Miyakogusa Predicted Gene
- Lj0g3v0121809.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0121809.1 tr|Q0J729|Q0J729_ORYSJ Os08g0238100 protein
OS=Oryza sativa subsp. japonica GN=Os08g0238100 PE=4
SV=,33.98,9e-19,PPR,Pentatricopeptide repeat; PENTATRICOPEPTIDE (PPR)
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAM,CUFF.7274.1
(230 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 75 5e-14
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-14
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 72 3e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 7e-13
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 9e-13
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 67 8e-12
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 9e-12
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 65 3e-11
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 65 3e-11
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 4e-11
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 7e-11
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 7e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 8e-11
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 64 8e-11
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 64 1e-10
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 62 3e-10
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 62 4e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 62 5e-10
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 5e-10
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 6e-10
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 7e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 7e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 61 8e-10
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 9e-10
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-09
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 59 2e-09
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 59 2e-09
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 59 4e-09
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 4e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 5e-09
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 5e-09
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 58 6e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-09
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 57 8e-09
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 57 9e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 1e-08
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 56 2e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 56 2e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 3e-08
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 55 4e-08
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 55 4e-08
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 5e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 54 1e-07
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 54 1e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 54 1e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 4e-07
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 51 6e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 6e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 50 1e-06
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 50 1e-06
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 49 3e-06
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 6e-06
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 7e-06
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 8e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 8e-06
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 47 9e-06
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 37/237 (15%)
Query: 21 CLINQIFRPFSFQK---LTPRRENKELANAP----------RILNLVSPKKSAYDIKNRR 67
CL N R F +++ R N+E+AN R+L+++S K + NR+
Sbjct: 3 CLRNYYCRAFGYKQSRSCYSRSLNREIANESSEVERRARSLRVLDIISSKSGG--VSNRQ 60
Query: 68 SHLRLIEDMLENSA----SNPVGSNLATLRTTTEMSSVIEQEL-------------GVDV 110
H +++ + + + + RT +SSV+E+ + D
Sbjct: 61 DHFGFVQEFRQTDSWRFRGQAISEDFDLSRTKNGVSSVLEEVMLEDSSSSVKRDGWSFDA 120
Query: 111 CFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEE 170
LS AV SCG RD G +HCLA+ GFI++VY+GSSL+ LY + +AY+VFEE
Sbjct: 121 YGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE 180
Query: 171 MPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
MPERNVVS T +I+GFAQEWRVD+CL+L+ K + S + + F LLS CT
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKST-----SDPNDYTFTALLSACT 232
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 17/122 (13%)
Query: 96 TEMSSVIEQELGVDVCF-----------------LSHAVSSCGSKRDLYGGVQYHCLAIT 138
T M S QE VD+C + +S+C L G HC +
Sbjct: 190 TAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLH 249
Query: 139 TGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLEL 198
G + +++ +SLIS+Y +C L DA+R+F++ ++VVS +IAG+AQ +EL
Sbjct: 250 MGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIEL 309
Query: 199 FH 200
F
Sbjct: 310 FE 311
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C D+ GVQ H L + F+++VY+GS+L+ +YS+C + DA RVF+EM +RNV
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
VS +I F Q L++F L+ + TL S+IS
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVIS 261
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFI------ANVYVGSSLISLYSRCALLGDAYR 166
++ + +C +L+ G+Q H + GF +++VG+SLI +Y +C + + Y
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 167 VFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLK 204
VF +M ER+ VS +I GFAQ + LELF L+
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
H I +GF +++ + LI YS+C L D +VF++MP+RN+ + ++ G + +
Sbjct: 43 HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFL 102
Query: 193 DMCLELFHPHLKYSIHTLLSIISHF 217
D LF + T S++S F
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGF 127
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 112 FLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEM 171
+S +S+C L G H A+ ++VGS+L+ +Y +C + D+ + F+EM
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 172 PERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTR 228
PE+N+V+R +I G+A + +VDM L LF + + ++ F+ LLS C+R
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDMALALFE---EMAPRGCGPTPNYMTFVSLLSACSR 425
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H LA+ G I +V+VG S +Y + L DA ++F+E+PERN+ + I+
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 189 EWRVDMCLELF 199
+ R +E F
Sbjct: 187 DGRPREAIEAF 197
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 107 GVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYR 166
G++ ++ + CG D+ GG+Q HCLA+ +GF VYVG+SL+S+YSRC A R
Sbjct: 129 GMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAAR 185
Query: 167 VFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYS 206
+FE++P ++VV+ I+G + +++ +F+ K+S
Sbjct: 186 MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFS 225
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 72 LIEDMLENSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQ 131
I ++EN N V S +R E DV F+ +A+++C S +L G Q
Sbjct: 201 FISGLMENGVMNLVPSVFNLMRK-------FSSEEPNDVTFV-NAITACASLLNLQYGRQ 252
Query: 132 YHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE-RNVVSRTVIIAGFAQEW 190
H L + F VG++LI +YS+C AY VF E+ + RN++S +I+G
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING 312
Query: 191 RVDMCLELFHP----HLKYSIHTLLSIISHFPFL 220
+ + +ELF LK T S+IS F L
Sbjct: 313 QHETAVELFEKLDSEGLKPDSATWNSLISGFSQL 346
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ SC D+ G H + TGF +V+ ++L+S+Y + + DA +V +EMPER +
Sbjct: 38 LKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGI 97
Query: 177 VSRTVIIAGFAQ 188
S ++G +
Sbjct: 98 ASVNAAVSGLLE 109
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query: 113 LSHAVSSCG--SKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEE 170
L A SC S+ D+ G HCL++ TG+ A+V+VGSSL+ +Y++C + A ++F+E
Sbjct: 119 LPSATKSCAILSRCDI--GRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDE 176
Query: 171 MPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL-------KYSIHTLLSIISHFPFLVL 222
MP+RNVV+ + ++ G+AQ + L LF L YS +++S+ ++ L L
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLEL 235
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D L+ + +C LY G Q HCL++ G +++ GSSLI +YS+C ++ DA +VF
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 587
Query: 169 EEMPERNVVSRTVIIAGFAQ 188
+PE +VVS +IAG++Q
Sbjct: 588 SSLPEWSVVSMNALIAGYSQ 607
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L +S+ G +L G+ H AI G +N+YVGSSL+S+YS+C + A +VFE +
Sbjct: 330 LGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
E+N V +I G+A +ELF +K S + I F F LLS C
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMD-MKSSGYN----IDDFTFTSLLSTCA 439
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C + DL G Q+H + I N++VG++L+ +Y++C L DA ++FE M +R+
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
V+ II + Q+ +LF
Sbjct: 495 VTWNTIIGSYVQDENESEAFDLF 517
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C + ++ G Q HC I G N Y G +L+ +Y++C + DA RVFE + + N
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 177 VSRTVIIAGFAQ 188
V T + +G+ +
Sbjct: 227 VCWTCLFSGYVK 238
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L A+S+C + L G Q+H AIT+G I V V +SL++LY +C + D+ R+F EM
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
R+ VS T +++ +AQ R ++LF +++ + TL +IS
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 104 QELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD 163
Q L +D + +CG + G Q H I T F ++YVGS+LI +Y +C L
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
A VF+ M ++NVVS T ++ G+ Q R + +++F
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+CG + G H L++ TGFI+NV+VG++L+++YSRC L DA +VF+EM +VVS
Sbjct: 136 ACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS 195
Query: 179 RTVIIAGFAQEWRVDMCLELF 199
II +A+ + + LE+F
Sbjct: 196 WNSIIESYAKLGKPKVALEMF 216
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 87 SNLATLRTTTEMSSVIEQELGV--DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIAN 144
+ L + EM S + E G D L + + C S G Q HC A+T+ I N
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 145 VYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
++VG+ L+ +Y++C ++ +A VF M ++VVS ++AG++Q R + + LF
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIA-NVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
+ + G D+ G H L + TG + +V++GSSL+ +Y +C+ DA +VF+EMP RN
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 270
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI----HTLLSIIS 215
VV+ T +IAG+ Q D + +F LK + TL S++S
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 101 VIEQELGVDVC----FLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYS 156
V E+ L DV LS +S+C L+ G + HC I N G++LI LY
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYV 352
Query: 157 RCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISH 216
+C L +A VFE + E+NV + T +I GFA +LF+ L + +
Sbjct: 353 KCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSP-----NE 407
Query: 217 FPFLVLLSHCT 227
F+ +LS C
Sbjct: 408 VTFMAVLSACA 418
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 114 SHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE 173
S A+ +C + L G H +A ++NV+VGS+LI +Y++C + +A+RVF+ MPE
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549
Query: 174 RNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+N+VS +I G+A R C E L Y + + + F +LS C I
Sbjct: 550 KNLVSWKAMIMGYA---RNGFCREAL--KLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C ++ L G Q H L + +V+VG+SL+ +Y++C + D +VF+ M RN
Sbjct: 291 LKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNT 350
Query: 177 VSRTVIIAGFAQEWRVDMCLELF----HPHLKYSIHTLLSII 214
V+ T IIA A+E + + LF HL + T++SI+
Sbjct: 351 VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSIL 392
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+CGS L G + H I NVY+GS+L+ LY +C DA+ V +++P R+VVS
Sbjct: 394 ACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS 453
Query: 179 RTVIIAG 185
T +I+G
Sbjct: 454 WTAMISG 460
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 9/106 (8%)
Query: 103 EQELGVDVCFLSHAVS------SCGSKRDLYG---GVQYHCLAITTGFIANVYVGSSLIS 153
E+ + VD LS+ +S C S ++YG G Q HCLA+ GF ++++ +SL+
Sbjct: 233 EKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLE 292
Query: 154 LYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+Y++ + A +F EMPE NVVS ++I GF QE+R D +E
Sbjct: 293 IYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFL 338
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD-AYRVFEEM 171
L+ +S+C D G++ H +A+ TG N++VG++L+S+Y++C + D RVFE +
Sbjct: 141 LASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL 200
Query: 172 PERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ N VS T +I G A+E +V +++F
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMF 228
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS + + ++R G Q H + GF +NV+VGS+L+ LY+R L+ DA VF+ +
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
RN VS +IAG A+ + LELF L+ SHF + L C+
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP-----SHFSYASLFGACS 273
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 74 EDMLENSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYH 133
ED + S P SN LRT++ + + + D F + + C + L G H
Sbjct: 28 EDSEDESLKFP--SNDLLLRTSS--NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVH 83
Query: 134 CLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVD 193
+ + F ++ +G++L+++Y++C L +A +VFE+MP+R+ V+ T +I+G++Q R
Sbjct: 84 AHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPC 143
Query: 194 MCLELFHPHLKYS 206
L F+ L++
Sbjct: 144 DALLFFNQMLRFG 156
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
V++ + D LS + +CG ++ G H A+ T +++VYVGSSL+ +Y R
Sbjct: 99 VVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGK 158
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ + RVF EMP RN V+ T II G R L F
Sbjct: 159 IDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYF 197
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ +S G+ + GG Q H LA+ G N V SSLI++YS+C + +A +F E
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
++VS T +I G+A+ + ++LF LK F+ +L+ CT
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRP-----DSVTFISVLTACT 523
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+ +C R + G H I GF+ + V +SL ++Y+ C + D +FE M ER+
Sbjct: 215 ALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERD 274
Query: 176 VVSRTVIIAGFAQ 188
VVS T +I + +
Sbjct: 275 VVSWTSLIVAYKR 287
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
CG + +L G + H L + +GF +++ + L ++Y++C + +A +VF+ MPER++VS
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 180 TVIIAGFAQEWRVDMCLELF----HPHLKYSIHTLLSIISHFPFLVLLS 224
I+AG++Q M LE+ +LK S T++S++ L L+S
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+ +C DL G H L++ G NV V +SLIS+Y +C + A +F ++ R
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPH----LKYSIHTLLSIISHFPFLVLLSHCTRI 229
+VS +I GFAQ R L F +K T +S+I+ L + H I
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+ +C S D++ G Q H A G+ ++++V S+LI +YS C L DA +VF+E+P+RN
Sbjct: 82 AIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN 141
Query: 176 VVSRTVIIAGF 186
+VS T +I G+
Sbjct: 142 IVSWTSMIRGY 152
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
AVS G+ R G H I G +V VG+S+I +Y +C + A + F+ M +N
Sbjct: 296 AVSHSGALRI---GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKN 352
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
V S T +IAG+ LELF + + ++ F+ +L+ C+
Sbjct: 353 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP-----NYITFVSVLAACS 399
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
++SC L G Q H L + + ++++VGSSL+ +Y++ + +A +FE +PER+V
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 177 VSRTVIIAGFAQEWRVDMCLELFH----PHLKYSIHTLLSIISHFPFLVLLSH 225
VS T IIAG+AQ + LE+FH + + T S+++ L LL H
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++C KR L G + H I T ++ Y+ + L+ Y +C L DA +V +EMPE+NV
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTR 228
VS T +I+ ++Q L +F ++ + F F +L+ C R
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSD-----GKPNEFTFATVLTSCIR 165
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q HC + + +SLI +YS+C L A R+F+ MPER +S ++ G+++
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332
Query: 189 EWRVDMCLELF-----HPHLKYSIHTLLSIIS 215
LELF +K TLL+++S
Sbjct: 333 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 92 LRTTTEMSSVIEQELGVD--VCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGS 149
L T TEM +ELGVD V LS+ S L G++ H LAI G +V++ +
Sbjct: 199 LSTFTEM-----RELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKT 253
Query: 150 SLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
SL+ +Y +C +G A RVF+E+ ER++V +IAG A R L LF
Sbjct: 254 SLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLF 303
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
DV ++ + C R + G + HC A+ F+ NV + +SL+ +YS+C + R+F
Sbjct: 417 DVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLF 476
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ + +RNV + T +I + + + +E+F
Sbjct: 477 DRLEQRNVKAWTAMIDCYVENCDLRAGIEVF 507
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S +S+CG D + HCL++ T N+YVG++L+ LY++C ++ DA +VFE M
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSII 214
+++ V+ + ++AG+ Q + L L+ + S+ TL S+I
Sbjct: 225 DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS + +C + L G Q H + +GF +NV+V SS + +Y++C L ++Y +F E+
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 325
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH-------TLLSIISH 216
E+N+ II+GFA+ R + LF + +H +LLS+ H
Sbjct: 326 EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 376
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ S + RD+ G Q HC A+ G +NV+VGS++++ Y + + L DA R F++ + NV
Sbjct: 100 IGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHF 217
VS T +I+G+ ++ + L LF + S+ T ++I F
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGF 200
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
+S+C R G+Q H L + G+ +++V +SL+ Y+ C L A +VF+EM ERN
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN 199
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF 199
VVS T +I G+A+ ++LF
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLF 223
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+SSC R++ G H + GF + + ++LI +Y +C A+R+F+ M +
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIIS 215
VV+ I+AG+ + VD E F + +I + +IIS
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S + +CG+ +DL G Q+H VYVG+++I +Y +C + A +VF+EMP
Sbjct: 152 FSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP 211
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFH 200
ER+V+S T +IA +A+ ++ ELF
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFE 239
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
+S+C R G+Q H L + G+ +++V +SL+ Y+ C L A +VF+EM ERN
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN 199
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF 199
VVS T +I G+A+ ++LF
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLF 223
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+SSC R++ G H + GF + + ++LI +Y +C A+R+F+ M +
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIIS 215
VV+ I+AG+ + VD E F + +I + +IIS
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
AVS+C + + G + H +A+ GFI +V VG+SL+ +YS+C L DA +VF+ + ++
Sbjct: 358 AVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF----HPHLKYSIHTLLSIISHF 217
V + +I G+ Q ELF +L+ +I T ++IS +
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H L I G+ NVYVGSSL+ +Y++C + DA+ F+E+ E N VS +IAGF Q
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 105 ELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDA 164
E+ VD S + SC L G Q H LA +GF++N +V SSLI +YS+C ++ A
Sbjct: 403 EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESA 462
Query: 165 YRVFEEMPER-NVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLL 223
+ F+++ + + V+ +I G+AQ + L+LF ++ + H F +L
Sbjct: 463 RKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVK-----LDHVTFTAIL 517
Query: 224 SHCT 227
+ C+
Sbjct: 518 TACS 521
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGF 186
HC AI G I+++YV + ++ Y + LG A +F+EMP+R+ VS +I+G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGY 76
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
+I+ L D +S+ + C S L G Q H L I G+ + ++L+ +Y +C
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFL 220
+ + +F+ M ER+VVS T II GF Q RV+ FH + I + FL
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEP-----NKVTFL 548
Query: 221 VLLSHC 226
LLS C
Sbjct: 549 GLLSAC 554
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%)
Query: 108 VDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRV 167
+D+ ++ + CG + G I G NV++ +++IS+Y LL DA++V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 168 FEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL 203
F+EM ERN+V+ T +++G+ + + + +EL+ L
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRML 98
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 109 DVCF----LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDA 164
D+CF LS A+ C + +L G+Q H L + +G+ + VGS L+ L++ + DA
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDA 396
Query: 165 YRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISH 216
+++F +P +++++ + +I G + + LF +K + I+S+
Sbjct: 397 HKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSN 448
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + +G ++ +GSSL+ +Y++C + DA RVF++M E+NV S T +I G+ +
Sbjct: 292 GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGK 351
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ LELF ++ I ++ FL LS C+
Sbjct: 352 NGNPEEALELFTRMKEFRIEP-----NYVTFLGALSACS 385
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q HC I GF+ +V VG+SL+ Y + + D +VF+EM ERNVV+ T +I+G+A+
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 189 EWRVDMCLELF 199
D L LF
Sbjct: 172 NSMNDEVLTLF 182
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP-ERNVVS 178
C + ++L Q HC + GF+ + + ++L+ YS+C + DA R+F+E+ NVVS
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 179 RTVIIAGFAQ----EWRVDMCLELFHPHLKYSIHTLLSIISHFPFL 220
T +I+GF Q E VD+ E+ ++ + T I++ P +
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ SC L G HC A+ +GF + YV ++L++ YS+C + A +VF+ MPE+++
Sbjct: 114 IKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSI 173
Query: 177 VSRTVIIAGFAQEWRVDMCLELFH 200
V+ +++GF Q D +++F+
Sbjct: 174 VAWNSLVSGFEQNGLADEAIQVFY 197
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C + G H I+ G NV +G++LI+LYSRC +G A VF++M E NV
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 177 VSRTVIIAGFAQEWRVDMCLELFH 200
+ T +I+ + +ELF+
Sbjct: 275 AAWTAMISAYGTHGYGQQAVELFN 298
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H I +G + NV+ GS L+ +Y++C + DA +VFEEMP+RN VS +I+ A
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHAD 530
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
+ + F ++ + +S L SHC
Sbjct: 531 NGDGEAAIGAFAKMIESGLQP--DSVSILGVLTACSHC 566
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q HC A+ + ++VG+SL+ +Y++C + +A +F+ +P+R VS T +I+G+ Q
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ 429
Query: 189 EWRVDMCLELF 199
+ L+LF
Sbjct: 430 KGLHGAGLKLF 440
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIA 184
D G Q H L++TTGF + VG+ ++ YS+ + + +F+EMPE + VS V+I+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 185 GFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLS 224
++Q + + L F + + +FPF +LS
Sbjct: 325 SYSQADQYEASLHFFR-----EMQCMGFDRRNFPFATMLS 359
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q HC ++ TG ++ + LI +Y++C LG A R+F+ M R+VVS + +I G+AQ
Sbjct: 492 GSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQ 551
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ L LF I +H F+ +L+ C+ +
Sbjct: 552 SGFGEEALILFKEMKSAGIEP-----NHVTFVGVLTACSHV 587
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C S R L G + H + + + + + ++S+Y +C L DA VF+ MPERN+
Sbjct: 74 ICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNL 133
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
VS T +I G++Q + + L+ L+ + + F F ++ C
Sbjct: 134 VSYTSVITGYSQNGQGAEAIRLYLKMLQEDL-----VPDQFAFGSIIKACA 179
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H L I + N G SL +Y+RC L A RVF+++ + S VIIAG A
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 189 EWRVDMCLELF 199
D + +F
Sbjct: 349 NGYADEAVSVF 359
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
+++++L D + +C S D+ G Q H I +++ ++LI++Y R
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
+ DA RVF +P ++++S + IIAGF+Q
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQ 246
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 100 SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 159
++ EQ+L +D L+ ++ CG+ G Q HC A+ G+ +++ +G+SLIS+Y++C
Sbjct: 511 TLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCC 570
Query: 160 LLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF----HPHLKYSIHTLLSIIS 215
DA ++F M E +V+S +I+ + + D L L+ +K I TL +IS
Sbjct: 571 DSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVIS 630
Query: 216 HFPF 219
F +
Sbjct: 631 AFRY 634
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSR--CALLGDAYRVFEEMPERNVVSRTVIIAGF 186
G+Q H L + +GF+ +V+V +SL+SLY + + D ++F+E+P+R+V S +++
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 187 AQEWRVDMCLELFHPHLKYSIHTLLSI-ISHFPFLVLLSHCT 227
+E + +LF Y ++ + + F LLS CT
Sbjct: 260 VKEGKSHKAFDLF-----YEMNRVEGFGVDSFTLSTLLSSCT 296
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 98 MSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSR 157
+S + E+ELGV + +S + + G Q H + G N V ++LIS+YS+
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 158 CALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHF 217
C + A RVF M RNV+S T +I GFA+ LE F+ ++ + +
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP-----NEV 576
Query: 218 PFLVLLSHCTRI 229
++ +LS C+ +
Sbjct: 577 TYVAILSACSHV 588
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALLGDAYRV 167
D ++ + +C D+ G H +I GF +A+V+V +SLI +YS+ + A+RV
Sbjct: 225 DCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRV 284
Query: 168 FEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH 208
F+E RN+VS I+AGF R D LE+FH ++ ++
Sbjct: 285 FDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVE 325
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
+++C DL H +AI I ++ VG+S++ Y++C + A R F+++ E+N
Sbjct: 433 LNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKN 492
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
++S TVII+ +A D L LF +K +T ++ +L LS C
Sbjct: 493 IISWTVIISAYAINGLPDKALALF-DEMKQKGYTPNAV----TYLAALSAC 538
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 112 FLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEM 171
FL AV++ D+ G H + I +GF + +YV +SL+ LY+ C + AY+VF++M
Sbjct: 126 FLIKAVTTMA---DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 172 PERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
PE+++V+ +I GFA+ + + L L+ I F + LLS C +I
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP-----DGFTIVSLLSACAKI 235
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 59 SAYDIKNRRSHLRLI--EDMLENSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHA 116
SAY + ++ L+ ++ A N G L TEM+S + G + L
Sbjct: 174 SAYKVFDKMPEKDLVAWNSVINGFAEN--GKPEEALALYTEMNSKGIKPDGFTIVSL--- 228
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C L G + H I G N++ + L+ LY+RC + +A +F+EM ++N
Sbjct: 229 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
VS T +I G A +ELF +++ + L I+ L SHC +
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELF-KYMESTEGLLPCEITFVGILYACSHCGMV 340
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 106 LGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAY 165
LG D LS +C + L G+Q + LAI + +V V ++ I +Y +C L +A+
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 166 RVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSH 225
RVF+EM R+ VS IIA Q + L LF L+ I F F +L
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEP-----DEFTFGSILKA 492
Query: 226 CT 227
CT
Sbjct: 493 CT 494
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H I ++VY+ S+L+ +YS+C L D+ +FE+ R+ V+ +I G+A
Sbjct: 622 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 681
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ + ++LF + +I +H F+ +L C +
Sbjct: 682 HGKGEEAIQLFERMILENIKP-----NHVTFISILRACAHM 717
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
C D G+Q H + + G +V S+L+ +Y++ ++ RVF+ +PE+N VS
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 180 TVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSI 213
+ IIAG Q + + L+ F K + SI
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ S L G + H + I GF+++VYV +SLISLY + DA +VFEEMPER++
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 177 VSRTVIIAGF 186
VS +I+G+
Sbjct: 197 VSWNSMISGY 206
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G H A+ GF+ ++ + ++LI +Y C L A +F+ M E+NV+S IIA + Q
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 189 EWRVDMCLELFH 200
+ LELF
Sbjct: 409 NGKNYSALELFQ 420
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
+V LS +++ C DL+ G Q HC+A+ GF+++ + + L+ +Y +C + A +F
Sbjct: 280 NVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIF 339
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+P ++VVS T +I +A LE+F + L + ++ FLV++S C
Sbjct: 340 RAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVT---FLVVISACA 395
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIA 184
D+ G H + I +GF + +YV +SL+ LY+ C + AY+VF++MPE+++V+ +I
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 185 GFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
GFA+ + + L L+ I F + LLS C +I
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKP-----DGFTIVSLLSACAKI 102
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 59 SAYDIKNRRSHLRLI--EDMLENSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHA 116
SAY + ++ L+ ++ A N G L TEM+S + G + L
Sbjct: 41 SAYKVFDKMPEKDLVAWNSVINGFAEN--GKPEEALALYTEMNSKGIKPDGFTIVSL--- 95
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C L G + H I G N++ + L+ LY+RC + +A +F+EM ++N
Sbjct: 96 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 155
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
VS T +I G A +ELF +++ + L I+ L SHC +
Sbjct: 156 VSWTSLIVGLAVNGFGKEAIELF-KYMESTEGLLPCEITFVGILYACSHCGMV 207
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
++E E+ D + + +CG+ + G H + +G V+V SSL +Y +C +
Sbjct: 164 MLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGV 223
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH 208
L DA +VF+E+P+RN V+ ++ G+ Q + + + LF K +
Sbjct: 224 LDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Query: 117 VSSCGSKRDLYGGV----QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
VS+C S GGV Q H +AI G + +G+SL++ Y + L+ A VF+ M
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 173 ERNVVSRTVIIAGFAQEWRVD----MCLELFHPHLKYSIHTLLSIIS 215
E++VV+ +II+G+ Q+ V+ MC + LKY TL +++S
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%)
Query: 124 RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVII 183
R + G + HCLA+ GF+ +VYV +SLI LYSR +G+A +F+EMP R++ S +I
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223
Query: 184 AGFAQEWRVDMCLELFHPHLKYSIHTLLSIIS 215
+G+ Q L L + T++S++S
Sbjct: 224 SGYCQSGNAKEALTLSNGLRAMDSVTVVSLLS 255
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 35/149 (23%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEE-- 170
L A+ SC S D+ G Q HC + +G +N Y+ +S++++Y++C LL DA VF +
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 171 -----------------------------MPERNVVSRTVIIAGFAQEWRVDMCLELFHP 201
MPER+ VS T +I G+AQ + +ELF
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 202 HLKYSIH----TLLSIISHFPFLVLLSHC 226
I TL ++IS L + C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDC 192
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ +S+C ++ LAI V+V ++L+ +Y C L DA ++F+EMP
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
ERN+V+ V++ G+++ ++ ELF
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELF 262
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 64 KNRRSHLRLIEDMLENSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSK 123
KN + +I +EN G + ++ V +G+ + C
Sbjct: 269 KNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL-------ILMGCARF 321
Query: 124 RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVII 183
DL GG HC A+ GFI ++ V +++IS Y++ L DA+R F E+ ++V+S +I
Sbjct: 322 GDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLI 381
Query: 184 AGFAQEWRVDMCLELFH----PHLKYSIHTLLSIISHFPFLVLLSH 225
G R + LFH ++ I TLL +++ L L H
Sbjct: 382 TGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGH 427
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C R + G H + F ++YV ++L+ Y++C L A +VF+EMP+R++
Sbjct: 110 LKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDM 169
Query: 177 VSRTVIIAGFA 187
V+ +I+GF+
Sbjct: 170 VAWNAMISGFS 180
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D+ L +++C L G H + G+ N + ++L+ +Y++C L A RVF
Sbjct: 408 DITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVF 467
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
+ M +R++VS ++ GF L LF+ + ++ TLL+I+S
Sbjct: 468 DTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILS 518
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%)
Query: 100 SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 159
+++E+ + + LS A+ C L G Q H + + +V +SLIS+Y +C
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 160 LLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
LGDA+++FE M +++VV+ +I+G+AQ D L LF + I
Sbjct: 334 ELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKI 381
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q H I GF ++V+VG+ +I+ Y++C + A +VF+EM ER+VVS +I+G++Q
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG 212
Query: 191 RVDMCLELFHPHL 203
+ C +++ L
Sbjct: 213 SFEDCKKMYKAML 225
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIA 184
+L GG + H AI G N+YV +S+I Y++ L A RVF+ +R++++ T II
Sbjct: 381 NLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIIT 440
Query: 185 GFAQEWRVDMCLELF 199
+A D LF
Sbjct: 441 AYAVHGDSDSACSLF 455
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C S L G Q + GF +VYVG++LI LY C DA +VF+EM ERNV
Sbjct: 120 LKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNV 179
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
VS I+ + ++++ E F
Sbjct: 180 VSWNSIMTALVENGKLNLVFECF 202
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q HC + GF +VYV + LI LY C L A +VF+EMPER++VS +I +
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 189 EWRVDMCLELF 199
D L+LF
Sbjct: 230 FGEYDSALQLF 240
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G H L + +G++ +V V SSL+ +Y++ L ++ +VF+EMPER+V S +I+ F Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 189 EWRVDMCLELF 199
+ LELF
Sbjct: 186 SGEAEKALELF 196
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ A+S+C L G + H + GF + YV S+L+ +Y +C L A VF++MP
Sbjct: 211 LTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFH 200
+++V+ +I G+ + C+E+ +
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILN 298
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+ +C + L G Q H G + + ++L+S+YSRC + AY+VF M ERN
Sbjct: 223 ALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERN 282
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH-------TLLSIISH 216
VVS T +I+G A +E F+ LK+ I LLS SH
Sbjct: 283 VVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSH 330
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 114 SHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE 173
S A+ C DL GG+Q H + GF+++ + ++L+ LYS C DA +VF+E+P+
Sbjct: 117 SFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK 176
Query: 174 RNVVSRTVIIAGFAQEWRVDMCLELF 199
R+ VS V+ + + + R L LF
Sbjct: 177 RDTVSWNVLFSCYLRNKRTRDVLVLF 202
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D S V +C + + G Q HC I + + + V SSL+ +Y++C LL A VF
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHF 217
+ + +N +S T +++G+A+ R + LELF ++++ ++IS F
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGF 212
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 63 IKNRRSHLRLIEDMLENSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGS 122
+KN S LI +++ G L TEM E+ +D LS V +C +
Sbjct: 199 VKNLYSWTALISGFVQS------GKGLEAFSVFTEMRR--ERVDILDPLVLSSIVGACAN 250
Query: 123 KRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVI 182
G Q H L I GF + V++ ++LI +Y++C+ + A +F M R+VVS T +
Sbjct: 251 LAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSL 310
Query: 183 IAGFAQEWRVDMCLELFHPHLKYSI 207
I G AQ + + L L+ + + +
Sbjct: 311 IVGMAQHGQAEKALALYDDMVSHGV 335
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
SCG+ +D+ G H L + +GF + + +SL+++Y RC+L+ D+ RVF+ + N VS
Sbjct: 276 SCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS 335
Query: 179 RTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
T +I+G Q R +M L F ++ SI
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSI 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS A+ C + G Q H + GF + Y GS LI LY +C A VF+ +
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS 430
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSII 214
E +V+S +I +AQ L+LF + + T+LS++
Sbjct: 431 EVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVL 476
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 117 VSSCGSKRDLY-GGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
V++CG ++ GVQ H +G +++VYV ++++ LY L+ + +VFEEMP+RN
Sbjct: 48 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 107
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF 199
VVS T ++ G++ + + ++++
Sbjct: 108 VVSWTSLMVGYSDKGEPEEVIDIY 131
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%)
Query: 100 SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 159
S+I V+ + A+++C + G H L + +G N +G++L+S+Y +
Sbjct: 335 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 394
Query: 160 LLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH 200
+ ++ RV +MP R+VV+ +I G+A++ D L F
Sbjct: 395 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 435
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 117 VSSCGSKRDLY-GGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
V++CG ++ GVQ H +G +++VYV ++++ LY L+ + +VFEEMP+RN
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 124
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF 199
VVS T ++ G++ + + ++++
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIY 148
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%)
Query: 100 SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 159
S+I V+ + A+++C + G H L + +G N +G++L+S+Y +
Sbjct: 352 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 411
Query: 160 LLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH 200
+ ++ RV +MP R+VV+ +I G+A++ D L F
Sbjct: 412 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 452
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
+ L D ++ ++C L G+Q H I TG + NV+VGSSLI LYS+C L
Sbjct: 469 DDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPE 528
Query: 163 DAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
A +VF M N+V+ +I+ +++ ++ ++LF+ L I
Sbjct: 529 MALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGI 573
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
SC +Y G+Q H GF A++YV + ++ +Y++ +G A F+EMP R+
Sbjct: 85 TKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE 144
Query: 177 VSRTVIIAGFAQEWRVDMCLELFH--PHLK 204
VS T +I+G+ + +D+ +LF PH+K
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPHVK 174
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGF--IANVYVGSSLISLYSRCALLGDAYRVFEEMPER 174
+ SC S DL G H I TGF + + +G ++ LY+ +GDA +VF+EM ER
Sbjct: 109 LKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIG--VVELYTSGGRMGDAQKVFDEMSER 166
Query: 175 NVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTR 228
NVV ++I GF V+ L LF + SI + S+IS LS C R
Sbjct: 167 NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISS------LSKCGR 214
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D ++ +S+C + DL GV+ H LAI I+ V V ++LI++YS+C + A +F
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 169 EEMPERNVVSRTVIIAGF 186
+P +NV+S T IIAG
Sbjct: 457 HNIPRKNVISWTSIIAGL 474
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
DV + +CG DL G + H + G+ ++ V ++LI++Y +C + A +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
+ MP R+++S +I+G+ + LELF S+ TL S+IS
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%)
Query: 98 MSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSR 157
++S+ E + VD V C KR G + + +A+++ V +G++ ++++ R
Sbjct: 82 LNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVR 141
Query: 158 CALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL 203
L DA+ VF +M ERN+ S V++ G+A++ D + L+H L
Sbjct: 142 FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 115 HAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEE--MP 172
H + +C L G H GF A+V+V + LI+LY++C LG A VFE +P
Sbjct: 124 HLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 183
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIISHFPFL 220
ER +VS T I++ +AQ LE+F K + L+S+++ F L
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H L I F N +V + LI++YS+C L D+ VF MP+RN VS +IA FA+
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
L+L+ + TL + FL LL C+ +
Sbjct: 436 HGHGLAALKLYE-----EMTTLEVKPTDVTFLSLLHACSHV 471
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 88 NLATLRTTTEMSSVIEQELGVD-----------------VCFLSHAVSSCGSKRDLYGGV 130
N+ TL T +S +IE EL D V +LS A+++C + + G
Sbjct: 220 NVITL--TAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLS-ALAACSGSQRIVEGQ 276
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q H L G + + + S+L+ +YS+C + DA+ +FE E + VS TVI+ G AQ
Sbjct: 277 QIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNG 336
Query: 191 RVDMCLELFHPHLKYSIHTLLSIIS 215
+ ++ F L+ + +++S
Sbjct: 337 SEEEAIQFFIRMLQAGVEIDANVVS 361
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++CG+ R L G + H IT G +NV V SSL+ +Y +C + +A +VF M ++N
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
VS + ++ G+ Q + +E+F
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIF 354
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS AV +C ++ G +H + IT GF N ++ S+L LY DA RVF+EMP
Sbjct: 166 LSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMP 225
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHP 201
E +V+ T +++ F++ + L LF+
Sbjct: 226 EPDVICWTAVLSAFSKNDLYEEALGLFYA 254
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
++ + +C S L G Q H I GF V +GS+L ++YS+C L D VF P
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
++VVS +I+G + + D LELF L + T ++IIS
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIIS 532
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H L + ++YV +SL+ +Y + L+ D +VF MPERN + + +++G+A
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 189 EWRVDMCLELFHPHLK 204
RV+ +++F+ L+
Sbjct: 197 RGRVEEAIKVFNLFLR 212
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYG-GVQYHCLAITTGFIANVYVGSSLISLYSRCALL 161
E+E G D ++ AV S + G G Q HC+ I G + V + ++L+++YS+C L
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 162 GDAYRVFEEMPERNVVSRTVIIAGFAQEWR----VDMCLELFHPHLKYSIHTLLSIIS 215
+A ++F+ +RN ++ + ++ G++Q V + +F +K S +T++ +++
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLN 330
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C + L G Q HCL++ G NVYV +LI++Y+ C + A VF+ + E V
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 177 VSRTVIIAGFAQEWRVDMCLELFH----PHLKYSIHTLLSIISHFPFL 220
V +I G+A+ R + L LF +LK + TLLS++S L
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL 243
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 132 YHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWR 191
+H I G N++V + L++LY + +GDAY +F EMP RN +S V+I GF+QE+
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 192 VDMCLELFH 200
+ +++F
Sbjct: 240 CESAVKIFE 248
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++C + + G+Q H L I GF+ YV +SLI+ Y+ C +GD+ +VF+E V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
T +++G++ + + L +F L+ SI
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSI 322
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+ ++SC + L G + H +A+ G + +VG+SL+ +YS + DA VF ++
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF 388
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKY-------SIHTLLSIISHFPFL 220
++++VS II G AQ R +F ++ + LLS SH FL
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C + G + H A G + ++VG+ L+S+Y +C L +A V +EM R+V
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 206
Query: 177 VSRTVIIAGFAQEWRVDMCLEL 198
VS ++ G+AQ R D LE+
Sbjct: 207 VSWNSLVVGYAQNQRFDDALEV 228
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIA 184
DL G+ H A+ G I +V V +SL+S+YS+C L A ++F + +R+VVS + +IA
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 185 GFAQEWRVDMCLELFHP----HLKYSIHTLLSII 214
+ Q + D + LF H+K + TL S++
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVL 408
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
E+ + D + A+ +C D G++ H L G ++VY+G++L+ +Y + L
Sbjct: 93 EKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLV 152
Query: 163 DAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHP 201
A +VF++M ++VV+ +++G AQ L LFH
Sbjct: 153 SARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHD 191
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 117 VSSCGSKRDLYGGVQYHCLAIT-TGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
VS+C + G H L + GF N VG+S + YS+C L DA VF+EMP+R+
Sbjct: 132 VSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRD 191
Query: 176 VVSRTVIIAGFAQ 188
VV+ T II+G Q
Sbjct: 192 VVAWTAIISGHVQ 204
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ SC + G Q H + G ++YV +SLIS+Y + L DA++VF++ P R+V
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
VS T +I G+A ++ +LF
Sbjct: 201 VSYTALIKGYASRGYIENAQKLF 223
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
VS+C + G Q H GF +N+ + ++LI LYS+C L A +FE +P ++V
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLK 204
+S +I G+ L LF L+
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLR 360
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 79 NSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAIT 138
NS N + S+ + + SS++ +L D + +C S + L G+ H +
Sbjct: 15 NSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLV 74
Query: 139 TGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
GF ++ Y+ SSL++LY++ LL A +VFEEM ER+VV T +I +++
Sbjct: 75 NGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSR 124
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
++S G+ DL G HC + TGF ++++ ++LI++Y +C +YRV E +P ++
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKD 310
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLK 204
VV TV+I+G + R + L +F L+
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C S L G HC+ I + V ++L+ +YS+C L A R F+ + ++V
Sbjct: 455 LQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDV 514
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
VS ++IAG+ + D+ LE++ L + +H FL +LS C+
Sbjct: 515 VSWGILIAGYGFHGKGDIALEIYSEFLHSGMEP-----NHVIFLAVLSSCS 560
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
++ V+SC G H + G+ + +SLI++Y++C L + +FE M
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLE-LFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
ER++VS II+G+AQ VD+C L +K+ + + F + LL C+
Sbjct: 409 ERDLVSWNAIISGYAQ--NVDLCKALLLFEEMKFKT---VQQVDSFTVVSLLQACS 459
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
H A+ GF ++ V +S+++LY +C +GDA +F++M +R++VS +I+G+A +
Sbjct: 167 HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNM 226
Query: 193 DMCLELFH 200
L+L +
Sbjct: 227 SEILKLLY 234
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 56/101 (55%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ C R L G + H T+GF+ + + + L+ +Y++C L DA +VF+EMP R++
Sbjct: 92 IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHF 217
S V++ G+A+ ++ +LF + ++ ++++ +
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGY 192
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H GF + SSL+ +Y++C + A V + P+ ++VS T +I G AQ
Sbjct: 338 GKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQ 397
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ D L+ F LK H F+ +LS CT
Sbjct: 398 NGQPDEALKYFDLLLKSGTKP-----DHVTFVNVLSACT 431
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 58/107 (54%)
Query: 93 RTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLI 152
+ T ++++ + D L++AVS+C + L G Q H A +GF +++ ++L+
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 153 SLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+LYSRC + ++Y FE+ + ++ +++GF Q + L +F
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 680
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S +S+C L G Q H L + GF ++ YV ++L+SLY L A +F M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
+R+ V+ +I G +Q + +ELF
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELF 377
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
AV + ++ G Q H + TG+ + V ++LIS+Y++C + DA + F E+ +N
Sbjct: 698 AVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN 757
Query: 176 VVSRTVIIA-----GFAQEWRVDMCLELFHPHLKYSIHTLLSIIS 215
VS II GF E +D ++ H +++ + TL+ ++S
Sbjct: 758 EVSWNAIINAYSKHGFGSE-ALDSFDQMIHSNVRPNHVTLVGVLS 801
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C D+ G+ H L + TG + +V+VG++L+S Y + DA ++F+ MPERN+
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 177 VSRTVII-----AGFAQE 189
VS +I GF++E
Sbjct: 254 VSWNSMIRVFSDNGFSEE 271
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
++E+ + D +S +S+C L G + H + GF+ +VY+GS+L+ +YS+C
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
L A VF +P++N+ II G A L++F
Sbjct: 1083 LERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMF 1121
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 115 HAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPER 174
+ + +C RD+ G H + TGF N+YV + L+ +Y C + RVFE++P+
Sbjct: 112 YVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW 171
Query: 175 NVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRIL 230
NVV+ +I+GF R +E F + +I+ LV C I+
Sbjct: 172 NVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIM--VDLLVACGRCKDIV 225
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIA--------NVYVGSSLISLYSRCALLGDAYRVFEE 170
+CG +D+ G +H GF NV + +SLI +Y++C L A +F+
Sbjct: 217 ACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDG 276
Query: 171 MPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSII 214
MPER +VS II G++Q + L +F L I T LS+I
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVI 324
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D + + SC L +H I GF +N ++G+SL+ LYSRC LG+A +VF
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYS-----IHTLLSIISHFPFLVLL 223
+ ++ V T +I G+ + LE F+ +K S T LSI+S L+
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 224 SHCTRIL 230
RI
Sbjct: 485 HEGLRIF 491
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C + DL G + H LAI G V V ++L+ +Y +C +AY VF +P ++V
Sbjct: 271 LQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDV 330
Query: 177 VSRTVIIAGF 186
VS +I+GF
Sbjct: 331 VSWVALISGF 340
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 116 AVSSCGSKRDLYGGVQYHCLA---ITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
A+ +CG R++ G H +T G +++YVGSSLI +Y +C + +A R+F+E+
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGRMIEALRMFDELE 123
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ ++V+ + +++GF + +E F + S T + L+S CT++
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVT----PDRVTLITLVSACTKL 176
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
E ++ D + +C D G + + GF ++++VG++L+ +YSR LL
Sbjct: 99 ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLT 158
Query: 163 DAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH 200
A +VF+EMP R++VS +I+G++ + LE++H
Sbjct: 159 RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 80 SASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITT 139
SA G L+ TT+M + E+ D+ + C S G + HC +
Sbjct: 482 SACVRFGDFATGLQVTTQMR---KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 140 GFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
G+ + + +G++LI +YS+C L ++ RVFE M R+VV+ T +I + + LE F
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETF 598
Query: 200 HPHLKYSI 207
K I
Sbjct: 599 ADMEKSGI 606
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGF 186
G H +I G ++V VGSSLIS+Y +C + A +VF+EMPERNV + +I G+
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGY 122
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G++ H L I TGF++ VG+S I+LY++ L DA + FE++ R ++S +I+GFAQ
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 189 EWRVDMCLELF 199
L++F
Sbjct: 451 NGFSHEALKMF 461
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D S A+S C G+Q + TG +++ VG+S I++YSR A RVF
Sbjct: 173 DAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVF 232
Query: 169 EEMPERNVVSRTVIIAGFAQE 189
+EM ++++S +++G +QE
Sbjct: 233 DEMSFKDMISWNSLLSGLSQE 253
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 100 SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 159
++ + + +D + +++C + DL Q H L I G+ + + VG+ L+S YS+C
Sbjct: 266 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG 325
Query: 160 LLGDAYRVFEEMPERNVVSRTVIIA 184
+L VF +M ERNVVS T +I+
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTMIS 350
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 108 VDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFI--ANVYVGSSLISLYSRCALLGDAY 165
D S +S+C S +L G H L I +G+ A+V VG+S+IS+YS+C A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 166 RVFEEMPERNVVSRTVIIAGFA 187
VFEE+ R+V+S I+ GFA
Sbjct: 347 TVFEELVCRDVISSNAILNGFA 368
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G H +A+ + ++V+V +SLI Y C L A +VF + E++VVS +I GF Q
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ D LELF + SH + +LS C +I
Sbjct: 210 KGSPDKALELFKKMESEDVKA-----SHVTMVGVLSACAKI 245
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D ++ +++ G +L G++ H I G+ +N+ VG++LI +YS+C L R F
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 444
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
M +++++S T +IAG+AQ LELF
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+CG + G Q H + GF ++YV +SL+ Y C +A +VF EMP R+VVS
Sbjct: 115 ACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVS 174
Query: 179 RTVIIAGFAQEWRVDMCLELF-----HPHLKYSIHTLLS 212
T II GF + L+ F P+L + L+S
Sbjct: 175 WTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVS 213
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIA 184
D+ G + H I G ++VY+GSSL+ +Y++ A + D+ RVF + R+ +S ++A
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 185 GFAQEWRVDMCLELF 199
G+ Q R + L LF
Sbjct: 317 GYVQNGRYNEALRLF 331
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S + +C L+ G Q H + GF +N+++ S+L+ +YS+C + A ++F+ M
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ VS T II G A + LF + + + F+ +L+ C+ +
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP-----NQVAFVAVLTACSHV 457
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S A+ SC G QYH + GF +++ G++LI++Y++C ++ +A +VF MP
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
+ VS +IA Q ++++ LK I TLL++++
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G+ H L + GF +V +SL+S+YS L DA+++F+E+P+R+VV+ T + +G+
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 189 EWRVDMCLELFHPHLKYSI 207
R ++LF ++ +
Sbjct: 190 SGRHREAIDLFKKMVEMGV 208
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+SSC S L G L F+ N+++ ++LI +Y++C + + VF+EM E+++
Sbjct: 320 LSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
V I+G A+ V + +F K I
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
C + + G H L + GF +V VG+S + Y +C L A +VF EMPERN VS
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSW 179
Query: 180 TVIIAGFAQEWRVDMCLELF 199
T ++ + + ++ +F
Sbjct: 180 TALVVAYVKSGELEEAKSMF 199
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S V SC RD+ G + H I TGF N VGSSL LYS+C +A +F +
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 173 ERNVVSRTVIIAGF--AQEWR 191
+ +S T++I+ A++WR
Sbjct: 187 NADTISWTMMISSLVGARKWR 207
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+ + L G HC ++ +GF V +SL+ +YS+C L DA +VFEE+ +V
Sbjct: 535 ISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDV 594
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
VS +++G A + L F FL+LLS C+
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMRMKETEP-----DSVTFLILLSACS 640
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 114 SHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRC-ALLGDAYRVFEEMP 172
S +S C + R L G Q H I GF + VG++L+ +Y +C A +A RVF M
Sbjct: 329 SAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMV 388
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH 208
NVVS T +I G V C L +K +
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL 203
NV ++++S Y R L A +F+EMPERNVVS +I G+AQ R+D LELF
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 204 KYSIHTLLSII 214
+ +I + S++
Sbjct: 168 ERNIVSWNSMV 178
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D LS +S+CGS L G Q A N+YV + L+ +Y +C + +A RVF
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 392
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
E MP +N + +I +A + L LF
Sbjct: 393 EAMPVKNEATWNAMITAYAHQGHAKEALLLF 423
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+C ++ G H G +V++ SLI +Y++C +G A ++F+E+ ER+ VS
Sbjct: 141 ACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVS 200
Query: 179 RTVIIAGFAQEWRVDMCLELF 199
+I+G+++ ++LF
Sbjct: 201 WNSMISGYSEAGYAKDAMDLF 221
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 52 NLVSPKKSAYDIKNRR--SHLRLIEDMLE------NSASNPVGSNLATLRTTTEMSSVIE 103
N V A+ +KN+R S ++ ++M E NS N SN + + ++
Sbjct: 230 NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 104 QELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD 163
+ +D+ + + C R + G H + + F ++L+ +YS+C L
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI----HTLLSIISHFPF 219
A VF EM +R+VVS T +IAG+A+E ++LF + I +T+ ++++
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 220 LVLLSHCTRI 229
LL R+
Sbjct: 410 YRLLDEGKRV 419
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 98 MSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSR 157
MSS +E +D S S S R ++GG Q H + +GF VG+SL++ Y +
Sbjct: 187 MSSGVE----MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 158 CALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH-TLLSIISH 216
+ A +VF+EM ER+V+S II G+ + L +F L I L +I+S
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 217 FP 218
F
Sbjct: 303 FA 304
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S + +CG L G+Q H + GF V VG+SL+ +YS+C + +A +VF +
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
+R+++S +IAGF L+ F
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTF 196
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGF--IANVYVGSSLISLYSRCALLGDAYRVFEE 170
L+ + +C S +Y G Q H + +GF ++ + SL+ LY +C L A + F++
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 272
Query: 171 MPERNVVSRTVIIAGFAQEWRVDMCLELFH--PHLKYSIHT--LLSIISHFPFLVLLSHC 226
+ E+ ++S + +I G+AQE + LF L I + L SII F LL
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 227 TRI 229
++
Sbjct: 333 KQM 335
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q HC + +G N+ + LI +Y +C AY+VF+ MPERNVVS + +++G
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
+ L LF + I+ + F F L C
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYP-----NEFTFSTNLKAC 117
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
SC + L G + H AI +V VGS+L+ +Y++C L + +VF+++P++NV++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 179 RTVIIAGFA 187
VII +
Sbjct: 586 WNVIIMAYG 594
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 124 RDLYGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVI 182
+D+ G Q H G+ + +V V ++L++LY +C G Y+VF+ + ERN VS +
Sbjct: 111 QDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSL 170
Query: 183 IAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
I+ + +M LE F L ++ TL+S+++
Sbjct: 171 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 207
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 79 NSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAIT 138
NS +N N T+ T + + +L D LS +S+C S L G Q A
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478
Query: 139 TGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLEL 198
G ++ V SSLI LY +C + RVF+ M + + V +I+G+A + ++L
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDL 538
Query: 199 FHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
F K S+ + + F+V+L+ C
Sbjct: 539 FK---KMSVAGIRP--TQITFMVVLTACN 562
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPER-- 174
+ SC + + GV H + N +VG+SLI LYS+C L A +VF+EM +R
Sbjct: 223 IKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282
Query: 175 ---NVVSRTVIIAGFAQE 189
N + R + + GF QE
Sbjct: 283 SCYNAMIRGLAVHGFGQE 300
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
C DL Q H +A+ G + +V V ++L+ +Y +C L+ + R+FEE+ E++VVS
Sbjct: 121 CAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSW 180
Query: 180 TVIIAGFAQEWRVDMCLELFH 200
TV++ + ++ E+FH
Sbjct: 181 TVVLDTVVKWEGLERGREVFH 201
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPER-NVVSRTVIIAGFAQE 189
+ H LA GF ++ YVGS L++ YS+ + DA +VF+E+P+R + V ++ G++Q
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 190 WRVDMCLELF----HPHLKYSIHTLLSIISHF 217
+R + L +F + S HT+ S++S F
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAF 272
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 126 LYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
+Y G Q H A+ G + N +V LI +YS+C + DA FE MPE+ V+ +IAG
Sbjct: 240 IYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAG 299
Query: 186 FA 187
+A
Sbjct: 300 YA 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q H I GF + + ++L+ YS+ + A VF+++P +N++S ++ G+A
Sbjct: 346 QAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHG 405
Query: 191 RVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
R ++LF + ++ +H FL +LS C
Sbjct: 406 RGTDAVKLFEKMIAANVAP-----NHVTFLAVLSACA 437
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 107 GVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALLGDAY 165
G+ C++ + C R +Y G Q H L + +G+ I+N++V + L+ YS C L +
Sbjct: 213 GLTYCYM---IRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSM 269
Query: 166 RVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSH 225
R F +PE++V+S I++ A V L+LF + S PF+ L+
Sbjct: 270 RSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRP-----SIRPFMSFLNF 324
Query: 226 CTR 228
C+R
Sbjct: 325 CSR 327
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G+Q HC I+ GF N++V S+L+ LY+ L+ A ++F+EM +RN+ +++ F Q
Sbjct: 131 GIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQ 190
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C + + G Q H LAI GF +V+ ++L+ LY +C +VF++MP R++
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 177 VSRTVIIAGFAQEWRVD 193
VS T ++ G ++D
Sbjct: 186 VSWTTMLYGLVSNSQLD 202
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
++++E+ + S +S+ S DL G+Q H + + ++ V +SL+S+Y +C
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGN 488
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFP-- 218
DAY++F + E N+VS +I+G++ L+LF ++L P
Sbjct: 489 TNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLF---------SMLESSGKEPNG 539
Query: 219 --FLVLLSHCTRI 229
FL LLS C +
Sbjct: 540 VTFLALLSACVHV 552
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++C S GVQ HC + +GF N+YV S+LI +Y++C + A + E M +V
Sbjct: 234 LTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
Query: 177 VSRTVIIAGFAQEWRVDMCLELF----HPHLKYSIHTLLSIISHFPF 219
VS +I G ++ + L +F +K T+ SI++ F
Sbjct: 294 VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFAL 340
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
HCL + TG+ V ++L+ +Y++ ++ A +VFE M E++V+S T ++ G
Sbjct: 352 HCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSY 411
Query: 193 DMCLELF 199
D L+LF
Sbjct: 412 DEALKLF 418
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 119 SCGSKRDLYGGV--QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+C +R+L G+ +H L+ + NV + + LI++Y++C + A +VF+ MPERNV
Sbjct: 68 ACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNV 127
Query: 177 VSRTVIIAGFAQ 188
VS T +I G+ Q
Sbjct: 128 VSWTALITGYVQ 139
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
+++L D S + +C + H I GF+A+ + +SLI Y++C L
Sbjct: 362 QEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLD 421
Query: 163 DAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVL 222
RVF++M R+VVS ++ ++ +VD L +F K I+ F+ L
Sbjct: 422 LCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQ---KMDINP-----DSATFIAL 473
Query: 223 LSHCT 227
LS C+
Sbjct: 474 LSACS 478
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G++ H ++ ++V VGS+L+ +YS+C L A R F MP RN S +I+G+A+
Sbjct: 638 GMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYAR 697
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ + L+LF +K T H F+ +LS C+
Sbjct: 698 HGQGEEALKLFET-MKLDGQT---PPDHVTFVGVLSACS 732
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + GF +VYV +SL+ +Y+ C + A R+F +M R+VVS T ++AG+ +
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 189 EWRVDMCLELFH--PH 202
V+ E+F PH
Sbjct: 196 CGMVENAREMFDEMPH 211
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 75 DMLENSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAV-----------SSCGSK 123
D++ S +P + ++L + + Q +GV SH + C
Sbjct: 70 DLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL 129
Query: 124 RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVII 183
G Q HC++ +G + +V S+ +Y RC +GDA +VF+ M +++VV+ + ++
Sbjct: 130 SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALL 189
Query: 184 AGFAQEWRVDMCLE 197
+A++ CLE
Sbjct: 190 CAYARKG----CLE 199
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+CG+ L G H A+ + NV+VGS+LI +Y++C + + VF MP +N+V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 179 RTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
++ GF+ + + +F ++ + F LLS C ++
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKP-----DFISFTSLLSACGQV 502
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+C D G Q H AI I + Y S+LI++YS+C L DA VFE M ++V+
Sbjct: 396 ACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVA 455
Query: 179 RTVIIAGFAQEWRVDMCLELFHPHLKYSIH-------TLLSIISHFPFLVLLSHC 226
T I+G A L LF + + +L+ SH + HC
Sbjct: 456 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHC 510
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D S + +C S +L G Q H G + V VG+ L+ Y +C+ A R F
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAF 343
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+E+ E N VS + II+G+ Q + + ++ F K SI++ F + + C+
Sbjct: 344 QEIREPNDVSWSAIISGYCQMSQFEEAVKTF----KSLRSKNASILNSFTYTSIFQACS 398
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 118 SSCGSKRDLYGGVQYHCLAITTGFIAN--VYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
S+C S L G H ++ GF+A+ V+VG++L+ Y++C A +F+ + E+N
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLK 204
++ + +I G+ ++ LELF LK
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEMLK 539
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 94 TTTEMSSVIEQELGVDV---CF-LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGS 149
+ E S+ ++ GV++ C ++ +S CG +L G H L+I G I + V +
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVAN 381
Query: 150 SLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH 200
+L+ +Y++C DA VFE E+++V+ II+GF+Q + L LFH
Sbjct: 382 ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFH 432
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D+ F S A+ +C +DL G + HC + NV V + L+ +Y++C + A++VF
Sbjct: 142 DIVF-SKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVF 199
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLE 197
++ RNVV T +IAG+ + D+C E
Sbjct: 200 NDITLRNVVCWTSMIAGYVKN---DLCEE 225
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 102 IEQELGVD-VCF----LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYS 156
I +++GV +C+ +S A+S+C + G H I ++VY S+LI +Y+
Sbjct: 529 IFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYA 588
Query: 157 RCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYS 206
+C L A VF+ M E+N+VS IIA ++ L LFH ++ S
Sbjct: 589 KCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 638
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S C SK + GVQ H L + +G + +SL+S+YS+C DA ++F M +
Sbjct: 246 LSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADT 305
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSI-------HTLLSIISHFPFLVLLSHCTRI 229
V+ +I+G+ Q ++ L F+ + + +LL +S F L +C +I
Sbjct: 306 VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN---LEYCKQI 362
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFI-ANVYVGSSLISLYSRCALL 161
+ L +D L V +CG+ G H ++I FI + Y+ +S+I +Y +C LL
Sbjct: 203 DTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLL 262
Query: 162 GDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
+A ++FE +RNVV T +I+GFA+ R +LF L+ SI
Sbjct: 263 DNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 111 CFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEE 170
C L+ + SC S L G H I G + +S I +Y+RC + A VF+
Sbjct: 313 CTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDM 372
Query: 171 MPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
MPERNV+S + +I F + L+ FH ++ + + F+ LLS C+
Sbjct: 373 MPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNV-----VPNSVTFVSLLSACS 424
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 107 GVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYR 166
GVD L A+ +C L G+ H LA+ G + YV SL+ +Y++ + A +
Sbjct: 106 GVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQK 165
Query: 167 VFEEMPERNVVSRTVIIAGF 186
VF+E+P RN V V++ G+
Sbjct: 166 VFDEIPVRNSVLWGVLMKGY 185
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 114 SHAVSS----CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFE 169
SHAV+S CG ++ G H A+ G VYV + L+ LYSR + A + F+
Sbjct: 104 SHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFD 163
Query: 170 EMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
++ E+N VS ++ G+ + +D +F
Sbjct: 164 DIAEKNTVSWNSLLHGYLESGELDEARRVF 193
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 106 LGVDVCFLSHAVSSCGSK-RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDA 164
L +D S A+ SC + R + GG H ++ + F++N +VG +L+ +Y +C + A
Sbjct: 44 LPLDAHVFSLALKSCAAAFRPVLGG-SVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHA 102
Query: 165 YRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH 200
++F+E+P+RN V +I+ + +V +EL+
Sbjct: 103 RKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 114 SHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE 173
S + SC D+ HC I G ++V+V S+LI ++++ DA VF+EM
Sbjct: 166 SSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 174 RNVVSRTVIIAGFAQEWRVDMCLELF 199
+ + II GFAQ R D+ LELF
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELF 248
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 117 VSSCGSKRDLYGGVQYHC-LAITTG-FIANVYVGSSLISLYSRCALLGDAYRVFEEMPER 174
+SS G+ +L G HC +A TT + ++ + +SL+S+Y++C + DAY +F +M ++
Sbjct: 473 LSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK 532
Query: 175 NVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ VS +I G + D L LF L + FL +LS C+
Sbjct: 533 DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKP-----NSVTFLGVLSACS 580
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
E + VD LS + +C + GG+Q H TG +++++ + LI LY +C LG
Sbjct: 114 ENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLG 173
Query: 163 DAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ ++F+ MP+R+ VS +I G+ + + ELF
Sbjct: 174 LSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELF 210
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q H GF++N + +SL+ Y L DA++VF+EMP+ +V+S +++G+ Q
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 191 RVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
R + LF +H + F F L+ C R+
Sbjct: 136 RFQEGICLF-----LELHRSDVFPNEFSFTAALAACARL 169
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 143 ANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH 200
NV VG+ LI +Y +C + DA VF+ M E++ VS I+A ++ ++++ L FH
Sbjct: 190 GNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFH 247
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Query: 86 GSNLATLRTTTEMSSVIEQELG-VDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIAN 144
G + LR +M E+E G ++ S A+S+C L G Q H + G+
Sbjct: 388 GHSFEALRLFVQM----EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 145 VYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH---- 200
+VG++L+ +Y +C + +A +F+EM +++VS +IAG+++ ++ L F
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 201 PHLKYSIHTLLSIIS 215
LK T+++++S
Sbjct: 504 EGLKPDDATMVAVLS 518
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 100 SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIA-NVYVGSSLISLYSRC 158
+I + +D +S + C + + G Q H A+ + I +V +G+SLI +Y++
Sbjct: 306 DMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKS 365
Query: 159 ALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF----HPHLKYSIHTLLSII 214
+ DA FEEM E++V S T +IAG+ + + ++L+ H +K + T LS++
Sbjct: 366 GEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLL 425
Query: 215 S 215
S
Sbjct: 426 S 426
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 135 LAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDM 194
L + GF+ NV+V ++ IS+Y+RC L A VF+ MP +++VS T +I + ++
Sbjct: 282 LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEI 341
Query: 195 CLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
L LF +K I ++ F+++LS C+
Sbjct: 342 GLMLFDDMIKRGIRPDGAV-----FVMVLSACS 369
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C L G H L +T F +++YV ++LI +Y++C + +A R+F+ M ++N
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
V+ +I+G+ + L +F+ L I
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 124 RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVII 183
++L G+Q H LA TG ++ YV + ISLYS+C + +F E + ++V+ +I
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 184 AGFAQEWRVDMCLELF 199
G+ ++ L LF
Sbjct: 295 HGYTSNGETELSLSLF 310
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
++ +E D+ + +SC + L G H AI G ++ ++ IS+YS+
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSED 306
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYS----IHTLLSIIS 215
A +F+ M R VS TV+I+G+A++ +D L LFH +K + TLLS+IS
Sbjct: 307 TCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
H I + F ++V+VG++ + ++ +C + A +VFE MPER+ + +++GF Q
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 193 DMCLELF 199
D LF
Sbjct: 135 DKAFSLF 141
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFI-ANVYVGSSLISLYSRCALLGDAYRV 167
D+ L +S CG L G A G NV + ++LI +YS+C + +A +
Sbjct: 356 DLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDI 415
Query: 168 FEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
F+ PE+ VV+ T +IAG+A L+LF + +H FL +L C
Sbjct: 416 FDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKP-----NHITFLAVLQACA 470
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 99 SSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRC 158
+I +++ D + + +C S L G C A+ G+ +V+V SS+++LY +C
Sbjct: 105 DQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKC 164
Query: 159 ALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ +A +F +M +R+V+ T ++ GFAQ + +E +
Sbjct: 165 GKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFY 205
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+C + L G + H + I +N+ V S+L+ +Y +C+ D +RVF+++ RNV++
Sbjct: 218 ACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVIT 277
Query: 179 RTVIIAGFAQEWRVDMCLELFH 200
T +I+G+ +V L+ F
Sbjct: 278 WTSLISGYGYHGKVSEVLKCFE 299
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIA 184
D G + H +A+ GF+ + + S I+LY + +A +VF+E PER + S II
Sbjct: 132 DFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIG 191
Query: 185 GFAQEWRVDMCLELF 199
G R + +E+F
Sbjct: 192 GLNHAGRANEAVEMF 206
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 118 SSCGSKRDLYGGVQYH--CLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
+SCG DL Q H L T +++ + +SLI +Y +C + A +FEEM +RN
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN 285
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
VVS + +I G+A LE F ++ + + F+ +LS C
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMREFGVRP-----NKITFVGVLSAC 331
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ S G R + G + H A+ G + YV +SL+ +Y+ + ++VF+EMP+R+V
Sbjct: 53 LKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDV 112
Query: 177 VSRTVIIAGFAQEWRVDMCLELF-----HPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
VS +I+ + R + + +F +LK+ T++S +S L L RI
Sbjct: 113 VSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERI 170
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
SC L G H A GF+ V ++LI +YS+C ++ A ++F +M ++V+S
Sbjct: 250 SCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVIS 309
Query: 179 RTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ +I+G+A +E F+ + + + FL LLS C+ +
Sbjct: 310 WSTMISGYAYHGNAHGAIETFNEMQRAKVKP-----NGITFLGLLSACSHV 355
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 23 INQIFRPFSFQKLTPRRENKELANAPRILNLVSPKKSAYDIKNRRSHLRLIEDM-----L 77
+ F PF Q++ R E K++ NA I++ +S +S++ + IEDM L
Sbjct: 9 VENYFIPF-LQRVKSRNEWKKI-NASIIIHGLS--QSSFMVTKMVDFCDKIEDMDYATRL 64
Query: 78 ENSASNP-VGSNLATLRTTTEMS------SVIEQELGV-----DVCFLSHAVSSCGSKRD 125
N SNP V + +R T S + +Q L D SC S
Sbjct: 65 FNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGS 124
Query: 126 LYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
Y G Q H G +V ++LI +Y + L DA++VF+EM ER+V+S +++G
Sbjct: 125 CYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSG 184
Query: 186 FAQEWRVDMCLELFHPHLKYSIHTLLSIISHF 217
+A+ ++ LFH L +I + ++IS +
Sbjct: 185 YARLGQMKKAKGLFHLMLDKTIVSWTAMISGY 216
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S A+ +C S + GVQ H LAI T V V +SLI +Y++C + A VF EM
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511
Query: 173 ERNVVSRTVIIAGFA 187
+V S +I+G++
Sbjct: 512 TIDVASWNALISGYS 526
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS ++ C + G Q H L + GF ++YV ++LI +Y++C + A ++F E+
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
+N VS +I G+ +F L+ +
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQV 445
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
C ++ G+Q HCL + G ++ + +SL+ Y +C L+ +A RVFE + +R++V
Sbjct: 152 CTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLW 211
Query: 180 TVIIAGFAQEWRVDMCLELF 199
+++ + +D L
Sbjct: 212 NALVSSYVLNGMIDEAFGLL 231
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q + +GF +VYVG+ LI Y + + A VF+ +PE++ V+ T +I+G +
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 191 RVDMCLELFHPHLK-------YSIHTLLSIISHFPFL 220
R + L+LF+ ++ Y + T+LS S PFL
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL 265
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
++ V++ G+ + G ++HC + G N Y+ ++L+ +Y++C DA++ F+
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAA 617
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
R+VV +I+ +A L++ + I ++ F+ +LS C+
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP-----NYITFVGVLSACS 667
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D+ S ++SC S L G Q H I + YV +SLI +Y++C L DA +VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 169 EEMPERNVVSRTVIIAGFAQ---EWRVDMCLELF 199
+ +VV +I G+++ +W + L +F
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
++E + D LS +S+C L GG Q H + G + + + LI Y +C
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
+ A+++F MP +N++S T +++G+ Q +ELF K+ +
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+ + SCG DL Q HC + G+ NV + +S++ +Y +C ++ DA RVF+E+
Sbjct: 165 FAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIV 224
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI----HTLLSII 214
+ VS VI+ + + D + +F L+ ++ HT+ S++
Sbjct: 225 NPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVM 270
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 100 SVIEQEL-GVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRC 158
+++ QE+ +D L ++ C D+ G Q H G+ NV V ++L+ +Y +C
Sbjct: 384 TLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKC 443
Query: 159 ALLGDAYRVFEEMPE-RNVVSRTVIIAGFAQEWRVDMCLELFHPHL------KYSIHTLL 211
L A F +M E R+ VS ++ G A+ R + L F KY++ TLL
Sbjct: 444 GTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLL 503
Query: 212 SIISHFPFLVL 222
+ ++ P L L
Sbjct: 504 AGCANIPALNL 514
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE-RN 175
V++C + L G Q H GF NV + ++LI +Y++C + D+ RVF E+ + RN
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
+VS T ++ G+ +ELF + I F+ +LS C
Sbjct: 380 LVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRP-----DRIVFMAVLSAC 425
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
++E+ L + ++ +S+C L G++ H + G + +G++L+ +Y++C
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFL 220
L A VF M ++++S T +I G+A R ++ F + YS ++ FL
Sbjct: 344 LDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFR-QMMYSGEKPDEVV----FL 398
Query: 221 VLLSHC 226
+L+ C
Sbjct: 399 AVLTAC 404
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
VS+C + L H + GF++++ +G++LI +Y++C L A VF E+ E+++
Sbjct: 360 VSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDL 419
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
VS + +I + LE+F +K + FL +LS C
Sbjct: 420 VSWSSMINAYGLHGHGSEALEIFKGMIKGGHE-----VDDMAFLAILSACN 465
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++C R L Q H + GF++NV + S+I Y++C + A R F+EM +++
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
T +I+G+A+ ++ +LF
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLF 268
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+S GS L G H A +G + +GS+LI +YS+C ++ A VFE +P N
Sbjct: 283 AISRLGS---LELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 176 VVSRTVIIAGFA 187
V++ + +I GFA
Sbjct: 340 VITWSAMINGFA 351
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP-ERNVVSRTVIIAGFA 187
G+Q H + + T I +V V ++LI++YSRC + ++ R+F+EM +R V++ +I G+A
Sbjct: 428 GMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYA 486
Query: 188 QEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
L LF I+ SH F+ +L+ C
Sbjct: 487 FHGNASEALNLFGSMKSNGIYP-----SHITFVSVLNACA 521
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q HC+A+ G + V +SLI++Y + G A VF+ M ER+++S +IAG AQ
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 189 EW----RVDMCLELFHPHLKYSIHTLLSII 214
V + ++L LK +T+ S++
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+C + R+ G H L + GF ++++V S+L+ +Y L A ++F++MP R+ V
Sbjct: 143 ACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVL 202
Query: 179 RTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSII 214
T + G+ Q+ + L +F + YS L S++
Sbjct: 203 YTAMFGGYVQQGEAMLGLAMFR-EMGYSGFALDSVV 237
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
CG + G H +A +G + V ++LIS YS+CA LG A +F EM +++ VS
Sbjct: 161 CGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSW 220
Query: 180 TVIIAGFA----QEWRVDMCLELFHPHLKYSIHTLLSI----ISHFPFLVLLSHCTRI 229
+I ++ QE + + +F +++ S T++++ +SH P L+ C +
Sbjct: 221 NTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMV 278
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D ++ + SC D G + H I G ++ V S+LI +YS+C LL A +F
Sbjct: 307 DCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLF 366
Query: 169 EEMPERNVVSRTVIIAGFA 187
+PE+N+VS +I G
Sbjct: 367 AGIPEKNIVSFNSLILGLG 385
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
E L +D + A+ CG + DL G H L + G V++ + LI +YS+C L
Sbjct: 141 EANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLD 200
Query: 163 DAYRVFEEMPERNVVSRTVIIAGF----AQEWRVDMCLELFHPHLKYSIHTLLSII 214
A +F+ ER+ VS +I+G+ A E +++ ++ L + + L S++
Sbjct: 201 QAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVL 256
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G HCL + + ++ ++ SSLI +YS+ +G+A +VF ++ E+++V +I+G+A
Sbjct: 136 GKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYAN 195
Query: 189 EWRVDMCLEL 198
+ D L L
Sbjct: 196 NSQADEALNL 205
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 131 QYHCLAITTGFIAN-VYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQE 189
Q H LAI + +N + V ++LISLY + L DA VF+ MPE N VS +I G+AQ
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 190 WRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
L L+ L I + I+ L +HC ++
Sbjct: 426 GHGTEALLLYQRMLDSGIAP--NKITFVAVLSACAHCGKV 463
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 122 SKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTV 181
++RDL+ G H L + + ++ Y+ + ++LYS+C L A F E NV S V
Sbjct: 20 AERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNV 79
Query: 182 IIAGFAQEWRVDMCLELF 199
I+ +A++ ++ + +LF
Sbjct: 80 IVKAYAKDSKIHIARQLF 97
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 99 SSVIEQELGV--DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYS 156
S ++E E+ + D LS +S C S L G Q H + G +G++LI++YS
Sbjct: 476 SCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYS 535
Query: 157 RCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
+C + ++ VF +M E++VVS +I+ +++
Sbjct: 536 QCGTIQNSLEVFNQMSEKDVVSWNSLISAYSR 567
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S A+++ RD G Q HC AI +G + + +V ++L+SLY R L + F+E+
Sbjct: 60 VSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEID 119
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
E +V S T +++ + ++ E+F
Sbjct: 120 EPDVYSWTTLLSASFKLGDIEYAFEVF 146
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 79 NSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAIT 138
NS + N T +T ++EQ + + ++ + +C + G Q H +I
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 139 TGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLEL 198
NV+V S+L+ +YS+ + A +F + ERN V+ T +I G+ Q + + L
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 199 FHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
F + I F+ +LS C+
Sbjct: 610 FLSMQESGIKP-----DAITFVAVLSACS 633
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 124 RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVII 183
R L G Q HC A+ G ++++VG++LI +Y C + A +VF+EM + N+V+ +I
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+SSC G Q H AI G + V V SSLIS+YS+C LGDA + F E + +
Sbjct: 199 LSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE 258
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
V + +I+ + + D +ELF+ + + I+ FL LL C+
Sbjct: 259 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNME----INEVAFLNLLYACS 305
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 101 VIEQELGVDVCF--LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRC 158
++ Q+ GV F L +S C S L+ G Q H + F +VYV S L+++Y +C
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 159 ALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
L + +F+ P ++++ II+G+A + L++F
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVF 420
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 119 SCGSKR--DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+C +K+ DL HC A+ G +++++ ++LI +YS A + A ++F+E P+R+V
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV 183
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
V+ V+I G + + ELF + + S+IS + ++HC
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGY---AQMNHC 230
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 49/83 (59%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
VSSC DL G +++ G + + ++L+ ++S+C + +A R+F+ + +R +
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI 323
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
VS T +I+G+A+ +D+ +LF
Sbjct: 324 VSWTTMISGYARCGLLDVSRKLF 346
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+S+C L G H ++ NV V + LI +YS+C L +A VF + P ++
Sbjct: 265 ALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKD 324
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFH 200
+V+ +IAG+A L LF+
Sbjct: 325 IVAWNAMIAGYAMHGYSQDALRLFN 349
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 131 QYHCLAITTGFIANV---YVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFA 187
Q H L +T G A Y ++LIS+Y RC L A +VF++MP RNVVS + + ++
Sbjct: 115 QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS 174
Query: 188 Q 188
+
Sbjct: 175 R 175
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
CG +DL G H L + V ++L+++Y +C + +A VF+ M R+V++
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITW 287
Query: 180 TVIIAGFAQEWRVDMCLEL 198
T +I G+ ++ V+ LEL
Sbjct: 288 TCMINGYTEDGDVENALEL 306
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP-ERNVVSRTVIIAGFA 187
G Q H A+ +G I +V V ++LI++Y++ + A R F+ + ER+ VS T +I A
Sbjct: 432 GKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALA 491
Query: 188 QEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
Q + LELF L + H ++ + S CT
Sbjct: 492 QHGHAEEALELFETMLMEGLRP-----DHITYVGVFSACT 526
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 140 GFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
GF ++VYV ++L+ +Y + DA++VF+EMPERN V+ V+I G
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITG 198
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%)
Query: 99 SSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRC 158
S +++ D L+ ++ C S L G + H + G + +GS+L+++YS+C
Sbjct: 540 SEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKC 599
Query: 159 ALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
L A +V++ +PE + VS + +I+G++Q
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQ 629
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+++C + L G+ H ++ F NV V +SLI LY RC + A +VF M +R
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 176 VVSRTVIIAGFA 187
VVS +I GFA
Sbjct: 272 VVSWNSVIVGFA 283