+TIR +++E + R
Sbjct: 158 HSKEFKGKTIRCSLSETKNR 177
>AT5G11412.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:3640349-3640876 REVERSE LENGTH=175
Length = 175
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSD 279
++YVG LPW+ N L F + G ++ +V DRETGRS G+GFVT D
Sbjct: 53 KIYVGGLPWETRNEGLRSYFEQFGDIIHVNMVCDRETGRSEGYGFVTFRD 102
>AT3G61860.1 | Symbols: ATRSP31, RSP31, At-RS31, RS31 | RNA-binding
(RRM/RBD/RNP motifs) family protein |
chr3:22900311-22902159 REVERSE LENGTH=264
Length = 264
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+FVGN Y+ L LF++ G VD D G+ FV + DAE A+ KL
Sbjct: 4 VFVGNFEYETRQSDLERLFDKYGRVD--------RVDMKSGYAFVYFEDERDAEDAIRKL 55
Query: 195 NGYDFG--GRLLTVNKAAPRGSRPE---RAPRSFDAQPAFRVYVGNL-PWDFDNSQLEQV 248
+ + FG R L+V A RP +AP + +P ++V N P +E+
Sbjct: 56 DNFPFGYEKRRLSVEWAKGERGRPRGDAKAPSNL--KPTKTLFVINFDPIRTKEHDIEKH 113
Query: 249 FSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
F +GKV + R+ R F FV + + A+ A + R + V A
Sbjct: 114 FEPYGKVTNVRI--------RRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYA 162
>AT3G46020.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:16912511-16913250 REVERSE LENGTH=102
Length = 102
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
+++V L + L Q+FS G++ AR++ D ET R +GFGF+T E + A+ +
Sbjct: 8 QLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKS 67
Query: 290 LDGQSLGGRTIRVNVAED 307
LDG+ + GR I V VA++
Sbjct: 68 LDGKIVDGRLIFVEVAKN 85
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
A+LFV L L +LF+ G + A +I + ET + +GFGF+T + +DA KA+
Sbjct: 7 AQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALK 66
Query: 193 KLNGYDFGGRLLTVNKA 209
L+G GRL+ V A
Sbjct: 67 SLDGKIVDGRLIFVEVA 83
>AT1G22330.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:7886693-7889241 FORWARD LENGTH=291
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
+V+VG L W+ ++ + F + G+++ A ++ D+ TG+S+G+GFVT D A+A
Sbjct: 18 KVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGFVTFRDSDSATRAVAD 77
Query: 290 LDGQSLGGRTIRVNVAE-DRPRRS 312
+ + GR N+A RPR S
Sbjct: 78 PN-PVIDGRKANCNIASFGRPRPS 100
>AT3G47120.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:17351334-17352769 REVERSE LENGTH=352
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
VYVG +P+D L VFS++G++V ++ D+ TG+S+GF F+ D+ A+ L
Sbjct: 38 VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97
Query: 291 DGQSLGGRTIRVN 303
+G + GRTI+V+
Sbjct: 98 NGALVLGRTIKVD 110
>AT1G76460.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:28686932-28688506 REVERSE LENGTH=285
Length = 285
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
+V+VG L W+ + L Q F ++G+++ A V+ D+ TGRS+G+GFVT D A A
Sbjct: 25 KVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRACAD 84
Query: 290 LDGQSLGGRTIRVNVAE-DRPR 310
+ GR N+A RPR
Sbjct: 85 PT-PIIDGRRANCNLASLGRPR 105
>AT4G25500.4 | Symbols: RSP35, RS40, At-RS40 | arginine/serine-rich
splicing factor 35 | chr4:13025168-13027243 FORWARD
LENGTH=350
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 28/181 (15%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F GN YDA L LF + G V+ D GF FV M+ DAE A+ L
Sbjct: 4 VFCGNFEYDAREGDLERLFRKYGKVE--------RVDMKAGFAFVYMEDERDAEDAIRAL 55
Query: 195 NGYDFG--GRLLTV-----NKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQ--- 244
+ ++FG GR L V + + S S +P+ ++V N +D DN++
Sbjct: 56 DRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVIN--FDADNTRTRD 113
Query: 245 LEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNV 304
LE+ F +GK+V+ R+ R F F+ + + A+ A + L + I V
Sbjct: 114 LEKHFEPYGKIVNVRI--------RRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEY 165
Query: 305 A 305
A
Sbjct: 166 A 166
>AT4G25500.1 | Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40,
At-RS40 | arginine/serine-rich splicing factor 35 |
chr4:13025168-13027243 FORWARD LENGTH=350
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 28/181 (15%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F GN YDA L LF + G V+ D GF FV M+ DAE A+ L
Sbjct: 4 VFCGNFEYDAREGDLERLFRKYGKVE--------RVDMKAGFAFVYMEDERDAEDAIRAL 55
Query: 195 NGYDFG--GRLLTV-----NKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQ--- 244
+ ++FG GR L V + + S S +P+ ++V N +D DN++
Sbjct: 56 DRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVIN--FDADNTRTRD 113
Query: 245 LEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNV 304
LE+ F +GK+V+ R+ R F F+ + + A+ A + L + I V
Sbjct: 114 LEKHFEPYGKIVNVRI--------RRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEY 165
Query: 305 A 305
A
Sbjct: 166 A 166
>AT5G08695.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:2829341-2834189 FORWARD LENGTH=690
Length = 690
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+LFV LPY +L E F++ G + ++ +++T RG FV E A+ A+DK
Sbjct: 228 RLFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPESAKMAMDK 287
Query: 194 LNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQ 247
L+ F GR L + A PR ++ S NLP F + EQ
Sbjct: 288 LDKLPFQGRTLHILPAKPRAMSAKQVDNS-----------SNLPKSFKKEREEQ 330
>AT3G52660.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:19522598-19524735 FORWARD LENGTH=471
Length = 471
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+++++G +P DA L +G V ++ +++ +G+ FVT ++ + A +A+D
Sbjct: 92 SEVYLGGIPTDATEGDLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAID 151
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
LN DF G+ + + Q R+++GN+P ++ S +++ +
Sbjct: 152 TLNNTDFRGKRIKCST----------------TQAKHRLFLGNVPRNWMESDIKKAANRI 195
Query: 253 GKVVSARVVYDRE---TGRSRGFGFVTMSDEA 281
G V V +E GR+RGF F+ + A
Sbjct: 196 GPGVQI-VELPKEPQNMGRNRGFAFIEYYNHA 226
>AT3G52660.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:19522598-19524735 FORWARD LENGTH=471
Length = 471
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+++++G +P DA L +G V ++ +++ +G+ FVT ++ + A +A+D
Sbjct: 92 SEVYLGGIPTDATEGDLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAID 151
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
LN DF G+ + + Q R+++GN+P ++ S +++ +
Sbjct: 152 TLNNTDFRGKRIKCST----------------TQAKHRLFLGNVPRNWMESDIKKAANRI 195
Query: 253 GKVVSARVVYDRE---TGRSRGFGFVTMSDEA 281
G V V +E GR+RGF F+ + A
Sbjct: 196 GPGVQI-VELPKEPQNMGRNRGFAFIEYYNHA 226
>AT4G00830.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352782-354965 FORWARD LENGTH=495
Length = 495
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 18/151 (11%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
+++F+G LP D L +L ++G + ++ +R++ S+G+ FV KT + A+KA++
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 175
Query: 193 KLNGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEH 252
+L+ +F + S S + R+++GN+P ++ + +V +
Sbjct: 176 ELHSKEF------------KASSTANCSLSL----SNRLFIGNIPKNWTEDEFRKVIEDV 219
Query: 253 GK-VVSARVVYD-RETGRSRGFGFVTMSDEA 281
G V + ++ D T R+RGF FV + A
Sbjct: 220 GPGVENIELIKDPTNTTRNRGFAFVLYYNNA 250
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGT-VDLAEVIYN-RETDQSRGFGFVTMKTVEDAEKAV 191
+LF+GN+P + + ++ VG V+ E+I + T ++RGF FV A+ +
Sbjct: 197 RLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLYYNNACADYSR 256
Query: 192 DKL--NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVF 249
K+ + + G TV A P+ S PE S A +YV N+P + QL+++F
Sbjct: 257 QKMIDSNFKLEGNAPTVTWADPKSS-PEH---SAAAAQVKALYVKNIPENTSTEQLKELF 312
Query: 250 SEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRP 309
HG+V ++V G R FGFV ++ + A+ + + G+ + V +A+ +
Sbjct: 313 QRHGEVT--KIVTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQA 370
Query: 310 RR 311
R
Sbjct: 371 ER 372
>AT3G10400.1 | Symbols: | RNA recognition motif and CCHC-type zinc
finger domains containing protein | chr3:3232636-3233421
FORWARD LENGTH=261
Length = 261
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
+YV NL + NS + +FS GKV V+ DR T +SRG FV + A ++
Sbjct: 59 LYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSM 118
Query: 291 DGQSLGGRTIRVNVAEDRPRRS 312
D + L GR + V++A D R S
Sbjct: 119 DAKILNGRKLTVSIAADNGRAS 140
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+V NL + + LF+ G V V+ +R T QSRG FV + EDA KA +
Sbjct: 59 LYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSM 118
Query: 195 NGYDFGGRLLTVNKAAPRGSRPE 217
+ GR LTV+ AA G E
Sbjct: 119 DAKILNGRKLTVSIAADNGRASE 141
>AT4G03110.2 | Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding
protein-defense related 1 | chr4:1376710-1379275 REVERSE
LENGTH=439
Length = 439
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
KLFVG +P +L LF + VD +I ++ T SRG F+ + E+A+K V+
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 193 KL-NGYDFGG--RLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVF 249
N G LL V A R E +++VG LP + ++++ +F
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERLEH-----------KLFVGMLPKNVSEAEVQSLF 126
Query: 250 SEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQ-SLGGRTIRVNV 304
S++G + +++ + S+G F+ + + A+ +++G+ + G T+ + V
Sbjct: 127 SKYGTIKDLQILRGAQQ-TSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVV 181
>AT2G37510.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:15743112-15744504 REVERSE LENGTH=142
Length = 142
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
R++V L N +L+ F+ G++V ARV+ DR++GRS+GFGFVT + + A A
Sbjct: 35 RLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAE 94
Query: 290 LDGQSLGGRTIRVN 303
++ + L G I V+
Sbjct: 95 MNAKFLDGWVIFVD 108
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+LFV L KL + F G + A VI +R++ +S+GFGFVT T+EDAEKA +
Sbjct: 35 RLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAE 94
Query: 194 LNGYDFGGRLLTVN 207
+N G ++ V+
Sbjct: 95 MNAKFLDGWVIFVD 108
>AT3G56860.5 | Symbols: UBA2A | UBP1-associated protein 2A |
chr3:21050708-21052144 REVERSE LENGTH=478
Length = 478
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FV L +D L E F Q G ++ + ++++ + +S+G+GF+ K+ A A+ +
Sbjct: 141 KIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQ 200
Query: 194 LNGYDFGGRLLTVNKAAPRG-----------SRPERAPRSFDAQPAFRVYVGNLPWDFDN 242
G R +T + A +G + A S ++YV N+ + D
Sbjct: 201 PQ-KKIGSR-MTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDP 258
Query: 243 SQLEQVFSEHGKVVSARVVYDRETGRSRGFG-FVTMSDEA 281
+L FS+ G++ + D+ TGR +GF FV S E+
Sbjct: 259 QKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSES 298
>AT3G56860.4 | Symbols: UBA2A | UBP1-associated protein 2A |
chr3:21050708-21052144 REVERSE LENGTH=478
Length = 478
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FV L +D L E F Q G ++ + ++++ + +S+G+GF+ K+ A A+ +
Sbjct: 141 KIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQ 200
Query: 194 LNGYDFGGRLLTVNKAAPRG-----------SRPERAPRSFDAQPAFRVYVGNLPWDFDN 242
G R +T + A +G + A S ++YV N+ + D
Sbjct: 201 PQ-KKIGSR-MTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDP 258
Query: 243 SQLEQVFSEHGKVVSARVVYDRETGRSRGFG-FVTMSDEA 281
+L FS+ G++ + D+ TGR +GF FV S E+
Sbjct: 259 QKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSES 298
>AT3G56860.2 | Symbols: UBA2A | UBP1-associated protein 2A |
chr3:21050708-21052144 REVERSE LENGTH=478
Length = 478
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FV L +D L E F Q G ++ + ++++ + +S+G+GF+ K+ A A+ +
Sbjct: 141 KIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQ 200
Query: 194 LNGYDFGGRLLTVNKAAPRG-----------SRPERAPRSFDAQPAFRVYVGNLPWDFDN 242
G R +T + A +G + A S ++YV N+ + D
Sbjct: 201 PQ-KKIGSR-MTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDP 258
Query: 243 SQLEQVFSEHGKVVSARVVYDRETGRSRGFG-FVTMSDEA 281
+L FS+ G++ + D+ TGR +GF FV S E+
Sbjct: 259 QKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSES 298
>AT3G56860.1 | Symbols: UBA2A | UBP1-associated protein 2A |
chr3:21050708-21052144 REVERSE LENGTH=478
Length = 478
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FV L +D L E F Q G ++ + ++++ + +S+G+GF+ K+ A A+ +
Sbjct: 141 KIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQ 200
Query: 194 LNGYDFGGRLLTVNKAAPRG-----------SRPERAPRSFDAQPAFRVYVGNLPWDFDN 242
G R +T + A +G + A S ++YV N+ + D
Sbjct: 201 PQ-KKIGSR-MTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDP 258
Query: 243 SQLEQVFSEHGKVVSARVVYDRETGRSRGFG-FVTMSDEA 281
+L FS+ G++ + D+ TGR +GF FV S E+
Sbjct: 259 QKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSES 298
>AT3G56860.3 | Symbols: UBA2A | UBP1-associated protein 2A |
chr3:21050708-21052144 REVERSE LENGTH=478
Length = 478
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FV L +D L E F Q G ++ + ++++ + +S+G+GF+ K+ A A+ +
Sbjct: 141 KIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQ 200
Query: 194 LNGYDFGGRLLTVNKAAPRG-----------SRPERAPRSFDAQPAFRVYVGNLPWDFDN 242
G R +T + A +G + A S ++YV N+ + D
Sbjct: 201 PQ-KKIGSR-MTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDP 258
Query: 243 SQLEQVFSEHGKVVSARVVYDRETGRSRGFG-FVTMSDEA 281
+L FS+ G++ + D+ TGR +GF FV S E+
Sbjct: 259 QKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSES 298
>AT4G19610.1 | Symbols: | nucleotide binding;nucleic acid
binding;RNA binding | chr4:10677482-10681623 FORWARD
LENGTH=816
Length = 816
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
+LFV NLPY A +L E F+ G + ++ ++ET +SRG ++ E A +A+++
Sbjct: 295 RLFVRNLPYTATEEELMEHFSTFGKISEVHLVLDKETKRSRGIAYILYLIPECAARAMEE 354
Query: 194 LNGYDFGGRLLTVNKAAPR 212
L+ F GRLL + A R
Sbjct: 355 LDNSSFQGRLLHILPAKHR 373
>AT5G53680.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:21798382-21799109 FORWARD LENGTH=169
Length = 169
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSD 279
++YVG LPW L F G+++ VV DRET RS+G+GFVT D
Sbjct: 14 KIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKD 63
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVD 192
K++VG LP+ L F + G + V+ +RETD+S+G+GFVT K E A +A
Sbjct: 13 TKIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKDAESATRACK 72
Query: 193 KLNGYDFGGRLLTVN------KAAPRGSRPERAPR 221
N GR+ K P S+P P+
Sbjct: 73 DPNP-TIEGRITNCKLAFVGAKVKPNQSQPSNLPQ 106
>AT2G16940.2 | Symbols: | Splicing factor, CC1-like |
chr2:7342869-7347052 REVERSE LENGTH=610
Length = 610
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 22/188 (11%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F + A + E F++ G V +I +R + +SRG G+V A+ L
Sbjct: 233 VFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAI-AL 291
Query: 195 NGYDFGGRLLTVNKAAPRGSRPER-----------APRSFDAQPAFRVYVGNLPWDFDNS 243
+G G+ + V + + + P S A+ R+YVGNL +
Sbjct: 292 SGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGAR---RLYVGNLHINMSED 348
Query: 244 QLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA--LDGQ-SLGGRTI 300
L +VF G V +V D ETG +GFGFV A L DA A L+GQ + GR I
Sbjct: 349 DLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQF---ARLEDARNALNLNGQLEIAGRAI 404
Query: 301 RVNVAEDR 308
+V+ D+
Sbjct: 405 KVSAVTDQ 412
>AT5G19030.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:6357503-6359081 REVERSE LENGTH=172
Length = 172
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 148 KLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKLNGYDFGGRLLTVN 207
+L ++F++ G V ++I N T QS G+G+V + EDA+ AV+ +NG F GR + V
Sbjct: 92 RLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSAVEAMNGKFFDGRFILVK 151
Query: 208 KAAPRGSRPER 218
P SR R
Sbjct: 152 FGQPGLSRRRR 162
>AT1G78260.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:29447317-29450181 FORWARD LENGTH=287
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
+V+VG L W+ ++ + F + G+++ A ++ D+ TG+S+G+GFVT + A+A
Sbjct: 18 KVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAVAD 77
Query: 290 LDGQSLGGRTIRVNVA 305
+ + GR N+A
Sbjct: 78 PN-PVIDGRKANCNIA 92
>AT2G16940.1 | Symbols: | Splicing factor, CC1-like |
chr2:7342869-7347052 REVERSE LENGTH=561
Length = 561
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 22/188 (11%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F + A + E F++ G V +I +R + +SRG G+V A+ L
Sbjct: 184 VFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAI-AL 242
Query: 195 NGYDFGGRLLTVNKAAPRGSRPER-----------APRSFDAQPAFRVYVGNLPWDFDNS 243
+G G+ + V + + + P S A+ R+YVGNL +
Sbjct: 243 SGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGAR---RLYVGNLHINMSED 299
Query: 244 QLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA--LDGQ-SLGGRTI 300
L +VF G V +V D ETG +GFGFV A L DA A L+GQ + GR I
Sbjct: 300 DLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQF---ARLEDARNALNLNGQLEIAGRAI 355
Query: 301 RVNVAEDR 308
+V+ D+
Sbjct: 356 KVSAVTDQ 363
>AT1G07350.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:2258816-2259586 REVERSE LENGTH=129
Length = 129
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 41/87 (47%)
Query: 216 PERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFV 275
P R+ S P +YV L LE F++ GKV +V D T SRGFGF+
Sbjct: 32 PTRSVSSDAENPGNSLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFI 91
Query: 276 TMSDEAELNDAIAALDGQSLGGRTIRV 302
+M + N I +LD L GR I V
Sbjct: 92 SMKSVGDANRCIRSLDHSVLQGRVITV 118
>AT1G33470.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:12144632-12146040 FORWARD LENGTH=245
Length = 245
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSD----EAELND 285
+V+VG L W+ L F + G +V A V+ D+ +GRS+G+GFVT D + D
Sbjct: 8 KVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACVD 67
Query: 286 AIAALDGQSLGGRTIRVNVAEDRP 309
+DG+ V +P
Sbjct: 68 PAPVIDGRRANCNLAAFGVQRSKP 91
>AT1G33470.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:12144632-12146040 FORWARD LENGTH=244
Length = 244
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSD----EAELND 285
+V+VG L W+ L F + G +V A V+ D+ +GRS+G+GFVT D + D
Sbjct: 8 KVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACVD 67
Query: 286 AIAALDGQSLGGRTIRVNVAEDRP 309
+DG+ V +P
Sbjct: 68 PAPVIDGRRANCNLAAFGVQRSKP 91
>AT2G46780.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:19229516-19231043 FORWARD LENGTH=336
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
+++VG L W+ + + F + G++V A V+ D+ TGRS+G+GFVT + A
Sbjct: 23 KIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRACQN 82
Query: 290 LDGQSLGGRTIRVNVA---EDRPR 310
++ + GR N+A +PR
Sbjct: 83 MN-PVIDGRRANCNLACLGAQKPR 105
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDK 193
K+FVG L ++ + F Q G + A VI ++ T +S+G+GFVT K E A +A
Sbjct: 23 KIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRACQN 82
Query: 194 LNGYDFGGRLLTVNKAA--PRGSRPERAPR 221
+N GR N A + RP +PR
Sbjct: 83 MNPV-IDGRRANCNLACLGAQKPRPPTSPR 111
>AT1G78260.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:29447317-29449246 FORWARD LENGTH=271
Length = 271
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
+V+VG L W+ ++ + F + G+++ A ++ D+ TG+S+G+GFVT + A+A
Sbjct: 18 KVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAVAD 77
Query: 290 LDGQSLGGRTIRVNVA 305
+ + GR N+A
Sbjct: 78 PN-PVIDGRKANCNIA 92
>AT3G04500.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:1212065-1213795 REVERSE LENGTH=245
Length = 245
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 47/74 (63%)
Query: 229 FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA 288
+R++ G+L + ++ L + F+ A+V+ D+ TG+++G+GFV+ + A+L A+
Sbjct: 137 YRLFCGDLGNEVNDDVLSKAFARFPTFNMAKVIRDKRTGKTKGYGFVSFLNPADLAAALK 196
Query: 289 ALDGQSLGGRTIRV 302
++G+ +G R I++
Sbjct: 197 EMNGKYVGNRPIKL 210
>AT1G07350.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:2257732-2260101 REVERSE LENGTH=382
Length = 382
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L+V L + L + F + G V ++ + T +SRGFGF++MK+V DA + + L
Sbjct: 77 LYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSL 136
Query: 195 NGYDFGGRLLTVNKA 209
+ GR++TV KA
Sbjct: 137 DHSVLQGRVITVEKA 151
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 222 SFDAQ-PAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDE 280
S DA+ P +YV L LE F++ GKV +V D T SRGFGF++M
Sbjct: 67 SSDAENPGNSLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSV 126
Query: 281 AELNDAIAALDGQSLGGRTIRVNVA 305
+ N I +LD L GR I V A
Sbjct: 127 GDANRCIRSLDHSVLQGRVITVEKA 151
>AT5G04600.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:1323700-1325486 FORWARD LENGTH=222
Length = 222
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
+Y+G +P F +++E FS+ G V RV +++TG+S+ FGF+ D A A+
Sbjct: 62 LYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGAM 121
Query: 291 DGQSLGGRTIRVNVAE 306
+ L ++V+V E
Sbjct: 122 NDYLLMEHMLKVHVIE 137
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
L++G +P+ ++ F+Q GTV V N++T +S+ FGF+ + E AE A +
Sbjct: 62 LYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGAM 121
Query: 195 NGYDFGGRLLTVNKAAPRGSRP 216
N Y +L V+ P +P
Sbjct: 122 NDYLLMEHMLKVHVIEPENVKP 143
>AT1G20880.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:7262879-7264834 REVERSE LENGTH=274
Length = 274
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSD 279
+V+VG L W+ + L + F ++G ++ A V+ D+ TGRS+G+GFVT D
Sbjct: 25 KVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRD 74
>AT1G20880.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:7262879-7264834 REVERSE LENGTH=274
Length = 274
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSD 279
+V+VG L W+ + L + F ++G ++ A V+ D+ TGRS+G+GFVT D
Sbjct: 25 KVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRD 74
>AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 |
RNA-binding (RRM/RBD/RNP motifs) family protein |
chr1:626918-629583 FORWARD LENGTH=303
Length = 303
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
VYVGNLP D ++E +FS++G VV + + R G+ FV D + DAI
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDL---KVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 291 DGQSLGGRTIRVNVAE 306
DG G +RV +A
Sbjct: 66 DGYDFDGHRLRVELAH 81
>AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 |
RNA-binding (RRM/RBD/RNP motifs) family protein |
chr1:626918-629583 FORWARD LENGTH=303
Length = 303
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
VYVGNLP D ++E +FS++G VV + + R G+ FV D + DAI
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDL---KVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 291 DGQSLGGRTIRVNVAE 306
DG G +RV +A
Sbjct: 66 DGYDFDGHRLRVELAH 81
>AT5G54580.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22171332-22172656 FORWARD LENGTH=156
Length = 156
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 224 DAQPAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAEL 283
A+P+ ++V L + L F++ G+V A+VV DR +G S+GFGFV + +
Sbjct: 51 QAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDS 110
Query: 284 NDAIAALDGQSLGGRTIRVNVAEDRPR 310
IA +DG+ L G I A RPR
Sbjct: 111 AKGIAGMDGKFLDGWVIFAEYA--RPR 135
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
LFV L L F Q G V A+V+ +R + S+GFGFV T+ED+ K + +
Sbjct: 58 LFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGM 117
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGN 235
+G G ++ A PR P++ ++P Y GN
Sbjct: 118 DGKFLDGWVIFAEYARPREQSQSYQPQNNMSRPP---YYGN 155
>AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 |
RNA-binding (RRM/RBD/RNP motifs) family protein |
chr1:626918-628995 FORWARD LENGTH=285
Length = 285
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
VYVGNLP D ++E +FS++G VV + + R G+ FV D + DAI
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDL---KVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 291 DGQSLGGRTIRVNVAE 306
DG G +RV +A
Sbjct: 66 DGYDFDGHRLRVELAH 81
>AT5G64200.2 | Symbols: ATSC35, SC35, At-SC35 | ortholog of human
splicing factor SC35 | chr5:25681849-25683553 REVERSE
LENGTH=303
Length = 303
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 229 FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA 288
+ + V N+ + L +F+++GKVV + DR TG SRGF FV + E + A+
Sbjct: 16 YSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVE 75
Query: 289 ALDGQSLGGRTIRVNVAE 306
LDG+ + GR I V A+
Sbjct: 76 RLDGRVVDGREITVQFAK 93
>AT5G64200.1 | Symbols: ATSC35, SC35, At-SC35 | ortholog of human
splicing factor SC35 | chr5:25681849-25683553 REVERSE
LENGTH=303
Length = 303
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 229 FRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIA 288
+ + V N+ + L +F+++GKVV + DR TG SRGF FV + E + A+
Sbjct: 16 YSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVE 75
Query: 289 ALDGQSLGGRTIRVNVAE 306
LDG+ + GR I V A+
Sbjct: 76 RLDGRVVDGREITVQFAK 93
>AT3G06970.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:2199653-2201150 REVERSE LENGTH=317
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
+++VGNL W L + F + G+VV A VV + GRS+G+GF+T D + A
Sbjct: 13 KIFVGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFITFRDYVS---TVRA 69
Query: 290 LDGQS--LGGRTIRVNVA 305
L + GRT N+A
Sbjct: 70 LQNSKPIIDGRTTNCNLA 87
>AT1G22910.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:8105808-8107949 FORWARD LENGTH=347
Length = 347
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSD----EAELND 285
+V+VG L W+ +++ F + G+++ A V+ D+ +GRS+G+GFVT + + D
Sbjct: 14 KVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSACVD 73
Query: 286 AIAALDGQSLGGRTIRVNVAEDRP 309
A +DG+ + + +P
Sbjct: 74 ATPVIDGRRANCNLASLGLQRSKP 97
>AT1G22910.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:8105808-8107618 FORWARD LENGTH=242
Length = 242
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSD----EAELND 285
+V+VG L W+ +++ F + G+++ A V+ D+ +GRS+G+GFVT + + D
Sbjct: 14 KVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSACVD 73
Query: 286 AIAALDGQSLGGRTIRVNVAEDRP 309
A +DG+ + + +P
Sbjct: 74 ATPVIDGRRANCNLASLGLQRSKP 97
>AT1G22910.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:8105808-8107659 FORWARD LENGTH=249
Length = 249
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSD----EAELND 285
+V+VG L W+ +++ F + G+++ A V+ D+ +GRS+G+GFVT + + D
Sbjct: 14 KVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSACVD 73
Query: 286 AIAALDGQ 293
A +DG+
Sbjct: 74 ATPVIDGR 81
>AT4G02430.1 | Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RNP
motifs) family protein | chr4:1069186-1070543 FORWARD
LENGTH=178
Length = 178
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
+YVGNLP D ++E +FS++G VV + + R G+ FV D + +DAI
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDL---KIPPRPPGYAFVEFEDARDADDAIYGR 65
Query: 291 DGQSLGGRTIRVNVAE 306
DG G +RV +A
Sbjct: 66 DGYDFDGHHLRVELAH 81
>AT5G53720.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:21806622-21807012 FORWARD LENGTH=100
Length = 100
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 230 RVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAA 289
++YV LPW L F G++V A+VV D T RS+GFGFVT E+ A A
Sbjct: 10 KIYVAGLPWITRTEGLISYFERFGEIVYAKVVCDGATQRSKGFGFVTFR---EVESATRA 66
Query: 290 LD--GQSLGGRTIRVNVA 305
+ ++ GRT+ +A
Sbjct: 67 CENPNHTIDGRTVNCKLA 84
>AT1G09140.1 | Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININE
PROTEIN 30 | chr1:2942887-2945818 REVERSE LENGTH=268
Length = 268
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
+YVGNLP D ++E +F ++G +V + + R G+ FV D + +DAI
Sbjct: 9 IYVGNLPGDIRKCEVEDLFYKYGPIVDIDL---KIPPRPPGYAFVEFEDPRDADDAIYGR 65
Query: 291 DGQSLGGRTIRVNVAE 306
DG G +RV +A
Sbjct: 66 DGYDFDGCRLRVEIAH 81
>AT4G02430.2 | Symbols: SR34b, At-SR34b | RNA-binding (RRM/RBD/RNP
motifs) family protein | chr4:1069186-1071313 FORWARD
LENGTH=278
Length = 278
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
+YVGNLP D ++E +FS++G VV + + R G+ FV D + +DAI
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDL---KIPPRPPGYAFVEFEDARDADDAIYGR 65
Query: 291 DGQSLGGRTIRVNVAE 306
DG G +RV +A
Sbjct: 66 DGYDFDGHHLRVELAH 81
>AT5G52040.2 | Symbols: ATRSP41, RS41, At-RS41 | RNA-binding
(RRM/RBD/RNP motifs) family protein |
chr5:21131081-21133318 FORWARD LENGTH=357
Length = 357
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 27/180 (15%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F GN YDA L LF + G V+ D GF FV M+ DAE A+ L
Sbjct: 4 VFCGNFEYDARESDLERLFRKYGKVE--------RVDMKAGFAFVYMEDERDAEDAIRAL 55
Query: 195 NGYDFG--GRLLTV----NKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQ---L 245
+ +++G GR L V N G S +P+ ++V N +D N++ L
Sbjct: 56 DRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVIN--FDAQNTRTRDL 113
Query: 246 EQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
E+ F +GK+V+ R+ R F F+ + + A+ A + L + I V A
Sbjct: 114 ERHFEPYGKIVNVRI--------RRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYA 165
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 133 AKLFVGNLPYDADGHKLAELFNQVGTVDLAEVIY-NRETDQSRGFGFVTMKTVEDAEKAV 191
K+FVGNLP + E F Q G ++ +I + E +++ GFGF+ + A KAV
Sbjct: 165 GKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAAEKSAMKAV 224
Query: 192 DKLNGYDFGGRLLTVN 207
+ +G +F GR+LTV
Sbjct: 225 E-FDGVEFHGRILTVK 239
>AT5G52040.1 | Symbols: ATRSP41, RS41, At-RS41 | RNA-binding
(RRM/RBD/RNP motifs) family protein |
chr5:21131081-21133318 FORWARD LENGTH=356
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 27/180 (15%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
+F GN YDA L LF + G V+ D GF FV M+ DAE A+ L
Sbjct: 4 VFCGNFEYDARESDLERLFRKYGKVE--------RVDMKAGFAFVYMEDERDAEDAIRAL 55
Query: 195 NGYDFG--GRLLTV----NKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQ---L 245
+ +++G GR L V N G S +P+ ++V N +D N++ L
Sbjct: 56 DRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVIN--FDAQNTRTRDL 113
Query: 246 EQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVA 305
E+ F +GK+V+ R+ R F F+ + + A+ A + L + I V A
Sbjct: 114 ERHFEPYGKIVNVRI--------RRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYA 165
>AT1G09140.2 | Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININE
PROTEIN 30 | chr1:2943528-2945818 REVERSE LENGTH=256
Length = 256
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 231 VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAAL 290
+YVGNLP D ++E +F ++G +V + + R G+ FV D + +DAI
Sbjct: 9 IYVGNLPGDIRKCEVEDLFYKYGPIVDIDL---KIPPRPPGYAFVEFEDPRDADDAIYGR 65
Query: 291 DGQSLGGRTIRVNVAE 306
DG G +RV +A
Sbjct: 66 DGYDFDGCRLRVEIAH 81
>AT1G58470.1 | Symbols: ATRBP1, RBP1 | RNA-binding protein 1 |
chr1:21727374-21728539 FORWARD LENGTH=360
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 20/166 (12%)
Query: 134 KLFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFV-------TMKTVED 186
KLFVG + + L + F++ G V A V + T + RGFGFV +K + D
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 187 AE----------KAVDKLNGYD--FGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVG 234
KA+ K Y F + L G E + ++ +++VG
Sbjct: 67 THFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTK-KIFVG 125
Query: 235 NLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDE 280
L + + + F G+ V++D T R RGFGFVT E
Sbjct: 126 GLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSE 171
>AT2G19380.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:8383856-8386604 FORWARD LENGTH=613
Length = 613
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 206 VNKAAPRGSRPERAP-RSFDAQPAFR-VYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYD 263
+ K A +GSR A S D A R ++V WD L+ F +G++ VV D
Sbjct: 383 IYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMD 442
Query: 264 RETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRVNVAEDRPRRS 312
++TGR +G+GFV +A+ + + + R + N+A ++P ++
Sbjct: 443 KDTGRGKGYGFVMFKTRKGAREALKRPE-KRMYNRIVVCNLASEKPGKA 490
>AT5G07290.1 | Symbols: AML4, ML4 | MEI2-like 4 |
chr5:2294248-2298491 FORWARD LENGTH=907
Length = 907
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 17/168 (10%)
Query: 135 LFVGNLPYDADGHKLAELFNQVGTVDLAEVIYNRETDQSRGFGFVTMKTVEDAEKAVDKL 194
LFV N+ + +L LF Q G V ++RGF V+ + A+KA L
Sbjct: 213 LFVRNVDSSIEDCELGVLFKQFGDVRALHT-----AGKNRGFIMVSYYDIRAAQKAARAL 267
Query: 195 NGYDFGGRLLTVNKAAPRGSRPERAPRSFDAQPAFRVYVGNLPWDFDNSQLEQVFSEHGK 254
+G GR L + R S P+ P+ ++ A ++V NL N +L +FS +G+
Sbjct: 268 HGRLLRGRKLDI-----RYSIPKENPKENSSEGA--LWVNNLDSSISNEELHGIFSSYGE 320
Query: 255 VVSARVVYDRETGRSRGFGFVTMSDEAELNDAIAALDGQSLGGRTIRV 302
+ R T ++ D + A+ L+G + GR +++
Sbjct: 321 IREV-----RRTMHENSQVYIEFFDVRKAKVALQGLNGLEVAGRQLKL 363
>AT2G16940.3 | Symbols: | Splicing factor, CC1-like |
chr2:7342869-7347052 REVERSE LENGTH=599
Length = 599
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 228 AFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDAI 287
A R+YVGNL + L +VF G V +V D ETG +GFGFV A L DA
Sbjct: 322 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQF---ARLEDAR 377
Query: 288 AA--LDGQ-SLGGRTIRVNVAEDR 308
A L+GQ + GR I+V+ D+
Sbjct: 378 NALNLNGQLEIAGRAIKVSAVTDQ 401
>AT1G73530.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:27643801-27645386 REVERSE LENGTH=181
Length = 181
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 227 PAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
P ++YV L + L F + G ++ +V D+ R +GF F+ E E A
Sbjct: 75 PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKA 134
Query: 287 IAALDGQSLGGRTIRVNVAEDR-------PRRSF 313
I + G+ L GR I V A+ R PRR F
Sbjct: 135 IQGMHGKFLDGRVIFVEEAKTRSDMSRAKPRRDF 168
>AT4G35785.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:16953708-16955127 REVERSE LENGTH=207
Length = 207
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 227 PAFRVYVGNLPWDFDNSQLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEAELNDA 286
P +YV L + LE F++ GKV S +V + T SRGF FVTMS +
Sbjct: 70 PGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAERC 129
Query: 287 IAALDGQSLGGRTIRV 302
I L+ L GR I V
Sbjct: 130 IKYLNQSVLEGRYITV 145