Miyakogusa Predicted Gene

Lj0g3v0120679.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0120679.2 Non Chatacterized Hit- tr|I3SA77|I3SA77_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.96,0,Translin,Translin; seg,NULL; TRANSLIN ASSOCIATED FACTOR
X,NULL; TRANSLIN AND TRANSLIN ASSOCIATED PRO,CUFF.7179.2
         (194 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G03780.1 | Symbols:  | Translin family protein | chr2:1152716...   281   2e-76

>AT2G03780.1 | Symbols:  | Translin family protein |
           chr2:1152716-1154285 REVERSE LENGTH=287
          Length = 287

 Score =  281 bits (719), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 134/181 (74%), Positives = 151/181 (83%)

Query: 14  MRDSFAKYAQYLNDLNEKRERVVKASRDVTMNSKKVIFQVHRMSKYNKLEVLEKAEKDLA 73
           M+D+F+ YA YLN+ NEKRERVVK SRD+TMNSKKVIFQVHR+SK NK EVLEKA KDL 
Sbjct: 50  MKDAFSTYADYLNNFNEKRERVVKVSRDITMNSKKVIFQVHRLSKDNKEEVLEKAGKDLE 109

Query: 74  AVRDQHISRLVRELQGTDFWKLRRAYSPGIQEYVEAATFCSFCTSGTLLKLDEINNTXXX 133
           AVRDQH +RL++ELQGTDFWKLRRAYSPG+QEYVEAATF  FC SGTL  LDEIN T   
Sbjct: 110 AVRDQHFARLMKELQGTDFWKLRRAYSPGVQEYVEAATFYKFCLSGTLCTLDEINTTLVP 169

Query: 134 XXXXXXXXXXINILDYLLGLADLTGELMRLAIGRISDGEIQFAEKICRFVRDIYRELTLV 193
                     INILDY+LGLADLTGELMR+AIGRISDGEI+FA++IC+FVR I+REL LV
Sbjct: 170 LSDPSLEPLQINILDYILGLADLTGELMRMAIGRISDGEIEFAQRICQFVRQIHRELMLV 229

Query: 194 V 194
           V
Sbjct: 230 V 230