Miyakogusa Predicted Gene

Lj0g3v0121929.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0121929.1 tr|D7LR49|D7LR49_ARALL Methyltransferase/ nucleic
acid binding protein OS=Arabidopsis lyrata subsp.
,60.27,6e-19,seg,NULL,NODE_67156_length_1648_cov_15.934466.path1.1
         (73 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26410.1 | Symbols: TRM11, AtTRM11 | methyltransferases;nucle...    97   3e-21

>AT3G26410.1 | Symbols: TRM11, AtTRM11 |
          methyltransferases;nucleic acid binding |
          chr3:9669508-9671273 REVERSE LENGTH=477
          Length = 477

 Score = 96.7 bits (239), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 6/73 (8%)

Query: 1  MWYLCVFFHRLLDYRKPEVESLAQLFGEANQNXXXXXXXXQLQWKLPLHHHPDSPFHLVN 60
          MW+LCVF+HRLLD+RKPEVE+LA+LFGE             LQW+LP +HH D+PFH V 
Sbjct: 1  MWFLCVFYHRLLDFRKPEVEALAELFGE------EIAENESLQWRLPENHHNDTPFHFVQ 54

Query: 61 LPSEQLARDIANR 73
          L SE++AR+IA R
Sbjct: 55 LSSEEIARNIAKR 67