Miyakogusa Predicted Gene

Lj0g3v0121009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0121009.1 CUFF.7205.1
         (153 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06470.2 | Symbols:  | Nucleotide/sugar transporter family pr...   165   1e-41
AT1G06470.1 | Symbols:  | Nucleotide/sugar transporter family pr...   165   1e-41

>AT1G06470.2 | Symbols:  | Nucleotide/sugar transporter family
           protein | chr1:1970726-1973540 FORWARD LENGTH=414
          Length = 414

 Score =  165 bits (417), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 95/151 (62%)

Query: 1   MSYVSPVMXXXXXXXXXXXDPWEEFQENEYFNNSRHITRSFLLMIFGGTLAFFMVLTEYX 60
           MS V+PVM           DPW EF++N+YF++  H  R+  LM+FGG LAF MVLTEY 
Sbjct: 262 MSCVAPVMAIATGLLSLLLDPWSEFRDNKYFDSGAHFARTCFLMLFGGALAFCMVLTEYV 321

Query: 61  XXXXXXXXXXXXXXXXKEAVTILVAVLYFHDEFTWLKGFGLLTIIFGVSLFNWYKYQKLQ 120
                           KEAVTI+VAV YFHDEFTWLKG GL+ I+ GVSLFNWYKY KLQ
Sbjct: 322 LVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQ 381

Query: 121 KGHVGDSAAEQHTRDSAAKYVILEEMDEQDD 151
           KGH  +   +        KYVIL+EMD+Q++
Sbjct: 382 KGHKTEEEKQLQAPSQTGKYVILDEMDDQEN 412


>AT1G06470.1 | Symbols:  | Nucleotide/sugar transporter family
           protein | chr1:1970726-1973540 FORWARD LENGTH=414
          Length = 414

 Score =  165 bits (417), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 95/151 (62%)

Query: 1   MSYVSPVMXXXXXXXXXXXDPWEEFQENEYFNNSRHITRSFLLMIFGGTLAFFMVLTEYX 60
           MS V+PVM           DPW EF++N+YF++  H  R+  LM+FGG LAF MVLTEY 
Sbjct: 262 MSCVAPVMAIATGLLSLLLDPWSEFRDNKYFDSGAHFARTCFLMLFGGALAFCMVLTEYV 321

Query: 61  XXXXXXXXXXXXXXXXKEAVTILVAVLYFHDEFTWLKGFGLLTIIFGVSLFNWYKYQKLQ 120
                           KEAVTI+VAV YFHDEFTWLKG GL+ I+ GVSLFNWYKY KLQ
Sbjct: 322 LVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQ 381

Query: 121 KGHVGDSAAEQHTRDSAAKYVILEEMDEQDD 151
           KGH  +   +        KYVIL+EMD+Q++
Sbjct: 382 KGHKTEEEKQLQAPSQTGKYVILDEMDDQEN 412