Miyakogusa Predicted Gene
- Lj0g3v0120479.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0120479.1 Non Chatacterized Hit- tr|I1KZ45|I1KZ45_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,34.62,3e-19,no
description,NULL; FBD,FBD; domain in FBox and BRCT domain containing
pl,FBD; seg,NULL,CUFF.7168.1
(196 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G56570.1 | Symbols: | Leucine-rich repeat (LRR) family prote... 51 4e-07
AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 1e-06
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 2e-06
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 2e-06
AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 3e-06
AT5G56400.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 48 4e-06
AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 4e-06
>AT5G56570.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr5:22902736-22904404 FORWARD LENGTH=439
Length = 439
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 78 HLRHLTLSGAYRNSHLTLLMLKNCPKLQSFKLC----GSFGAKDVLTYPQFVPECLTSCL 133
HL+ T S ++N L ML + P L+S L K V P VPECL++ L
Sbjct: 319 HLKLCTCSAGWQN--LLACMLNDAPNLRSLTLKLRQKSDVNPKKVWEKPTVVPECLSTRL 376
Query: 134 SKCYLERYQFTESDLKFAKYIMQNSTYLQVMKIGDASPNQSEVLKELLALIPRKSASCEL 193
Y+ TE + YI+ N+T+LQ NQ + L + R S CE
Sbjct: 377 EILKWRDYEGTEHEKDMVGYILANATFLQRATFSTKDRNQCDSRFSELQSMERVSEICEF 436
Query: 194 SF 195
F
Sbjct: 437 VF 438
>AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15449279-15450601 REVERSE LENGTH=379
Length = 379
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 13/177 (7%)
Query: 25 LPKLARADMDFSWLETEDGNNLKIILKAISNVEFLTIDLIGXXXXXXXXXXXXHLRHLTL 84
+PKL A +D E N+LK ++ +I++V+ LTI + HL HL L
Sbjct: 206 MPKLREAYVD-----VESSNHLKTLIGSITSVKHLTICCL-EDYLYGDGFIFNHLEHLKL 259
Query: 85 SG-AYRNSHLTLLMLKNCPKLQSFKLCGSFGAKDVLTY--PQFVPECLTSCLSKCYLERY 141
+ +S+L +LK P LQ + D++ + P V ECL S L Y
Sbjct: 260 CMCPFDSSNLLGQLLKGSPNLQVLDI-FEMKRNDIVCWNQPSSVLECLLSSLKILNWSAY 318
Query: 142 QFTESDLKFAKYIMQNSTYLQVMK-IGDASPNQSEVLKEL--LALIPRKSASCELSF 195
D A YI++N+ +L+ + D N LK + L L PR S++C+L F
Sbjct: 319 FGRPQDRDIAVYILKNACHLKTATFLTDKRINDVRRLKMIKELRLSPRASSTCQLVF 375
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 78 HLRHLTLSGAYRNSHLTLLMLKNCPKLQSFKLCGSFGAKDVL-----TYPQFVPECLTSC 132
HL LTL Y +S+L + LKN P L+ L + L P VPEC+ S
Sbjct: 286 HLEELTLWNKY-SSNLLVWFLKNSPNLRELMLVSETDDHENLGMLSWNQPSIVPECMLSS 344
Query: 133 LSKCYLERYQFTESDLKFAKYIMQNSTYLQVMKIGDASP--NQSEVLKELLALIPRKSAS 190
L K +Y D A YI++N+ L+ I + + E++ E L L + S++
Sbjct: 345 LQKFTWFKYLGRPQDRDIAVYILKNACRLRTATIKSDTRLFTKLEMITE-LRLSSQASST 403
Query: 191 CELSF 195
CEL+F
Sbjct: 404 CELNF 408
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 78 HLRHLTLSGAYRNSHLTLLMLKNCPKLQSFKLCGSFGAKDVL-----TYPQFVPECLTSC 132
HL LTL Y +S+L + LKN P L+ L + L P VPEC+ S
Sbjct: 286 HLEELTLWNKY-SSNLLVWFLKNSPNLRELMLVSETDDHENLGMLSWNQPSIVPECMLSS 344
Query: 133 LSKCYLERYQFTESDLKFAKYIMQNSTYLQVMKIGDASP--NQSEVLKELLALIPRKSAS 190
L K +Y D A YI++N+ L+ I + + E++ E L L + S++
Sbjct: 345 LQKFTWFKYLGRPQDRDIAVYILKNACRLRTATIKSDTRLFTKLEMITE-LRLSSQASST 403
Query: 191 CELSF 195
CEL+F
Sbjct: 404 CELNF 408
>AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:11679230-11680679
FORWARD LENGTH=422
Length = 422
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 5 LKTRNLDYGTGSICEKRFKILPKLARADMDFSWLETEDGNNLKIILKAISNVEFLTIDLI 64
L+ +++ G G C + K+ +A++ S++ T+ ++ +IS+V+ L + +
Sbjct: 230 LECLDIEDGRGGFCVIENN-MTKVVKANVCNSYVHTQQ------LMGSISSVKRLYVCIP 282
Query: 65 GXXXXXXXXXXXXHLRHLTLSGAYRNSHLTLLM--LKNCPKLQSFKLCG-----SFGAKD 117
L LT+ L LLM L++ PKL+ KL S +
Sbjct: 283 SSKDAYPVGSVFHCLVRLTICTC-ETEWLNLLMCVLRDSPKLRELKLVKNHVYRSHQPRP 341
Query: 118 VLTYPQFVPECLTSCLSKCYLERYQFTESDLKFAKYIMQNSTYLQVMKIGDASPN---QS 174
P VPECL + L +Y+ TE + + A +I+++ + L+ + I S + +
Sbjct: 342 CWNEPSAVPECLLTSLETLEWVKYEGTEEEKEVAAFILRSGSCLKKVTISSKSTDINKKF 401
Query: 175 EVLKELLALIPRKSASCELSF 195
E+LKE L+L+ R+S +C+++F
Sbjct: 402 EMLKE-LSLLFRRSPTCQIAF 421
>AT5G56400.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr5:22846069-22847615 REVERSE LENGTH=455
Length = 455
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 4 DLKTRNLDYGTGSICEKRFKILPKLARADMDFSWLETEDGNNLKIILKAISNVEFLTIDL 63
+LK N+ +C F+ +P L A++D ++ TE+ +++++V+ L++ L
Sbjct: 257 NLKYLNIKDHYTDLCS--FEDMPYLDEANLDVAFTHTEN------FFESLTSVKKLSLCL 308
Query: 64 IGXXXXXXXXXXXXHLRHLTLSGAYRNSHLTLL--MLKNCPKLQSFKL-------CGSFG 114
L HL L + L +L +L + PKL+ KL +
Sbjct: 309 KKSNAQYPEGIIFSQLDHLELCTCDDSKWLNILAMLLPDSPKLRVLKLNDKNHDFVDKYC 368
Query: 115 AKDVLTYPQFVPECLTSCLSKCYLERYQFTESDLKFAKYIMQNSTYLQVMKIGDASPNQS 174
+ P +VPECLT L Y+ T + A YI++NST L+ I
Sbjct: 369 SCTWNQQPSYVPECLTKSLEIFEWRNYKATFRERDVAVYILKNSTCLKKTVISPKLKISG 428
Query: 175 E-----VLKELLALIPRKSASCELSF 195
E +++E LA + S+SCEL F
Sbjct: 429 EICDHHIIREDLASLFMGSSSCELKF 454
>AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13324130-13325559
FORWARD LENGTH=419
Length = 419
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 20 KRFKILPKLARADMDFSWLETEDGNNLKIILKAISNVEFLTIDLIGXXXXXXXXXXXXHL 79
++ + +P+L A +D + G K L+A+++V L++ L L
Sbjct: 238 RQIENMPELVEAHVDIT-----QGVTHKF-LRALTSVRQLSLCLSLSEVMCPSGIIFSQL 291
Query: 80 RHLTLSGAYRNS-HLTLLMLKNCPKLQSFKL------CGSFGAKDVLTY--PQFVPECLT 130
HL LS + L ML++ PKLQS KL G G + + + P VPECL
Sbjct: 292 VHLNLSTVVKGWWDLLTSMLQDSPKLQSLKLIDKQHESGLCGIETPIGWKLPSSVPECLL 351
Query: 131 SCLSKCYLERYQFTESDLKFAKYIMQNSTYLQVMKIGDASPNQSE---VLKELLALIPRK 187
L Y+ D + A Y+++N+ L+ K S + E +LKE LA +P
Sbjct: 352 FSLEAFEWIGYKGRRGDREVATYVLKNAACLRTAKFSPESTDVGEKYHMLKE-LASVPTA 410
Query: 188 SASCELSF 195
S S +L F
Sbjct: 411 STSSKLLF 418