Miyakogusa Predicted Gene
- Lj0g3v0120649.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0120649.1 tr|D7MJ85|D7MJ85_ARALL Binding protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493946
PE=4,47.73,5e-16,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
PPR_2,P,gene.g9156.t1.1
(100 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 8e-23
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-15
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-15
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 74 2e-14
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-14
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 74 3e-14
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 73 3e-14
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-14
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 72 5e-14
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-13
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 70 4e-13
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-13
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-12
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 68 1e-12
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-12
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-12
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-12
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-12
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-12
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-12
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-11
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-11
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-11
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-11
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-11
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-11
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 63 3e-11
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-11
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-11
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 63 5e-11
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-11
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-11
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-11
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 62 8e-11
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-11
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 9e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 62 9e-11
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-11
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 62 1e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-10
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 61 2e-10
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 61 2e-10
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-10
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-10
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 60 2e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-10
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-10
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-10
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-10
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 59 5e-10
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-10
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 59 5e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-10
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-10
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 59 6e-10
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-10
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-10
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-10
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-10
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 58 1e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-09
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-09
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-09
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 57 3e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-09
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 56 5e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-09
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 56 5e-09
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-09
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-09
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-09
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-09
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-09
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-09
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-09
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-08
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-08
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 54 2e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 54 2e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 54 3e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 53 4e-08
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-08
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 5e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-08
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-08
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-08
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 6e-08
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-08
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 52 9e-08
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 52 1e-07
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 52 1e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 52 1e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-07
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 51 1e-07
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-07
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-07
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-07
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-06
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 1e-06
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-06
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 48 2e-06
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 47 2e-06
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 3e-06
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 4e-06
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 5e-06
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 6e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 6e-06
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 46 6e-06
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 101 bits (252), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFS-VMKSDLDLELNELTFISVISAC 65
A+ LFDEMP +D VSWNSL+SG+S RG LG C V S +M S++ NE+TF+S+ISAC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++EEG+ +H +K G+ +VKVVN IN Y
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWY 179
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G AQ LFDEMP ++ VSWNS++SGF + G + + +F M+ + D++ + T +S+
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ-EKDVKPDGFTMVSL 264
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ACA A E+G+++H V+ EL VV LI+MY
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMY 303
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDLDLELNELTFISVISAC 65
A L+F + +K+ WN+++ GFS+ +S+F ++ S ++ LT+ SV A
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY 136
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+G+ +H +K G+E + NT+++MY
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMY 171
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 75.5 bits (184), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FD MP K V+WNSLVSGF + G + VF M+ E + TF+S+
Sbjct: 156 GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRES-GFEPDSATFVSL 214
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SACA A G +VH + G++L VK+ LIN+Y
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FD+M + +W +++S + G + +F+ M+ D N +TF++V
Sbjct: 257 GDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAV 316
Query: 62 ISACALAKAREEGQYVH 78
+SACA A EEG+ V+
Sbjct: 317 LSACAHAGLVEEGRSVY 333
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ + + MP KD V+WN+L+S + + G + VF ++ +++LN++T +S +SACA
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A E G+++H K G+ + V + LI+MY
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMY 410
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
+F + KD VSWNS+++GF ++G + +F M+S+ D++ + +T + V+SACA +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIR 246
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
E G+ V + + + + + N +++MY
Sbjct: 247 NLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FDE+P + +WN+L+ ++ D + F M S+ N+ TF +I A A
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ GQ +H AVK + V V N+LI+ Y
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCY 176
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A +F+EMP ++ VSW +++SGF++ + C+ ++S M+ + N+ TF ++
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS-DPNDYTFTAL 227
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SAC + A +G+ VHC + +G++ + + N+LI+MY
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMY 266
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 55/98 (56%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA +FD+ NKD VSWNS+++G+++ G + +F +M + + +T++ V
Sbjct: 270 GDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGV 329
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINM 99
+S+C A +EG+ + G++ ++ + L+++
Sbjct: 330 LSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDL 367
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFS-VMKSDLDLELNELTFIS 60
G +AQ LFDE+P KD VSWN+++SG+++ G+ + +F +MK+ ++ +E T ++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT--NVRPDESTMVT 271
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+SACA + + E G+ VH G +K+VN LI++Y
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 5 PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 64
P A +F + + + WN++ G + D + + ++ M S L L N TF V+ +
Sbjct: 85 PYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS-LGLLPNSYTFPFVLKS 143
Query: 65 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
CA +KA +EGQ +H +KLG +L + V +LI+MY
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMY 179
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
LF+ +P KD +SWN+L+ G++ + +F M + N++T +S++ ACA
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSILPACAHLG 381
Query: 70 AREEGQYVHCCAVKL--GMELQVKVVNTLINMY 100
A + G+++H K G+ + +LI+MY
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 64/100 (64%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+ +F+ +PN D +SWN+++SG+++ G + ++++M+ + ++ N+ T++S
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+ AC+ A A +G +H +K G+ L V VV +L +MY
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 3 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 62
A +A++LFDEMP +D SWN+++SG+ + G+ +++ + +++ ++ +T +S++
Sbjct: 200 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA-----MDSVTVVSLL 254
Query: 63 SACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
SAC A G +H ++K G+E ++ V N LI++Y
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Score = 59.3 bits (142), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+ FD + N+D +WN ++SG+ + G+ + FS+ L + TF S
Sbjct: 99 LGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPS 158
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+ AC + +G +HC A+K G V V +LI++Y
Sbjct: 159 VLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLY 195
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A +FD MP ++ VSW++L+SG GDL +S+FS M + NE TF + + AC
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ-GIYPNEFTFSTNLKACG 118
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
L A E+G +H +K+G E+ V+V N+L++MY
Sbjct: 119 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMY 152
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ FD++ K +SW+SL+ G+++ G+ M +F ++ +L+ +++ S+I A
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ-ELNSQIDSFALSSIIGVFA 324
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+G+ + AVKL L+ V+N++++MY
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 72.4 bits (176), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+LLFD MP +D +SWN+++SG+ + G + +F M+ L ++ + +T SV
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRG-LSVDPDLMTLTSV 303
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ISAC L R G+ +H + G + + V N+L MY
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA +F +M ++ SWN LV G++K+G M ++ M ++ + TF V
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ C G+ VH V+ G EL + VVN LI MY
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ +A+ LF M KD VSW +++SG+ + + +M D ++ +E+T +V
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD-SVKPDEITVAAV 404
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SACA + G +H A+K + V V N LINMY
Sbjct: 405 LSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMY 443
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+L+FDEM +D V+W+S++ G+ KRG+ + +F M + NE+T +SV
Sbjct: 188 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I ACA A G+ VH + + + L V + +LI+MY
Sbjct: 248 ICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMY 286
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DAQ +FDEMP+++ V+W +L++G+ + M VF M D+ NE T SV+SAC
Sbjct: 258 DAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS-DVAPNEKTLSSVLSAC 316
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A A G+ VHC +K +E+ TLI++Y
Sbjct: 317 AHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLY 351
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A L+F+ + K+ +W ++++GF+ G + +F M S + NE+TF++V
Sbjct: 355 GCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS-HVSPNEVTFMAV 413
Query: 62 ISACALAKAREEGQ 75
+SACA EEG+
Sbjct: 414 LSACAHGGLVEEGR 427
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A LFD +KD V+W +++ GF + G M F MK + NE+T +SV+ A
Sbjct: 157 ASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKT-GVAANEMTVVSVLKAAG 215
Query: 67 LAKAREEGQYVHCCAVKLG-MELQVKVVNTLINMY 100
+ G+ VH ++ G ++ V + ++L++MY
Sbjct: 216 KVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMY 250
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD--LELNELTFISVISA 64
A+ LF+ M D V +NS+ G+S+ N + VFS+ L+ + + TF S++ A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSR---FTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 65 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
CA+AKA EEG+ +HC ++KLG++ V V TLINMY
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMY 174
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FD + V +N++++G+++R +S+F M+ L+ NE+T +SV+S+CA
Sbjct: 183 ARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY-LKPNEITLLSVLSSCA 241
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
L + + G+++H A K VKV LI+M+
Sbjct: 242 LLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMF 275
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ DA +F++M KD +W++++ ++ G M +F M+S+ +++ +E+TF+ +
Sbjct: 279 GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE-NVQPDEITFLGL 337
Query: 62 ISACALAKAREEGQ-YVHCCAVKLGMELQVKVVNTLINM 99
++AC+ EEG+ Y K G+ +K +++++
Sbjct: 338 LNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD-LELNELTFIS 60
G PDA L+F M KD V+W SL+SG K G + VF MK D D L+ + S
Sbjct: 422 GCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 481
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V +ACA +A G VH +K G+ L V V ++LI++Y
Sbjct: 482 VTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLY 521
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G + A+ +F +M +K ++WN ++ G+ GD +S+F MK + +++TF+S+
Sbjct: 626 GFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE-SPDDVTFLSL 684
Query: 62 ISACALAKAREEGQYV 77
ISAC + EEG+ +
Sbjct: 685 ISACNHSGFVEEGKNI 700
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 2 GATPDAQLLFDEMPNK-DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
G + DA +F E+ +K + V WN ++ GF G + + ++ + K++ ++L +F
Sbjct: 219 GLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNN-SVKLVSTSFTG 277
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC+ ++ G+ +HC VK+G+ V +L++MY
Sbjct: 278 ALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ +FD MP +D VSWN++V+ ++ G + VF+ M D + + T +SV
Sbjct: 251 GLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSV 310
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SACA + +G++VH K G+E++ + L++MY
Sbjct: 311 LSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMY 349
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ LFD MP + VSWNS+++G+S+ GD + +F M DL + +++TF+SV
Sbjct: 265 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML-DLGIAPDKVTFLSV 323
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I A + + GQ +H K G +V L+NMY
Sbjct: 324 IRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMY 362
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA +FDEMP+ D +SWNSLVSG+ + G + +F + D+ NE +F + ++AC
Sbjct: 108 DAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRS-DVFPNEFSFTAALAAC 166
Query: 66 ALAKAREEGQYVHCCAVKLGMEL-QVKVVNTLINMY 100
A G +H VKLG+E V V N LI+MY
Sbjct: 167 ARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMY 202
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 14/99 (14%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+L+F MP K+ + WN ++SG+++ GD + +F+ +K + L+ + TF+++
Sbjct: 369 GMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNL 428
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ C+ HC ++ ME+ + +IN Y
Sbjct: 429 LAVCS-----------HC---EVPMEVMLGYFEMMINEY 453
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
+A + +MPN + SWN++++G+ G F+ M S + +E + V++A
Sbjct: 272 NAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS-GVRFDEYSLSIVLAAV 330
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A G +H CA KLG++ +V V + LI+MY
Sbjct: 331 AALAVVPWGSLIHACAHKLGLDSRVVVASALIDMY 365
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G +FDEMP +D VSWN L+S + G + + VF M + +L+ +E T +S
Sbjct: 94 LGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVS 153
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SAC+ K E G+ ++ V E+ V++ N L++M+
Sbjct: 154 TLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMF 192
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A++LF+ P KD V W ++++G+ + + +F M++ + + +S+
Sbjct: 227 GRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQT-AGIRPDNFVLVSL 285
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ CA A E+G+++H + + + V L++MY
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMY 324
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A +FD+MP KD V+WNS+++GF++ G +++++ M S ++ + T +S+
Sbjct: 170 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSL 228
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SACA A G+ VH +K+G+ + N L+++Y
Sbjct: 229 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ LFDEM +K+ VSW SL+ G + G + +F M+S L E+TF+ +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 62 ISACALAKAREEGQYVHCCAVKLGME 87
+ AC+ HC VK G E
Sbjct: 331 LYACS-----------HCGMVKEGFE 345
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A +FD+MP KD V+WNS+++GF++ G +++++ M S ++ + T +S+
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSL 95
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SACA A G+ VH +K+G+ + N L+++Y
Sbjct: 96 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 134
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ LFDEM +K+ VSW SL+ G + G + +F M+S L E+TF+ +
Sbjct: 138 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 197
Query: 62 ISACALAKAREEGQYVHCCAVKLGME 87
+ AC+ HC VK G E
Sbjct: 198 LYACS-----------HCGMVKEGFE 212
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%)
Query: 11 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 70
F++M +D V+WNS++SGF++RG + +FS M D L + T SV+SACA +
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 71 REEGQYVHCCAVKLGMELQVKVVNTLINMY 100
G+ +H V G ++ V+N LI+MY
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMY 324
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
FD++P +D VSW +++ G+ G + V M + +E + T +V+++ A +
Sbjct: 102 FFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE-GIEPTQFTLTNVLASVAATR 160
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
E G+ VH VKLG+ V V N+L+NMY
Sbjct: 161 CMETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+ +F + ++D V+W +++ G+ + G G +++F M N T +
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG-GQRPNSYTLAA 418
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++S + + G+ +H AVK G V V N LI MY
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMY 458
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ LF+ MP +D ++WN+++SG+++ G+ ++VF +M+ + +++N + ISV+SAC
Sbjct: 193 ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE-GVKVNGVAMISVLSACT 251
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A ++G++ H + +++ V++ TL+++Y
Sbjct: 252 QLGALDQGRWAHSYIERNKIKITVRLATTLVDLY 285
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A +F M K+ +W+S ++G + G C+ +FS+MK D + N +TF+SV
Sbjct: 289 GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQD-GVTPNAVTFVSV 347
Query: 62 ISACALAKAREEGQ-YVHCCAVKLGMELQVKVVNTLINMY 100
+ C++ +EGQ + + G+E Q++ L+++Y
Sbjct: 348 LRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLY 387
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G AQ+LFDEMP +D V WN+L+ G+S+ G + +F VM + T +++
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ-GFSPSATTLVNL 157
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ C +G+ VH A K G+EL +V N LI+ Y
Sbjct: 158 LPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFY 196
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
A++LF EM +K VSWN+++ +S+ G ++VF M + ++E++ +T I+++S
Sbjct: 204 SAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM-FEKNVEISPVTIINLLS-- 260
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A + +HC VK GM + VV +L+ Y
Sbjct: 261 ----AHVSHEPLHCLVVKCGMVNDISVVTSLVCAY 291
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK----SDLDLELNELT 57
G DA+ LFDEMP ++ +SW+ L++G+ G + +F M+ ++ + NE T
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 58 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+V+SAC A E+G++VH K +E+ + + LI+MY
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 65.1 bits (157), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ DA+ +F M +KD VSWNS+++G + G + + M+ D+ T IS
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRH-DILPGSFTLISS 421
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S+CA K + GQ +H ++KLG++L V V N L+ +Y
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLY 460
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
F+ MP ++ SWNS++SG+++ G + +F MK D + +TF+ V+SAC+ A
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 70 AREEG 74
EEG
Sbjct: 736 LLEEG 740
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G + A+ +FDEMP ++ VSW +VSG+S+ G+ + M + + N+ F+SV
Sbjct: 50 GDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKE-GIFSNQYAFVSV 108
Query: 62 ISACALAKARE--EGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC + G+ +H KL + V N LI+MY
Sbjct: 109 LRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY 149
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK---SDLDLELNELTFISVIS 63
A +LFDEMP +D VSWN+++SG++ G L + +F+ MK SD+D +F ++
Sbjct: 54 ANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD----GYSFSRLLK 109
Query: 64 ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A K + G+ VH +K G E V V ++L++MY
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMY 146
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA LF+ + +KD +SWNS+++GF+++G + + FS ++S ++++++ F ++
Sbjct: 356 GTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS-EIKVDDYAFSAL 414
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ +C+ + GQ +H A K G V+++LI MY
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMY 453
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 2 GATPDAQLLFDEMP-NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
G+ DA+ +FD + +KD +SWNS+++GFSK + +F M+ +E + T+
Sbjct: 252 GSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW-VETDIYTYTG 310
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++SAC+ + + G+ +H +K G+E N LI+MY
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY 350
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC- 65
A+ LFDEM + VSW S++SG++ G N +S+F M D + NE TF SV AC
Sbjct: 83 ARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACS 142
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ALA++R G+ +H G+ + V ++L++MY
Sbjct: 143 ALAESR-IGKNIHARLEISGLRRNIVVSSSLVDMY 176
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ LF P K+ +SWN+L+SG+ K G ++F M+SD ++ NE T SV+ C
Sbjct: 77 DAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD-GIKPNEYTLGSVLRMC 135
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
G+ +H +K G +L V VVN L+ MY
Sbjct: 136 TSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMY 170
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 6 DAQLLFDEMPN-KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 64
+A+ LF+ M K+ V+W S+++G+S+ G + F ++ + + + N+ TF SV++A
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN-QSNQYTFPSVLTA 236
Query: 65 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
CA A G VHCC VK G + + V + LI+MY
Sbjct: 237 CASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMY 272
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ L + M D VSWNS++ G ++G +G +S+F M + D+++++ T S+++ A
Sbjct: 281 ARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH-ERDMKIDDFTIPSILNCFA 339
Query: 67 LAKAREE-GQYVHCCAVKLGMELQVKVVNTLINMY 100
L++ + HC VK G V N L++MY
Sbjct: 340 LSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY 374
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A +F+ M KD +SW +LV+G + G + +F M+ + +++ SV
Sbjct: 378 GIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG-GITPDKIVTASV 436
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SA A E GQ VH +K G + V N+L+ MY
Sbjct: 437 LSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMY 475
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ LFDEMP++D V+W ++++G++ F M NE T SV
Sbjct: 59 GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ-GTSPNEFTLSSV 117
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ +C K G VH VKLGME + V N ++NMY
Sbjct: 118 LKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMY 156
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ F EM +KD ++WN+L+S +R D + +F +S N TF S+
Sbjct: 262 GYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMFQRFESQ-GFVPNCYTFTSL 319
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ACA A GQ +H + G V++ N LI+MY
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMY 358
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DAQL+FD + +++ VSWN+L++G ++R + +F M D + ++ S+
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSYASL 268
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
AC+ E+G++VH +K G +L NTL++MY
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 307
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ +A+ +F++MP +DFV+W +L+SG+S+ + + F+ M NE T SV
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR-FGYSPNEFTLSSV 167
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I A A + G +H VK G + V V + L+++Y
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ DA+ +FD + +D VSWNSL++ +++ G + F M+ + + NE++F+SV
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR-VGIRPNEISFLSV 369
Query: 62 ISACALAKAREEGQYVHCCAVKLGM 86
++AC+ + +EG + + K G+
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKDGI 394
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFS---VMKSDLD--LELNEL 56
G DA+ +FDE+P ++ VSW S++ G+ G+ + +S+F V ++D D + L+ +
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM 184
Query: 57 TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SVISAC+ A+ + +H +K G + V V NTL++ Y
Sbjct: 185 GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FD++ +KD VS+NS++S +++ G VF + + + N +T +V
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 293
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A + + A G+ +H +++G+E V V ++I+MY
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMY 332
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ FD M NK+ SW ++++G+ G + +F M D + N +TF+SV
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM-IDSGVRPNYITFVSV 394
Query: 62 ISACALAKAREEG-QYVHCCAVKLGME 87
++AC+ A EG ++ + + G+E
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVE 421
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ + DEMP K+ VSW +++S +S+ G ++VF+ M D + NE TF +V+++C
Sbjct: 105 DARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS-DGKPNEFTFATVLTSC 163
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A G+ +H VK + + V ++L++MY
Sbjct: 164 IRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMY 198
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ LFD MP + +SWN+++ G+SK G + +F +M+ + ++ + +T ++V+S C+
Sbjct: 308 ARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Query: 67 LAKAREEG 74
+ + G
Sbjct: 368 HGRMEDTG 375
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ +F+ +P +D VS ++++G+++ G + +F + S+ + N +T+ S+
Sbjct: 202 GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE-GMSPNYVTYASL 260
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++A + + G+ HC ++ + + N+LI+MY
Sbjct: 261 LTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMY 299
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ LFD M +D VSWN ++ G+++ G + + +F + ++ + +E+T ++
Sbjct: 206 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 265
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SAC+ A E G+++H + L VKV LI+MY
Sbjct: 266 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMY 304
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ +A L+F++ P KD V+WN++++G++ G + + +F+ M+ L+ ++TFI
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 62 ISACALAKAREEG 74
+ ACA A EG
Sbjct: 368 LQACAHAGLVNEG 380
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
MG A +FD+M +D +SWNS+ + +++ G + +FS+M+ D E+N T +
Sbjct: 208 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD-EVNSTTVST 266
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++S ++ G+ +H VK+G + V V NTL+ MY
Sbjct: 267 LLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 306
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G +++ + +MP +D V+WN+L+ G+++ D ++ F M+ + + N +T +S
Sbjct: 410 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVS 468
Query: 61 VISACAL-AKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+SAC L E G+ +H V G E V N+LI MY
Sbjct: 469 VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 509
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
++ +F+EMP+++ VSW SL+ G+S +G+ + ++ M+ + + NE + VIS+C
Sbjct: 113 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCG 171
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINM 99
L K G+ + VK G+E ++ V N+LI+M
Sbjct: 172 LLKDESLGRQIIGQVVKSGLESKLAVENSLISM 204
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD----LGNCMSVFSVMKSDLDLELNELT 57
G + +A L+F +MP KD +SWNSL++ F G LG S+ S KS +N +T
Sbjct: 310 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS-----VNYVT 364
Query: 58 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
F S ++AC E+G+ +H V G+ + N L++MY
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMY 407
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +Q LF+ + N++ ++WN++++ + G + + S M+S + L++ +F
Sbjct: 513 GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS-FGVSLDQFSFSEG 571
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SA A EEGQ +H AVKLG E + N +MY
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMY 610
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ LFD MP ++ VSWN+++SG + G M F M DL ++ + S+
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASL 64
Query: 62 ISACALAKAR-EEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++AC + + EG VH K G+ V V ++++Y
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY 104
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
MG A +FD+M +D +SWNS+ + +++ G + +FS+M+ D E+N T +
Sbjct: 191 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD-EVNSTTVST 249
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++S ++ G+ +H VK+G + V V NTL+ MY
Sbjct: 250 LLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 289
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G +++ + +MP +D V+WN+L+ G+++ D ++ F M+ + + N +T +S
Sbjct: 393 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVS 451
Query: 61 VISACAL-AKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+SAC L E G+ +H V G E V N+LI MY
Sbjct: 452 VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 492
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
++ +F+EMP+++ VSW SL+ G+S +G+ + ++ M+ + + NE + VIS+C
Sbjct: 96 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCG 154
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINM 99
L K G+ + VK G+E ++ V N+LI+M
Sbjct: 155 LLKDESLGRQIIGQVVKSGLESKLAVENSLISM 187
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD----LGNCMSVFSVMKSDLDLELNELT 57
G + +A L+F +MP KD +SWNSL++ F G LG S+ S KS +N +T
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS-----VNYVT 347
Query: 58 FISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
F S ++AC E+G+ +H V G+ + N L++MY
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMY 390
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +Q LF+ + N++ ++WN++++ + G + + S M+S + L++ +F
Sbjct: 496 GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS-FGVSLDQFSFSEG 554
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SA A EEGQ +H AVKLG E + N +MY
Sbjct: 555 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMY 593
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ +F+ + NK +SWNS+ +GFS+ G + F M LDL +E++ SV
Sbjct: 398 GRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHK-LDLPTDEVSLSSV 456
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ISACA + E G+ V A +G++ V ++LI++Y
Sbjct: 457 ISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY 495
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK----------------------- 46
FD MP +D SWN +VSGF+K G+L +F+ M
Sbjct: 115 FFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEA 174
Query: 47 ----SDLDLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+L+ + +T +V+ ACA +A + G+ +H + G+E K+ ++L+N+Y
Sbjct: 175 LRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVY 232
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +++ LFD N+ + WNS++SG+ + +F+ M+++ + T +V
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET--REDSRTLAAV 324
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I+AC E G+ +HC A K G+ + V +TL++MY
Sbjct: 325 INACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 63.5 bits (153), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DAQ +FDEM +++ VSWNSL++ F + G + VF +M +E +E+T SV
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLES-RVEPDEVTLASV 259
Query: 62 ISACALAKAREEGQYVHCCAVKLG-MELQVKVVNTLINMY 100
ISACA A + GQ VH VK + + + N ++MY
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G +A LF MP +D +WNS+VSGF++ + F++M + LNE +F S
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKE-GFVLNEYSFAS 157
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+SAC+ +G VH K V + + L++MY
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
+T A+L+F +M ++ VSWN+L++G+++ G+ +S+F ++K + + +F ++
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE-SVCPTHYSFANI 392
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQ------VKVVNTLINMY 100
+ ACA G H +K G + Q + V N+LI+MY
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G + L+F +M +D VSWN+++ GF++ G + +F M + + + +T I V
Sbjct: 441 GCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHITMIGV 499
Query: 62 ISACALAKAREEGQY 76
+SAC A EEG++
Sbjct: 500 LSACGHAGFVEEGRH 514
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A LFD MP K+ SW +++SGFS+ G+ + +F M+ D ++ N +T +SV
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ACA E G+ + A + G + V N I MY
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMY 260
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRG-DLGNCMSVFSVMKSDLDLELNELTFI 59
+G AQ +FD+MP +D VSWNSL+ G+SK+G D +F M ++ + +T +
Sbjct: 313 LGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 60 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
S+IS A G++VH ++L ++ + + LI+MY
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMY 413
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ +A+L+F EM KD +SWN+++ G+SK +S+F+++ + +E T V
Sbjct: 446 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ACA A ++G+ +H ++ G V N+L++MY
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMY 544
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FDEM +D +SWNS+++G+ G +SVF M +E++ T +SV + CA
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCA 307
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ G+ VH VK + + NTL++MY
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
GA A +LFD++ +KD VSW +++G+ G +++F+ M+ +E +E++F+S+
Sbjct: 548 GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ-AGIEADEISFVSL 606
Query: 62 ISACALAKAREEGQYV-----HCCAVKLGMELQVKVVNTL 96
+ AC+ + +EG H C ++ +E +V+ L
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +F EM ++ VS+ S+++G+++ G G + +F M+ + + + T +V
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE-GISPDVYTVTAV 403
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ CA + +EG+ VH + + + V N L++MY
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ A +F+++ ++ V+WNS++ GFS+ G+ +S+F M LE+NE+TF++V
Sbjct: 453 GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNEVTFLAV 511
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I AC+ + E+G++VH + G++ + LI+MY
Sbjct: 512 IQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMY 549
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ +FD MP +D V+W++LVS + G++ + +F M D +E + +T ISV
Sbjct: 150 GNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDD-GVEPDAVTMISV 208
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ CA + VH + +L + N+L+ MY
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMY 247
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
+FDEMP +D SWN+++S F + G+ + +F M+S E N ++ ISAC+
Sbjct: 164 VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESS-GFEPNSVSLTVAISACSRLL 222
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
E G+ +H VK G EL V + L++MY
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMY 253
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +F +MP K V+WNS++ G+ +GD +C+ + + M + ++ T S++ AC+
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE-GTRPSQTTLTSILMACS 320
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ G+++H ++ + + V +LI++Y
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLY 354
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSV--FSVMKSDLDLELNELTFISVISA 64
A +F++MP ++ SWN+++ GFS+ + +++ F M SD +E N TF SV+ A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 65 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
CA +EG+ +H A+K G V++ L+ MY
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMY 173
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A++LFD+M + VSWN+++SG+S G + + VF MK D+ N +T +S
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG-DIRPNYVTLVS 279
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+ A + + E G+++H A G+ + + + LI+MY
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 319
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 2 GATPDAQLLFDEMP--NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFI 59
G AQ LFDE+P KD V W +L+S FS+ G L N M +F M+ +E+++++ +
Sbjct: 57 GEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRK-RVEIDDVSVV 115
Query: 60 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ CA + Q H AVK+G+ VKV N L++MY
Sbjct: 116 CLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMY 156
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 62.4 bits (150), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FDEM +D VSWNS++SG+S+ G +C ++ M + D + N +T ISV AC
Sbjct: 186 ARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACG 245
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G VH ++ +++ + + N +I Y
Sbjct: 246 QSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFY 279
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G DA +F+EMP D V W+ +++ F + G + +F M+ + NE T S
Sbjct: 295 LGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP-NEFTLSS 353
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+++ CA+ K G+ +H VK+G +L + V N LI++Y
Sbjct: 354 ILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY 393
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
LF E+ +K+ VSWN+++ G+ G+ G S+F + + + E+TF S + ACA
Sbjct: 405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN-QVSVTEVTFSSALGACASLA 463
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ + G VH A+K +V V N+LI+MY
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMY 494
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
AQ +F+EM D SWN+L+SG+S G + + +MK D D + N LTF+ V+S C+
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK-DRDCKPNGLTFLGVLSGCS 561
Query: 67 LAKAREEGQ 75
A ++GQ
Sbjct: 562 NAGLIDQGQ 570
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ LFD+M +D VSWN+++SG++ G++ + + M+ D L ++ TF + +S
Sbjct: 197 DAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD-GLRPDQQTFGASLSVS 255
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
E G+ +HC VK G ++ + + LI MY
Sbjct: 256 GTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMY 290
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G + ++F+ M +D VSWN+++SG+++ DL + +F MK +++ T +S+
Sbjct: 395 GHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSL 454
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC+ A A G+ +HC ++ + V L++MY
Sbjct: 455 LQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMY 493
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM---KSDLDLELNELTF 58
G + + + +PNKD V W ++SG + G + VFS M SDL E
Sbjct: 294 GKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSE----AI 349
Query: 59 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
SV+++CA + + G VH ++ G L +N+LI MY
Sbjct: 350 ASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMY 391
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FDEM ++ VSW S++ G+++R + + +F M D ++ N +T + V
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ISACA + E G+ V+ G+E+ +V+ L++MY
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A F+ MP K+ VSWN+++SG + + VF M+S + + +T +S+
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
SAC A + ++++ K G++L V++ TL++M+
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 6 DAQLLFDEMPNKD-FVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 64
DAQ +FDE+P++D V WN+LV+G+S+ + + VFS M+ + + ++ T SV+SA
Sbjct: 213 DAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE-GVGVSRHTITSVLSA 271
Query: 65 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ + G+ +H AVK G + V N LI+MY
Sbjct: 272 FTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMY 307
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 55/94 (58%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ LFD MP ++ VSWN+++ G+ + + +F M++ L+ +++T +SV+ A +
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A G++ HC + ++ +VKV +++MY
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMY 319
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FDEMP K SWN+++ G++ G+ + +F M ++ + +E+T ++V
Sbjct: 323 GEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM--IEEKPDEITMLAV 380
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINM 99
I+AC EEG+ ++G+ +++ ++++
Sbjct: 381 ITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDL 418
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FDEM ++ VSW S++ G+++R + + +F M D ++ N +T + V
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ISACA + E G+ V+ G+E+ +V+ L++MY
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A F+ MP K+ VSWN+++SG + + VF M+S + + +T +S+
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
SAC A + ++++ K G++L V++ TL++M+
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A +FDE+ D V+W+S+VSGF K G + F M D+ + +T I++
Sbjct: 110 GRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITL 169
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SAC G+ VH ++ G + +VN+L+N Y
Sbjct: 170 VSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCY 208
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 3 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 62
A +A LF + KD +SW+++++ + + G + VF+ M D E N T + V+
Sbjct: 213 AFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD-GTEPNVATVLCVL 271
Query: 63 SACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ACA A E+G+ H A++ G+E +VKV L++MY
Sbjct: 272 QACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ +A +F+ + KD V W SL++G+ G + F+ M +++ NE+TF+S+
Sbjct: 415 GSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSI 474
Query: 62 ISACALAKAREEG 74
+SAC+ A EG
Sbjct: 475 LSACSHAGLIHEG 487
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
+A +F +P KD VSW +L+SGF+ G + FS+M + + + + + V+ +C
Sbjct: 317 EAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSC 376
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ E+ + H +K G + + +L+ +Y
Sbjct: 377 SELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELY 411
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FD MP ++ VSW +L++G+ + G+ +FS M S NE T SV+++C
Sbjct: 115 ARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS--HCFPNEFTLSSVLTSCR 172
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
E G+ VH A+KLG+ + V N +I+MY
Sbjct: 173 Y----EPGKQVHGLALKLGLHCSIYVANAVISMY 202
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
+FD+M ++D VSWNS++ +S G + + + VF M D+ + TFI+++SAC+ A
Sbjct: 426 VFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM----DINPDSATFIALLSACSHAG 481
Query: 70 AREEG 74
EEG
Sbjct: 482 RVEEG 486
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G + +FD+MP ++ SWN L+ G+++ G + + F M + + N+ T
Sbjct: 134 IGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTL 193
Query: 61 VISACALAKAREEGQYVHCCAVKLGM-ELQVKVVNTLINMY 100
V+SACA A + G++VH LG ++ V V N LI+MY
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMY 234
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ A+ LFD M ++ VSWNS++ + + + M +F M D ++ +++ +
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEGVKPTDVSVMGA 343
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ACA E G+++H +V+LG++ V VVN+LI+MY
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
+A+ +FD MP +D VSWN++V+G+S+ G + + M + +L+ + +T +SV+ A
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE-NLKPSFITIVSVLPAV 246
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ + G+ +H A++ G + V + L++MY
Sbjct: 247 SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A +F ++ ++ VSWN+++ GF++ G + ++ FS M+S ++ + T++SVI+A A
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR-TVKPDTFTYVSVITAIA 449
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+++H ++ ++ V V L++MY
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMY 483
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
GA A+L+FD M + +WN+++ G+ G + +F M+ ++ N +TF+SV
Sbjct: 487 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG-TIKPNGVTFLSV 545
Query: 62 ISACALAKAREEG 74
ISAC+ + E G
Sbjct: 546 ISACSHSGLVEAG 558
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLG-NCMSVFSVMKSDLDLELNELTFIS 60
G+ A+ +FDEM KD +SWNSL+SG S+ G G + +F M + +EL+ ++F S
Sbjct: 223 GSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE-GVELDHVSFTS 281
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
VI+ C + + +H +K G E ++V N L++ Y
Sbjct: 282 VITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 3 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 62
A DA+ F+++ ++ +SWN+++SGF++ G + +F + + + NE TF SV+
Sbjct: 422 ALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGSVL 479
Query: 63 SACALAK--AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+A A A+ + ++GQ H +KLG+ V + L++MY
Sbjct: 480 NAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMY 519
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ +FDEM D VSWNS++ ++K G + +FS M ++ + +T ++V+ C
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A G+ +HC AV M + V N L++MY
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 20/115 (17%)
Query: 1 MGATPDAQLLFDEMPNK----DFVSWNSLVSGFSKRG----DLGNCMSVFSVMKSDLDLE 52
+G DA LF++M + D V+W++ +SG+++RG LG C + S ++
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-----GIK 362
Query: 53 LNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVK-------VVNTLINMY 100
NE+T ISV+S CA A G+ +HC A+K ++L+ V+N LI+MY
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ LF+ MP K+ VSW +L++GFS+ GD +S + M + L+ NE T +V
Sbjct: 241 GELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM-LEKGLKPNEYTIAAV 299
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SAC+ + A G +H + G++L + L++MY
Sbjct: 300 LSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMY 338
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G DA+ +F+EMP +D VSWNS++SG+ GD + + +F M + + + +S
Sbjct: 178 LGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK-CGFKPDRFSTMS 236
Query: 61 VISACALAKAREEGQYVHCCAVKLGMEL-QVKVVNTLINMY 100
+ AC+ + + G+ +HC AV+ +E V V+ ++++MY
Sbjct: 237 ALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA LFDEM D WN ++ GF+ G + +S M ++ + T+ VI +
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF-AGVKADTFTYPFVIKSV 140
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A + EEG+ +H +KLG V V N+LI++Y
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+++FD M K+ +SWNS+++ + + G + + +F + D L + T S+
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDSTTIASI 437
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A A + + EG+ +H VK ++N+L++MY
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ LFD+MP +D VSW ++++G+S+ G + +F M+ + LN +F S
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE-GGRLNRSSFSSA 415
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S CA A E G+ +H VK G E V N L+ MY
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ +A LF EM KD VSWN++++G+S+ G + F MK + L+ ++ T ++V
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE-GLKPDDATMVAV 516
Query: 62 ISACALAKAREEG-QYVHCCAVKLGM 86
+SAC+ ++G QY + G+
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGV 542
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS--- 63
A+ LF+ MP +D SWN+++SG+++ G + + SVF M D+ N L V +
Sbjct: 145 ARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKM 204
Query: 64 --ACALAKARE 72
AC L K+RE
Sbjct: 205 EEACMLFKSRE 215
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+ LF++MP KD +SW +++ G+S+ ++VF M + + +E+T +
Sbjct: 979 LGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE-GIIPDEVTMST 1037
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
VISACA E G+ VH ++ G L V + + L++MY
Sbjct: 1038 VISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMY 1077
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ A L+F +P K+ WNS++ G + G + +F+ M+ + ++ N +TF+SV
Sbjct: 1081 GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEME-SVKPNAVTFVSV 1139
Query: 62 ISACALAKAREEGQYVH 78
+AC A +EG+ ++
Sbjct: 1140 FTACTHAGLVDEGRRIY 1156
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 30/125 (24%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL---------------- 49
DA +FDEM +D +SWNSL+SG+++ G + +F +M
Sbjct: 162 DAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGC 221
Query: 50 --------------DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNT 95
+E +E++ ISV+ +CA + E G+++H A + G Q V N
Sbjct: 222 YVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNA 281
Query: 96 LINMY 100
LI MY
Sbjct: 282 LIEMY 286
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A LF +M KD +SW++++SG++ G+ + F+ M+ ++ N +TF+ +
Sbjct: 290 GVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR-AKVKPNGITFLGL 348
Query: 62 ISACALAKAREEG 74
+SAC+ +EG
Sbjct: 349 LSACSHVGMWQEG 361
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
LFD MP K+ +SW ++++G+ + + ++VFS M D ++ N T++S++SAC+
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
EGQ +H K + V + L+NMY
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMY 376
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ LFDE P K SWN+++SG+++ G + +S+F M+ + N +T ++SACA
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS-EFSPNPVTITCILSACA 431
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A G++VH E + V LI MY
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 47/95 (49%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ +FD MP KD + WN+++SG+ K + VF + ++ L+ T + ++ A
Sbjct: 172 DARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAV 231
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A + G +H A K G V+ I++Y
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLY 266
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ +A+ LFD M K+ V+WN+++SG+ G +++F M + + +TF+ V
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS-GITPTPVTFLCV 527
Query: 62 ISACALAKAREEGQYVHCCAV-KLGMELQVKVVNTLINM 99
+ AC+ A +EG + + + G E VK ++++
Sbjct: 528 LYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDI 566
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A +F+ MP +D +WN+++SGF + G S+F M+ + ++ + +T +++I + +
Sbjct: 106 AAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLN-EITPDSVTVMTLIQSAS 164
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
K+ + + +H ++LG+++QV V NT I+ Y
Sbjct: 165 FEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ +A+ +FD P K V+W ++++G++ G + +FS M DLD + N +TF++V
Sbjct: 407 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM-IDLDYKPNHITFLAV 465
Query: 62 ISACALAKAREEG-QYVH 78
+ ACA + + E+G +Y H
Sbjct: 466 LQACAHSGSLEKGWEYFH 483
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 4 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM-KSDLDLELNELTFISVI 62
T A+LLFD M ++ VSW ++SG++++GD+ +++F M KS +L +T +S+I
Sbjct: 307 TCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDL--VTLLSLI 364
Query: 63 SACALAKAREEGQYVHCCAVKLGMEL-QVKVVNTLINMY 100
S C + E G+++ A G + V + N LI+MY
Sbjct: 365 SGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMY 403
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 2 GATPDAQLLFDEMPNKD--FVSWNSLVSGFSKRGDLGNCMSVFSVM-KSDLDLELNELTF 58
G A+L+F+ + D VSWNS+ +S G+ + ++ +M + + +L+ TF
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS--TF 259
Query: 59 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I++ ++C + +G+ +H A+ LG + ++ +NT I+MY
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMY 301
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ +F+E + D V W +++ G++ G + +S+F MK ++++ N +T SV
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKG-VEIKPNCVTIASV 349
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S C L + E G+ VH ++K+G+ V N L++MY
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMY 387
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ +F+ KD V+WNS++SGFS+ G + + +F M S+ + N +T S+ SAC
Sbjct: 395 DAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE-SVTPNGVTVASLFSAC 453
Query: 66 ALAKAREEGQYVHCCAVKLGM--ELQVKVVNTLINMY 100
A + G +H +VKLG V V L++ Y
Sbjct: 454 ASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFY 490
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A +F+++ ++ V W S+++G+ K + +F+ M+ + ++ NE T+ ++
Sbjct: 190 GEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN-NVLGNEYTYGTL 248
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I AC A +G++ H C VK G+EL +V +L++MY
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMY 287
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+L+FD + K+ ++W++++ G+ K+GD + +F M + NE TF S+
Sbjct: 494 GDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK-QQKPNESTFTSI 552
Query: 62 ISACALAKAREEGQ 75
+SAC EG+
Sbjct: 553 LSACGHTGMVNEGK 566
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FD M N+D +SWN+++SG+ + G + + + +F M ++ ++L+ T +S+
Sbjct: 166 GKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE-SVDLDHATIVSM 224
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ C K E G+ VH + + +++V N L+NMY
Sbjct: 225 LPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ +FD M +D ++W +++G+++ GD+ N + + +M+ + + N +T S+
Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE-GVRPNAVTIASL 325
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S C A +G+ +H AV+ + + + +LI+MY
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ +FDE P +D VSWN L++G+ K G+ + V+ +M+S+ ++ +++T I +
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESE-GVKPDDVTMIGL 263
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S+C++ G+ + + G+ + + +VN L++M+
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF 302
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGF--SKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 64
++ LFD+M KD V WN+++ G +KRG + +++F M++ + + +E+T I +SA
Sbjct: 342 SRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ--DALALFQEMQTS-NTKPDEITMIHCLSA 398
Query: 65 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
C+ A + G ++H K + L V + +L++MY
Sbjct: 399 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMY 434
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A LFD +D VSWNSL+SG+ + G +++ + M D L L SV
Sbjct: 197 GKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRD-GLNLTTYALGSV 255
Query: 62 ISACALAKAR---EEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC + E+G +HC KLGME + V L++MY
Sbjct: 256 LKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMY 297
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ LFD MP ++ +S+NSL+SG+++ G M +F + + +L+L++ T+ + C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELF-LEAREANLKLDKFTYAGALGFCG 159
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G+ +H V G+ QV ++N LI+MY
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMY 193
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN-----CMSVFSVMKSDLDLELNEL 56
G+ +A LF MP+K+ V++N+++SGF + ++ + +F M+ LE +
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR-GLEPSPS 359
Query: 57 TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
TF V+ AC+ AK E G+ +H K + + + LI +Y
Sbjct: 360 TFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY 403
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A +F +PN VSW ++SG++K D + + +F M+ +E+N T SV
Sbjct: 299 GHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHS-GVEINNCTVTSV 357
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ISAC E VH K G L V LI+MY
Sbjct: 358 ISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMY 396
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ DA LFD +P D VS N ++SG+ + + FS M L E NE+++ SV
Sbjct: 98 GSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF-LGFEANEISYGSV 156
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ISAC+ +A + V C +K+G V + LI+++
Sbjct: 157 ISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ ++ LF +P KD W S++SGF++ G L + +FS M D +E T +V
Sbjct: 499 GSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD-GTSPDESTLAAV 557
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ C+ + G+ +H ++ G++ + + + L+NMY
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ A+ ++D +P D VS +SL+SG+S+ G + + +F M ++ S+
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS-GFTMDSFAISSI 658
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A AL+ G VH K+G+ + V ++L+ MY
Sbjct: 659 LKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMY 697
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G D+ +F+ + KD VSWN+L+SGF + G + VF+ M + +E++E T SV
Sbjct: 133 GHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE-RVEISEFTLSSV 191
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQV 90
+ CA K ++G+ VH V G +L V
Sbjct: 192 VKTCASLKILQQGKQVHAMVVVTGRDLVV 220
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL-NELTFIS 60
G A+ +F +P+K VSW S++ ++ GD + +F M + L N +TF+
Sbjct: 330 GQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLV 389
Query: 61 VISACALAKAREEGQ 75
VISACA A +EG+
Sbjct: 390 VISACAHAGLVKEGK 404
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDLDLELNELTFISVISAC 65
A LFDE+P +D S NS +S + G+ + +++F + ++ DL + TF V+ AC
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSH--TFTPVLGAC 94
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+L E G+ VH +K G E LI+MY
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMY 129
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G D+ +F M D V+WN+++S + GD + V + M+ ++ + TF+
Sbjct: 457 GEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS-EVVPDMATFLVT 515
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ CA A+ G+ +HCC ++ G E ++++ N LI MY
Sbjct: 516 LPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +F+ M KD VSWNS++SG+ + GDL M +F +M ++ + + +T++ +IS
Sbjct: 361 ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI-MEEQADHITYLMLISVST 419
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G+ +H +K G+ + + V N LI+MY
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
MG A+ +FDEMP +D VSWNSL+SG+S G + ++ +K+ + + T S
Sbjct: 154 MGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP-DSFTVSS 212
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+ A ++GQ +H A+K G+ V V N L+ MY
Sbjct: 213 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 15 PNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEG 74
P K+ WNS++ FSK G + + ++ + ++ TF SVI ACA E G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRES-KVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 75 QYVHCCAVKLGMELQVKVVNTLINMY 100
V+ + +G E + V N L++MY
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMY 151
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G D +++ MP ++ V+WN+L+ G ++ G + ++ +MK N++TF++V
Sbjct: 140 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS-GCRPNKITFVTV 198
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S+C+ R +GQ +H A+K+G V VV++LI+MY
Sbjct: 199 LSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMY 237
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA F E ++D V W+S++S + G + +F+ M ++E+NE+ F+++
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 62 ISACALAKAREEG 74
+ AC+ + +++G
Sbjct: 301 LYACSHSGLKDKG 313
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 30/130 (23%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD------------ 48
+G P A ++ M K+++S N L++G+ + GDL N VF M
Sbjct: 7 LGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGL 66
Query: 49 LDLELN------------------ELTFISVISACALAKAREEGQYVHCCAVKLGMELQV 90
+ E N E T SV S A ++ GQ +H +K G+EL +
Sbjct: 67 IQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDL 126
Query: 91 KVVNTLINMY 100
V ++L +MY
Sbjct: 127 VVNSSLAHMY 136
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A LF +P K+ SW +L+SGF + G SVF+ M+ + L+ L S+
Sbjct: 185 GRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSI 244
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ACA A G+ VH + LG + V + N LI+MY
Sbjct: 245 VGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY 283
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
GA A +FDEMP++D ++W S+++ ++ G +SVFS + S L ++ F ++
Sbjct: 52 GAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSAL 111
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ACA + + G+ VHC + V ++L++MY
Sbjct: 112 VKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMY 150
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G DA+LLF EM + D V+WN ++SG KRG + F M+ ++ T S
Sbjct: 274 LGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS-SVKSTRSTLGS 332
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+SA + + G VH A+KLG+ + V ++L++MY
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A +F+ + K+ V WN+++ G++ G+ M +F MKS +++ TF S++S CA
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS-GYNIDDFTFTSLLSTCA 439
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ E G H +K + + V N L++MY
Sbjct: 440 ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
GA DA+ +F+ M ++D V+WN+++ + + + +F M + + S
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL-CGIVSDGACLAST 535
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC +G+ VHC +VK G++ + ++LI+MY
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMY 574
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ FD + KD +WNS++S +S G G + F + + + N+ TF V+S CA
Sbjct: 114 AEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFEN-QIFPNKFTFSIVLSTCA 171
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
E G+ +HC +K+G+E L++MY
Sbjct: 172 RETNVEFGRQIHCSMIKMGLERNSYCGGALVDMY 205
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 2 GATPDAQLLFDEMPNK-DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
G + +FDEM + + VSWNSL++G++K G + + +F M+ + +E+TF+
Sbjct: 781 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS-HIMPDEITFLG 839
Query: 61 VISACALAKAREEGQYVHCCAV-KLGMELQVKVVNTLINM 99
V++AC+ A +G+ + + + G+E +V V ++++
Sbjct: 840 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDL 879
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 6 DAQLLFDEMPN-KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 64
+A LF E+ + K V W ++SG S+ G + + M+ D L ++ TF++V+
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP-DQATFVTVLRV 741
Query: 65 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
C++ + EG+ +H L +L NTLI+MY
Sbjct: 742 CSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 777
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL-----NELTFIS 60
D++L+FDEM KD V WNS+ +G+ ++ + +++F L+L+L +E TF +
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF------LELQLSRERPDEFTFAN 560
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+++A + + GQ HC +K G+E + N L++MY
Sbjct: 561 MVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMY 600
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A LF+ MPNK+ +SW +L+SG+ + M +F+ M S L+ + S+
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSI 356
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+++CA A G VH +K + V N+LI+MY
Sbjct: 357 LTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMY 395
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+L+FD +P K V+W +++SG K G + +F + D ++ + +V+SAC+
Sbjct: 202 ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED-NVVPDGYILSTVLSACS 260
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ E G+ +H ++ G+E+ ++N LI+ Y
Sbjct: 261 ILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSY 294
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ DA FD ++D V WNS++S ++ G+ + + M S+ +E N +TF+ V
Sbjct: 604 GSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE-GIEPNYITFVGV 662
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVK 91
+SAC+ A E+G ++ G+E + +
Sbjct: 663 LSACSHAGLVEDGLKQFELMLRFGIEPETE 692
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFS-VMKSDLDLELNELTFIS 60
G A +F MP ++ VSW+++++ ++K G + F +M+ D N +T +S
Sbjct: 231 GCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+ ACA A E+G+ +H ++ G++ + V++ L+ MY
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 330
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
Q +FD M ++D VSWNSL+S + G + +F M ++ +TF+SV+ AC+
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN-GASPTPVTFVSVLGACS 397
Query: 67 LAKAREEGQ 75
EEG+
Sbjct: 398 HEGLVEEGK 406
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G ++ L F++ D ++WN+LVSGF + G+ + VF M + ++ N TF S
Sbjct: 640 GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE-GIDNNNFTFGSA 698
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A + ++G+ VH K G + + +V N LI+MY
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 737
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+ +F M +D V++N+L++G S+ G M +F M D LE + T S
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLAS 394
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ AC+ GQ +H KLG K+ L+N+Y
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FD + KD SW +++SG SK + +F M L + F SV+SAC
Sbjct: 241 ARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACK 299
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ E G+ +H +KLG V N L+++Y
Sbjct: 300 KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A + KD VSW ++++G+++ ++ F M D + +E+ +
Sbjct: 538 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML-DRGIRSDEVGLTN 596
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SACA +A +EGQ +H A G + N L+ +Y
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
+FDEMP + +WN ++ + R +G +F M S+ ++ NE TF V+ AC
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSE-NVTPNEGTFSGVLEACRGGS 200
Query: 70 -AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A + + +H + G+ V N LI++Y
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLY 232
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA +FDE+P+++ V+WN+L+ G+ + G + +FS M+ +E +T +
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ-GVEPTRVTVSTC 280
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SA A EEG+ H A+ GMEL + +L+N Y
Sbjct: 281 LSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFY 319
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+++FD M KD V+WN ++SG+ ++G + + + + +M+ + L+ + +T +
Sbjct: 322 VGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE-KLKYDCVTLAT 380
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++SA A + + G+ V C ++ E + + +T+++MY
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMY 420
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FD +P+KD+VSWNS+++G+ G L + +F +M + +E +++ SV
Sbjct: 244 GDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQN-GIEPDKVAISSV 302
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ K G+ +H ++ GME ++ V N LI +Y
Sbjct: 303 LARVLSFK---HGRQLHGWVIRRGMEWELSVANALIVLY 338
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 7 AQLLFDEMPNKDF--VSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 64
A +FD M +D +WNSL+SG+++ G + M+++ M D ++ + TF V+ A
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAED-GVKPDRFTFPRVLKA 204
Query: 65 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
C + + G+ +H VK G V V+N L+ MY
Sbjct: 205 CGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMY 240
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A LF++MP +D SWN++++ ++ G +S+F M ++ + NE+T + V
Sbjct: 207 GDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCV 266
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SACA + + +H A + + V V N+L+++Y
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLY 305
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G ++L+FD P+KD + WNS++SG++ G + VF M + NE+TF++
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 62 ISACALAKAREEGQYVH 78
+SAC+ A EEG ++
Sbjct: 440 LSACSYAGMVEEGLKIY 456
Score = 51.6 bits (122), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ LFDEMP+++ +SWN LVSG+ K G++ VF +M +V+S
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER-----------NVVSWT 114
Query: 66 ALAKAREEGQYVH 78
AL K YVH
Sbjct: 115 ALVKG-----YVH 122
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 30/129 (23%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD----------- 50
G DA+ LF+ MP K ++ N+++SG ++G++ VF MK D
Sbjct: 248 GRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHE 307
Query: 51 ---LELNEL----------------TFISVISACALAKAREEGQYVHCCAVKLGMELQVK 91
EL L T IS++S CA + G+ VH V+ ++ V
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVY 367
Query: 92 VVNTLINMY 100
V + L+ MY
Sbjct: 368 VASVLMTMY 376
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA LFD MP + VS+ +L+ G+++ M +F M+ +L + LNE+T +VISAC
Sbjct: 125 DALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR-NLGIMLNEVTLATVISAC 183
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ + + + A+KL +E +V V L++MY
Sbjct: 184 SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FD+ +KD SWN+++SG+++ + +F M S ++ + +T +SV
Sbjct: 385 GMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSV 444
Query: 62 ISACALAKAREEGQYVH 78
SA + + EEG+ H
Sbjct: 445 FSAISSLGSLEEGKRAH 461
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ +F+ KD V +N++V GFS+ G+ + N TF SV
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I AC++ + E GQ VH +K G+ +K+ ++L++MY
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ +FD+M K+ SW S++ G+ K G+ + +F+ MK + +E N +TF+
Sbjct: 322 GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMK-EFRIEPNYVTFLGA 380
Query: 62 ISACALAKAREEG 74
+SAC+ + ++G
Sbjct: 381 LSACSHSGLVDKG 393
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DAQ++FD+ KD V W +++S + + + VF M ++ + ++ SV
Sbjct: 292 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS-GIKPDVVSMFSV 350
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ISACA ++ ++VH C G+E ++ + N LINMY
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+ AT D +F++MP ++ VSW+S+++ S G+ + +S+F+ MK + ++E NE+TF+
Sbjct: 395 LDATRD---VFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE-NVEPNEVTFVG 450
Query: 61 VISACALAKAREEGQYV 77
V+ C+ + EEG+ +
Sbjct: 451 VLYGCSHSGLVEEGKKI 467
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ D L+F PNKD VSWN+++SG S G + +F M ++ +E +++TF+++
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAE-GMEPDDVTFVNI 530
Query: 62 ISACALAKAREEGQ-YVHCCAVKLGMELQV 90
ISAC+ E G Y + + ++G++ +V
Sbjct: 531 ISACSHKGFVERGWFYFNMMSDQIGLDPKV 560
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
+FD +++ ++W+++V+G+S+ G+ + +FS M S ++ +E T + V++AC+
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS-AGIKPSEYTIVGVLNACSDIC 336
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
EEG+ +H +KLG E + L++MY
Sbjct: 337 YLEEGKQLHSFLLKLGFERHLFATTALVDMY 367
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSV-MKSDLDLELNELTFIS 60
G D +F MP ++ +W+++VSG++ RG + + VF++ ++ + ++ F +
Sbjct: 167 GLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTA 226
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+S+ A G+ +HC +K G+ V + N L+ MY
Sbjct: 227 VLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMY 266
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ FD + +D W SL+SG+ + D + ++ MK+ + N+ T SV
Sbjct: 371 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT-AGIIPNDPTMASV 429
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC+ E G+ VH +K G L+V + + L MY
Sbjct: 430 LKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMY 468
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN---CMSVFSVMKSDLDLELNELTF 58
G A +F+ + KD VSWNSL++G+S+ G + + M +F M++ D+ N T
Sbjct: 63 GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ-DILPNAYTL 121
Query: 59 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A + ++ G+ H VK+ + V +L+ MY
Sbjct: 122 AGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMY 163
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +F++MP K +WN ++S RG L CM F + + L E +F+ V+ +
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVR-MGASLTESSFLGVLKGVS 226
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
K + + +HC A K G++ ++ VVN+LI+ Y
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAY 260
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G D++L FD + +K+ V WN+L+SG++ + D C+S+F M + E TF +
Sbjct: 365 GNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQML-QMGFRPTEYTFSTA 422
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ +C + E Q +H V++G E V+++L+ Y
Sbjct: 423 LKSCCVT----ELQQLHSVIVRMGYEDNDYVLSSLMRSY 457
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ DA+ +FDEMP++ +WN+++ + G+ + ++++ M+ + + L +F ++
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE-GVPLGLSSFPAL 188
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ACA + G +H VKLG +VN L++MY
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY 227
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM-----KSDLDLELNEL 56
G P A+ + +M N D V+WNSL+ G+ + + FS M KSD E+
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD------EV 387
Query: 57 TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ S+I+A G +H +K G + ++V NTLI+MY
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMY 431
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +F EMP++D VSW++++ G + G F ++ + NE++ V
Sbjct: 217 GELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQR-AGMSPNEVSLTGV 275
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SAC+ + + E G+ +H K G V V N LI+MY
Sbjct: 276 LSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMY 314
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%)
Query: 3 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVI 62
A P A+ L P D +N+LV G+S+ + N ++VF M + + +F VI
Sbjct: 54 ALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVI 113
Query: 63 SACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A ++ G +HC A+K G+E + V TLI MY
Sbjct: 114 KAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMY 151
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA L F+EM KD SW SL++G+ + G+ + +++ M+ + ++ N++TF+S+
Sbjct: 366 GEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE-RIKPNDVTFLSL 424
Query: 62 ISACALAKAREEGQYVHCCAV-KLGMELQVKVVNTLINM 99
+SAC+ E G ++ + K G+E + + ++ +I+M
Sbjct: 425 LSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDM 463
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+L FD M +D VSWN+++ G++ S+F +M ++ + + TF S+
Sbjct: 162 GKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTE-GKKPDCFTFGSL 220
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A + K E +H A+KLG ++ +L+N Y
Sbjct: 221 LRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAY 259
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ LFD + +D VSW +++S FS+ G + + +F M + D++ N+ T+ SV
Sbjct: 61 GDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRE-DVKANQFTYGSV 119
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ +C +EG +H K + V + L+++Y
Sbjct: 120 LKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLY 158
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
+A LF MP + V+WN+++ GFS+ G ++ F M + + NE TF I+A
Sbjct: 177 EALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAI 236
Query: 66 ALAKAREEGQYVHCCAVK-LGMELQVKVVNTLINMY 100
+ + G+ +H CA+K LG V V N+LI+ Y
Sbjct: 237 SNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFY 272
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
+A +FDE+P D +S +++ F K F + L + NE TF +VI +
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLC-LGIRPNEFTFGTVIGSS 103
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ + G+ +HC A+K+G+ V V + ++N Y
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCY 138
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G D LF+ M +D VSW SL+ + + G + F M++ + NE TF S+
Sbjct: 258 GEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNS-QVPPNEQTFASM 316
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
SACA G+ +HC + LG+ + V N+++ MY
Sbjct: 317 FSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMY 355
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
+F EMP ++ V+W ++++G G ++ FS M +L + TF + ACA +
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLR 223
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G+ +H + G + V N+L MY
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMY 254
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK-SDLDLELNELTFISVISAC 65
A+ +FD+MP+ D VSW S++ + + + +FS M+ D + + V+ AC
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G+ +H AVK + V V ++L++MY
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMY 153
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A +LF M +D +SW++++ G+ + G FS M+ + + S+
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQS-GTKPTDFALASL 417
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S E G+ VH A+ G+E V ++LINMY
Sbjct: 418 LSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMY 456
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A +F+++P+K V++N+ +SG + G + SVF++M+ E N++TF++ I+ACA
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G+ +H +K + + V LI+MY
Sbjct: 243 SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMY 276
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA + DEMP + S N+ VSG + G + +F + +N +T SV+ C
Sbjct: 84 DALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVS-GSGMNSVTVASVLGGC 142
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
E G +HC A+K G E++V V +L++MY
Sbjct: 143 G---DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMY 174
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
MG DA+ LFD M ++ ++W +++ G+ K G + +F M+ + D+++N T
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC EG +H ++ +E + + N+L++MY
Sbjct: 281 MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMY 320
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 30/125 (24%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLEL------------ 53
+A LF++MP KD VSW ++ GFS +G++ C+ +F +M ++
Sbjct: 359 EAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGY 418
Query: 54 ------------------NELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNT 95
N TF SV+SA A EG +H VK+ + + V N+
Sbjct: 419 YEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNS 478
Query: 96 LINMY 100
L++MY
Sbjct: 479 LVSMY 483
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A LFDEMP+K+ +SWN ++S + + G +S+F M + NE T + +++AC
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM-VRAGFQGNESTLVLLLNACG 261
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ +EG+ VH ++ + V + LI+MY
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ LF + ++D VSW+++++ + + G +S+F M + ++ N +T SV
Sbjct: 349 GELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR-IHIKPNAVTLTSV 407
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ CA A G+ +HC A+K +E +++ +I+MY
Sbjct: 408 LQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMY 446
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 50/94 (53%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
++++FD + + V WNS++ G+++ G + F M + ++ ++ +F + ACA
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ++G +H ++G+E V + L+ MY
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMY 145
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 3 ATPDAQLLFDEMP-NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
A A +LFD+ K VSWN +++G+ G ++ F MK + + N +TF+++
Sbjct: 552 ALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVE-KFQPNAVTFVNI 610
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A A A G VH ++ G Q V N+L++MY
Sbjct: 611 VRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMY 649
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G ++ F E+ NK VSWN+++S ++ G +S+F M+ + +L+ + ++F+SV
Sbjct: 653 GMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQEN-ELKPDSVSFLSV 711
Query: 62 ISACALAKAREEGQYV 77
+SAC A EEG+ +
Sbjct: 712 LSACRHAGLVEEGKRI 727
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 11 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 70
F+ +P KD V++N+L G+++ GD V+ MK + + T + ++ CA
Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH-GVCPDSRTMVGMLQTCAFCSD 517
Query: 71 REEGQYVHCCAVKLGMELQVKVVNTLINMY 100
G V+ +K G + + V + LINM+
Sbjct: 518 YARGSCVYGQIIKHGFDSECHVAHALINMF 547
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ LFDE+ +D VSWNS++SG+S+ G + M +F M+ + E +E T +S+
Sbjct: 181 GQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEE-GFEPDERTLVSM 239
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC+ G+ + A+ + L + + LI+MY
Sbjct: 240 LGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMY 278
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +F++M KD V+W ++++ +S+ G +F M+ + + T +V
Sbjct: 282 GDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT-GVSPDAGTLSTV 340
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SAC A E G+ + A +L ++ + V L++MY
Sbjct: 341 LSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMY 379
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G T A++LF+EM ++ VSW++++ G++ GD +++F+ M+++ L N +TF+ V
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNE-GLRPNYVTFLGV 317
Query: 62 ISACALAKAREEGQ 75
+SAC+ A EG+
Sbjct: 318 LSACSHAGLVNEGK 331
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ + LFDEMP K ++WN+++SG+S+ G + + ++ MKS + + T +SV
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS-GVCPDPFTLVSV 263
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S+CA A++ G V G V V N I+MY
Sbjct: 264 LSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMY 302
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVS--WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFI 59
G DA+ +F+E P +S +N+L+SG++ + + +F MK + + ++ +T +
Sbjct: 102 GLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK-ETGVSVDSVTML 160
Query: 60 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ C + + G+ +H VK G++ +V V+N+ I MY
Sbjct: 161 GLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMY 201
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA +F E+ KD VSWNS++SG + +FS+M++ ++ + SV+SAC
Sbjct: 257 DAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSAC 316
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A A + G++VH + G++ + +++MY
Sbjct: 317 ASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMY 351
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G + +A +F EMP +D VSW +++GF++ G + FS M D+E N T++ V
Sbjct: 155 GESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM----DVEPNLATYVCV 210
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ + G+ +H +K + ++ N LI+MY
Sbjct: 211 LVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ +FDEMP D + W +++S FSK + +F M L + TF +V++AC
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ++G+ +H + G+ V V ++L++MY
Sbjct: 276 GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMY 310
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FDEMP + VSWNS++ + G+ + + +F M+ E + T SV+SACA
Sbjct: 205 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR--SFEPDGYTMQSVLSACA 262
Query: 67 LAKAREEGQYVHC-----CAVKLGMELQVKVVNTLINMY 100
+ G + H C V + M++ VK N+LI MY
Sbjct: 263 GLGSLSLGTWAHAFLLRKCDVDVAMDVLVK--NSLIEMY 299
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ +FDEMP+++ +W+ +++G++K + +F MK + + NE +SV
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE-GVVANETVMVSV 255
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
IS+CA A E G+ + VK M + + + L++M+
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMF 294
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
D + +FDEM ++ V+W +L+SG+++ +++F M+++ + N TF + +
Sbjct: 146 DGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNE-GTQPNSFTFAAALGVL 204
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A G VH VK G++ + V N+LIN+Y
Sbjct: 205 AEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +F KD VSWNS++SG+++ G + VF MK ++++ +TFI V
Sbjct: 544 GNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR-KVKMDGVTFIGV 602
Query: 62 ISACALAKAREEGQ 75
+AC A EEG+
Sbjct: 603 FAACTHAGLVEEGE 616
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A++LFD+ K V+WNS++SG++ G + +F M+ + + L+E +F SV
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY-VRLSESSFASV 301
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I CA K + +HC VK G + L+ Y
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G +A +F + +KD V+W+++++G+++ G+ + +F + ++ NE TF S
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG-GIKPNEFTFSS 499
Query: 61 VISACALAKAR-EEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+++ CA A +G+ H A+K ++ + V + L+ MY
Sbjct: 500 ILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+L+F EM K+ +SW ++SG ++ G + +FS MK + E + F
Sbjct: 365 GHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEPCDYAFSGA 423
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I +CA+ A GQ H +K+G + + N LI MY
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
D LFDE+P +D SWN++VS K G +F M ++ T +++S+C
Sbjct: 236 DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G+ +H A+++G+ ++ V N LI Y
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFY 330
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G +A L+F + + VS+ +L+SGFS+ + VF M+ ++ NE TF++
Sbjct: 127 LGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVA 186
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+++AC G +H VK G V V N+L+++Y
Sbjct: 187 ILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLY 226
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 6 DAQLLFDEMPNK--DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS 63
DA+ +FD+ P+ + S++ G+++ G +S+F + L L+E++ +++
Sbjct: 470 DAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILA 529
Query: 64 ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
C RE G +HC A+K G + + N+LI+MY
Sbjct: 530 VCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMY 566
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
+A+ LFDEM ++ +W ++S F+K + + +S+F M + NE TF SV+ +C
Sbjct: 76 NARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMAS-GTHPNEFTFSSVVRSC 134
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A + G VH +K G E V ++L ++Y
Sbjct: 135 AGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLY 169
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 14 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 73
M +D +++ SLV+ F++ G +SV + M D + +++L+ ISA A A E
Sbjct: 488 MKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD-GIRMDQLSLPGFISASANLGALET 546
Query: 74 GQYVHCCAVKLGMELQVKVVNTLINMY 100
G+++HC +VK G V+N+L++MY
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMY 573
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA + + +D W S+VSGF + + F M+S L L+ N T+ +++S C
Sbjct: 277 DAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRS-LGLQPNNFTYSAILSLC 335
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ++ + G+ +H +K+G E V N L++MY
Sbjct: 336 SAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMY 370
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ DA+ +F+E+ D VSWN LVSG + G + + +S F M+ + E + +TF+ +
Sbjct: 577 GSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMK-ETEPDSVTFLIL 635
Query: 62 ISACALAKAREEG-QYVHCCAVKLGMELQVK 91
+SAC+ + + G +Y +E QV+
Sbjct: 636 LSACSNGRLTDLGLEYFQVMKKIYNIEPQVE 666
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ FD+MP +D +SW ++ G+ + G + +F M+S + +E T +SV++ACA
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQS-AGMIPDEFTMVSVLTACA 379
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ E G+++ K ++ V V N LI+MY
Sbjct: 380 HLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMY 413
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A LF ++ KD V W +++ G + ++ + +F M+ + ++ NE T + V
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCV 261
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SAC+ A E G++VH MEL V N LINMY
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMY 300
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G T +A+ LFD MP ++ VSWN+++ G+ + + ++M+ +++ ++ +T + +
Sbjct: 343 GLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE-NIDNVTLVWI 401
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ C+ + G+ H + G + V V N L++MY
Sbjct: 402 LNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMY 440
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ LF+EMP +D SWN++++ ++ G +F M D + E +F V
Sbjct: 110 GCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD-GVRATETSFAGV 168
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ +C L + +HC VK G V + +++++Y
Sbjct: 169 LKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVY 207
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNEL--TFISVIS 63
DA+ +FDE+ N VSWN +V + + G + +F M L+L + L T SV+
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKM---LELNVRPLNHTVSSVML 271
Query: 64 ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
AC+ + A E G+ +H AVKL + V ++ +MY
Sbjct: 272 ACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMY 308
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 2 GATPDAQLLFDEMPN-KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
G A + F +M +D VSWN+L++G ++ G +S F M+ ++ + ++ T +
Sbjct: 444 GTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ--VEAKPSKYTLAT 501
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+++ CA A G+ +H ++ G ++ V + +++MY
Sbjct: 502 LLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMY 541
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ F+ M ++ VSWN+++ GF++ G+ M +F M + +L+ +ELTF SV+S+C
Sbjct: 294 DARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE-NLQPDELTFASVLSSC 352
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A A E + V K G + V N+LI+ Y
Sbjct: 353 AKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSY 387
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD-LELNELTFIS 60
G +A+ +F+ + ++D V WN+LVS + G + + +M SD + + TF S
Sbjct: 191 GLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSS 250
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++SAC + E+G+ +H K+ + + V L+NMY
Sbjct: 251 LLSACRI----EQGKQIHAILFKVSYQFDIPVATALLNMY 286
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKR-GDLGNCMSV-FSVMKSDL--DLELNELTFISV 61
DA LFDEMP ++ V+WN L+ G +R GD + + F + L D+ L+ ++F+ +
Sbjct: 89 DADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGL 148
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I C + + G +HC VK G+E +L++ Y
Sbjct: 149 IRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFY 187
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDLDLELNELTFISVISAC 65
+Q++F+ MP K+ V WNSL++GFS G MS+F S+M++ L + ++F S++SAC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF--ISFTSLLSAC 499
Query: 66 ALAKAREEG-QYVHCCAVKLGMELQVKVVNTLINM 99
+EG +Y + + G++ +++ + ++N+
Sbjct: 500 GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FD M K+ VSW ++V G+ + G + +F M+ ++ + T ISACA
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS-GIDPDHYTLGQAISACA 382
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ EEG H A+ G+ V V N+L+ +Y
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA LF M KD VSW +++ G ++ G + F MK L++++ F SV
Sbjct: 219 GMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ-GLKMDQYPFGSV 276
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC A EG+ +H C ++ + + V + LI+MY
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G + + F+++P++D V+WN L+ G+S G +G + ++ M D L +T +++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ + G+ +H +KLG E + V + L+ MY
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMY 184
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ DA+ +FD MP ++ VS+ S+++G+S+ G + ++ M + DL ++ F S+
Sbjct: 116 GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQE-DLVPDQFAFGSI 174
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I ACA + G+ +H +KL + N LI MY
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY 213
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ A+ +FD M N+D VSW++L+ G+++ G + +F MKS +E N +TF+ V
Sbjct: 522 GSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKS-AGIEPNHVTFVGV 580
Query: 62 ISACALAKAREEG 74
++AC+ EEG
Sbjct: 581 LTACSHVGLVEEG 593
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FD++ D SWN +++G + G +SVFS M+S + + ++ S+
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP-DAISLRSL 377
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A A +G +H +K G + V N+L+ MY
Sbjct: 378 LCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMY 416
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
+FDEMP +D V+WN+++SGFS L + + +F M+ L N T + + A A
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A EG+ VH ++G + V ++++Y
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVY 250
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FD M +D VSWN+++ GF G +S+F+ M+ + + +E+T ++++SAC+
Sbjct: 463 AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ-ETGVNPDEVTLLAILSACS 521
Query: 67 LAKAREEGQ 75
+ +EG+
Sbjct: 522 HSGLVDEGK 530
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DAQ+LFD N + S+N++++G+S+ + +F + S L +E++ V AC
Sbjct: 334 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS-GLGFDEISLSGVFRAC 392
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
AL K EG ++ A+K + L V V N I+MY
Sbjct: 393 ALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A F+ MP +D VSWNS++SG+ + G+ + VF M + +E + TF ++ C+
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE-GIEFDGRTFAIILKVCS 191
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G +H V++G + V + L++MY
Sbjct: 192 FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G D++L+F++ +DFV+WN+++ G++ G + +F M + +++ N +TFIS+
Sbjct: 652 GDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE-NIKPNHVTFISI 710
Query: 62 ISACALAKAREEG-QYVHCCAVKLGMELQVKVVNTLINM 99
+ ACA ++G +Y + G++ Q+ + ++++
Sbjct: 711 LRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDI 749
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 3 ATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDLDLELNELTFISV 61
A +A +FDEM +D VSWN++++ + G + +F S+++S +E +E TF S+
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS--RIEPDEFTFGSI 489
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC + G +H VK GM V +LI+MY
Sbjct: 490 LKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMY 527
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G D + +FD M N++ V+W S+++ ++ G +S+F +MK L N LT +S+
Sbjct: 333 GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR-HLIANNLTVVSI 391
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC A G+ +H +K +E V + +TL+ +Y
Sbjct: 392 LRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLY 430
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A FD M KD +SW +++S S++G + +F M + L NE T S+
Sbjct: 232 GELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP-NEFTVCSI 290
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC+ KA G+ VH VK ++ V V +L++MY
Sbjct: 291 LKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMY 329
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G + DA + ++P++D VSW +++SG S G + M + +E N T+ S
Sbjct: 434 GESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE-GVEPNPFTYSSA 492
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ACA +++ G+ +H A K V V + LI+MY
Sbjct: 493 LKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMY 531
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G ++ +F++M KD VSWNSL+S +S+ G+ N ++ + M+ + + + TF +V
Sbjct: 538 GTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAV 597
Query: 62 ISACALAKAREEG 74
+SAC+ A EEG
Sbjct: 598 LSACSHAGLVEEG 610
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFS-VMKSDLDLELNELTFIS 60
G A LLF+ K+ +SWN+++SGF G + FS +++S++ + + T +
Sbjct: 435 GQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLST 494
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++S C + G H ++ G + + N LINMY
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMY 534
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 10 LFDEMPNKDFVS-WNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 68
+FD+MP +D V+ WN++++G + G + +F M L + ++ F +++S C
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHK-LGVRHDKFGFATILSMCDYG 203
Query: 69 KAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ + G+ VH +K G + VVN LI MY
Sbjct: 204 -SLDFGKQVHSLVIKAGFFIASSVVNALITMY 234
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G +A+ +F + +D V WN+L++G+++ G + + F M+ + E + +T S
Sbjct: 221 IGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGE-GYEPDAVTVSS 279
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++SACA + + G+ VH G+EL V N LI+MY
Sbjct: 280 ILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMY 319
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A LF MP + VSWN L+SGF +G + M+ + L L+
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQRE-GLVLDGFALPCG 244
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC+ G+ +HCC VK G+E ++ LI+MY
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMY 283
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA +FDEM ++ V+W ++VSG++ G + ++ M + NE + +V+ AC
Sbjct: 58 DAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKAC 117
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
L + G V+ K + V ++N++++MY
Sbjct: 118 GLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMY 152
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G + +LFD M +D VSW ++ GF + G + F M ++ +E N++TF+ +
Sbjct: 492 GEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM-INIGIEPNKVTFLGL 550
Query: 62 ISACALAKAREEGQ 75
+SAC + EE +
Sbjct: 551 LSACRHSGLLEEAR 564
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+ LFD MP ++ VSWNSL++G++ G + F M D + +E+T IS
Sbjct: 344 IGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMIS 403
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKV----VNTLINMY 100
V+SAC E G C V + Q+K+ +LI MY
Sbjct: 404 VLSACGHMADLELGD----CIVDYIRKNQIKLNDSGYRSLIFMY 443
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ +FDEM +D VS+N+L + F+ GD +++ S MK D +E + +T+ SV
Sbjct: 447 GNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK-DEGIEPDRVTYTSV 505
Query: 62 ISACALAKAREEGQYV 77
++AC A +EGQ +
Sbjct: 506 LTACNRAGLLKEGQRI 521
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
+A+ FD MP K VSWN+++SG+++ G + + +F+ M L + NE T++ VISAC
Sbjct: 216 NARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLR-LGVRPNETTWVIVISAC 274
Query: 66 AL 67
+
Sbjct: 275 SF 276
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+ LF EMP K+ VSW +L++G+ ++G + +F M + L ++ + TF S
Sbjct: 258 LGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA-LGVKPEQFTFSS 316
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A A + G+ +H ++ + V+++LI+MY
Sbjct: 317 CLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+++FD MP +D VSWN++V G+++ G+L + + + ++ NE +F +++AC
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFAGLLTACV 190
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ + + H + G V + ++I+ Y
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAY 224
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FD++P K+ +SWN+L+ G++ G + + +F M + ++ N +TF++V
Sbjct: 374 GRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA-ANVAPNHVTFLAV 432
Query: 62 ISACALAKAREEG 74
+SACA + E+G
Sbjct: 433 LSACAYSGLSEQG 445
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDL-DLELNELTFIS 60
G DA+ LFDE+P ++ S+ S++SGF G+ +F +M +L D E + TF
Sbjct: 172 GMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETH--TFAV 229
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ A A + G+ +H CA+KLG+ V LI+MY
Sbjct: 230 MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMY 269
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
LFD + KD V WN +++G++K G L + + FSVM+ D + N +TF V+S CA
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD-QISPNAVTFDCVLSVCASKL 253
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G +H V G++ + + N+L++MY
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVF-SVMKSDLDLELNELTFI 59
+G T A +F P K+ V+W ++++G+ + GD + F +MKS +D + +
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD--HFAYG 341
Query: 60 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+V+ AC+ G+ +H C + G + V N L+N+Y
Sbjct: 342 AVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLY 382
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FD MP D V+WN++++ +S+ G +++F+ ++ D + ++ +F ++
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS-DAKPDDYSFTAI 76
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S CA + G+ + ++ G + V N+LI+MY
Sbjct: 77 LSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMY 115
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
+++LF+ +D V W+S++SG+++ GD M++ + M+ + +E N +T ++++SAC
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE-GIEANSVTLLAIVSACT 364
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ VH +K G + + N LI+MY
Sbjct: 365 NSTLLSFASTVHSQILKCGFMSHILLGNALIDMY 398
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ A+ +F E+ KD VSW+S+++ + G + +F M E++++ F+++
Sbjct: 402 GSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKG-GHEVDDMAFLAI 460
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINM 99
+SAC A EE Q + A K M + ++ IN+
Sbjct: 461 LSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINL 498
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
D++ +FDE ++ W +L+SG+S + +S+FS M + L N+ TF S +++C
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILP-NQSTFASGLNSC 336
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ + G+ +H AVKLG+E V N+L+ MY
Sbjct: 337 SALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMY 371
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 30/129 (23%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSD------------- 48
G A+ LF +MP KD +WNS+V G+ + G + + + +F M
Sbjct: 142 GKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLD 201
Query: 49 --------LDLELNELT---------FISVISACALAKAREEGQYVHCCAVKLGMELQVK 91
LDL N L F VI+ACA A A G VH +KLG +
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 92 VVNTLINMY 100
V +LI Y
Sbjct: 262 VSASLITFY 270
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 14 MPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREE 73
+P + VSW ++VS +++ G+ + +FS M+ +D++ + + +SV++A + ++
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK-MDVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 74 GQYVHCCAVKLGMELQVKVVNTLINMY 100
G+ +H VK+G+E++ ++ +L MY
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMY 267
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FD++P WN+++ G+S+ + + ++S M+ + + TF ++ AC+
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACS 130
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G++VH +LG + V V N LI +Y
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALY 164
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A++LFD+M + + + WN+++SG++K G + +F M + D+ + ++ S
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK-DVRPDTISITSA 329
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ISACA + E+ + ++ + V + + LI+M+
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 368
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 4 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS 63
T A+ LFD MP ++ VSW +++ G+ G + +F M + NE V
Sbjct: 85 TVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFK 144
Query: 64 ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+C+ + EEG+ H C +K G+ V NTL+ MY
Sbjct: 145 SCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMY 181
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 53.5 bits (127), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
+A++LF E N D V+WN++++G+++ D + +F++M + ++ T +V C
Sbjct: 470 EAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS-DDFTLATVFKTC 527
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A +G+ VH A+K G +L + V + +++MY
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMY 562
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G AQ FD +P D V+W +++SG + G+ VFS M+ + + +E T ++
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL-MGVLPDEFTIATL 624
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A + A E+G+ +H A+KL V +L++MY
Sbjct: 625 AKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 50 DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
D+E +++TFI +++ + GQ VHC A+KLG++L + V N+LINMY
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMY 360
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGD-----LGNCMSVFSVMKSDLDLELNEL 56
G+ A+ +FD+MP++D VSWNS+++ +++ + + +F +++ D+ + + +
Sbjct: 88 GSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDV-VYTSRM 146
Query: 57 TFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
T ++ C + + H A K+G++ V L+N+Y
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY 190
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G +A +FD MP +D VSWN+++S ++G + V+ M D L + T S
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLP-SRFTLAS 143
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+SAC+ G H AVK G++ + V N L++MY
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMY 183
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ LFD MP +D VSWNSL+SG+++ + +F M + L L+ + + +S +SACA
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVA-LGLKPDNVAIVSTLSACA 260
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ++G+ +H + + + + L++ Y
Sbjct: 261 QSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFY 294
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ D++ +FD + +K+ WN+++S +S+ + F M S DL + T+ V
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I ACA G VH VK G+ V V N L++ Y
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY 232
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM---KSDLDLELNELTF 58
G DA LFD MP ++ VSWNS++ FS G + M D + T
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 59 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++V+ CA + G+ VH AVKL ++ ++ + N L++MY
Sbjct: 296 VTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMY 337
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 8 QLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACAL 67
Q LFD M +K VSWN++++G+ + G + VF M ++L ++ + V AC+L
Sbjct: 551 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL-YGIQLCGISMMPVFGACSL 609
Query: 68 AKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G+ H A+K +E + +LI+MY
Sbjct: 610 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM-KSDLDLELNELTFIS 60
G +AQ++F NK+ VSWN++V GFS GD V M D++ +E+T ++
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ C + +HC ++K V N + Y
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A +FD+MP +D +SW ++++GF K+G + F M+ ++ + + I+
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPDYVAIIAA 212
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++AC A G +VH + + V+V N+LI++Y
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLY 251
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 4 TPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD--LELNELTFISV 61
+ DA +FDE+P +D VSWN L S + + + + +F MK+D+D ++ + +T +
Sbjct: 164 STDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLA 223
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ ACA A + G+ VH + G+ + + NTL++MY
Sbjct: 224 LQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 7 AQLLF---DEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVIS 63
A+ LF E NK+ +WN+++ G+ K C+ +F ++ +L +E++ + SVIS
Sbjct: 385 AEKLFCRISEEGNKE--AWNTMLKGYGKMKCHVKCIELFRKIQ-NLGIEIDSASATSVIS 441
Query: 64 ACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+C+ A G+ +HC VK ++L + VVN+LI++Y
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMK---SDLDLELNELTF 58
G DA L+FDEMP++D V+W +++SG + G+ + M SD+D + N T
Sbjct: 175 GFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD-KPNPRTL 233
Query: 59 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
AC+ A +EG+ +H AVK G+ V +++ + Y
Sbjct: 234 ECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFY 275
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G ++ LFD KD V WN ++SG+ GD+ + +++F M+ D++ TF+++
Sbjct: 582 GHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEES-DVKPTGPTFLAL 640
Query: 62 ISACALAKAREEGQ 75
+SAC A E+G+
Sbjct: 641 LSACTHAGLVEQGK 654
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 5 PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 64
P AQ++FD D WN ++ GFS + + ++ M N TF S++ A
Sbjct: 66 PYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCS-SAPHNAYTFPSLLKA 124
Query: 65 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
C+ A EE +H KLG E V VN+LIN Y
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSY 160
Score = 51.6 bits (122), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 30/124 (24%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM----------------KSDL- 49
A LLFD +P D VSWNS++ G+ K G + +++F M ++D+
Sbjct: 169 AHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMN 228
Query: 50 -------------DLELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTL 96
D+E + ++ + +SACA A E+G+++H K + + + L
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288
Query: 97 INMY 100
I+MY
Sbjct: 289 IDMY 292
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM 45
G +A+ +FD++P KD VSWN ++S ++K+GD+GN S+FS M
Sbjct: 184 GELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM-KSDLDLELNELTFIS 60
G D++ FDEMP K+ V+ NSL+ G++ +G + +++F M N +TF+S
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 418
Query: 61 VISACALAKAREEGQYV 77
++SAC+ A A E G +
Sbjct: 419 LLSACSRAGAVENGMKI 435
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ LFDE+P ++ +WN+ +S G + F + +D N +TF + ++AC
Sbjct: 161 DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR-IDGHPNSITFCAFLNAC 219
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G +H ++ G + V V N LI+ Y
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY 254
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
++++F EM K+ VSW SLV+ + + + ++ + D+ +E ++ SV+SACA
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI-VETSDFMISSVLSACA 321
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
E G+ +H AVK +E + V + L++MY
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMY 355
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+L+ P ++ VSW SL+SG ++ G + F M+ + + N+ TF A A
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE-GVVPNDFTFPCAFKAVA 119
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G+ +H AVK G L V V + +MY
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMY 153
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ A +FDEMP +D VSWN ++ FS G +S++ M ++ + + T +++
Sbjct: 156 GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNE-GVCGDSYTLVAL 214
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S+CA A G +H A + E V V N LI+MY
Sbjct: 215 LSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ +FD M ++ +W++++ +S+ +F +M D L ++ F +
Sbjct: 129 GCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLP-DDFLFPKI 187
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ CA E G+ +H +KLGM ++V N+++ +Y
Sbjct: 188 LQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ +FD + NKD +WNS+++G+ + G G +F+ M+ D +L N +T+ ++
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ-DANLRPNIITWNTM 459
Query: 62 ISACALAKAREEGQ 75
IS K +EG+
Sbjct: 460 IS--GYIKNGDEGE 471
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+L+FD +KD + WNS++SG++ G + +F M S + N++T I++
Sbjct: 380 GELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP-NKVTLIAI 438
Query: 62 ISACALAKAREEG 74
++AC+ A EEG
Sbjct: 439 LTACSYAGKLEEG 451
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+ +FD M ++D +W ++ + ++G + +F+ M+ + + + IS
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ-GVRPSFPSLIS 336
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++S CA + + G+ VH V+ + V V + L+ MY
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMY 376
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 14/105 (13%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G D+Q +F MP +++VSWNS+++ F++ G + ++ M + L+++ ++TF+S+
Sbjct: 406 GDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT-LEVKPTDVTFLSL 464
Query: 62 ISACA----LAKARE---EGQYVHCCAVKLGMELQVKVVNTLINM 99
+ AC+ + K RE E + VH G+E + + +I+M
Sbjct: 465 LHACSHVGLIDKGRELLNEMKEVH------GIEPRTEHYTCIIDM 503
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G + + +FD M +++ ++ +++SG + + + +FS+M+ L + N +T++S
Sbjct: 204 GCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGL-VHPNSVTYLSA 262
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++AC+ ++ EGQ +H K G+E ++ + + L++MY
Sbjct: 263 LAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMY 301
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G T A+ +F+E+ +D +S N++++GF+ G + + M+S ++ + T +S+
Sbjct: 340 GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSI 399
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQ-VKVVNTLINMY 100
S C EG+ VH V++ M+ + ++V+N++I+MY
Sbjct: 400 TSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMY 439
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNEL-TFIS 60
G T A+LLF ++D VSWNS++S FS+ G ++F + S+ L T ++
Sbjct: 443 GLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLA 502
Query: 61 VISACALAKAREEGQYVHCCAVKLG 85
++++C + + G+ VHC KLG
Sbjct: 503 ILTSCDSSDSLIFGKSVHCWLQKLG 527
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +F M ++D VSWN++++ G + F M E + +TF VISAC+
Sbjct: 242 AECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS-GQEADTVTFSCVISACS 300
Query: 67 LAKAREEGQYVHCCAVKLGM--ELQVKVVNTLINMY 100
+ G+ +H +K G E V V N++I+MY
Sbjct: 301 SIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMY 336
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 1 MGATPDAQLLFDEMP-NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFI 59
+G A L + M +D SWNS++SG + G + F M + + + +T +
Sbjct: 526 LGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLL 585
Query: 60 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ISA +G+ H A+K EL ++ NTLI MY
Sbjct: 586 GTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMY 626
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ +FD M ++ V+WNSL+S SK+ + ++F M+ ++ + + T ++
Sbjct: 285 GLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM-IGFSWATLTTI 343
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ AC+ A G+ +H +K + V ++N+L++MY
Sbjct: 344 LPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMY 382
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A LFDEMP +D ++WN +V + G+ + +F M+ + + T + ++ C+
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFS-GAKAYDSTMVKLLQVCS 100
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ EG+ +H ++LG+E V + N+LI MY
Sbjct: 101 NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMY 134
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSG--FSKRGDLGNCMSVFSVMKSDLDLELNELTFI 59
G+ DAQ +FDE + + SWN+L+ G S + + +S F+ M+ +L ++LN +
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMR-ELGVDLNVYSLS 218
Query: 60 SVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+V + A A A +G H A+K G+ V + +L++MY
Sbjct: 219 NVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMY 259
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ +FD++ KD VSW S++ + K S+FS + + NE TF V
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE-RPNEYTFAGV 325
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++ACA E G+ VH ++G + ++L++MY
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMY 364
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G +A+ LFDEM KD SW ++V+G+ K+ + ++S+M+ + N T
Sbjct: 164 VGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++A A K G+ +H V+ G++ + ++L++MY
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 263
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+++F++MP ++ VSW ++++ + K +F M+ D D++ NE T ++++ A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD-DVKPNEFTIVNLLQAST 262
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G++VH A K G L + LI+MY
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMY 296
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G T A L+F+++ + +WN ++ S + +F +M + ++ TF V
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I AC + + G VH A+K G V NTL+++Y
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLY 164
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A +F + N + VSWNS++SG S+ G M ++ + +E TF +
Sbjct: 349 GDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
ISA A + G+ +H KLG E V V TL++MY
Sbjct: 409 ISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMY 447
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ A+ +FD+MP+++ VS+N+L S +S+ D + + + ++ N TF S+
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ CA+ + G ++ +KLG V V +++ MY
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMY 244
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
AQ +FD M +D V W ++ G S+ G+ + F M + + + + SVI AC+
Sbjct: 456 AQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRS-DGFSLSSVIGACS 514
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+G+ HC A++ G + + V L++MY
Sbjct: 515 DMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMY 548
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ LFDEM +D +SW+ ++ + + + + +F M + E + +T SV+ AC
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 67 LAKAREEGQYVHCCAVKLGMEL-QVKVVNTLINMY 100
+ + + G+ VH +++ G +L V V N+LI+MY
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMY 272
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
+FDE ++ VSWNS+++GF + +F +M + +E++E+T +S++ C +
Sbjct: 284 VFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA-VEVDEVTVVSLLRVCKFFE 342
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ +H ++ G E +++LI+ Y
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAY 373
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA LFD+MP ++ +SW +++S +SK + + +M D ++ N T+ SV+ +C
Sbjct: 114 DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD-NVRPNVYTYSSVLRSC 172
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ + +HC +K G+E V V + LI+++
Sbjct: 173 ---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVF 204
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ DA +F++M +D ++W++++SG ++ G + +F MKS + N +T + V
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS-GTKPNYITIVGV 365
Query: 62 ISACALAKAREEGQY 76
+ AC+ A E+G Y
Sbjct: 366 LFACSHAGLLEDGWY 380
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G DA +FDEM D + WNS++ GF++ + +F MK + T S
Sbjct: 207 LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR-AGFIAEQATLTS 265
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+ AC E G H VK +L + N L++MY
Sbjct: 266 VLRACTGLALLELGMQAHVHIVKYDQDLILN--NALVDMY 303
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN-CMSVFSVMKSDLDLELNELTFIS 60
G+ D + +FD M + +SW +L++G+ K +L +++FS M + +E N TF S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
AC G+ V A K G+ V N++I+M+
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF 418
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DAQ F+ + K+ VS+N+ + G + + + S + ++ +L ++ TF S++S
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI-TERELGVSAFTFASLLSGV 484
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A + +G+ +H VKLG+ V N LI+MY
Sbjct: 485 ANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ A +F+ M N++ +SW S+++GF+K G + F+ M + ++ NE+T++++
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE-GVKPNEVTYVAI 581
Query: 62 ISACALAKAREEG 74
+SAC+ EG
Sbjct: 582 LSACSHVGLVSEG 594
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA LFDE+P++ V+W +L SG++ G + +F M ++ ++ + + V
Sbjct: 160 GRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKM-VEMGVKPDSYFIVQV 218
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SAC + G+++ ++ M+ V TL+N+Y
Sbjct: 219 LSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G T +A+L+ D + KD V +L+ G+S++G+ + F M + ++ NE T+ SV
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVE-KVQPNEYTYASV 273
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ +C K G+ +H VK G E + +L+ MY
Sbjct: 274 LISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMY 312
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ LFD KD V+WN+++SG+ G + +F M+ D + +T +S++SACA
Sbjct: 228 ARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMR-DAGEHPDVVTILSLLSACA 286
Query: 67 LAKAREEGQYVH-----CCAVKLGMELQVKVVNTLINMY 100
+ E G+ +H +V + + + N LI+MY
Sbjct: 287 VLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMY 325
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA +F+ M +K V+W+S+V+G+ + + + ++ + + LE N+ T SV
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQR-MSLEQNQFTLSSV 269
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I AC+ A EG+ +H K G V V ++ ++MY
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMY 308
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ ++ ++F E+ K+ WN+++SGF+K M +F M+ D + NE+TF S+
Sbjct: 312 GSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD-GMHPNEVTFSSL 370
Query: 62 ISACALAKAREEGQ 75
+S C EEG+
Sbjct: 371 LSVCGHTGLVEEGR 384
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FD M + VSWN+++ +++ + +F M+++ + +E T SV+SAC
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNE-GFKFSEFTISSVLSACG 173
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ E + +HC +VK ++L + V L+++Y
Sbjct: 174 VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLY 207
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA +F+ M N D V+W + +SG + G+ + +F M S ++ N +TFI+V
Sbjct: 436 GCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS-CGMKPNSVTFIAV 494
Query: 62 ISACALAKAREEGQYVHC 79
++AC+ A E+G+ HC
Sbjct: 495 LTACSHAGLVEQGK--HC 510
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FD+M K V+ L+ G+++ G + + +F + ++ +E + F V+ ACA
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTE-GVEWDSFVFSVVLKACA 296
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G+ +H C KLG+E +V V L++ Y
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFY 330
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Query: 2 GATPDAQLLFDEMP-NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
G +++ +FDEM ++ ++WN+++ G++ G+ +++F MKS+ + + +TF+S
Sbjct: 457 GEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSN-GIYPSHITFVS 515
Query: 61 VISACALAKAREE--GQYVHCCAVKLGMELQVKVVNTLINM 99
V++ACA A +E Q+V +V +E Q++ ++L+N+
Sbjct: 516 VLNACAHAGLVDEAKAQFVSMMSV-YKIEPQMEHYSSLVNV 555
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ +FDE+P D V W+ L++G+ + G + VF M LE +E + + ++AC
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVK-GLEPDEFSVTTALTAC 228
Query: 66 ALAKAREEGQYVH-CCAVKLGMELQVKVVNTLINMY 100
A A +G+++H K +E V V L++MY
Sbjct: 229 AQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMY 264
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSG--FSKRGD--------LGNCMSVFSVMKSDLD 50
+G A +F +M ++D V+WN++++G FS+ + + N S S +
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 51 LELNELTFISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
L+ N +T ++++ +CA A +G+ +H A+K + V V + L++MY
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
+ +FD M ++ WN++++G+S+ + +F M+ L N T V+ AC
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A + +H VK G++ V NTL++MY
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA--- 66
+FD + ++ VSWNSL+S + F M D ++E + T +SV++AC+
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML-DENVEPSSFTLVSVVTACSNLP 213
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ + G+ VH ++ G EL ++NTL+ MY
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 1 MGATPDAQLLFDEMP--NKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTF 58
+G +A+ L + MP ++ VSW ++SG++K G + VF M + ++E +E+T
Sbjct: 195 VGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME-NVEPDEVTL 253
Query: 59 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
++V+SACA + E G+ + GM V + N +I+MY
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMY 295
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
+ ++LFDEMP DFVS+N ++S +S+ + F M+ + + F +++S
Sbjct: 303 ETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC-MGFDRRNFPFATMLSIA 361
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A + + G+ +HC A+ + + V N+L++MY
Sbjct: 362 ANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
+A+L+F +P + VSW +L+SG+ ++G G + +F+ M+ +L ++ TF +V+ A
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS-NLRADQSTFATVLKAS 462
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A + G+ +H ++ G V + L++MY
Sbjct: 463 ASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMY 497
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 9 LLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALA 68
+LF+E+P KD V++N+L++G+ K G + +F M+ + ++ TF V+ A
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQS-GHQPSDFTFSGVLKAVVGL 263
Query: 69 KAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
GQ +H +V G V N +++ Y
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ DA +F+EMP+++ VSWN+L+S + GD + F+ M + L+ + ++ + V
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM-IESGLQPDSVSILGV 559
Query: 62 ISACALAKAREEGQYVHCCAVKLGME 87
++AC+ HC V+ G E
Sbjct: 560 LTACS-----------HCGFVEQGTE 574
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
DA+ +FDE+P D V W+ L++G+ + G + VF M +E +E + + ++AC
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVR-GIEPDEFSVTTALTAC 228
Query: 66 ALAKAREEGQYVH-CCAVKLGMELQVKVVNTLINMY 100
A A +G+++H K +E V V L++MY
Sbjct: 229 AQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMY 264
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 5 PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 64
PDA FD + +KD VSWN++++GFS+ + + F +M + E N T +V+
Sbjct: 175 PDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKE-PTEPNYATIANVLPV 233
Query: 65 CALAK---AREEGQYVHCCAVKLG-MELQVKVVNTLINMY 100
CA A G+ +H V+ ++ V V N+L++ Y
Sbjct: 234 CASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFY 273
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G +A LF M +KD VSWN +++G++ + +F + D+ + +T IS
Sbjct: 276 VGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIIS 335
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQ-VKVVNTLINMY 100
++ CA G+ +H ++ L+ V N LI+ Y
Sbjct: 336 ILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFY 376
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS 47
G + DA LFDEMP ++ VSWN+LV+G + GD+ VF M S
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS 197
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD-LELNELTFIS 60
G +A LF EMP ++ VSW +++SGF+ + +F MK D+D + N T IS
Sbjct: 245 GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 61 VISACA--LAKAREEGQYVHCCAVKLGMEL---QVKVVNTLINMY 100
+ AC + R G+ +H + G E ++ +L++MY
Sbjct: 305 LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
GA DA +F +M KD VSWNS++ G S G +++F M D + N +TF+ V
Sbjct: 517 GAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML-DSGKKPNSVTFLGV 575
Query: 62 ISACA 66
+SAC+
Sbjct: 576 LSACS 580
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ +FD MP + VS+N ++ G+++ G + ++ M D + N++TF++V
Sbjct: 395 GNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM-LDSGIAPNKITFVAV 453
Query: 62 ISACALAKAREEGQ 75
+SACA +EGQ
Sbjct: 454 LSACAHCGKVDEGQ 467
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ LFDE+P D VS+N+L+SG++ + M +F M+ L E++ T +I+AC
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK-LGFEVDGFTLSGLIAAC- 150
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ + +HC +V G + V N + Y
Sbjct: 151 -CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYY 183
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 6 DAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISAC 65
D++ +F + +D +SWNSLV+G+ + G + +F M + ++ + F SVI AC
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPAC 353
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A G+ +H ++ G + + + L++MY
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMY 388
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA+ +FDEMP +D ++ ++ G + F M D L+L+ S+
Sbjct: 65 GKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKD-GLKLDAFIVPSL 123
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ A RE G+ +HC +K E +V++LI+MY
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMY 162
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A +LF + +D + WN+++SG+ ++G + ++ M+ + + ++ TF SV
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN-RIVPDQYTFASV 215
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
AC+ E G+ H +K ++ + V + L++MY
Sbjct: 216 FRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMY 254
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 5 PDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 64
P + +F MP ++ SWN ++ FS+ G + +F M + + ++ T ++ A
Sbjct: 84 PTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRA 143
Query: 65 CALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
C+ ++ + G +H +KLG + V + L+ MY
Sbjct: 144 CSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY 179
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A +F+EM ++ VSW+S++ G++ G+ + F M+ + + N++TF+ V+SAC
Sbjct: 274 ASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR-EFGVRPNKITFVGVLSACV 332
Query: 67 LAKAREEGQ 75
EEG+
Sbjct: 333 HGGLVEEGK 341
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G +A+ +FDE P + SWN+++ G + G + +F MK LE ++ T +SV
Sbjct: 166 GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRS-GLEPDDFTMVSV 224
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQ--VKVVNTLINMY 100
++C +H C ++ E + + ++N+LI+MY
Sbjct: 225 TASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMY 265
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISA 64
AQ FD MP KD SWN++++G+++RG++ +F M +E NE+++ ++IS
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM-----MEKNEVSWNAMISG 195
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G DA LF+ M KD V+WN+++SG+++ G+ + +F M D + + +TF++V
Sbjct: 333 GELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM-IDNKIRPDWITFVAV 391
Query: 62 ISACALA 68
+ AC A
Sbjct: 392 LLACNHA 398
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 11 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLD--LELNELTFISVISACA 66
F MP D VSW ++++GFSK+G + VF M + + NE TF+SV+S+CA
Sbjct: 175 FQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 2 GATPDAQLLFDEMPNK-DFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
G DA+ +FDEMP D V++++L++G+ + + +F +M+ ++ +N T +S
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS-EVVVNVSTLLS 232
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SA + + H +K+G++L + ++ LI MY
Sbjct: 233 FLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMY 272
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A+ +FD KD V+WN ++ ++K G L C+ + MK + ++ N TF+ +
Sbjct: 276 GGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE-KMKPNSSTFVGL 334
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S+CA ++A G+ V + + L + L++MY
Sbjct: 335 LSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMY 373
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 54/137 (39%), Gaps = 38/137 (27%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVM---------------- 45
G DA+ LF ++ NK SWNSL++ F G L +S+FS +
Sbjct: 343 GKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTW 402
Query: 46 -----------KSDLDLEL-----------NELTFISVISACALAKAREEGQYVHCCAVK 83
+ D LE N +T ++S CA A G+ +H ++
Sbjct: 403 TSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIR 462
Query: 84 LGMELQVKVVNTLINMY 100
M + V N L+NMY
Sbjct: 463 TSMSENILVQNALVNMY 479
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G + L+F+ + +KD +SWNS++ G+ G +S+F M S + + ++V
Sbjct: 483 GLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISS-GFHPDGIALVAV 541
Query: 62 ISACALAKAREEGQYV-HCCAVKLGMELQ 89
+SAC+ A E+G+ + + + + G+E Q
Sbjct: 542 LSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FD MP ++ +SW+S+++ F G + F MKS ++ N +TF+S++SAC+
Sbjct: 366 ARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQ-NVVPNSVTFVSLLSACS 424
Query: 67 LAKAREEG 74
+ +EG
Sbjct: 425 HSGNVKEG 432
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G AQ +FDE+P ++ V W L+ G+ K +F +M+ D L L+ LT I
Sbjct: 157 LGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMR-DTGLALDALTLIC 215
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVN-TLINMY 100
++ AC A + G+ VH +++ Q + ++I+MY
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMY 256
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FDEMP ++ V+W+ ++ G+++ G+ + +F + +L +N+ +F SVIS CA
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE-NLAVNDYSFSSVISVCA 228
Query: 67 LAKAREEGQYVH 78
+ E G+ +H
Sbjct: 229 NSTLLELGRQIH 240
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKS-----DLDLELNEL 56
G T A+ LFDE KD ++ S++ G++ G + +F MK+ D + N++
Sbjct: 218 GETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDV 277
Query: 57 TFISVISACALAKAREEGQ 75
TFI V+ AC+ + EEG+
Sbjct: 278 TFIGVLMACSHSGLVEEGK 296
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G A FDEM +D V++N L+SG S+ G + +++ M S L + TF SV
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS-CGLRESASTFPSV 118
Query: 62 ISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+S C+ EG VHC + LG + V + L+ +Y
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLY 157
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 11 FDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKA 70
F+ +P KD +SWNS+VS + G + + + +FS M+ + F+S ++ C+
Sbjct: 272 FNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQF-WGKRPSIRPFMSFLNFCSRNSD 330
Query: 71 REEGQYVHCCAVKLGMEL-QVKVVNTLINMY 100
+ G+ +HC +K+G ++ + V + LI+MY
Sbjct: 331 IQSGKQIHCYVLKMGFDVSSLHVQSALIDMY 361
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+ LFD+MP++D V++NS+++G+ + + +FS M+ + L ++ T +
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 61 VISACA----LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
V+ A A L+KA + Y+ LG +L V LI+MY
Sbjct: 356 VLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGV----ALIDMY 395
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACA 66
A+ +FDE+P ++ + N ++ + G G + VF M ++ + TF V+ AC+
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLKACS 151
Query: 67 LAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+ G+ +H A K+G+ + V N L++MY
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMY 185
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
+F+ + D V+ +SL++G+S+ G+ + +F+ ++ L I V+ +CA
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI-VLGSCAELS 322
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
G+ VH ++LG+EL +KV + LI+MY
Sbjct: 323 DSVSGKEVHSYVIRLGLELDIKVCSALIDMY 353
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELN---ELTF 58
G +A+ LFD + K+ V W ++ G+ +L SV + ++ + E N L
Sbjct: 340 GKMVEAKRLFDSLSEKNLVVWTAMFLGYL---NLRQPDSVLELARAFIANETNTPDSLVM 396
Query: 59 ISVISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
+SV+ AC+L E G+ +H +++ G+ + K+V ++MY
Sbjct: 397 VSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMY 438
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDL-ELNELTFISVISAC 65
A+ LFD +P V WN+++ GF + +S MK + T+ S + AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 66 ALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A K + G+ VHC ++ V N+L+NMY
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY 152
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 17 KDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAKAREEGQY 76
+D +WNS++SG+++ G VF M + ++ N +T S++ AC+ + + G+
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKML-EQNIRPNAVTVASILPACSQIGSVDLGKQ 542
Query: 77 VHCCAVKLGMELQVKVVNTLINMY 100
+H +++ ++ V V + L++MY
Sbjct: 543 LHGFSIRQYLDQNVFVASALVDMY 566
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%)
Query: 10 LFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISVISACALAK 69
+F+++ +K SW+S+VS + G C+ +F M S+ +L+ E +S + ACA
Sbjct: 189 VFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTG 248
Query: 70 AREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
A G +H ++ EL + V +L++MY
Sbjct: 249 ALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 1 MGATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFIS 60
+G A+ +FDE+P + +NS++ +S+ + + ++ M ++ ++ + TF
Sbjct: 63 IGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAE-KIQPDSSTFTM 121
Query: 61 VISACALAKAREEGQYVHCCAVKLGMELQVKVVNTLINMY 100
I AC E+G+ V C AV G + V V ++++N+Y
Sbjct: 122 TIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLY 161
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 2 GATPDAQLLFDEMPNKDFVSWNSLVSGFSKRGDLGNCMSVFSVMKSDLDLELNELTFISV 61
G+ QL+FD M ++D V+W+SL+S ++ GD + + F M+ + +++ F++V
Sbjct: 231 GSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMEL-AKVTPDDIAFLNV 289
Query: 62 ISACALAKAREEG 74
+ AC+ A +E
Sbjct: 290 LKACSHAGLADEA 302
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 7 AQLLFDEMPNKDFVSWNSLVSGFSKRGDLGN-----CMSVFSVMK-SDLDLELNELTFIS 60
A+ +FDEMP + V+WN+++ G+ D GN M +F + + T +
Sbjct: 166 ARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVC 225
Query: 61 VISACALAKAREEGQYVHCCAVKLGM--ELQVKVVNTLINMY 100
V+SA + E G VH KLG E+ V + L++MY
Sbjct: 226 VLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMY 267