Miyakogusa Predicted Gene

Lj0g3v0121919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0121919.1 Non Chatacterized Hit- tr|C0HFZ2|C0HFZ2_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,60.29,0.00000000000002,SUBFAMILY NOT NAMED,NULL; RNA
METHYLASE-RELATED,NULL,FS361265.path1.1
         (119 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26410.1 | Symbols: TRM11, AtTRM11 | methyltransferases;nucle...   179   3e-46

>AT3G26410.1 | Symbols: TRM11, AtTRM11 | methyltransferases;nucleic
           acid binding | chr3:9669508-9671273 REVERSE LENGTH=477
          Length = 477

 Score =  179 bits (454), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 84/119 (70%), Positives = 99/119 (83%), Gaps = 1/119 (0%)

Query: 1   MLVMGGRLVFFYPVLRDDDFSEIHFPEHPCFKLICSSEQILSSRYSRVLLTMVKIGPYTE 60
           MLVM GRLVFF+PVLRD+  SE+ FPEHPCFKL+  SEQILSSRYSRVLLTMVK+ PY+E
Sbjct: 360 MLVMKGRLVFFFPVLRDETGSEVKFPEHPCFKLVAVSEQILSSRYSRVLLTMVKVEPYSE 419

Query: 61  EIQEEARIKHIEFRENHVKWLEDGNLHSGVFSPADDQLSETGDFKSIKDQKPKYRGKYV 119
           E++E AR+ H+EFRENH+KWLEDGN+HS +F P D    +T D K+ KD KPKYRGKYV
Sbjct: 420 EVEEAARLMHLEFRENHLKWLEDGNIHSSIFKPIDSSQIDT-DSKAFKDPKPKYRGKYV 477