Miyakogusa Predicted Gene
- Lj0g3v0119429.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0119429.1 Non Chatacterized Hit- tr|I1LZ60|I1LZ60_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,75.95,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; no description,Tetratricopeptide-like ,CUFF.7065.1
(633 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 406 e-113
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 395 e-110
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 1e-99
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 358 8e-99
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 1e-92
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 7e-92
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 1e-91
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 327 1e-89
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 325 8e-89
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 5e-87
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 317 1e-86
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 314 1e-85
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 1e-84
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 303 3e-82
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 299 3e-81
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 299 4e-81
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 6e-81
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 292 4e-79
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 7e-79
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 291 1e-78
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 290 2e-78
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 3e-78
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 289 3e-78
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 8e-78
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 287 2e-77
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 5e-77
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 9e-77
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 4e-76
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 283 4e-76
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 280 2e-75
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 5e-75
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 6e-75
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 8e-74
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 274 2e-73
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 8e-73
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 9e-73
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 1e-72
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 270 2e-72
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 268 7e-72
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 1e-71
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 267 2e-71
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 8e-71
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 8e-71
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 4e-70
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 4e-70
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 261 8e-70
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 261 1e-69
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 3e-69
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 6e-69
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 258 1e-68
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 2e-68
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 7e-68
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 254 2e-67
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 4e-67
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 251 8e-67
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 249 4e-66
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 7e-65
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 6e-64
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 242 7e-64
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 2e-63
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 240 2e-63
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 238 1e-62
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 232 5e-61
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 2e-60
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 3e-60
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 9e-60
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 6e-59
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 224 1e-58
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 5e-58
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 5e-57
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 2e-54
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 207 2e-53
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 3e-53
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 4e-52
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 6e-52
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 199 4e-51
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 6e-51
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 8e-51
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 191 2e-48
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 1e-46
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 9e-44
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 3e-43
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 91 3e-18
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 87 3e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 82 1e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 78 2e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 77 3e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 8e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 70 4e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 67 5e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 8e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 64 2e-10
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 64 2e-10
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 64 3e-10
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 64 3e-10
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 7e-10
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 62 2e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 7e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 59 7e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 56 6e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 53 7e-07
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 8e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 52 1e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/602 (37%), Positives = 344/602 (57%), Gaps = 12/602 (1%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFA-TNHRALRHSLRLFSLVTNPDL 77
L C+ + QIQA M++ GL D F S+ LI+F A + R L +S+++ + NP++
Sbjct: 59 LLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNI 118
Query: 78 FLWNAIIKAHSLS--PNHAFXXXXXXXXXXX-XXXXXXFTFPYLLKSCANARTPHLGLQL 134
F WN I+ S S P +F FT+P L K CA+ R LG +
Sbjct: 119 FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMI 178
Query: 135 HCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRA 194
H++K R V NA +H + D NA KVF++ PVRD VS+N +ING+ + G A
Sbjct: 179 LGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA 238
Query: 195 GCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN 254
++ V M G++PD+ T++ L+S+CS L D G++ + V +E G L LVN
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV-KENG-LRMTIPLVN 296
Query: 255 ALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV 314
AL+DM++KCG + A R+ + K + +WT+++S YA G ++V+R+LFD M E+DV
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLE--KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLK 374
V W AMI G A KPDE+ ++ LS C++LGAL++G IH +
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH-R 413
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
Y E + N ++VDMYAKCG+I AL VF + ++ Y +II GLA HG
Sbjct: 414 YI-EKYSLSLNVALGTSLVDMYAKCGNISEALSVF--HGIQTRNSLTYTAIIGGLALHGD 470
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
AI+ F EM G+ PD +TF+ LL AC H G++ G+ F M + + +NPQ++HY
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 530
Query: 495 CVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHD 554
+VDLLGR GLL EA L+ +MP +A+A +W ALL C++HG+VEL + A ++LL ++
Sbjct: 531 IMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPS 590
Query: 555 HGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPE 614
YV+L M + + ++A R+ ++ G++K PG S +E+NG + +F+ DKS PE
Sbjct: 591 DSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPE 650
Query: 615 AK 616
++
Sbjct: 651 SE 652
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/618 (34%), Positives = 348/618 (56%), Gaps = 11/618 (1%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFA-TNHRALRHSLRLFSLVTNPDL 77
L C +++Q Q HM+ TG D + ++ L + A ++ +L ++ ++F + P+
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 78 FLWNAIIKAHSLSPNHAFXXXXXXXXXXXXX-XXXXFTFPYLLKSCANARTPHLGLQLHC 136
F WN +I+A++ P+ +TFP+L+K+ A + LG LH
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC 196
VKS S VFVAN+L+H Y D +A KVF + +D VS+N MINGFV+ G
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 197 SMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNAL 256
++++ M ++ T+V +LSAC+ + + GRQV Y E + N L NA+
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV--CSYIEENRVNVNLTLANAM 273
Query: 257 VDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVS 316
+DMY KCG +E A+R+ + +V WT+++ YA D E AR + + M ++D+V+
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVT--WTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 317 WTAMISGYSHAGYXXXXXXXX-XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKY 375
W A+IS Y G MK +++ +V+ LS CA++GALELGR IH Y
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH-SY 390
Query: 376 AAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLG 435
++ N T A++ MY+KCG ++ + +VF S +K+ +++++I GLA HG G
Sbjct: 391 IKKH-GIRMNFHVTSALIHMYSKCGDLEKSREVF--NSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 436 KYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGC 495
A+ +F +M+ + P+GVTF + CAC H+GLVDE + F M + YG+ P+ +HY C
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 496 VVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDH 555
+VD+LGR G L +A I MP + +W ALL ACK+H ++ LA++AC LL +E +
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 567
Query: 556 GARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEA 615
+V+LSN+ A + + + + +RK + G++K PG S +E++G +H+FL+GD +HP +
Sbjct: 568 DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMS 627
Query: 616 KATELMLRDINMGVKSIG 633
+ L ++ +KS G
Sbjct: 628 EKVYGKLHEVMEKLKSNG 645
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/622 (33%), Positives = 344/622 (55%), Gaps = 13/622 (2%)
Query: 7 SSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRA-LRHS 65
S S Y R ++L C+T Q Q+ + + G+ + L F+ + + ++
Sbjct: 29 SISNDYSRFISILGV-CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYA 87
Query: 66 LRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCA-N 124
+LF + PD+ +WN +IK S TFP+LL +
Sbjct: 88 YKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRD 147
Query: 125 ARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMM 184
G +LHCH+VK S+++V NAL+ Y + A VF++ D S+N+M
Sbjct: 148 GGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM 207
Query: 185 INGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELG 244
I+G+ R S+++L +M + P TL+ +LSACS ++D+ + ++VH V
Sbjct: 208 ISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE--- 264
Query: 245 CLGDNAL-LVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVAR 303
C + +L L NALV+ YA CG +++A R+ ++ + V++ WTS+V Y RG++++AR
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK-ARDVIS-WTSIVKGYVERGNLKLAR 322
Query: 304 RLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG 363
FDQM RD +SWT MI GY AG M PDE +V+ L+ CA LG
Sbjct: 323 TYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 364 ALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYN 423
+LE+G I Y +N + A++DMY KCG + A VF D++ +
Sbjct: 383 SLEIGEWIK-TYIDKN-KIKNDVVVGNALIDMYFKCGCSEKAQKVF--HDMDQRDKFTWT 438
Query: 424 SIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTV 483
+++ GLA++G G+ AI +F +M+ + + PD +T++ +L AC HSG+VD+ +K F M +
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 484 YGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKL 543
+ + P + HYGC+VD+LGR GL+ EAY ++ MP N+++W ALL A ++H D +A+L
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAEL 558
Query: 544 ACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALH 603
A +++L +E D+GA Y +L N+ A + + VR+ I +V I+K PG+S +E+NG H
Sbjct: 559 AAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAH 618
Query: 604 KFLAGDKSHPEAKATELMLRDI 625
+F+AGDKSH +++ + L ++
Sbjct: 619 EFVAGDKSHLQSEEIYMKLEEL 640
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 216/635 (34%), Positives = 338/635 (53%), Gaps = 53/635 (8%)
Query: 5 LASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALIS---FFATNHRA 61
+ S+++ ++K L++ +C T+ QI ++ LHHD FL L+ FF R
Sbjct: 6 VPSATSKVQQIKTLISVAC-TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFF----RQ 60
Query: 62 LRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXX--FTFPYLL 119
++S LFS P++FL+N++I NH F FTFP +L
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLING--FVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVL 118
Query: 120 KSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCV 179
K+C A + LG+ LH +VK F+ V +LL Y ++A+K+F+++P R V
Sbjct: 119 KACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV 178
Query: 180 SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLV 239
++ + +G+ +GR ++ + M G++PD Y +V +LSAC + D G + +
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI--VK 236
Query: 240 YRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDV 299
Y E + N+ + LV++YAKC G +
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKC---------------------------------GKM 263
Query: 300 EVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSEC 359
E AR +FD M E+D+V+W+ MI GY+ + +KPD+ +V LS C
Sbjct: 264 EKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSC 323
Query: 360 ARLGALELGRR-IHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT 418
A LGAL+LG I L E N A++DMYAKCG++ +VF K K+K
Sbjct: 324 ASLGALDLGEWGISLIDRHEFL---TNLFMANALIDMYAKCGAMARGFEVF-KEMKEKDI 379
Query: 419 TILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFE 478
I+ N+ ISGLA +G K + +F + LG+ PDG TF+ LLC C H+GL+ +G + F
Sbjct: 380 VIM-NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 479 SMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDV 538
++S VY + +EHYGC+VDL GR G+L +AY LI +MP + NA++W ALLS C++ D
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDT 498
Query: 539 ELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEM 598
+LA+ +EL+A+E + YV LSN+ + + DEAA VR ++ G++K PG+S++E+
Sbjct: 499 QLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIEL 558
Query: 599 NGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
G +H+FLA DKSHP + L D+ ++ +G
Sbjct: 559 EGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 358 bits (918), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 208/665 (31%), Positives = 341/665 (51%), Gaps = 74/665 (11%)
Query: 6 ASSSASYDRVKA----LLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISF--FATNH 59
+SS YD ++ L +C+T+Q I A M+ GLH+ + + LI F + +
Sbjct: 22 SSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHF 81
Query: 60 RALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLL 119
L +++ +F + P+L +WN + + H+LS + +TFP++L
Sbjct: 82 EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141
Query: 120 KSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCV---FRDAH------------ 164
KSCA ++ G Q+H H++K ++V +L+ Y DAH
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 201
Query: 165 ----------------NAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
NA K+F+++PV+D VS+N MI+G+ G ++++ DM
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 261
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
+RPDE T+VT++SAC+ +GRQVH ++ + G N +VNAL+D+Y+KCG
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVH--LWIDDHGFGSNLKIVNALIDLYSKCG---- 315
Query: 269 AERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG 328
++E A LF+++ +DV+SW +I GY+H
Sbjct: 316 -----------------------------ELETACGLFERLPYKDVISWNTLIGGYTHMN 346
Query: 329 YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGF 388
P++V +++ L CA LGA+++GR IH+
Sbjct: 347 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 406
Query: 389 TCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLL 448
+++DMYAKCG I+ A VF S K+ +N++I G A HG + LF MR +
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVF--NSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 449 GLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSE 508
G+ PD +TFV LL AC HSG++D G+ F +M+ Y + P++EHYGC++DLLG GL E
Sbjct: 465 GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKE 524
Query: 509 AYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLAD 568
A +I M + + VIW +LL ACK+HG+VEL + + L+ +E ++ YV+LSN+ A
Sbjct: 525 AEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYAS 584
Query: 569 MDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMG 628
+ +E A R +++ G++K PG S +E++ +H+F+ GDK HP + ML ++ +
Sbjct: 585 AGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 644
Query: 629 VKSIG 633
++ G
Sbjct: 645 LEKAG 649
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 207/606 (34%), Positives = 314/606 (51%), Gaps = 56/606 (9%)
Query: 23 CRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNA 82
C + Q Q+ A ++ LH DL ++ LIS + R ++R+F+ V P++ L N+
Sbjct: 29 CANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLC-RQTNLAVRVFNQVQEPNVHLCNS 87
Query: 83 IIKAHSLS--PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVK 140
+I+AH+ + P AF FT+P+LLK+C+ + +H H+ K
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADN--FTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 141 SRFHSHVFVANALLHFY--CVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
S ++V NAL+ Y C +A K+FE+M RD VS+N M+ G V+AG
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAG------ 199
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
L D R R + R+L + N ++D
Sbjct: 200 --------------------------ELRDAR--RLFDEMPQRDL-------ISWNTMLD 224
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG--ERDVVS 316
YA+C + A + + +V +W+++V Y+ GD+E+AR +FD+M ++VV+
Sbjct: 225 GYARCREMSKAFELFEKMPERNTV--SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVT 282
Query: 317 WTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYA 376
WT +I+GY+ G +K D V++ L+ C G L LG RIH
Sbjct: 283 WTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 377 AENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGK 436
N G N A++DMYAKCG++ A DVF K K + +N+++ GL HG GK
Sbjct: 343 RSN--LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK--KDLVSWNTMLHGLGVHGHGK 398
Query: 437 YAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCV 496
AI LF MR G+ PD VTF+A+LC+C H+GL+DEG F SM VY + PQ+EHYGC+
Sbjct: 399 EAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCL 458
Query: 497 VDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHG 556
VDLLGR G L EA ++ MP + N VIW ALL AC++H +V++AK L+ ++
Sbjct: 459 VDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDP 518
Query: 557 ARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAK 616
Y +LSN+ A + + A +R + ++G++KP G S VE+ +H+F DKSHP++
Sbjct: 519 GNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSD 578
Query: 617 ATELML 622
ML
Sbjct: 579 QIYQML 584
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 181/419 (43%), Gaps = 50/419 (11%)
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
L CAN QLH +++ H + +A L+ + R + A +VF Q+ +
Sbjct: 26 LPKCANLNQVK---QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
N +I + + + V +M+ FG+ D +T LL ACS V + +H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 239 VYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGD 298
+ +LG L + + NAL+D Y++CG L + + + + + +W S++ G+
Sbjct: 143 I-EKLG-LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 299 VEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSE 358
+ ARRLFD+M +RD++SW M+ GY+
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYAR-------------------------------- 228
Query: 359 CARLG-ALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKK 417
C + A EL ++ + +W +V Y+K G ++ A +F K K
Sbjct: 229 CREMSKAFELFEKMPERNTV-SW---------STMVMGYSKAGDMEMARVMFDKMPLPAK 278
Query: 418 TTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPF 477
+ + II+G A GL K A L ++M GL D +++L AC SGL+ G +
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMR-I 337
Query: 478 ESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
S+ + ++D+ + G L +A+ + ++P K + V W +L VHG
Sbjct: 338 HSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHG 395
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 188/516 (36%), Positives = 294/516 (56%), Gaps = 13/516 (2%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
++F +L +C+ + G+Q+H + KS F S V++ +AL+ Y + ++A +VF++
Sbjct: 153 YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
M R+ VS+N +I F + G A ++ V M + PDE TL +++SAC+SL +VG
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG 272
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSG--VRNGKSVVAAWTSLV 290
++VHG V + L ++ +L NA VDMYAKC ++ A + +RN V A TS++
Sbjct: 273 QEVHGRVVKN-DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN----VIAETSMI 327
Query: 291 SAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEV 350
S YA + AR +F +M ER+VVSW A+I+GY+ G + P
Sbjct: 328 SGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHY 387
Query: 351 DVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFT-CAVVDMYAKCGSIDTAL 406
L CA L L LG + H LK+ + ++ F +++DMY KCG ++
Sbjct: 388 SFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447
Query: 407 DVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGH 466
VF K + + + +N++I G A +G G A+ LF EM G PD +T + +L ACGH
Sbjct: 448 LVFRKMME--RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGH 505
Query: 467 SGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWR 526
+G V+EG+ F SM+ +GV P +HY C+VDLLGR G L EA +I MP + ++VIW
Sbjct: 506 AGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG 565
Query: 527 ALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVG 586
+LL+ACKVH ++ L K ++LL VE + YV+LSNM A++ + ++ +VRK++ G
Sbjct: 566 SLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEG 625
Query: 587 IQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELML 622
+ K PG S++++ G H F+ DKSHP K +L
Sbjct: 626 VTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLL 661
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 198/484 (40%), Gaps = 109/484 (22%)
Query: 115 FPYLLKSCANARTPHLGLQ-LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
F LL SC ++ + ++ +H ++KS F + +F+ N L+ Y + +VF++M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 174 PVR-------------------------------DCVSYNMMINGFVRAGRAGCSMKVLG 202
P R D ++N M++GF + R ++
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 203 DMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAK 262
M G +EY+ ++LSACS L D G QVH L+ + + + +ALVDMY+K
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK--SPFLSDVYIGSALVDMYSK 199
Query: 263 CGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMIS 322
CG + A+RV + G V +W SL++ + G A +F M E V
Sbjct: 200 CGNVNDAQRVFDEM--GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV-------- 249
Query: 323 GYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHC 382
+PDEV + + +S CA L A+++G+ +H + +N
Sbjct: 250 -----------------------EPDEVTLASVISACASLSAIKVGQEVHGR-VVKNDKL 285
Query: 383 GQNGGFTCAVVDMYAKCGSIDTALDVFCK-----------------------------TS 413
+ + A VDMYAKC I A +F T
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACG-----HSG 468
++ + +N++I+G +G + A++LF ++ + P +F +L AC H G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 469 L---VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIW 525
+ V K F+ S G + ++D+ + G + E Y L+ + + V W
Sbjct: 406 MQAHVHVLKHGFKFQS---GEEDDIFVGNSLIDMYVKCGCVEEGY-LVFRKMMERDCVSW 461
Query: 526 RALL 529
A++
Sbjct: 462 NAMI 465
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 151/350 (43%), Gaps = 19/350 (5%)
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSAC--SSLEDQRVGRQVHGLVYRELGCLGDNALLVNA 255
+K+ D+ F D LL +C S L V R VH V + + + N
Sbjct: 7 LKLAADLSSF---TDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIK--SGFSNEIFIQNR 60
Query: 256 LVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD 313
L+D Y+KCG LE +V + RN + W S+V+ G ++ A LF M ERD
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRN----IYTWNSVVTGLTKLGFLDEADSLFRSMPERD 116
Query: 314 VVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHL 373
+W +M+SG++ +E + LS C+ L + G ++H
Sbjct: 117 QCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHS 176
Query: 374 KYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG 433
A + G A+VDMY+KCG+++ A VF + + + +NS+I+ +G
Sbjct: 177 LIAKSPFLSDVYIG--SALVDMYSKCGNVNDAQRVFDEMG--DRNVVSWNSLITCFEQNG 232
Query: 434 LGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHY 493
A+ +F+ M + PD VT +++ AC + G++ + + +
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 494 GCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKL 543
VD+ + + EA + +MP + N + +++S + + A+L
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISGYAMAASTKAARL 341
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 218/633 (34%), Positives = 338/633 (53%), Gaps = 26/633 (4%)
Query: 6 ASSSASYDRVKAL--------LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFAT 57
S + +D V++L L +C + Q Q+ A ++ L D F + LI F A
Sbjct: 19 GSKTTKWDPVQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAI 78
Query: 58 NH-RALRHSLRLF-SLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTF 115
+ L + LF + NP++F++N +I A S S N F TF
Sbjct: 79 TYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRHRVSPDRQ--TF 136
Query: 116 PYLLKSCANARTPHLGLQLHCHLVKSRFHS-HVFVANALLHFYCVFRDAHNAYKVFEQMP 174
YL+K+ + Q+HCH++ S S ++ N+L+ FY + A KVF +MP
Sbjct: 137 LYLMKASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQ 234
D S+N+MI G+ + G + ++K+ M GI PDEYT+++LL C L D R+G+
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKG 253
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
VHG + R N +L NAL+DMY KC LA+R ++ K + +W ++V +
Sbjct: 254 VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMK--KKDMRSWNTMVVGFV 311
Query: 295 SRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG--YXXXXXXXXXXXXXXXMKPDEVDV 352
GD+E A+ +FDQM +RD+VSW +++ GYS G +KPD V +
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
V+ +S A G L GR +H + + A++DMY KCG I+ A VF KT
Sbjct: 372 VSLISGAANNGELSHGRWVH--GLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF-KT 428
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
+ +K L+ S+I+GLA HG G+ A+ LF M+ G+ P+ VT +A+L AC HSGLV+E
Sbjct: 429 ATEKDVA-LWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEE 487
Query: 473 GKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLIL-NMPFKANAVIWRALLSA 531
G F M +G +P+ EHYG +VDLL R G + EA ++ MP + + +W ++LSA
Sbjct: 488 GLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
Query: 532 CKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPP 591
C+ D+E A+LA ELL +E + YV+LSN+ A + + + R+A++N G++K
Sbjct: 548 CRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTA 607
Query: 592 GWSYVEMNGALHKFLAGDK-SHPEAKATELMLR 623
G+S V LH+F+A +K +HP + +L+
Sbjct: 608 GYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQ 640
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 197/537 (36%), Positives = 292/537 (54%), Gaps = 29/537 (5%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHN-----AYKVFEQ 172
L N RT Q+H +KS A +L F C D H+ A+K+F Q
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRF-CATSDLHHRDLDYAHKIFNQ 84
Query: 173 MPVRDCVSYNMMINGFVRAG--RAGCSMKVLGDMRGFG-IRPDEYTLVTLLSACSSLEDQ 229
MP R+C S+N +I GF + +A ++ + +M + P+ +T ++L AC+
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 230 RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAER------------VVSGVR 277
+ G+Q+HGL + G GD ++ N LV MY CG ++ A V++ R
Sbjct: 145 QEGKQIHGLALK-YGFGGDEFVMSN-LVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 278 NGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXX 337
+ W ++ Y GD + AR LFD+M +R VVSW MISGYS G+
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 338 XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYA 397
++P+ V +V+ L +RLG+LELG +HL AE+ + A++DMY+
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHL--YAEDSGIRIDDVLGSALIDMYS 320
Query: 398 KCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTF 457
KCG I+ A+ VF + ++ I ++++I+G A HG AI F +MR G+ P V +
Sbjct: 321 KCGIIEKAIHVFERLPRE--NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAY 378
Query: 458 VALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP 517
+ LL AC H GLV+EG++ F M +V G+ P++EHYGC+VDLLGR GLL EA ILNMP
Sbjct: 379 INLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Query: 518 FKANAVIWRALLSACKVHGDVELAKLACQELL-AVEHDHGARYVMLSNMLADMDQHDEAA 576
K + VIW+ALL AC++ G+VE+ K L+ V HD GA YV LSNM A E +
Sbjct: 439 IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGA-YVALSNMYASQGNWSEVS 497
Query: 577 SVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+R + I+K PG S ++++G LH+F+ D SHP+AK ML +I+ ++ G
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 202/495 (40%), Gaps = 97/495 (19%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATN---HRALRHSLRLFSLVTNPDL 77
++CRTI+ QI A + +G D + ++ F AT+ HR L ++ ++F+ + +
Sbjct: 31 NNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNC 90
Query: 78 FLWNAIIKAHSLSPNHAFXXXXX---XXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQL 134
F WN II+ S S FTFP +LK+CA G Q+
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 135 HCHLVKSRFHSHVFVANALLHFY--CVFR------------------------------- 161
H +K F FV + L+ Y C F
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 162 ------------DAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGI 209
D A +F++M R VS+N MI+G+ G +++V +M+ I
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 210 RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELA 269
RP+ TLV++L A S L +G +H +Y E + + +L +AL+DMY+KCG +E A
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLH--LYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328
Query: 270 ERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY 329
V F+++ +V++W+AMI+G++ G
Sbjct: 329 IHV---------------------------------FERLPRENVITWSAMINGFAIHGQ 355
Query: 330 XXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT 389
++P +V + L+ C+ G +E GRR + + + + +
Sbjct: 356 AGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYG 415
Query: 390 CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG---LGKYAITLFEEMR 446
C +VD+ + G +D A + F K +++ +++ G +GK +
Sbjct: 416 C-MVDLLGRSGLLDEA-EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANI----- 468
Query: 447 LLGLVP-DGVTFVAL 460
L+ +VP D +VAL
Sbjct: 469 LMDMVPHDSGAYVAL 483
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 23/273 (8%)
Query: 68 LFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANART 127
LF + + WN +I +SL+ T +L + + +
Sbjct: 230 LFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGS 289
Query: 128 PHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMING 187
LG LH + S + +AL+ Y A VFE++P + ++++ MING
Sbjct: 290 LELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMING 349
Query: 188 FVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQ-------VHGLVY 240
F G+AG ++ MR G+RP + + LL+ACS GR+ V GL
Sbjct: 350 FAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEP 409
Query: 241 R--ELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGD 298
R GC +VD+ + G L+ AE + + V W +L+ A +G+
Sbjct: 410 RIEHYGC----------MVDLLGRSGLLDEAEEFILNMPIKPDDV-IWKALLGACRMQGN 458
Query: 299 VEVARRLFD---QMGERDVVSWTAMISGYSHAG 328
VE+ +R+ + M D ++ A+ + Y+ G
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQG 491
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 201/623 (32%), Positives = 316/623 (50%), Gaps = 43/623 (6%)
Query: 13 DRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLV 72
D A L S Q QI A ++V GL FL T LI +++ + + ++F +
Sbjct: 21 DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHA-SSSFGDITFARQVFDDL 79
Query: 73 TNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGL 132
P +F WNAII+ +S + + FTFP+LLK+C+ +G
Sbjct: 80 PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR 139
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPV--RDCVSYNMMINGFVR 190
+H + + F + VFV N L+ Y R +A VFE +P+ R VS+ +++ + +
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 199
Query: 191 AGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNA 250
G ++++ MR ++PD LV++L+A + L+D + GR +H V + +G +
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK-MGLEIEPD 258
Query: 251 LLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG 310
LL+ +L MYAKCG V A+ LFD+M
Sbjct: 259 LLI-SLNTMYAKCG---------------------------------QVATAKILFDKMK 284
Query: 311 ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR 370
+++ W AMISGY+ GY ++PD + + +A+S CA++G+LE R
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 371 IHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLA 430
++ ++ + + A++DM+AKCGS++ A VF +T + ++++++I G
Sbjct: 345 MYEYVGRSDYR--DDVFISSALIDMFAKCGSVEGARLVFDRTLD--RDVVVWSAMIVGYG 400
Query: 431 HHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQM 490
HG + AI+L+ M G+ P+ VTF+ LL AC HSG+V EG F M+ + +NPQ
Sbjct: 401 LHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQ 459
Query: 491 EHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLA 550
+HY CV+DLLGR G L +AY +I MP + +W ALLSACK H VEL + A Q+L +
Sbjct: 460 QHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFS 519
Query: 551 VEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDK 610
++ + YV LSN+ A D A VR + G+ K G S+VE+ G L F GDK
Sbjct: 520 IDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDK 579
Query: 611 SHPEAKATELMLRDINMGVKSIG 633
SHP + E + I +K G
Sbjct: 580 SHPRYEEIERQVEWIESRLKEGG 602
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 319 bits (817), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 200/639 (31%), Positives = 327/639 (51%), Gaps = 29/639 (4%)
Query: 4 PLASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALR 63
P+AS++A+ K S C+++ Q+ AH++ T ++H L S +++ L
Sbjct: 6 PIASTAANTILEKL---SFCKSLNHIKQLHAHILRTVINHKLN-SFLFNLSVSSSSINLS 61
Query: 64 HSLRLFSLVTNP-DLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSC 122
++L +FS + +P + ++N ++ S S F+F +LK+
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 123 ANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYN 182
+ G++LH K FV + Y + A VF++M RD V++N
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 183 MMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRE 242
MI + R G + K+ +M+ + PDE L ++SAC + R R ++ + E
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI-E 240
Query: 243 LGCLGDNALLVNALVDMYAKCGCLELAERVVS--GVRNGKSVVAAWTSLVSAYASRGDVE 300
D LL ALV MYA GC+++A VRN + T++VS Y+ G ++
Sbjct: 241 NDVRMDTHLLT-ALVTMYAGAGCMDMAREFFRKMSVRN----LFVSTAMVSGYSKCGRLD 295
Query: 301 VARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECA 360
A+ +FDQ ++D+V WT MIS Y + Y +KPD V + + +S CA
Sbjct: 296 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 355
Query: 361 RLGALELGRRIHLKYAAENWHCGQNGGFTC------AVVDMYAKCGSIDTALDVFCKTSK 414
LG L+ + +H C G A+++MYAKCG +D DVF K +
Sbjct: 356 NLGILDKAKWVH--------SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 415 DKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
+ + ++S+I+ L+ HG A++LF M+ + P+ VTFV +L C HSGLV+EGK
Sbjct: 408 --RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGK 465
Query: 475 KPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKV 534
K F SM+ Y + P++EHYGC+VDL GR LL EA +I +MP +N VIW +L+SAC++
Sbjct: 466 KIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRI 525
Query: 535 HGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWS 594
HG++EL K A + +L +E DH V++SN+ A + ++ ++R+ ++ + K G S
Sbjct: 526 HGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
Query: 595 YVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
++ NG H+FL GDK H ++ L ++ +K G
Sbjct: 586 RIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAG 624
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 311/559 (55%), Gaps = 15/559 (2%)
Query: 70 SLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPH 129
SL+ P L ++N ++K+ + + FT P +LKS R
Sbjct: 4 SLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVI 63
Query: 130 LGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFV 189
G ++H + VK+ +V+N+L+ Y +KVF++MP RD VS+N +I+ +V
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 190 RAGRAGCSMKVLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGD 248
GR ++ V M + ++ DE T+V+ LSACS+L++ +G +++ V E
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--- 180
Query: 249 NALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQ 308
+ + NALVDM+ KCGCL+ A V +R+ V WTS+V Y S G ++ AR LF++
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDKN--VKCWTSMVFGYVSTGRIDEARVLFER 238
Query: 309 MGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
+DVV WTAM++GY ++PD +V+ L+ CA+ GALE G
Sbjct: 239 SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298
Query: 369 RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISG 428
+ IH Y EN + A+VDMYAKCG I+TAL+VF + + + T + S+I G
Sbjct: 299 KWIH-GYINEN-RVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE--RDTASWTSLIYG 354
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNP 488
LA +G+ A+ L+ EM +G+ D +TFVA+L AC H G V EG+K F SM+ + V P
Sbjct: 355 LAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQP 414
Query: 489 QMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAV---IWRALLSACKVHGDVELAKLAC 545
+ EH C++DLL R GLL EA LI M +++ ++ +LLSA + +G+V++A+
Sbjct: 415 KSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVA 474
Query: 546 QELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKF 605
++L VE + + +L+++ A ++ ++ +VR+ + ++GI+K PG S +E++G H+F
Sbjct: 475 EKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEF 534
Query: 606 LAGDK--SHPEAKATELML 622
+ GD SHP+ ML
Sbjct: 535 IVGDDLLSHPKMDEINSML 553
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 272/495 (54%), Gaps = 13/495 (2%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHN----AYKVFEQMPVRDCVSYNMMINGF 188
Q+H ++K+ + L F C+ + + A VF+ D +N+MI GF
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSF-CISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 189 VRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGD 248
+ S+ + M + YT +LL ACS+L Q+H + + LG D
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITK-LGYEND 149
Query: 249 NALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQ 308
VN+L++ YA G +LA + + V +W S++ Y G +++A LF +
Sbjct: 150 -VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV--SWNSVIKGYVKAGKMDIALTLFRK 206
Query: 309 MGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
M E++ +SWT MISGY A ++PD V + ALS CA+LGALE G
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 369 RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISG 428
+ IH Y + + C ++DMYAKCG ++ AL+VF + KK+ + ++ISG
Sbjct: 267 KWIH-SYLNKT-RIRMDSVLGCVLIDMYAKCGEMEEALEVF--KNIKKKSVQAWTALISG 322
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNP 488
A+HG G+ AI+ F EM+ +G+ P+ +TF A+L AC ++GLV+EGK F SM Y + P
Sbjct: 323 YAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP 382
Query: 489 QMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQEL 548
+EHYGC+VDLLGR GLL EA I MP K NAVIW ALL AC++H ++EL + + L
Sbjct: 383 TIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 442
Query: 549 LAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAG 608
+A++ HG RYV +N+ A + D+AA R+ + G+ K PG S + + G H+FLAG
Sbjct: 443 IAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAG 502
Query: 609 DKSHPEAKATELMLR 623
D+SHPE + + R
Sbjct: 503 DRSHPEIEKIQSKWR 517
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 159/343 (46%), Gaps = 41/343 (11%)
Query: 23 CRTIQQALQIQAHMVVTGLHHDLFLSTALISF--FATNHRALRHSLRLFSLVTNPDLFLW 80
C ++ QI A M+ TGL D + T +SF +T+ L ++ +F PD FLW
Sbjct: 24 CSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLW 83
Query: 81 NAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVK 140
N +I+ S S +TFP LLK+C+N Q+H + K
Sbjct: 84 NLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITK 143
Query: 141 SRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC---- 196
+ + V+ N+L++ Y V + A+ +F+++P D VS+N +I G+V+AG+
Sbjct: 144 LGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTL 203
Query: 197 ---------------------------SMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQ 229
++++ +M+ + PD +L LSAC+ L
Sbjct: 204 FRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 263
Query: 230 RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSL 289
G+ +H Y + +++L L+DMYAKCG +E A V ++ K V AWT+L
Sbjct: 264 EQGKWIHS--YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK--KKSVQAWTAL 319
Query: 290 VSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAG 328
+S YA G A F +M + +V+++TA+++ S+ G
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 310/642 (48%), Gaps = 82/642 (12%)
Query: 37 VVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS-LSPNHAF 95
+VTG ++F+ AL++ + + R+L + ++F ++ D+ WN+II++++ L
Sbjct: 154 LVTGFISNVFVGNALVAMY-SRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212
Query: 96 XXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLH 155
T +L CA+ T LG QLHC V S ++FV N L+
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272
Query: 156 FYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGR---------------------- 193
Y A VF M V+D VS+N M+ G+ + GR
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 194 -----AGCSMKVLG--------DMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVY 240
+G + + LG M GI+P+E TL+++LS C+S+ G+++H
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 241 RELGCL-----GDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYAS 295
+ L GD +++N L+DMYAKC
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCK------------------------------- 421
Query: 296 RGDVEVARRLFDQMG--ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXX--XMKPDEVD 351
V+ AR +FD + ERDVV+WT MI GYS G +P+
Sbjct: 422 --KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 352 VVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK 411
+ AL CA L AL +G++IH YA N + ++DMYAKCGSI A VF
Sbjct: 480 ISCALVACASLAALRIGKQIH-AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVF-- 536
Query: 412 TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVD 471
+ K + + S+++G HG G+ A+ +F+EMR +G DGVT + +L AC HSG++D
Sbjct: 537 DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMID 596
Query: 472 EGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA 531
+G + F M TV+GV+P EHY C+VDLLGR G L+ A LI MP + V+W A LS
Sbjct: 597 QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 532 CKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPP 591
C++HG VEL + A +++ + +H Y +LSN+ A+ + + +R + + G++K P
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716
Query: 592 GWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
G S+VE F GDK+HP AK +L D +K IG
Sbjct: 717 GCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIG 758
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 263/553 (47%), Gaps = 33/553 (5%)
Query: 9 SASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRL 68
S S + C+TI Q I ++ G+ L L++ LIS + + L H++ L
Sbjct: 24 STSAPEITPPFIHKCKTISQVKLIHQKLLSFGIL-TLNLTSHLISTYISVG-CLSHAVSL 81
Query: 69 FSLVTNPD--LFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANAR 126
D ++ WN++I+++ + +TFP++ K+C
Sbjct: 82 LRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEIS 141
Query: 127 TPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMIN 186
+ G H + + F S+VFV NAL+ Y R +A KVF++M V D VS+N +I
Sbjct: 142 SVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201
Query: 187 GFVRAGRAGCSMKVLGDMRG-FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGC 245
+ + G+ ++++ M FG RPD TLV +L C+SL +G+Q+H +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH--CFAVTSE 259
Query: 246 LGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRL 305
+ N + N LVDMYAKCG ++ A V S + + K VV +W ++V+ Y+ G E A RL
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNM-SVKDVV-SWNAMVAGYSQIGRFEDAVRL 317
Query: 306 FDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECAR 361
F++M E DVV+W+A ISGY+ G +KP+EV +++ LS CA
Sbjct: 318 FEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377
Query: 362 LGALELGRRIH---LKYAAE---NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD 415
+GAL G+ IH +KY + N H G ++DMYAKC +DTA +F S
Sbjct: 378 VGALMHGKEIHCYAIKYPIDLRKNGH-GDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 416 KKTTILYNSIISGLAHHGLGKYAITLFEEM--RLLGLVPDGVTFVALLCACGHSGLVDEG 473
++ + + +I G + HG A+ L EM P+ T L AC + G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 474 KKPFESMSTVYGVNPQMEHY-----GCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRAL 528
K+ Y + Q C++D+ + G +S+A + NM K N V W +L
Sbjct: 497 KQIH-----AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK-NEVTWTSL 550
Query: 529 LSACKVHGDVELA 541
++ +HG E A
Sbjct: 551 MTGYGMHGYGEEA 563
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/611 (31%), Positives = 301/611 (49%), Gaps = 51/611 (8%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLW 80
SS R++ Q+ ++ +G + +L++F+ N R + + ++F +T D+ W
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR-VDSARKVFDEMTERDVISW 264
Query: 81 NAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVK 140
N+II + + T + CA++R LG +H VK
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK 324
Query: 141 SRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKV 200
+ F N LL Y D +A VF +M R VSY MI G+ R G AG ++K+
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 201 LGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMY 260
+M GI PD YT+ +L+ C+ G++VH + LG + + NAL+DMY
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE--NDLGFDIFVSNALMDMY 442
Query: 261 AKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAM 320
AKCG ++ AE V F +M +D++SW +
Sbjct: 443 AKCGSMQEAELV---------------------------------FSEMRVKDIISWNTI 469
Query: 321 ISGYSHAGYXXXXXXX-XXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
I GYS Y PDE V L CA L A + GR IH
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH------- 522
Query: 380 WHCGQNGGFT-----CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
+ +NG F+ ++VDMYAKCG++ A +F + K + + +I+G HG
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS--KDLVSWTVMIAGYGMHGF 580
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
GK AI LF +MR G+ D ++FV+LL AC HSGLVDEG + F M + P +EHY
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 495 CVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHD 554
C+VD+L R G L +AY I NMP +A IW ALL C++H DV+LA+ +++ +E +
Sbjct: 641 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 700
Query: 555 HGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPE 614
+ YV+++N+ A+ ++ ++ +RK I G++K PG S++E+ G ++ F+AGD S+PE
Sbjct: 701 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760
Query: 615 AKATELMLRDI 625
+ E LR +
Sbjct: 761 TENIEAFLRKV 771
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 236/522 (45%), Gaps = 49/522 (9%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLF 78
L + ++++ ++ + G D L + L S TN L+ + R+F V
Sbjct: 103 LCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKL-SLMYTNCGDLKEASRVFDEVKIEKAL 161
Query: 79 LWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
WN ++ + S + + +TF + KS ++ R+ H G QLH +
Sbjct: 162 FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
+KS F V N+L+ FY + +A KVF++M RD +S+N +ING+V G A +
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
V M GI D T+V++ + C+ +GR VH + + C N L+D
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK--ACFSREDRFCNTLLD 339
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWT 318
MY+KCG L+ A+ V + + +SVV ++TS+++ YA G A +LF++M E +
Sbjct: 340 MYSKCGDLDSAKAVFREMSD-RSVV-SYTSMIAGYAREGLAGEAVKLFEEMEEEGI---- 393
Query: 319 AMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
PD V A L+ CAR L+ G+R+H ++ E
Sbjct: 394 ---------------------------SPDVYTVTAVLNCCARYRLLDEGKRVH-EWIKE 425
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
N G + + A++DMYAKCGS+ A VF + K I +N+II G + + A
Sbjct: 426 N-DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR--VKDIISWNTIIGGYSKNCYANEA 482
Query: 439 ITLF----EEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
++LF EE R PD T +L AC D+G++ G
Sbjct: 483 LSLFNLLLEEKR---FSPDERTVACVLPACASLSAFDKGRE-IHGYIMRNGYFSDRHVAN 538
Query: 495 CVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
+VD+ + G L A+ L ++ K + V W +++ +HG
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/541 (35%), Positives = 292/541 (53%), Gaps = 52/541 (9%)
Query: 116 PYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHF--YCVFRDAHNAYKVFEQM 173
P L ++C N RT Q+H +V + S++ V L++ V A+K+F+++
Sbjct: 16 PKLWQNCKNIRTLK---QIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEI 72
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
P D N ++ G ++ + ++ + +M G+ PD YT +L ACS LE + G
Sbjct: 73 PKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGF 132
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
HG V R L N + NAL+ +A CG L +A + + K+ AW+S+ S Y
Sbjct: 133 AFHGKVVRHGFVL--NEYVKNALILFHANCGDLGIASELFDD--SAKAHKVAWSSMTSGY 188
Query: 294 ASRGDVEVARRLFDQM-------------------------------GERDVVSWTAMIS 322
A RG ++ A RLFD+M E+DVV+W AMIS
Sbjct: 189 AKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMIS 248
Query: 323 GYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAEN 379
GY + GY PD V +++ LS CA LG LE G+R+H L+ A+ +
Sbjct: 249 GYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVS 308
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLA-HHGLGKYA 438
A++DMYAKCGSID A++VF + KD+ + +N++I GLA HH G +
Sbjct: 309 SSIYVGTPIWNALIDMYAKCGSIDRAIEVF-RGVKDRDLST-WNTLIVGLALHHAEG--S 364
Query: 439 ITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVD 498
I +FEEM+ L + P+ VTF+ ++ AC HSG VDEG+K F M +Y + P ++HYGC+VD
Sbjct: 365 IEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVD 424
Query: 499 LLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGAR 558
+LGR G L EA+ + +M + NA++WR LL ACK++G+VEL K A ++LL++ D
Sbjct: 425 MLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGD 484
Query: 559 YVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGA--LHKFLAGDKSHPEAK 616
YV+LSN+ A Q D VRK D+ ++KP G S +E + + ++L S PE++
Sbjct: 485 YVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLS--SEPESR 542
Query: 617 A 617
+
Sbjct: 543 S 543
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 211/512 (41%), Gaps = 111/512 (21%)
Query: 7 SSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALI-SFFATNHRALRHS 65
++ + +R + L +C+ I+ QI A MVV GL +L + LI S + AL+++
Sbjct: 6 TNDRTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYA 65
Query: 66 LRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANA 125
+LF + PD+ + N +++ + S +TF ++LK+C+
Sbjct: 66 HKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKL 125
Query: 126 RTPHLGLQLHCHLVKSRFHSHVFVANALLHFYC----------VFRDAHNAYKV------ 169
G H +V+ F + +V NAL+ F+ +F D+ A+KV
Sbjct: 126 EWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMT 185
Query: 170 ---------------FEQMPV-------------------------------RDCVSYNM 183
F++MP +D V++N
Sbjct: 186 SGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNA 245
Query: 184 MINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYREL 243
MI+G+V G ++ + +MR G PD T+++LLSAC+ L D G+++H +
Sbjct: 246 MISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETA 305
Query: 244 GCLGD---NALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA---SRG 297
+ NAL+DMYAKCG ++ A V GV++ ++ W +L+ A + G
Sbjct: 306 SVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRD--LSTWNTLIVGLALHHAEG 363
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS 357
+E +F++M V W P+EV + +
Sbjct: 364 SIE----MFEEMQRLKV--W-----------------------------PNEVTFIGVIL 388
Query: 358 ECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKK 417
C+ G ++ GR+ + + ++ N +VDM + G ++ A +F ++ K +
Sbjct: 389 ACSHSGRVDEGRK-YFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAF-MFVESMKIEP 446
Query: 418 TTILYNSIISGLAHHG---LGKYAITLFEEMR 446
I++ +++ +G LGKYA MR
Sbjct: 447 NAIVWRTLLGACKIYGNVELGKYANEKLLSMR 478
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 280/507 (55%), Gaps = 17/507 (3%)
Query: 132 LQLHCHLVKSRF--HSHVFVANALLH-FYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGF 188
LQ+H +++ H V N LH Y ++ +F Q D + IN
Sbjct: 46 LQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTA 105
Query: 189 VRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGD 248
G + + + I P+E+T +LL +CS+ + G+ +H V + G LG
Sbjct: 106 SINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLK-FG-LGI 159
Query: 249 NALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQ 308
+ + LVD+YAK G + A++V R + + + T++++ YA +G+VE AR LFD
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFD--RMPERSLVSSTAMITCYAKQGNVEAARALFDS 217
Query: 309 MGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXX-XMKPDEVDVVAALSECARLGALEL 367
M ERD+VSW MI GY+ G+ KPDE+ VVAALS C+++GALE
Sbjct: 218 MCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALET 277
Query: 368 GRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIIS 427
GR IH+ + N ++DMY+KCGS++ A+ VF T + K + +N++I+
Sbjct: 278 GRWIHVFVKSSRIRL--NVKVCTGLIDMYSKCGSLEEAVLVFNDTPR--KDIVAWNAMIA 333
Query: 428 GLAHHGLGKYAITLFEEMR-LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGV 486
G A HG + A+ LF EM+ + GL P +TF+ L AC H+GLV+EG + FESM YG+
Sbjct: 334 GYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGI 393
Query: 487 NPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQ 546
P++EHYGC+V LLGR G L AY I NM A++V+W ++L +CK+HGD L K +
Sbjct: 394 KPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAE 453
Query: 547 ELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFL 606
L+ + + YV+LSN+ A + ++ A VR + GI K PG S +E+ +H+F
Sbjct: 454 YLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFR 513
Query: 607 AGDKSHPEAKATELMLRDINMGVKSIG 633
AGD+ H ++K MLR I+ +KS G
Sbjct: 514 AGDREHSKSKEIYTMLRKISERIKSHG 540
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 190/461 (41%), Gaps = 85/461 (18%)
Query: 17 ALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRA------LRHSLRLFS 70
A+L +++ + LQI A + L H+L L HRA +RHSL LF
Sbjct: 33 AVLIDKSQSVDEVLQIHAAI----LRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFH 88
Query: 71 LVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHL 130
+PDLFL+ A I S++ FTF LLKSC+
Sbjct: 89 QTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS---- 144
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP---------------- 174
G +H H++K +VA L+ Y D +A KVF++MP
Sbjct: 145 GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAK 204
Query: 175 ---------------VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVT 218
RD VS+N+MI+G+ + G ++ + + G +PDE T+V
Sbjct: 205 QGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVA 264
Query: 219 LLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRN 278
LSACS + GR +H V+ + + N + L+DMY+KCG LE E V+
Sbjct: 265 ALSACSQIGALETGRWIH--VFVKSSRIRLNVKVCTGLIDMYSKCGSLE--EAVLVFNDT 320
Query: 279 GKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXX 338
+ + AW ++++ YA G + A RLF++M I+G
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEM---------QGITG--------------- 356
Query: 339 XXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAK 398
++P ++ + L CA G + G RI E + + C +V + +
Sbjct: 357 ------LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC-LVSLLGR 409
Query: 399 CGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG---LGK 436
G + A + + D ++L++S++ HG LGK
Sbjct: 410 AGQLKRAYETIKNMNMDAD-SVLWSSVLGSCKLHGDFVLGK 449
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/572 (32%), Positives = 287/572 (50%), Gaps = 42/572 (7%)
Query: 44 DLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS--LSPNHAFXXXXXX 101
DLFLS L+ T R++ RL + + LW+++I S ++ N
Sbjct: 35 DLFLSR-LLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYR 93
Query: 102 XXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFR 161
TFP LLK+ R + Q H H+VK S FV N+L+ Y
Sbjct: 94 HMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSG 152
Query: 162 DAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLS 221
A ++F+ +D V++ MI+GFVR G A +M +M+ G+ +E T+V++L
Sbjct: 153 LFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLK 212
Query: 222 ACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKS 281
A +ED R GR VHGL Y E G + + + ++LVDMY KC C + A++V
Sbjct: 213 AAGKVEDVRFGRSVHGL-YLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKV--------- 262
Query: 282 VVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXX 341
FD+M R+VV+WTA+I+GY +
Sbjct: 263 ------------------------FDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 342 XXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGS 401
+ P+E + + LS CA +GAL GRR+H + G T ++D+Y KCG
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTT--LIDLYVKCGC 356
Query: 402 IDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL 461
++ A+ VF + + K + ++I+G A HG + A LF M + P+ VTF+A+L
Sbjct: 357 LEEAILVFERLHE--KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVL 414
Query: 462 CACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKAN 521
AC H GLV+EG++ F SM + + P+ +HY C+VDL GR GLL EA LI MP +
Sbjct: 415 SACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPT 474
Query: 522 AVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKA 581
V+W AL +C +H D EL K A ++ ++ H RY +L+N+ ++ DE A VRK
Sbjct: 475 NVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQ 534
Query: 582 IDNVGIQKPPGWSYVEMNGALHKFLAGDKSHP 613
+ + + K PG+S++E+ G L +F+A D P
Sbjct: 535 MKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKP 566
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 190/427 (44%), Gaps = 47/427 (11%)
Query: 30 LQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSL 89
Q AH+V GL D F+ +LIS ++++ + RLF + D+ W A+I
Sbjct: 123 FQFHAHIVKFGLDSDPFVRNSLISGYSSSG-LFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 90 SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLH-CHLVKSRFHSHVF 148
+ + + T +LK+ G +H +L R VF
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
+ ++L+ Y +A KVF++MP R+ V++ +I G+V++ M V +M
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
+ P+E TL ++LSAC+ + GR+VH Y + N L+D+Y KCGCLE
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVH--CYMIKNSIEINTTAGTTLIDLYVKCGCLE- 358
Query: 269 AERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG 328
E ++ R + V WT++++ +A+ G AR FD + M+S +
Sbjct: 359 -EAILVFERLHEKNVYTWTAMINGFAAHG---YARDAFDL--------FYTMLSSH---- 402
Query: 329 YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGF 388
+ P+EV +A LS CA G +E GRR+ L + +
Sbjct: 403 ----------------VSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 389 TCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSII-SGLAH--HGLGKYAITLFEEM 445
C +VD++ + G ++ A + + + T +++ ++ S L H + LGKYA +
Sbjct: 447 AC-MVDLFGRKGLLEEAKALIERMPME-PTNVVWGALFGSCLLHKDYELGKYAAS----- 499
Query: 446 RLLGLVP 452
R++ L P
Sbjct: 500 RVIKLQP 506
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 191/618 (30%), Positives = 309/618 (50%), Gaps = 54/618 (8%)
Query: 22 SCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWN 81
+CRT+ +I + G D++++ +LI + + ++A+ ++ LF + D+ WN
Sbjct: 162 ACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLY-SRYKAVGNARILFDEMPVRDMGSWN 220
Query: 82 AIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKS 141
A+I + S N T LL +C A + G+ +H + +K
Sbjct: 221 AMISGYCQSGN----AKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKH 276
Query: 142 RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVL 201
S +FV+N L+ Y F + KVF++M VRD +S+N +I + + ++ +
Sbjct: 277 GLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLF 336
Query: 202 GDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYA 261
+MR I+PD TL++L S S L D R R V G R+ G ++ + NA+V MYA
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK-GWFLEDITIGNAVVVMYA 395
Query: 262 KCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMI 321
K G V+ AR +F+ + DV+SW +I
Sbjct: 396 KLGL---------------------------------VDSARAVFNWLPNTDVISWNTII 422
Query: 322 SGYSHAGYXXXXXXXXXXXXXX-XMKPDEVDVVAALSECARLGALELGRRIHLKYAAENW 380
SGY+ G+ + ++ V+ L C++ GAL G ++H +
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL---- 478
Query: 381 HCGQNGGF-----TCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLG 435
+NG + ++ DMY KCG ++ AL +F + + ++ +N++I+ HG G
Sbjct: 479 ---KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR--VNSVPWNTLIACHGFHGHG 533
Query: 436 KYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGC 495
+ A+ LF+EM G+ PD +TFV LL AC HSGLVDEG+ FE M T YG+ P ++HYGC
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 496 VVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDH 555
+VD+ GR G L A I +M + +A IW ALLSAC+VHG+V+L K+A + L VE +H
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 653
Query: 556 GARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEA 615
+V+LSNM A + + +R G++K PGWS +E++ + F G+++HP
Sbjct: 654 VGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMY 713
Query: 616 KATELMLRDINMGVKSIG 633
+ L + +K IG
Sbjct: 714 EEMYRELTALQAKLKMIG 731
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 149/564 (26%), Positives = 250/564 (44%), Gaps = 57/564 (10%)
Query: 6 ASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFAT--NHRALR 63
+ S D V L C +Q A + A +VV+ ++ +S L++ + N R
Sbjct: 48 GNESKEIDDVHTLF-RYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALAR 106
Query: 64 HSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXF-TFPYLLKSC 122
H+ F + N D++ WN +I + + N + + TFP +LK+C
Sbjct: 107 HT---FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
Query: 123 ANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYN 182
RT G ++HC +K F V+VA +L+H Y ++ NA +F++MPVRD S+N
Sbjct: 164 ---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWN 220
Query: 183 MMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRE 242
MI+G+ ++G A ++ + +R D T+V+LLSAC+ D G +H Y
Sbjct: 221 AMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHS--YSI 274
Query: 243 LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVA 302
L + N L+D+YA+ G L ++V
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKV------------------------------ 304
Query: 303 RRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARL 362
FD+M RD++SW ++I Y ++PD + +++ S ++L
Sbjct: 305 ---FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 363 GALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILY 422
G + R + + W ++ AVV MYAK G +D+A VF I +
Sbjct: 362 GDIRACRSVQGFTLRKGWFL-EDITIGNAVVVMYAKLGLVDSARAVF--NWLPNTDVISW 418
Query: 423 NSIISGLAHHGLGKYAITLFEEMRLLG-LVPDGVTFVALLCACGHSGLVDEGKKPFESMS 481
N+IISG A +G AI ++ M G + + T+V++L AC +G + +G K
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK-LHGRL 477
Query: 482 TVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA 541
G+ + + D+ G+ G L +A L +P + N+V W L++ HG E A
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKA 536
Query: 542 KLACQELL--AVEHDHGARYVMLS 563
+ +E+L V+ DH +LS
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLS 560
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/615 (30%), Positives = 310/615 (50%), Gaps = 17/615 (2%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
R +QI +V G DLF+ +L+ F+A L + ++F ++ ++ W ++
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE-LDSARKVFDEMSERNVVSWTSM 206
Query: 84 IKAHSLSPNHAFXXXXX----XXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
I ++ F T ++ +CA G +++ +
Sbjct: 207 ICGYA---RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMK 199
S + + +AL+ Y A ++F++ + N M + +VR G ++
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 200 VLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDM 259
V M G+RPD ++++ +S+CS L + G+ HG V R DN + NAL+DM
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNALIDM 381
Query: 260 YAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTA 319
Y KC + A R+ + N V W S+V+ Y G+V+ A F+ M E+++VSW
Sbjct: 382 YMKCHRQDTAFRIFDRMSN--KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 320 MISGYSHAG-YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
+ISG + + D V +++ S C LGAL+L + I+ Y E
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY--YYIE 497
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
+ +VDM+++CG ++A+ +F S + + + I +A G + A
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIF--NSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 439 ITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVD 498
I LF++M GL PDGV FV L AC H GLV +GK+ F SM ++GV+P+ HYGC+VD
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 499 LLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGAR 558
LLGR GLL EA LI +MP + N VIW +LL+AC+V G+VE+A A +++ + +
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 559 YVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKAT 618
YV+LSN+ A + ++ A VR ++ G++KPPG S +++ G H+F +GD+SHPE
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Query: 619 ELMLRDINMGVKSIG 633
E ML +++ +G
Sbjct: 736 EAMLDEVSQRASHLG 750
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 229/522 (43%), Gaps = 82/522 (15%)
Query: 22 SCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLV-TNPD---- 76
+C+TI + + GL +D+ T L++ + R SL V N +
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVA--RSCELGTRESLSFAKEVFENSESYGT 98
Query: 77 LFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHC 136
F++N++I+ ++ S +TFP+ L +CA +R G+Q+H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC 196
+VK + +FV N+L+HFY + +A KVF++M R+ VS+ MI G+ R A
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 197 SMKVLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNA 255
++ + M R + P+ T+V ++SAC+ LED G +V+ + R G + N L+V+A
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSG-IEVNDLMVSA 276
Query: 256 LVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVV 315
LVDMY KC ++VA+RLFD+ G ++
Sbjct: 277 LVDMYMKCNA---------------------------------IDVAKRLFDEYGASNLD 303
Query: 316 SWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH--- 372
AM S Y G ++PD + +++A+S C++L + G+ H
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Query: 373 LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD----------------- 415
L+ E+W A++DMY KC DTA +F + S
Sbjct: 364 LRNGFESWD-----NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 416 ------------KKTTILYNSIISGLAHHGLGKYAITLFEEMRLL-GLVPDGVTFVALLC 462
+K + +N+IISGL L + AI +F M+ G+ DGVT +++
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 463 ACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGG 504
ACGH G +D K + + G+ + +VD+ R G
Sbjct: 479 ACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCG 519
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 309/612 (50%), Gaps = 11/612 (1%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
R +QI +V G DLF+ +L+ F+A L + ++F ++ ++ W ++
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE-LDSARKVFDEMSERNVVSWTSM 206
Query: 84 IKAHSLSP-NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSR 142
I ++ T ++ +CA G +++ + S
Sbjct: 207 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 266
Query: 143 FHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLG 202
+ + +AL+ Y A ++F++ + N M + +VR G ++ V
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 203 DMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAK 262
M G+RPD ++++ +S+CS L + G+ HG V R DN + NAL+DMY K
Sbjct: 327 LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNALIDMYMK 384
Query: 263 CGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMIS 322
C + A R+ + N V W S+V+ Y G+V+ A F+ M E+++VSW +IS
Sbjct: 385 CHRQDTAFRIFDRMSN--KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 323 GYSHAG-YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWH 381
G + + D V +++ S C LGAL+L + I+ Y E
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY--YYIEKNG 500
Query: 382 CGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITL 441
+ +VDM+++CG ++A+ +F S + + + I +A G + AI L
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIF--NSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 442 FEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLG 501
F++M GL PDGV FV L AC H GLV +GK+ F SM ++GV+P+ HYGC+VDLLG
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618
Query: 502 RGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVM 561
R GLL EA LI +MP + N VIW +LL+AC+V G+VE+A A +++ + + YV+
Sbjct: 619 RAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVL 678
Query: 562 LSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELM 621
LSN+ A + ++ A VR ++ G++KPPG S +++ G H+F +GD+SHPE E M
Sbjct: 679 LSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAM 738
Query: 622 LRDINMGVKSIG 633
L +++ +G
Sbjct: 739 LDEVSQRASHLG 750
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 229/522 (43%), Gaps = 82/522 (15%)
Query: 22 SCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLV-----TNPD 76
+C+TI + + GL +D+ T L++ + R SL V +
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVA--RSCELGTRESLSFAKEVFENSESYGT 98
Query: 77 LFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHC 136
F++N++I+ ++ S +TFP+ L +CA +R G+Q+H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC 196
+VK + +FV N+L+HFY + +A KVF++M R+ VS+ MI G+ R A
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 197 SMKVLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNA 255
++ + M R + P+ T+V ++SAC+ LED G +V+ + R G + N L+V+A
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSG-IEVNDLMVSA 276
Query: 256 LVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVV 315
LVDMY KC ++VA+RLFD+ G ++
Sbjct: 277 LVDMYMKCNA---------------------------------IDVAKRLFDEYGASNLD 303
Query: 316 SWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH--- 372
AM S Y G ++PD + +++A+S C++L + G+ H
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Query: 373 LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD----------------- 415
L+ E+W N A++DMY KC DTA +F + S
Sbjct: 364 LRNGFESWDNICN-----ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 416 ------------KKTTILYNSIISGLAHHGLGKYAITLFEEMRLL-GLVPDGVTFVALLC 462
+K + +N+IISGL L + AI +F M+ G+ DGVT +++
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 463 ACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGG 504
ACGH G +D K + + G+ + +VD+ R G
Sbjct: 479 ACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCG 519
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 292/526 (55%), Gaps = 18/526 (3%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHS--HVFVANALLHFYCVFRDAHNAYKVFEQMPV 175
LL+ CA+ G +LH L S +++NAL FY + A K+F+++P+
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 176 --RDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
+D V + +++ F R G SMK+ +MR + D+ ++V L C+ LED +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
Q HG+ + +G L + + NAL+DMY KCG + +R+ + KSVV+ WT ++
Sbjct: 132 QGHGVAVK-MGVL-TSVKVCNALMDMYGKCGLVSEVKRIFEELEE-KSVVS-WTVVLDTV 187
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKP-DEVDV 352
+E R +F +M ER+ V+WT M++GY AG+ + V +
Sbjct: 188 VKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT-----CAVVDMYAKCGSIDTALD 407
+ LS CA+ G L +GR +H+ + G+ + A+VDMYAKCG+ID++++
Sbjct: 248 CSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN 307
Query: 408 VFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHS 467
VF K+ + +N++ SGLA HG G+ I +F +M + + PD +TF A+L AC HS
Sbjct: 308 VF--RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHS 364
Query: 468 GLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRA 527
G+VDEG + F S+ YG+ P+++HY C+VDLLGR GL+ EA L+ MP N V+ +
Sbjct: 365 GIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGS 423
Query: 528 LLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGI 587
LL +C VHG VE+A+ +EL+ + + +++SNM + D A +R ++ GI
Sbjct: 424 LLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGI 483
Query: 588 QKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+K PG S + +N ++H+F +GD+SHP K L L ++ ++S G
Sbjct: 484 RKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAG 529
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 289/599 (48%), Gaps = 40/599 (6%)
Query: 28 QALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH 87
Q Q+ +++ +G +L S LI + L + ++F + ++ W+A++ H
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLM-AYKVFDSMPERNVVSWSALMSGH 82
Query: 88 SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
L+ + FTF LK+C GLQ+H +K F V
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
V N+L+ Y + A KVF ++ R +S+N MI GFV AG ++ G M+
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 208 GI--RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC 265
I RPDE+TL +LL ACSS G+Q+HG + R +A + +LVD+Y KCG
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 266 LELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYS 325
L AR+ FDQ+ E+ ++SW+++I GY+
Sbjct: 263 LF---------------------------------SARKAFDQIKEKTMISWSSLILGYA 289
Query: 326 HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQN 385
G + D + + + A L G++ ++ A G
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ--MQALAVKLPSGLE 347
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM 445
+VVDMY KCG +D A F + K I + +I+G HGLGK ++ +F EM
Sbjct: 348 TSVLNSVVDMYLKCGLVDEAEKCFAEMQL--KDVISWTVVITGYGKHGLGKKSVRIFYEM 405
Query: 446 RLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGL 505
+ PD V ++A+L AC HSG++ EG++ F + +G+ P++EHY CVVDLLGR G
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 465
Query: 506 LSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNM 565
L EA HLI MP K N IW+ LLS C+VHGD+EL K + LL ++ + A YVM+SN+
Sbjct: 466 LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNL 525
Query: 566 LADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRD 624
+E + R+ + G++K G S+VE+ +H F +G+ SHP + L++
Sbjct: 526 YGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKE 584
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 197/423 (46%), Gaps = 45/423 (10%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD 177
+L+ C G Q+HC+L+KS ++ +N L+ YC R+ AYKVF+ MP R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
VS++ +++G V G S+ + +M GI P+E+T T L AC L G Q+HG
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 238 LVYRELGCLGDNALLV--NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYAS 295
+ +G ++ N+LVDMY+KCG + AE+V
Sbjct: 132 FCLK----IGFEMMVEVGNSLVDMYSKCGRINEAEKVF---------------------- 165
Query: 296 RGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK--PDEVDVV 353
RR+ D R ++SW AMI+G+ HAGY +K PDE +
Sbjct: 166 -------RRIVD----RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 214
Query: 354 AALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTS 413
+ L C+ G + G++IH +HC + T ++VD+Y KCG + +A F +
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
+KT I ++S+I G A G A+ LF+ ++ L D +++ L+ +G
Sbjct: 275 --EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
K+ ++++ + VVD+ + GL+ EA M K + + W +++
Sbjct: 333 KQ-MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYG 390
Query: 534 VHG 536
HG
Sbjct: 391 KHG 393
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/366 (19%), Positives = 144/366 (39%), Gaps = 19/366 (5%)
Query: 21 SSCRTIQQALQIQAHMVVTGLH--HDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLF 78
SS I QI +V +G H ++ +L+ + L + + F + +
Sbjct: 221 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG-YLFSARKAFDQIKEKTMI 279
Query: 79 LWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
W+++I ++ F ++ A+ G Q+
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
VK V N+++ Y A K F +M ++D +S+ ++I G+ + G S+
Sbjct: 340 VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 399
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
++ +M I PDE + +LSACS + G ++ + G + +VD
Sbjct: 400 RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG-IKPRVEHYACVVD 458
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVAR---RLFDQMGERDVV 315
+ + G L+ A+ ++ + K V W +L+S GD+E+ + ++ ++ ++
Sbjct: 459 LLGRAGRLKEAKHLIDTMPI-KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPA 517
Query: 316 SWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKY 375
++ M + Y AGY E+ + L + A + +E+ R +H
Sbjct: 518 NYVMMSNLYGQAGYWNEQG-----------NARELGNIKGLKKEAGMSWVEIEREVHFFR 566
Query: 376 AAENWH 381
+ E+ H
Sbjct: 567 SGEDSH 572
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 265/519 (51%), Gaps = 41/519 (7%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
F+FP++LKSCA+ P G QLHCH+ K + FV AL+ YC +A KVFE+
Sbjct: 54 FSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEE 113
Query: 173 MPVRDCVS--YNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQR 230
P +S YN +I+G+ + + + M+ G+ D T++ L+ C+ E
Sbjct: 114 NPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLW 173
Query: 231 VGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLV 290
+GR +HG + G L ++N+ + MY KC
Sbjct: 174 LGRSLHGQCVK--GGLDSEVAVLNSFITMYMKC--------------------------- 204
Query: 291 SAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEV 350
G VE RRLFD+M + +++W A+ISGYS G + PD
Sbjct: 205 ------GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC 410
+V+ LS CA LGA ++G + K N N + A + MYA+CG++ A VF
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVG-KLVESNGFV-PNVFVSNASISMYARCGNLAKARAVF- 315
Query: 411 KTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLV 470
K+ + + ++I HG+G+ + LF++M G+ PDG FV +L AC HSGL
Sbjct: 316 -DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 471 DEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLS 530
D+G + F +M Y + P EHY C+VDLLGR G L EA I +MP + + +W ALL
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
Query: 531 ACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKP 590
ACK+H +V++A+LA +++ E ++ YV++SN+ +D + +R + +K
Sbjct: 435 ACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKK 494
Query: 591 PGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGV 629
PG+SYVE G +H FLAGD+SH + + ML ++ V
Sbjct: 495 PGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSV 533
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 165/389 (42%), Gaps = 59/389 (15%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDL----FLWNAIIKA 86
Q+ H+ G + F+ TALIS + + + ++F NP +NA+I
Sbjct: 74 QLHCHVTKGGCETEPFVLTALISMYCKCG-LVADARKVFE--ENPQSSQLSVCYNALISG 130
Query: 87 HSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSH 146
++ + T L+ C LG LH VK S
Sbjct: 131 YTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE 190
Query: 147 VFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
V V N+ + Y ++F++MPV+ +++N +I+G+ + G A +++ M+
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCL 266
G+ PD +TLV++LS+C+ L +++G +V LV E N + NA + MYA+CG L
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLV--ESNGFVPNVFVSNASISMYARCGNL 308
Query: 267 ELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSH 326
A R V + KS+V +WT+++ Y G E+ LFD M +R +
Sbjct: 309 AKA-RAVFDIMPVKSLV-SWTAMIGCYGMHGMGEIGLMLFDDMIKRGI------------ 354
Query: 327 AGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG----ALELGRRIHLKY----AAE 378
+PD V LS C+ G LEL R + +Y E
Sbjct: 355 -------------------RPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALD 407
++ C +VD+ + G +D A++
Sbjct: 396 HYSC---------LVDLLGRAGRLDEAME 415
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 156/365 (42%), Gaps = 58/365 (15%)
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
G PD ++ +L +C+SL G+Q+H V + GC + ++ AL+ MY KCG +
Sbjct: 48 GSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKG-GCETE-PFVLTALISMYCKCGLVA 105
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
A +V + + +L+S Y + V A +F +M E V
Sbjct: 106 DARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGV------------- 152
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQ--N 385
D V ++ + C L LGR +H GQ
Sbjct: 153 ------------------SVDSVTMLGLVPLCTVPEYLWLGRSLH----------GQCVK 184
Query: 386 GGFTCAV------VDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAI 439
GG V + MY KCGS++ +F K I +N++ISG + +GL +
Sbjct: 185 GGLDSEVAVLNSFITMYMKCGSVEAGRRLF--DEMPVKGLITWNAVISGYSQNGLAYDVL 242
Query: 440 TLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDL 499
L+E+M+ G+ PD T V++L +C H G G + + + + G P + + +
Sbjct: 243 ELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVES-NGFVPNVFVSNASISM 301
Query: 500 LGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELL--AVEHDHGA 557
R G L++A + MP K+ V W A++ +HG E+ + +++ + D GA
Sbjct: 302 YARCGNLAKARAVFDIMPVKS-LVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPD-GA 359
Query: 558 RYVML 562
+VM+
Sbjct: 360 VFVMV 364
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/473 (35%), Positives = 266/473 (56%), Gaps = 17/473 (3%)
Query: 166 AYKVFEQMPVRDCVSYNMMINGFV---RAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA 222
AY VF P + +N MI ++ V + +PD +T +L
Sbjct: 66 AYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKI 125
Query: 223 CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV 282
+ D GRQ+HG V + + +V L+ MY CG L A ++ +
Sbjct: 126 AVRVSDVWFGRQIHGQVV--VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKD-- 181
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMG--ERDVVSWTAMISGYSHAGYXXXXXXXXXXX 340
V W +L++ Y G+++ AR L + M R+ VSWT +ISGY+ +G
Sbjct: 182 VNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
Query: 341 XXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC--AVVDMYAK 398
++PDEV ++A LS CA LG+LELG RI Y H G N + AV+DMYAK
Sbjct: 242 LMENVEPDEVTLLAVLSACADLGSLELGERI-CSYVD---HRGMNRAVSLNNAVIDMYAK 297
Query: 399 CGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFV 458
G+I ALDVF +++ + + +II+GLA HG G A+ +F M G+ P+ VTF+
Sbjct: 298 SGNITKALDVF--ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFI 355
Query: 459 ALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPF 518
A+L AC H G VD GK+ F SM + YG++P +EHYGC++DLLGR G L EA +I +MPF
Sbjct: 356 AILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPF 415
Query: 519 KANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASV 578
KANA IW +LL+A VH D+EL + A EL+ +E ++ Y++L+N+ +++ + DE+ +
Sbjct: 416 KANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMM 475
Query: 579 RKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKS 631
R + +G++K G S +E+ ++KF++GD +HP+ + +L+++++ ++S
Sbjct: 476 RNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQS 528
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 195/452 (43%), Gaps = 78/452 (17%)
Query: 20 ASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFL 79
++ +T++Q+ +M++TGL+ D L+ A +N LR++ +F+ P+ +L
Sbjct: 25 GNNLKTLKQS---HCYMIITGLNRD-NLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYL 80
Query: 80 WNAIIKAHSL--SPN-HAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHC 136
N +I+A SL PN H+ FTFP++LK G Q+H
Sbjct: 81 HNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHG 140
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC------------------ 178
+V F S V V L+ Y +A K+F++M V+D
Sbjct: 141 QVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDE 200
Query: 179 ---------------VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSAC 223
VS+ +I+G+ ++GRA +++V M + PDE TL+ +LSAC
Sbjct: 201 ARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSAC 260
Query: 224 SSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVV 283
+ L +G ++ Y + + L NA++DMYAK G + A V V N ++VV
Sbjct: 261 ADLGSLELGERI--CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV-NERNVV 317
Query: 284 AAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXX 343
WT++++ A+ G A +F++M + V
Sbjct: 318 -TWTTIIAGLATHGHGAEALAMFNRMVKAGV----------------------------- 347
Query: 344 XMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSID 403
+P++V +A LS C+ +G ++LG+R+ + N ++D+ + G +
Sbjct: 348 --RPNDVTFIAILSACSHVGWVDLGKRL-FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLR 404
Query: 404 TALDVFCKTSKDKKTTILYNSIISGL-AHHGL 434
A D K+ K ++ S+++ HH L
Sbjct: 405 EA-DEVIKSMPFKANAAIWGSLLAASNVHHDL 435
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSR-FHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
T +L +CA+ + LG ++ C V R + V + NA++ Y + A VFE
Sbjct: 252 TLLAVLSACADLGSLELGERI-CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFEC 310
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
+ R+ V++ +I G G ++ + M G+RP++ T + +LSACS + +G
Sbjct: 311 VNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLG 370
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
+++ + + G + N ++D+ + G L A+ V+ + K+ A W SL++A
Sbjct: 371 KRLFNSMRSKYG-IHPNIEHYGCMIDLLGRAGKLREADEVIKSMP-FKANAAIWGSLLAA 428
Query: 293 YASRGDVEVARRLFDQM 309
D+E+ R ++
Sbjct: 429 SNVHHDLELGERALSEL 445
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 281/525 (53%), Gaps = 21/525 (4%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHN--------AYKV 169
LL+SC++ + +H L+++ S VFVA+ LL CV N AY +
Sbjct: 18 LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLAL-CVDDSTFNKPTNLLGYAYGI 73
Query: 170 FEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQ 229
F Q+ + +N++I F + M I PD T L+ A S +E
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 230 RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSL 289
VG Q H + R G ++ + N+LV MYA CG + A R+ + G V +WTS+
Sbjct: 134 LVGEQTHSQIVR-FG-FQNDVYVENSLVHMYANCGFIAAAGRIFGQM--GFRDVVSWTSM 189
Query: 290 VSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE 349
V+ Y G VE AR +FD+M R++ +W+ MI+GY+ + +E
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 350 VDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
+V+ +S CA LGALE G R + +Y ++ H N A+VDM+ +CG I+ A+ VF
Sbjct: 250 TVMVSVISSCAHLGALEFGERAY-EYVVKS-HMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+ ++ ++SII GLA HG A+ F +M LG +P VTF A+L AC H GL
Sbjct: 308 --EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
V++G + +E+M +G+ P++EHYGC+VD+LGR G L+EA + IL M K NA I ALL
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 530 SACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQK 589
ACK++ + E+A+ L+ V+ +H YV+LSN+ A Q D+ S+R + ++K
Sbjct: 426 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 590 PPGWSYVEMNGALHKFLAG-DKSHPEAKATELMLRDINMGVKSIG 633
PPGWS +E++G ++KF G D+ HPE +I ++ IG
Sbjct: 486 PPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIG 530
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 167/365 (45%), Gaps = 51/365 (13%)
Query: 8 SSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALI------SFFATNHRA 61
++ + K L SC + I ++ T L D+F+++ L+ S F
Sbjct: 7 NTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNL 66
Query: 62 LRHSLRLFSLVTNPDLFLWNAIIKAHSL--SPNHAFXXXXXXXXXXXXXXXXXFTFPYLL 119
L ++ +FS + NP+LF++N +I+ S P+ AF TFP+L+
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDN--ITFPFLI 124
Query: 120 KSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCV---------------FRD-- 162
K+ + +G Q H +V+ F + V+V N+L+H Y FRD
Sbjct: 125 KASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVV 184
Query: 163 --------------AHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
NA ++F++MP R+ ++++MING+ + ++ + M+ G
Sbjct: 185 SWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
+ +E +V+++S+C+ L G + + V + + N +L ALVDM+ +CG +E
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSH--MTVNLILGTALVDMFWRCGDIEK 302
Query: 269 AERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE-----RDVVSWTAMISG 323
A V G+ S+ +W+S++ A G A F QM RD V++TA++S
Sbjct: 303 AIHVFEGLPETDSL--SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRD-VTFTAVLSA 359
Query: 324 YSHAG 328
SH G
Sbjct: 360 CSHGG 364
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 279/506 (55%), Gaps = 24/506 (4%)
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRA 191
++ C L KSR + + N LL + + A + F+ M VRD VS+N +I G+ ++
Sbjct: 204 MEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 192 GRAGCSMKVLGDMRGFGIRP--DEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDN 249
G+ + ++ F P D +T ++S R++ + N
Sbjct: 264 GKIDEARQL------FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER------N 311
Query: 250 ALLVNALVDMYAKCGCLELAERV--VSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
+ NA++ Y + +E+A+ + V RN V+ W ++++ YA G + A+ LFD
Sbjct: 312 EVSWNAMLAGYVQGERMEMAKELFDVMPCRN----VSTWNTMITGYAQCGKISEAKNLFD 367
Query: 308 QMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALEL 367
+M +RD VSW AMI+GYS +G+ + + +ALS CA + ALEL
Sbjct: 368 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 368 GRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIIS 427
G+++H + + G G A++ MY KCGSI+ A D+F + + K + +N++I+
Sbjct: 428 GKQLHGRLVKGGYETGCFVG--NALLLMYCKCGSIEEANDLFKEMAG--KDIVSWNTMIA 483
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVN 487
G + HG G+ A+ FE M+ GL PD T VA+L AC H+GLVD+G++ F +M+ YGV
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 488 PQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQE 547
P +HY C+VDLLGR GLL +A++L+ NMPF+ +A IW LL A +VHG+ ELA+ A +
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603
Query: 548 LLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLA 607
+ A+E ++ YV+LSN+ A + + +R + + G++K PG+S++E+ H F
Sbjct: 604 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 663
Query: 608 GDKSHPEAKATELMLRDINMGVKSIG 633
GD+ HPE L ++++ +K G
Sbjct: 664 GDEFHPEKDEIFAFLEELDLRMKKAG 689
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 68 LFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANART 127
LF + D W A+I +S S + +F L +CA+
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 128 PHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMING 187
LG QLH LVK + + FV NALL YC A +F++M +D VS+N MI G
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 484
Query: 188 FVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLG 247
+ R G +++ M+ G++PD+ T+V +LSACS GRQ + ++ G +
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM- 543
Query: 248 DNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
N+ +VD+ + G LE A ++ + + A W +L+ A G+ E+A D
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNM-PFEPDAAIWGTLLGASRVHGNTELAETAAD 602
Query: 308 QM 309
++
Sbjct: 603 KI 604
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 169/423 (39%), Gaps = 89/423 (21%)
Query: 166 AYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRP--DEYTLVTLLSAC 223
A K+F++MP RD VS+N+MI G+VR G + ++ F I P D + T+LS
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAREL------FEIMPERDVCSWNTMLSG- 166
Query: 224 SSLEDQRVGRQVHGLVYRELGCLGD-----------NALLVNALVDMYAKC-----GCLE 267
Y + GC+ D N + NAL+ Y + C+
Sbjct: 167 ----------------YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACML 210
Query: 268 LAER----------VVSGVRNGKSVVAA--------------WTSLVSAYASRGDVEVAR 303
R ++ G K +V A W ++++ YA G ++ AR
Sbjct: 211 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 270
Query: 304 RLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG 363
+LFD+ +DV +WTAM+SGY D++ +S A L
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF----------DKMPERNEVSWNAMLA 320
Query: 364 ALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYN 423
G R+ + + +N ++ YA+CG I A ++F K K+ + +
Sbjct: 321 GYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP--KRDPVSWA 378
Query: 424 SIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTV 483
++I+G + G A+ LF +M G + +F + L C ++ GK+ +
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL--- 435
Query: 484 YGVNPQMEHYGCVVD-----LLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDV 538
V E GC V + + G + EA L M K + V W +++ HG
Sbjct: 436 --VKGGYET-GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFG 491
Query: 539 ELA 541
E+A
Sbjct: 492 EVA 494
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 147/359 (40%), Gaps = 44/359 (12%)
Query: 243 LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVA 302
L C + N + Y + G A RV + SV ++ ++S Y G+ E+A
Sbjct: 57 LKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV--SYNGMISGYLRNGEFELA 114
Query: 303 RRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVA---ALSEC 359
R+LFD+M ERD+VSW MI GY + P E DV + LS
Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVR------NRNLGKARELFEIMP-ERDVCSWNTMLSGY 167
Query: 360 ARLGALELGRRIHLKYAAEN---WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDK 416
A+ G ++ R + + +N W+ A++ Y + ++ A +F S++
Sbjct: 168 AQNGCVDDARSVFDRMPEKNDVSWN---------ALLSAYVQNSKMEEACMLF--KSREN 216
Query: 417 KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKP 476
+ +N ++ G A F+ M V D V++ ++ SG +DE ++
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 477 FESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
F+ S V V + +V + ++ EA L MP + N V W A+L+
Sbjct: 273 FDE-SPVQDVFT----WTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGE 326
Query: 537 DVELAKLACQELLAVEHDHGARYVMLSN-MLADMDQHDEAASVRKAIDNVGIQKPPGWS 594
+E+AK EL V R V N M+ Q + + + D + + P W+
Sbjct: 327 RMEMAK----ELFDV---MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 128/314 (40%), Gaps = 55/314 (17%)
Query: 254 NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD 313
N ++ Y + G ELA ++ + + + +W ++ Y ++ AR LF+ M ERD
Sbjct: 99 NGMISGYLRNGEFELARKLFDEM--PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD 156
Query: 314 VVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV-----VAALSECARLGALELG 368
V SW M+SGY+ G P++ DV ++A + +++ +
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRM------PEKNDVSWNALLSAYVQNSKMEEACML 210
Query: 369 RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISG 428
+ +A +W+C G + K I A F S + + + +N+II+G
Sbjct: 211 FKSRENWALVSWNCLLGG---------FVKKKKIVEARQFF--DSMNVRDVVSWNTIITG 259
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM-------- 480
A G A LF+E V D T+ A++ + +V+E ++ F+ M
Sbjct: 260 YAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSW 315
Query: 481 ----------------STVYGVNP--QMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANA 522
++ V P + + ++ + G +SEA +L MP K +
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDP 374
Query: 523 VIWRALLSACKVHG 536
V W A+++ G
Sbjct: 375 VSWAAMIAGYSQSG 388
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 185/593 (31%), Positives = 291/593 (49%), Gaps = 49/593 (8%)
Query: 18 LLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDL 77
L C ++ Q QIQA M++ + FL + N+ + LFS+ P+
Sbjct: 42 FLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSF-----LFSVTEEPNH 96
Query: 78 FLWNAIIKAHSLSPN-HAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHC 136
+ +N +I+ + + N H FT+ ++ +CA +G +H
Sbjct: 97 YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 156
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC 196
L K V + ++L+ Y A K+F+++ RD VS+N MI+G+ AG A
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKD 216
Query: 197 SMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNAL 256
+M + M G PDE TLV++L ACS L D R GR + + + +G + L + L
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK--KIGLSTFLGSKL 274
Query: 257 VDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVS 316
+ MY KCG D++ ARR+F+QM ++D V+
Sbjct: 275 ISMYGKCG---------------------------------DLDSARRVFNQMIKKDRVA 301
Query: 317 WTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYA 376
WTAMI+ YS G + PD + LS C +GALELG++I
Sbjct: 302 WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETH-- 359
Query: 377 AENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGK 436
A N +VDMY KCG ++ AL VF + T +N++I+ AH G K
Sbjct: 360 ASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT--WNAMITAYAHQGHAK 417
Query: 437 YAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCV 496
A+ LF+ M + P +TF+ +L AC H+GLV +G + F MS+++G+ P++EHY +
Sbjct: 418 EALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNI 474
Query: 497 VDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAV-EHDH 555
+DLL R G+L EA+ + P K + ++ A+L AC DV + + A + L+ + E +
Sbjct: 475 IDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKN 534
Query: 556 GARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAG 608
YV+ SN+LADM DE+A +R + + G+ K PG S++E+ G L +FLAG
Sbjct: 535 AGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 199/605 (32%), Positives = 298/605 (49%), Gaps = 70/605 (11%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISF------FATNHRALRHSLRLFSLV 72
L S C +++ QIQ ++ L D + +++F FA+ + HS+R S++
Sbjct: 12 LISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIR--SVL 69
Query: 73 TNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGL 132
++ F +N ++ ++++ FTFP + K+C G
Sbjct: 70 SS---FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG 192
Q+H + K F+ ++V N+L+HFY V ++ NA KVF +MPVRD VS+ +I GF R G
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 193 RAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALL 252
++ M + P+ T V +L + + +G+ +HGL+ + +
Sbjct: 187 LYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLET-- 241
Query: 253 VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER 312
NAL+DMY KC L A RV F ++ ++
Sbjct: 242 GNALIDMYVKCEQLSDAMRV---------------------------------FGELEKK 268
Query: 313 DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXX-MKPDEVDVVAALSECARLGALELGRRI 371
D VSW +MISG H +KPD + + LS CA LGA++ GR +
Sbjct: 269 DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV 328
Query: 372 H--LKYAAENW--HCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIIS 427
H + A W H G A+VDMYAKCG I+TAL++F K +N+++
Sbjct: 329 HEYILTAGIKWDTHIGT------AIVDMYAKCGYIETALEIF--NGIRSKNVFTWNALLG 380
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM-STVYGV 486
GLA HG G ++ FEEM LG P+ VTF+A L AC H+GLVDEG++ F M S Y +
Sbjct: 381 GLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNL 440
Query: 487 NPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDV-ELAKLAC 545
P++EHYGC++DLL R GLL EA L+ MP K + I A+LSACK G + EL K
Sbjct: 441 FPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEIL 500
Query: 546 QELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKF 605
L +E + YV+LSN+ A + D+ A +R+ + GI K PG SY+E KF
Sbjct: 501 DSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE------KF 554
Query: 606 LAGDK 610
+ D+
Sbjct: 555 MTLDQ 559
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 273/514 (53%), Gaps = 17/514 (3%)
Query: 114 TFPYLLKSCAN-ARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
T +L+SC N A P +H ++++ FV L+ AY VF
Sbjct: 31 TLISVLRSCKNIAHVP----SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSY 86
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
+ + Y MI+GFV +GR+ + + M + PD Y + ++L AC D +V
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVC 142
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
R++H V + LG G + + ++++Y K G L A+++ + + V A T +++
Sbjct: 143 REIHAQVLK-LG-FGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAA--TVMINC 198
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
Y+ G ++ A LF + +D V WTAMI G + +E
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
V LS C+ LGALELGR +H EN + A+++MY++CG I+ A VF +
Sbjct: 259 VCVLSACSDLGALELGRWVH--SFVENQRMELSNFVGNALINMYSRCGDINEARRVF-RV 315
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
+DK I YN++ISGLA HG AI F +M G P+ VT VALL AC H GL+D
Sbjct: 316 MRDKDV-ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDI 374
Query: 473 GKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSAC 532
G + F SM V+ V PQ+EHYGC+VDLLGR G L EAY I N+P + + ++ LLSAC
Sbjct: 375 GLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSAC 434
Query: 533 KVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPG 592
K+HG++EL + + L E+ YV+LSN+ A + E+ +R+++ + GI+K PG
Sbjct: 435 KIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPG 494
Query: 593 WSYVEMNGALHKFLAGDKSHPEAKATELMLRDIN 626
S +E++ +H+FL GD +HP +A L+++N
Sbjct: 495 CSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELN 528
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 212/519 (40%), Gaps = 100/519 (19%)
Query: 7 SSSASYDRVKALLA--SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRH 64
S++ R K L++ SC+ I I A ++ T D F+ LI +T ++ +
Sbjct: 21 SNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCST-LDSVDY 79
Query: 65 SLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCAN 124
+ +FS V+NP+++L+ A+I S A + +LK+C
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC-- 137
Query: 125 ARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP---------- 174
+ ++H ++K F S V ++ Y + NA K+F++MP
Sbjct: 138 --DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVM 195
Query: 175 ---------------------VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDE 213
++D V + MI+G VR ++++ +M+ + +E
Sbjct: 196 INCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANE 255
Query: 214 YTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVV 273
+T V +LSACS L +GR VH V + L + + NAL++MY++CG
Sbjct: 256 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSN--FVGNALINMYSRCG--------- 304
Query: 274 SGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXX 333
D+ ARR+F M ++DV+S+ MISG + G
Sbjct: 305 ------------------------DINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 334 XXXXXXXXXXXMKPDEVDVVAALSECARLGALELG--------RRIHLKYAAENWHCGQN 385
+P++V +VA L+ C+ G L++G R +++ E++ C
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGC--- 397
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG---LG-KYAITL 441
+VD+ + G ++ A F + + I+ +++S HG LG K A L
Sbjct: 398 ------IVDLLGRVGRLEEAYR-FIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRL 450
Query: 442 FEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM 480
FE PD T+V L SG E + ESM
Sbjct: 451 FESEN-----PDSGTYVLLSNLYASSGKWKESTEIRESM 484
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 267/506 (52%), Gaps = 28/506 (5%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAY--KVFEQMPVRDCVSYNMMINGFVR 190
Q+H H+++ ++ L+ + Y +V E + R+ + +I G+
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 191 AGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELG-CLGDN 249
G+ ++ + G MR I P +T LL AC +++D +GRQ H +R G C
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF--- 183
Query: 250 ALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
+ N ++DMY KC ++ A +V + + V +WT L++AYA G++E A LF+ +
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEM--PERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 310 GERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGR 369
+D+V+WTAM++G++ ++ DEV V +S CA+LGA
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGAS---- 297
Query: 370 RIHLKYAAENWHCGQNGGFT--------CAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL 421
KYA Q G++ A++DMY+KCG+++ A++VF S + K
Sbjct: 298 ----KYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF--MSMNNKNVFT 351
Query: 422 YNSIISGLAHHGLGKYAITLFEEM-RLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM 480
Y+S+I GLA HG + A+ LF M + P+ VTFV L AC HSGLVD+G++ F+SM
Sbjct: 352 YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
Query: 481 STVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVEL 540
+GV P +HY C+VDLLGR G L EA LI M + + +W ALL AC++H + E+
Sbjct: 412 YQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEI 471
Query: 541 AKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSY-VEMN 599
A++A + L +E D Y++LSN+ A VRK I G++K P S+ V+ N
Sbjct: 472 AEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Query: 600 GALHKFLAGDKSHPEAKATELMLRDI 625
G +HKF G+ +HP + + L ++
Sbjct: 532 GQMHKFFPGNLNHPMSNKIQDKLEEL 557
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 176/446 (39%), Gaps = 75/446 (16%)
Query: 6 ASSSASYDRV---KALLASS-------CRTIQQALQIQAHMVVTGLHHDLFLSTALISFF 55
+++S ++ + K LL SS C + Q QI H++ GL ++ T LI
Sbjct: 32 SNNSGTFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTL 91
Query: 56 ATNHRALR-HSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFT 114
+ ++ R+ V + FLW A+I+ +++ FT
Sbjct: 92 TKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFT 151
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
F LLK+C + +LG Q H + R V+V N ++ Y A KVF++MP
Sbjct: 152 FSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP 211
Query: 175 VRDCVSYNMMINGFVRAGRAGC-------------------------------SMKVLGD 203
RD +S+ +I + R G C +++
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKC 263
M GIR DE T+ +SAC+ L + + + + D+ ++ +AL+DMY+KC
Sbjct: 272 MEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKC 331
Query: 264 GCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISG 323
G +E A V + N V ++S++ A+ G + A LF M V+ T
Sbjct: 332 GNVEEAVNVFMSMNNKN--VFTYSSMILGLATHGRAQEALHLFHYM-----VTQTE---- 380
Query: 324 YSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCG 383
+KP+ V V AL C+ G ++ GR++
Sbjct: 381 ---------------------IKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQP 419
Query: 384 QNGGFTCAVVDMYAKCGSIDTALDVF 409
+TC +VD+ + G + AL++
Sbjct: 420 TRDHYTC-MVDLLGRTGRLQEALELI 444
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/580 (30%), Positives = 295/580 (50%), Gaps = 34/580 (5%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRA--LRHSLRLFSLVTNPDLF 78
+CR++ + Q+ M+ + + ++ + LI F T L ++ +F + P ++
Sbjct: 14 ENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVY 73
Query: 79 LWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
+WN++I+ +S SPN FTFPY+LK+C+ R G +H +
Sbjct: 74 IWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFV 133
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
VK+ F +++V+ LLH Y + + +VFE +P + V++ +I+GFV R ++
Sbjct: 134 VKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAI 193
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
+ +M+ G++ +E +V LL AC +D G+ HG + + LG D
Sbjct: 194 EAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL-QGLG------------FD 240
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWT 318
Y + + G +V+ A TSL+ YA GD+ AR LFD M ER +VSW
Sbjct: 241 PYFQS-------------KVGFNVILA-TSLIDMYAKCGDLRTARYLFDGMPERTLVSWN 286
Query: 319 AMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
++I+GYS G + PD+V ++ + G +LG+ IH Y ++
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIH-AYVSK 345
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
++ CA+V+MYAK G ++A F +KK TI + +I GLA HG G A
Sbjct: 346 TGFV-KDAAIVCALVNMYAKTGDAESAKKAF--EDLEKKDTIAWTVVIIGLASHGHGNEA 402
Query: 439 ITLFEEMRLLG-LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
+++F+ M+ G PDG+T++ +L AC H GLV+EG++ F M ++G+ P +EHYGC+V
Sbjct: 403 LSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMV 462
Query: 498 DLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGA 557
D+L R G EA L+ MP K N IW ALL+ C +H ++EL + E
Sbjct: 463 DILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSG 522
Query: 558 RYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVE 597
YV+LSN+ A + + +R+++ + + K G S VE
Sbjct: 523 IYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 292/555 (52%), Gaps = 41/555 (7%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYC-------------- 158
FT +L S A R G ++H +VK +V V+N+LL+ Y
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 159 -VFRDAHN----------------AYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVL 201
V RD + A FEQM RD V++N MI+GF + G ++ +
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 202 GDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMY 260
M R + PD +TL ++LSAC++LE +G+Q+H + + +++NAL+ MY
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT--GFDISGIVLNALISMY 324
Query: 261 AKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAM 320
++CG +E A R++ + +T+L+ Y GD+ A+ +F + +RDVV+WTAM
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 321 ISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENW 380
I GY G +P+ + A LS + L +L G++IH
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH----GSAV 440
Query: 381 HCGQ--NGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
G+ + + A++ MYAK G+I +A F + ++ T+ + S+I LA HG + A
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAF-DLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 439 ITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVD 498
+ LFE M + GL PD +T+V + AC H+GLV++G++ F+ M V + P + HY C+VD
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559
Query: 499 LLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGAR 558
L GR GLL EA I MP + + V W +LLSAC+VH +++L K+A + LL +E ++
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGA 619
Query: 559 YVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKAT 618
Y L+N+ + + +EAA +RK++ + ++K G+S++E+ +H F D +HPE
Sbjct: 620 YSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEI 679
Query: 619 ELMLRDINMGVKSIG 633
+ ++ I +K +G
Sbjct: 680 YMTMKKIWDEIKKMG 694
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 198/431 (45%), Gaps = 49/431 (11%)
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
F N +L Y D + + F+Q+P RD VS+ MI G+ G+ +++V+GDM
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
GI P ++TL +L++ ++ G++VH + + LG G N + N+L++MYAKCG
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK-LGLRG-NVSVSNSLLNMYAKCGDPM 198
Query: 268 LAERVVSG--VRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYS 325
+A+ V VR+ +++W ++++ + G +++A F+QM ERD+V+W +MISG++
Sbjct: 199 MAKFVFDRMVVRD----ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN 254
Query: 326 HAGYXXXXXXX-XXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQ 384
GY + PD + + LS CA L L +G++IH +
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDI-- 312
Query: 385 NGGFTCAVVDMYAKCGSIDTA--------------------LDVFCK-----------TS 413
+G A++ MY++CG ++TA LD + K S
Sbjct: 313 SGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVS 372
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
+ + + ++I G HG AI LF M G P+ T A+L + G
Sbjct: 373 LKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHG 432
Query: 474 KKPFESM---STVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLS 530
K+ S +Y V+ ++ + + G ++ A + + + V W +++
Sbjct: 433 KQIHGSAVKSGEIYSVSVS----NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 531 ACKVHGDVELA 541
A HG E A
Sbjct: 489 ALAQHGHAEEA 499
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 194/700 (27%), Positives = 328/700 (46%), Gaps = 80/700 (11%)
Query: 8 SSASYDRVKALLASSC--------RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNH 59
SSA+ + AL++ + +I Q A +++ G +D+ L T L + +
Sbjct: 7 SSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLS-DL 65
Query: 60 RALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPN-HAFXXXXXXXXXXXXXXXXXFTFPYL 118
A+ ++ +F V PD+FL+N +++ S++ + H+ T+ +
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
+ + + R G +H V S + + + ++ Y F +A KVF++MP +D
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
+ +N MI+G+ + S++V D+ R D TL+ +L A + L++ R+G Q+H
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 238 LVYRELGCLGDNALLV------------------------------NALVDMYAKCGCLE 267
L + GC + +L NA++ Y G E
Sbjct: 246 LATKT-GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 268 LA-----ERVVSGVR-----------------------------NGKSVVAAWTSLVSAY 293
L+ E ++SG R N S + T+L + Y
Sbjct: 305 LSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVY 364
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
+ ++E AR+LFD+ E+ + SW AMISGY+ G P+ V +
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424
Query: 354 AALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTS 413
LS CA+LGAL LG+ +H + ++ + A++ MYAKCGSI A +F +
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIY--VSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
K K + +N++ISG HG G+ A+ +F EM G+ P VTF+ +L AC H+GLV EG
Sbjct: 483 K--KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
+ F SM YG P ++HY C+VD+LGR G L A I M + + +W LL AC+
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 534 VHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGW 593
+H D LA+ ++L ++ D+ +V+LSN+ + + +AA+VR+ + K PG+
Sbjct: 601 IHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGY 660
Query: 594 SYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+ +E+ H F +GD+SHP+ K L + ++ G
Sbjct: 661 TLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 199/692 (28%), Positives = 320/692 (46%), Gaps = 79/692 (11%)
Query: 12 YDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSL 71
Y+ ALL C ++++ QI + GL+ + F T L+S F + ++ + R+F
Sbjct: 36 YEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC-RYGSVDEAARVFEP 94
Query: 72 VTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLG 131
+ + L++ ++K + + + F YLLK C + +G
Sbjct: 95 IDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG 154
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRA 191
++H LVKS F +F L + Y R + A KVF++MP RD VS+N ++ G+ +
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 192 GRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRE--------- 242
G A +++++ M ++P T+V++L A S+L VG+++HG R
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 243 --------------------LGCLGDNALLVNALVDMYAK-------------------- 262
G L N + N+++D Y +
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 263 ------------CGCLELAER--------VVSGVRNGKSVVAAWTSLVSAYASRGDVEVA 302
C L ER V G+ SVV SL+S Y +V+ A
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV---NSLISMYCKCKEVDTA 391
Query: 303 RRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARL 362
+F ++ R +VSW AMI G++ G +KPD V+ ++ A L
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 363 GALELGRRIHLKYAAENWHC-GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL 421
+ IH C +N T A+VDMYAKCG+I A +F S+ TT
Sbjct: 452 SITHHAKWIH---GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTT-- 506
Query: 422 YNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMS 481
+N++I G HG GK A+ LFEEM+ + P+GVTF++++ AC HSGLV+ G K F M
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Query: 482 TVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA 541
Y + M+HYG +VDLLGR G L+EA+ I+ MP K ++ A+L AC++H +V A
Sbjct: 567 ENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
Query: 542 KLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGA 601
+ A + L + D G +V+L+N+ ++ VR ++ G++K PG S VE+
Sbjct: 627 EKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNE 686
Query: 602 LHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+H F +G +HP++K L + +K G
Sbjct: 687 VHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 183/625 (29%), Positives = 315/625 (50%), Gaps = 62/625 (9%)
Query: 2 LHPLASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRA 61
+ ++ ++ ++D V ++ AS I +Q+ +VV+G+ + + +L+S ++ R
Sbjct: 232 MDQISPNAVTFDCVLSVCASKL-LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR- 289
Query: 62 LRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKS 121
+ +LF +++ D WN +I + S TF LL S
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 122 CANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSY 181
+ Q+HC++++ +F+ +AL+ Y R A +F Q D V +
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF 409
Query: 182 NMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYR 241
MI+G++ G S+++ + I P+E TLV++L L ++GR++HG + +
Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 242 E-------LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
+ +GC A++DMYAKCG + LA +
Sbjct: 470 KGFDNRCNIGC---------AVIDMYAKCGRMNLAYEI---------------------- 498
Query: 295 SRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVA 354
F+++ +RD+VSW +MI+ + + + D V + A
Sbjct: 499 -----------FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 355 ALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK 411
ALS CA L + G+ IH +K++ + ++ ++DMYAKCG++ A++VF K
Sbjct: 548 ALSACANLPSESFGKAIHGFMIKHSLASDVYSES-----TLIDMYAKCGNLKAAMNVF-K 601
Query: 412 TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM-RLLGLVPDGVTFVALLCACGHSGLV 470
T K+K + +NSII+ +HG K ++ LF EM G+ PD +TF+ ++ +C H G V
Sbjct: 602 TMKEK-NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 471 DEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLS 530
DEG + F SM+ YG+ PQ EHY CVVDL GR G L+EAY + +MPF +A +W LL
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLG 720
Query: 531 ACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKP 590
AC++H +VELA++A +L+ ++ + YV++SN A+ + + VR + +QK
Sbjct: 721 ACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKI 780
Query: 591 PGWSYVEMNGALHKFLAGDKSHPEA 615
PG+S++E+N H F++GD +HPE+
Sbjct: 781 PGYSWIEINKRTHLFVSGDVNHPES 805
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 130/555 (23%), Positives = 231/555 (41%), Gaps = 85/555 (15%)
Query: 4 PLASSS----ASYDRVKALLASSCRT---IQQALQIQAHMVVTGLHHDLFLSTALISFFA 56
PL +SS + R +LL +C ++Q Q+ A ++V + D + ++ +A
Sbjct: 22 PLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYA 81
Query: 57 -----TNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS----LSPNHAFXXXXXXXXXXXX 107
++ + + L L P WN+II + L+ AF
Sbjct: 82 MCGSFSDCGKMFYRLDLRRSSIRP----WNSIISSFVRNGLLNQALAFYFKMLCFGVSPD 137
Query: 108 XXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSR-FHSHVFVANALLHFYCVFRDAHNA 166
TFP L+K+C + G+ V S + FVA++L+ Y +
Sbjct: 138 VS----TFPCLVKACVALKN-FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 167 YKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSL 226
K+F+++ +DCV +N+M+NG+ + G +K MR I P+ T +LS C+S
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK 252
Query: 227 EDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAW 286
+G Q+HGLV VVSGV S+
Sbjct: 253 LLIDLGVQLHGLV--------------------------------VVSGVDFEGSIK--- 277
Query: 287 TSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK 346
SL+S Y+ G + A +LF M D V+W MISGY +G +
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 347 PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
PD + + L ++ LE ++IH + + T A++D Y KC + A
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS--ISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 407 DVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGH 466
++F + + +++ ++ISG H+GL ++ +F + + + P+ +T V++L G
Sbjct: 396 NIFSQC--NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 467 SGLVDEG--------KKPFESMSTVYGVNPQMEHYGC-VVDLLGRGGLLSEAYHLILNMP 517
+ G KK F++ + GC V+D+ + G ++ AY + +
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNI----------GCAVIDMYAKCGRMNLAYEIFERLS 503
Query: 518 FKANAVIWRALLSAC 532
K + V W ++++ C
Sbjct: 504 -KRDIVSWNSMITRC 517
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 253/429 (58%), Gaps = 10/429 (2%)
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC 265
G ++PD YT+ L+ AC+ L + G QVHG+ R ++ + L+ +YA+ GC
Sbjct: 101 GNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRR--GFDNDPHVQTGLISLYAELGC 158
Query: 266 LELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYS 325
L+ +V + + V T++V+A A GDV AR+LF+ M ERD ++W AMISGY+
Sbjct: 159 LDSCHKVFNSIPCPDFVCR--TAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYA 216
Query: 326 HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQN 385
G +K + V +++ LS C +LGAL+ GR H Y N
Sbjct: 217 QVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAH-SYIERN-KIKIT 274
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM 445
+VD+YAKCG ++ A++VF ++K ++S ++GLA +G G+ + LF M
Sbjct: 275 VRLATTLVDLYAKCGDMEKAMEVF--WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLM 332
Query: 446 RLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGL 505
+ G+ P+ VTFV++L C G VDEG++ F+SM +G+ PQ+EHYGC+VDL R G
Sbjct: 333 KQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGR 392
Query: 506 LSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEH-DHGARYVMLSN 564
L +A +I MP K +A +W +LL A +++ ++EL LA +++L +E +HGA YV+LSN
Sbjct: 393 LEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGA-YVLLSN 451
Query: 565 MLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRD 624
+ AD + D + VR+++ + G++K PG S +E+NG +H+F GDKSHP+ + + +D
Sbjct: 452 IYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKD 511
Query: 625 INMGVKSIG 633
I+ ++ G
Sbjct: 512 ISRRLRLAG 520
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 175/427 (40%), Gaps = 71/427 (16%)
Query: 17 ALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFA-TNHRALRHSLRLFSLVTNP 75
ALL S T ++ QI A + V G D L + A ++H+ L ++ ++ P
Sbjct: 11 ALLDSGI-TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 76 DLFLWNAIIKAHSLSP--NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQ 133
LF N++I+AH SP +F +T +L+++C R GLQ
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 134 LHCHLVKSRFHSHVFVANALLHFYC----------VFR---------------------D 162
+H ++ F + V L+ Y VF D
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 163 AHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA 222
A K+FE MP RD +++N MI+G+ + G + ++ V M+ G++ + ++++LSA
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 223 CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV 282
C+ L GR H Y E + L LVD+YAKCG
Sbjct: 250 CTQLGALDQGRWAHS--YIERNKIKITVRLATTLVDLYAKCG------------------ 289
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
D+E A +F M E++V +W++ ++G + G+
Sbjct: 290 ---------------DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQ 334
Query: 343 XXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSI 402
+ P+ V V+ L C+ +G ++ G+R E Q + C +VD+YA+ G +
Sbjct: 335 DGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGC-LVDLYARAGRL 393
Query: 403 DTALDVF 409
+ A+ +
Sbjct: 394 EDAVSII 400
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 270/503 (53%), Gaps = 11/503 (2%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVF-RDAHNAYKVFEQMPVRDCVSYNMMINGFVRA 191
Q+H L+K+ S A+ +L F C D + AY VF ++ ++ +N +I GF R+
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRS 102
Query: 192 GRAGCSMKVLGDM--RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDN 249
++ + DM ++P T ++ A L R GRQ+HG+V +E L D+
Sbjct: 103 SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE--GLEDD 160
Query: 250 ALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
+ + N ++ MY CGCL A R+ G+ V AW S++ +A G ++ A+ LFD+M
Sbjct: 161 SFIRNTMLHMYVTCGCLIEAWRIFLGMIGFD--VVAWNSMIMGFAKCGLIDQAQNLFDEM 218
Query: 310 GERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGR 369
+R+ VSW +MISG+ G +KPD +V+ L+ CA LGA E GR
Sbjct: 219 PQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGR 278
Query: 370 RIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGL 429
IH +Y N N A++DMY KCG I+ L+VF KK +NS+I GL
Sbjct: 279 WIH-EYIVRN-RFELNSIVVTALIDMYCKCGCIEEGLNVF--ECAPKKQLSCWNSMILGL 334
Query: 430 AHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQ 489
A++G + A+ LF E+ GL PD V+F+ +L AC HSG V + F M Y + P
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPS 394
Query: 490 MEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELL 549
++HY +V++LG GLL EA LI NMP + + VIW +LLSAC+ G+VE+AK A + L
Sbjct: 395 IKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLK 454
Query: 550 AVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGD 609
++ D YV+LSN A +EA R + ++K G S +E++ +H+F++
Sbjct: 455 KLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCG 514
Query: 610 KSHPEAKATELMLRDINMGVKSI 632
+HP++ +L +N V +I
Sbjct: 515 GTHPKSAEIYSLLDILNWDVSTI 537
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 168/360 (46%), Gaps = 41/360 (11%)
Query: 6 ASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHS 65
+S S S + L+ + C T+++ QI A ++ TGL D ++ +++F + + ++
Sbjct: 18 SSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYA 77
Query: 66 LRLFSLVTNPDLFLWNAIIKAHSLS--PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCA 123
+F+ + + + F+WN II+ S S P A T+P + K+
Sbjct: 78 YLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYG 137
Query: 124 NARTPHLGLQLHCHLVKSRFHSHVFVANALLHFY----CVFRD----------------- 162
G QLH ++K F+ N +LH Y C+
Sbjct: 138 RLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNS 197
Query: 163 ----------AHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPD 212
A +F++MP R+ VS+N MI+GFVR GR ++ + +M+ ++PD
Sbjct: 198 MIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPD 257
Query: 213 EYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERV 272
+T+V+LL+AC+ L GR +H + R L N+++V AL+DMY KCGC+E V
Sbjct: 258 GFTMVSLLNACAYLGASEQGRWIHEYIVRNRFEL--NSIVVTALIDMYCKCGCIEEGLNV 315
Query: 273 VSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG----ERDVVSWTAMISGYSHAG 328
K ++ W S++ A+ G E A LF ++ E D VS+ +++ +H+G
Sbjct: 316 FECA--PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
FT LL +CA G +H ++V++RF + V AL+ YC VFE
Sbjct: 259 FTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFEC 318
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
P + +N MI G G +M + ++ G+ PD + + +L+AC+ +
Sbjct: 319 APKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
+ L+ +E + + +V++ G LE AE ++ + + V W+SL+SA
Sbjct: 379 DEFFRLM-KEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTV-IWSSLLSA 436
Query: 293 YASRGDVEVARR 304
G+VE+A+R
Sbjct: 437 CRKIGNVEMAKR 448
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 276/549 (50%), Gaps = 53/549 (9%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSH-VFVANALLHFYCVFRDA-HNAYKVFEQMPV 175
LL SC N R Q+H +K + F +LH DA A ++ P
Sbjct: 11 LLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 176 RDCVSYNMMINGFVRAGRAGCSMKVLGDM--RGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
D +N ++ G+ + S+ V +M +GF + PD ++ ++ A + R G
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGF-VFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERV---------------VSGVRN 278
Q+H + L + + L+ MY CGC+E A +V ++
Sbjct: 127 QMHCQALKH--GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 279 GKSVVAA--------------WTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGY 324
G V A W +++ Y G++E A+R+F +M RD VSW+ MI G
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 325 SHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH--LKYAAENWHC 382
+H G M P+EV + LS C++ G+ E G+ +H ++ A +W
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 383 GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLF 442
N A++DMY++CG++ A VF + ++K+ + + S+I+GLA HG G+ A+ LF
Sbjct: 305 SVNN----ALIDMYSRCGNVPMARLVF-EGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLF 359
Query: 443 EEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGR 502
EM G+ PDG++F++LL AC H+GL++EG+ F M VY + P++EHYGC+VDL GR
Sbjct: 360 NEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGR 419
Query: 503 GGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVML 562
G L +AY I MP A++WR LL AC HG++ELA+ Q L ++ ++ V+L
Sbjct: 420 SGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLL 479
Query: 563 SNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDK-------SHPEA 615
SN A + + AS+RK++ I+K WS VE+ ++KF AG+K +H +
Sbjct: 480 SNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKL 539
Query: 616 KATELMLRD 624
K L L+D
Sbjct: 540 KEIILRLKD 548
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 212/517 (41%), Gaps = 122/517 (23%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATN-HRALRHSLRLFSLVTNPDL 77
L +SC+ ++ QI + G+ D + + LI A + AL ++ RL PD
Sbjct: 11 LLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDA 70
Query: 78 FLWNAIIKAHSLSPN-HAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHC 136
F++N +++ +S S H F+F +++K+ N R+ G Q+HC
Sbjct: 71 FMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHC 130
Query: 137 HLVKSRFHSHVFVANALLHFY----CV-------------------------FR--DAHN 165
+K SH+FV L+ Y CV FR D
Sbjct: 131 QALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAG 190
Query: 166 AYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM--------------------- 204
A ++F++M VR+ S+N+M+ G+++AG + ++ +M
Sbjct: 191 AREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSF 250
Query: 205 ----------RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN 254
+ G+ P+E +L +LSACS G+ +HG V E + N
Sbjct: 251 NESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV--EKAGYSWIVSVNN 308
Query: 255 ALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV 314
AL+DMY++CG + +A V G++ + +V +WTS+++ A G E A RLF++M V
Sbjct: 309 ALIDMYSRCGNVPMARLVFEGMQEKRCIV-SWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG------ 368
PD + ++ L C+ G +E G
Sbjct: 368 T-------------------------------PDGISFISLLHACSHAGLIEEGEDYFSE 396
Query: 369 --RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSII 426
R H++ E++ C +VD+Y + G + A D C+ T I++ +++
Sbjct: 397 MKRVYHIEPEIEHYGC---------MVDLYGRSGKLQKAYDFICQMPI-PPTAIVWRTLL 446
Query: 427 SGLAHHGLGKYAITLFEEM--RLLGLVPDGVTFVALL 461
+ HG I L E++ RL L P+ + LL
Sbjct: 447 GACSSHG----NIELAEQVKQRLNELDPNNSGDLVLL 479
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 270/536 (50%), Gaps = 48/536 (8%)
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGR 193
+H ++ + + L+ Y +D +A KVF+++P R+ + N+MI +V G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 194 AGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLV 253
G +KV G M G +RPD YT +L ACS +GR++HG + +G L +
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK-VG-LSSTLFVG 178
Query: 254 NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYAS--RGD--VEVARRL---- 305
N LV MY KCG L A V+ + + V +W SLV YA R D +EV R +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEM--SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 306 -----------------------------FDQMGERDVVSWTAMISGYSHAGYXXXXXXX 336
F +MG++ +VSW MI Y
Sbjct: 237 ISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVEL 296
Query: 337 XXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMY 396
+PD V + + L C AL LG++IH E N A++DMY
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH--GYIERKKLIPNLLLENALIDMY 354
Query: 397 AKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVT 456
AKCG ++ A DVF + + + + ++IS G G A+ LF +++ GLVPD +
Sbjct: 355 AKCGCLEKARDVF--ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 457 FVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM 516
FV L AC H+GL++EG+ F+ M+ Y + P++EH C+VDLLGR G + EAY I +M
Sbjct: 413 FVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 472
Query: 517 PFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAA 576
+ N +W ALL AC+VH D ++ LA +L + + YV+LSN+ A + +E
Sbjct: 473 SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVT 532
Query: 577 SVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSI 632
++R + + G++K PG S VE+N +H FL GD+SHP+ ++ + R++++ VK +
Sbjct: 533 NIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQ---SDEIYRELDVLVKKM 585
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 145/330 (43%), Gaps = 42/330 (12%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFY--CVFRDAHNAYKVF 170
+TFP +LK+C+ + T +G ++H K S +FV N L+ Y C F A V
Sbjct: 141 YTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGF--LSEARLVL 198
Query: 171 EQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQR 230
++M RD VS+N ++ G+ + R +++V +M I D T+ +LL A S+ +
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 231 VGRQVHGLVYR-----------ELGCLGDNALLVNALVDMYAK----------------- 262
V V + ++ +G NA+ V A V++Y++
Sbjct: 259 V-MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEA-VELYSRMEADGFEPDAVSITSVL 316
Query: 263 --CG---CLELAERVVSGVRNGKSV--VAAWTSLVSAYASRGDVEVARRLFDQMGERDVV 315
CG L L +++ + K + + +L+ YA G +E AR +F+ M RDVV
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 316 SWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKY 375
SWTAMIS Y +G + PD + V L+ C+ G LE GR K
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC-FKL 435
Query: 376 AAENWHCGQNGGFTCAVVDMYAKCGSIDTA 405
+++ +VD+ + G + A
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/605 (30%), Positives = 293/605 (48%), Gaps = 44/605 (7%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
QI AH++ GL D L LI + R + + +LF+ + N ++ W ++ + +
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVI-AAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
H + +L SCA+ G Q+H + +K+ + +V
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC---SMKVLGDMRGF 207
N+L+ Y +A KVF+ D V +N MI G+ R G ++ + DMR
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR 448
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
IRP T V+LL A +SL + +Q+HGL+++ L + +AL+D+Y+ C CL+
Sbjct: 449 LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKY--GLNLDIFAGSALIDVYSNCYCLK 506
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
+R +FD+M +D+V W +M +GY
Sbjct: 507 ---------------------------------DSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG 387
+PDE ++ L +++LG+ H + C N
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC--NPY 591
Query: 388 FTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRL 447
T A++DMYAKCGS + A F S + + +NS+IS A+HG GK A+ + E+M
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAF--DSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 448 LGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLS 507
G+ P+ +TFV +L AC H+GLV++G K FE M +G+ P+ EHY C+V LLGR G L+
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLN 708
Query: 508 EAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLA 567
+A LI MP K A++WR+LLS C G+VELA+ A + + + + MLSN+ A
Sbjct: 709 KARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYA 768
Query: 568 DMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINM 627
EA VR+ + G+ K PG S++ +N +H FL+ DKSH +A +L D+ +
Sbjct: 769 SKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLV 828
Query: 628 GVKSI 632
++ +
Sbjct: 829 QIRGV 833
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 222/510 (43%), Gaps = 56/510 (10%)
Query: 32 IQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSP 91
+ ++V GL D +LS LI+ + + + ++ ++F + +L W+ ++ A +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLY-SRAGGMVYARKVFEKMPERNLVSWSTMVSACN--- 121
Query: 92 NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANA------RTPHLGLQLHCHLVKSRFHS 145
+H Y+L S A R + QL LVKS F
Sbjct: 122 HHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDR 181
Query: 146 HVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMR 205
V+V L+ FY + A VF+ +P + V++ MI+G V+ GR+ S+++ +
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC 265
+ PD Y L T+LSACS L G+Q+H + R L +A L+N L+D Y KCG
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY--GLEMDASLMNVLIDSYVKCGR 299
Query: 266 LELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYS 325
+ A ++ +G+ N + +WT+L+S Y + A LF M +
Sbjct: 300 VIAAHKLFNGMPNKN--IISWTTLLSGYKQNALHKEAMELFTSMSK-------------- 343
Query: 326 HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQN 385
+KPD + L+ CA L AL G ++H N G +
Sbjct: 344 -----------------FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN--LGND 384
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLG---KYAITLF 442
T +++DMYAKC + A VF + +L+N++I G + G A+ +F
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFA--AADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 443 EEMRLLGLVPDGVTFVALLCACGHSGLVDEG-KKPFESMSTVYGVNPQMEHYGCVVDLLG 501
+MR + P +TFV+LL A + L G K + YG+N + ++D+
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRAS--ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYS 500
Query: 502 RGGLLSEAYHLILNMPFKANAVIWRALLSA 531
L ++ + M K + VIW ++ +
Sbjct: 501 NCYCLKDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 118/517 (22%), Positives = 216/517 (41%), Gaps = 57/517 (11%)
Query: 30 LQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSL 89
Q+Q+ +V +G D+++ T LI F+ + + ++ +F + W +I
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGN-IDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 90 SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFV 149
+ +L +C+ G Q+H H+++ +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 150 ANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGI 209
N L+ Y A+K+F MP ++ +S+ +++G+ + +M++ M FG+
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
Query: 210 RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELA 269
+PD Y ++L++C+SL G QVH Y LG+++ + N+L+DMYAKC CL
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHA--YTIKANLGNDSYVTNSLIDMYAKCDCL--- 401
Query: 270 ERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY 329
AR++FD DVV + AMI GYS G
Sbjct: 402 ------------------------------TDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 330 XX---XXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAE-NWHC 382
++P + V+ L A L +L L ++IH KY +
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 383 GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLF 442
G A++D+Y+ C + + VF K +++NS+ +G + A+ LF
Sbjct: 492 GS------ALIDVYSNCYCLKDSRLVF--DEMKVKDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 443 EEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGV--NPQMEHYGCVVDLL 500
E++L PD TF ++ A G+ V G++ F G+ NP + + ++D+
Sbjct: 544 LELQLSRERPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRGLECNPYITN--ALLDMY 600
Query: 501 GRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGD 537
+ G +A H + + V W +++S+ HG+
Sbjct: 601 AKCGSPEDA-HKAFDSAASRDVVCWNSVISSYANHGE 636
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 4/284 (1%)
Query: 20 ASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFL 79
++S ++ + QI M GL+ D+F +ALI + +N L+ S +F + DL +
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY-SNCYCLKDSRLVFDEMKVKDLVI 522
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
WN++ + + FTF ++ + N + LG + HC L+
Sbjct: 523 WNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLL 582
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMK 199
K + ++ NALL Y +A+K F+ RD V +N +I+ + G +++
Sbjct: 583 KRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQ 642
Query: 200 VLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDM 259
+L M GI P+ T V +LSACS G + L+ R G + V +V +
Sbjct: 643 MLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYV-CMVSL 700
Query: 260 YAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVAR 303
+ G L A ++ + K W SL+S A G+VE+A
Sbjct: 701 LGRAGRLNKARELIEKMPT-KPAAIVWRSLLSGCAKAGNVELAE 743
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 150/359 (41%), Gaps = 52/359 (14%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
F LL+ A+ H +H ++ +++N L++ Y A KVFE+MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
R+ VS++ M++ G S+ V + R P+EY L + + ACS L+ + GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--GR 164
Query: 234 ----QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSL 289
Q+ + + + + L+D Y K G ++ A V + +V WT++
Sbjct: 165 WMVFQLQSFLVK--SGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV--TWTTM 220
Query: 290 VSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE 349
+S G V+ +LF Q+ E +VV PD
Sbjct: 221 ISGCVKMGRSYVSLQLFYQLMEDNVV-------------------------------PDG 249
Query: 350 VDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
+ LS C+ L LE G++IH L+Y E + ++D Y KCG + A
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGLE-----MDASLMNVLIDSYVKCGRVIAAH 304
Query: 407 DVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACG 465
+F K I + +++SG + L K A+ LF M GL PD ++L +C
Sbjct: 305 KLF--NGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 17/252 (6%)
Query: 289 LVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG-YXXXXXXXXXXXXXXXMKP 347
L++ Y+ G + AR++F++M ER++VSW+ M+S +H G Y P
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 348 DEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAV------VDMYAKCGS 401
+E + + + C+ L GR + + +++ GF V +D Y K G+
Sbjct: 145 NEYILSSFIQACSGLD----GRGRWMVFQLQSFLV--KSGFDRDVYVGTLLIDFYLKDGN 198
Query: 402 IDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL 461
ID A VF + +K+T+ + ++ISG G ++ LF ++ +VPDG +L
Sbjct: 199 IDYARLVF--DALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 462 CACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKAN 521
AC + EG K + YG+ ++D + G + A+ L MP K N
Sbjct: 257 SACSILPFL-EGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK-N 314
Query: 522 AVIWRALLSACK 533
+ W LLS K
Sbjct: 315 IISWTTLLSGYK 326
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/598 (31%), Positives = 300/598 (50%), Gaps = 26/598 (4%)
Query: 22 SCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRA--------LRHSLRL--FSL 71
SC+T QI ++ TG+ + L+T ++ FA++ R + H + FS
Sbjct: 21 SCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSF 80
Query: 72 VTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLG 131
D FLWNA+IK+HS + F+ +LK+C+ G
Sbjct: 81 GEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGG 140
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRA 191
+Q+H L K+ S +F+ N L+ Y + ++F++MP RD VSYN MI+G+V+
Sbjct: 141 MQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKC 200
Query: 192 GRAGCSMKVLGDMRGFGIRPDEY-TLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNA 250
G + ++ F + P E L++ S S G + ++ ++ +
Sbjct: 201 GLIVSAREL------FDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMP--EKDL 252
Query: 251 LLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG 310
+ N+++D Y K G +E A+ + + + V W +++ YA G V A+ LFDQM
Sbjct: 253 ISWNSMIDGYVKHGRIEDAKGLFDVM--PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 311 ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXX-MKPDEVDVVAALSECARLGALELGR 369
RDVV++ +M++GY Y + PD+ +V L A+LG L
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 370 RIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGL 429
+HL + ++ G G A++DMY+KCGSI A+ VF + K+ +N++I GL
Sbjct: 371 DMHLYIVEKQFYLG--GKLGVALIDMYSKCGSIQHAMLVF--EGIENKSIDHWNAMIGGL 426
Query: 430 AHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQ 489
A HGLG+ A + ++ L L PD +TFV +L AC HSGLV EG FE M + + P+
Sbjct: 427 AIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPR 486
Query: 490 MEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELL 549
++HYGC+VD+L R G + A +LI MP + N VIWR L+AC H + E +L + L+
Sbjct: 487 LQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLI 546
Query: 550 AVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLA 607
+ + YV+LSNM A + VR + I+K PG S++E++G +H+F
Sbjct: 547 LQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/639 (29%), Positives = 301/639 (47%), Gaps = 70/639 (10%)
Query: 38 VTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXX 97
VT +D L+ AL F + R + +L+LF + D FLWN +IK + +
Sbjct: 58 VTKQVNDPALTRALRGF--ADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV 115
Query: 98 XXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFY 157
FT+P+++KS A + G ++H ++K F S V+V N+L+ Y
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Query: 158 CVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLV 217
A +A KVFE+MP RD VS+N MI+G++ G S+ + +M G +PD ++ +
Sbjct: 176 MKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTM 235
Query: 218 TLLSACSSLEDQRVGRQVHGLVYRELGCLGD----------------------------- 248
+ L ACS + ++G+++H R GD
Sbjct: 236 SALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ 295
Query: 249 -NALLVNALVDMYAKCG-------CLE-------LAERVV--------SGVRNGKSV--- 282
N + N ++ YA+ G C + L V+ S + G+++
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGY 355
Query: 283 ---------VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXX 333
+ T+L+ Y G ++ A +FD+M E++V+SW ++I+ Y G
Sbjct: 356 AMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSA 415
Query: 334 XXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVV 393
+ PD + + L A +L GR IH + N ++V
Sbjct: 416 LELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW--SNTIILNSLV 473
Query: 394 DMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPD 453
MYA CG ++ A F K + +NSII A HG G+ ++ LF EM + P+
Sbjct: 474 HMYAMCGDLEDARKCFNHILL--KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPN 531
Query: 454 GVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLI 513
TF +LL AC SG+VDEG + FESM YG++P +EHYGC++DL+GR G S A +
Sbjct: 532 KSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFL 591
Query: 514 LNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHD 573
MPF A IW +LL+A + H D+ +A+ A +++ +EHD+ YV+L NM A+ + +
Sbjct: 592 EEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWE 651
Query: 574 EAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSH 612
+ ++ +++ GI + S VE G H F GD+SH
Sbjct: 652 DVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSH 690
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 135/306 (44%), Gaps = 6/306 (1%)
Query: 26 IQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIK 85
I + I + + G + L TALI + + L+ + +F + ++ WN+II
Sbjct: 346 ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQ-LKSAEVIFDRMAEKNVISWNSIIA 404
Query: 86 AHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHS 145
A+ + + T +L + A + + G ++H ++VKSR+ S
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS 464
Query: 146 HVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMR 205
+ + N+L+H Y + D +A K F + ++D VS+N +I + G S+ + +M
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC 265
+ P++ T +LL+ACS G + + RE G + ++D+ + G
Sbjct: 525 ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYG-IDPGIEHYGCMLDLIGRTGN 583
Query: 266 LELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQ---MGERDVVSWTAMIS 322
A+R + + + W SL++A + D+ +A +Q M + + +++
Sbjct: 584 FSAAKRFLEEMPFVPT-ARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLN 642
Query: 323 GYSHAG 328
Y+ AG
Sbjct: 643 MYAEAG 648
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/535 (31%), Positives = 270/535 (50%), Gaps = 39/535 (7%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRF-HSHVFVANALLHFYC----------VFRDAH-- 164
LL+ C + ++ G +H HL + F + ++N L+ Y VF H
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 165 NAYK-------------------VFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMR 205
N Y VF+ MP RD VS+N M+ G+ + G ++ + R
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC 265
GI+ +E++ LL+AC ++ RQ HG V + N +L +++D YAKCG
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVL--VAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 266 LELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYS 325
+E A+R + + WT+L+S YA GD+E A +LF +M E++ VSWTA+I+GY
Sbjct: 230 MESAKRCFDEMTVKD--IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 326 HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQN 385
G +KP++ + L A + +L G+ IH N N
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN--VRPN 345
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM 445
+++DMY+K GS++ + VF + DK + +N++IS LA HGLG A+ + ++M
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 446 RLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGL 505
+ P+ T V +L AC HSGLV+EG + FESM+ +G+ P EHY C++DLLGR G
Sbjct: 405 IKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 506 LSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNM 565
E I MPF+ + IW A+L C++HG+ EL K A EL+ ++ + A Y++LS++
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSI 524
Query: 566 LADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATEL 620
AD + + +R + + K S++E+ + F D SH A+ E+
Sbjct: 525 YADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEI 579
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 34/273 (12%)
Query: 68 LFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANART 127
+F + D+ WN ++ ++ N F+F LL +C +R
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 128 PHLGLQLHCHLVKSRFHSHVFVA-------------------------------NALLHF 156
L Q H ++ + F S+V ++ L+
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 157 YCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTL 216
Y D A K+F +MP ++ VS+ +I G+VR G ++ + M G++P+++T
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 217 VTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV 276
+ L A +S+ R G+++HG + R + NA+++++L+DMY+K G LE +ERV +
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRT--NVRPNAIVISSLIDMYSKSGSLEASERVFR-I 371
Query: 277 RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
+ K W +++SA A G A R+ D M
Sbjct: 372 CDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 285 bits (728), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 191/669 (28%), Positives = 313/669 (46%), Gaps = 80/669 (11%)
Query: 20 ASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFAT--NHRALRHSLRLFSLVTNPDL 77
+S +++++ + ++ GL D+ L +LI+ + T +H + RH F + D+
Sbjct: 14 TNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI--RSDV 71
Query: 78 FLWNAIIKAHSL-SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHC 136
++WN+++ +S S H FTFP ++K+ LG +H
Sbjct: 72 YIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHT 131
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC 196
+VKS + V VA++L+ Y F N+ +VF++MP RD S+N +I+ F ++G A
Sbjct: 132 LVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEK 191
Query: 197 SMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNAL 256
++++ G M G P+ +L +SACS L G+++H ++ L + + +AL
Sbjct: 192 ALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE--YVNSAL 249
Query: 257 VDMYAKC-----------------------------------GCLELAER-VVSGVRNGK 280
VDMY KC C+E+ R ++ G R +
Sbjct: 250 VDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQ 309
Query: 281 SVVAAW--------------------------------TSLVSAYASRGDVEVARRLFDQ 308
+ + + SL+ Y G+ +A +F +
Sbjct: 310 TTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK 369
Query: 309 MGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
+ SW MIS Y G +KPD V + L C++L ALE G
Sbjct: 370 TQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKG 429
Query: 369 RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISG 428
++IHL + + A++DMY+KCG+ A +F S KK + + +IS
Sbjct: 430 KQIHLSISESRLETDE--LLLSALLDMYSKCGNEKEAFRIF--NSIPKKDVVSWTVMISA 485
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNP 488
HG + A+ F+EM+ GL PDGVT +A+L ACGH+GL+DEG K F M + YG+ P
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEP 545
Query: 489 QMEHYGCVVDLLGRGGLLSEAYHLILNMPFKA-NAVIWRALLSACKVHGDVELAKLACQE 547
+EHY C++D+LGR G L EAY +I P + NA + L SAC +H + L +
Sbjct: 546 IIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARL 605
Query: 548 LLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLA 607
L+ D + Y++L N+ A + D A VR + +G++K PG S++EM+ + F A
Sbjct: 606 LVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFA 665
Query: 608 GDKSHPEAK 616
D+SH A+
Sbjct: 666 EDRSHLRAE 674
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/588 (30%), Positives = 288/588 (48%), Gaps = 46/588 (7%)
Query: 32 IQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSP 91
+ A+ V T L +++ ++L+ + + + S R+FS + + W AII +
Sbjct: 130 LHAYAVKTSLLSSVYVGSSLLDMYKRVGK-IDKSCRVFSEMPFRNAVTWTAIITGLVHAG 188
Query: 92 NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVAN 151
+ +TF LK+CA R G +H H++ F + + VAN
Sbjct: 189 RYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVAN 248
Query: 152 ALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRP 211
+L Y + + +FE M RD VS+ +I + R G+ +++ MR + P
Sbjct: 249 SLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPP 308
Query: 212 DEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAER 271
+E T ++ SAC+SL G Q+H V LG L D+ + N+++ MY+ CG
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVL-SLG-LNDSLSVSNSMMKMYSTCG------- 359
Query: 272 VVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXX 331
+LVSA LF M RD++SW+ +I GY AG+
Sbjct: 360 ----------------NLVSASV----------LFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 332 XXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGF 388
KP + + + LS + +E GR++H L + E QN
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLE-----QNSTV 448
Query: 389 TCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLL 448
++++MY+KCGSI A +F +T +D ++ ++I+G A HG K AI LFE+ +
Sbjct: 449 RSSLINMYSKCGSIKEASMIFGETDRDDIVSL--TAMINGYAEHGKSKEAIDLFEKSLKV 506
Query: 449 GLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSE 508
G PD VTF+++L AC HSG +D G F M Y + P EHYGC+VDLL R G LS+
Sbjct: 507 GFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSD 566
Query: 509 AYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLAD 568
A +I M +K + V+W LL ACK GD+E + A + +L ++ V L+N+ +
Sbjct: 567 AEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSS 626
Query: 569 MDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAK 616
+EAA+VRK + G+ K PGWS +++ + F++GD+ HP+++
Sbjct: 627 TGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSE 674
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 191/483 (39%), Gaps = 47/483 (9%)
Query: 58 NHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPN--HAFXXXXXXXXXXXXXXXXXFTF 115
N LR + ++F + + D+ W +IIK + + N A
Sbjct: 52 NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 116 PYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPV 175
+LK+C + G LH + VK+ S V+V ++LL Y + +VF +MP
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 176 RDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQV 235
R+ V++ +I G V AGR + +M D YT L AC+ L + G+ +
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 236 HGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYAS 295
H V + + N+L MY +CG E+ + + + V +WTSL+ AY
Sbjct: 232 HTHVI--VRGFVTTLCVANSLATMYTECG--EMQDGLCLFENMSERDVVSWTSLIVAYKR 287
Query: 296 RGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAA 355
G A F +M V P+E +
Sbjct: 288 IGQEVKAVETFIKMRNSQV-------------------------------PPNEQTFASM 316
Query: 356 LSECARLGALELGRRIHLKYAAENWHCGQNGGFTC--AVVDMYAKCGSIDTALDVFCKTS 413
S CA L L G ++H + G N + +++ MY+ CG++ +A +F
Sbjct: 317 FSACASLSRLVWGEQLHCNVLS----LGLNDSLSVSNSMMKMYSTCGNLVSASVLF--QG 370
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
+ I +++II G G G+ F MR G P +LL G+ ++ EG
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI-EG 429
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
+ +++ +G+ ++++ + G + EA +I + + V A+++
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA-SMIFGETDRDDIVSLTAMINGYA 488
Query: 534 VHG 536
HG
Sbjct: 489 EHG 491
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 113/522 (21%), Positives = 203/522 (38%), Gaps = 99/522 (18%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
R ++ I H++V G L ++ +L + + T ++ L LF ++ D+ W ++
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMY-TECGEMQDGLCLFENMSERDVVSWTSL 281
Query: 84 IKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
I A+ TF + +CA+ G QLHC+++
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL 341
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
+ + V+N+++ Y + +A +F+ M RD +S++ +I G+ +AG K
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW 401
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLG--DNALLVNALVDMYA 261
MR G +P ++ L +LLS ++ GRQVH L C G N+ + ++L++MY+
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALAL----CFGLEQNSTVRSSLINMYS 457
Query: 262 KCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMI 321
KC G ++ A +F + D+VS TAMI
Sbjct: 458 KC---------------------------------GSIKEASMIFGETDRDDIVSLTAMI 484
Query: 322 SGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG--------RRIHL 373
+GY+ G +PD V ++ L+ C G L+LG ++
Sbjct: 485 NGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNM 544
Query: 374 KYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG 433
+ A E++ C +VD+ + G + A + + S K
Sbjct: 545 RPAKEHYGC---------MVDLLCRAGRLSDAEKMINEMSWKK----------------- 578
Query: 434 LGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQ-MEH 492
D V + LL AC G ++ G++ E + ++P
Sbjct: 579 -------------------DDVVWTTLLIACKAKGDIERGRRAAER---ILELDPTCATA 616
Query: 493 YGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKV 534
+ ++ G L EA ++ NM KA VI S+ K+
Sbjct: 617 LVTLANIYSSTGNLEEAANVRKNM--KAKGVIKEPGWSSIKI 656
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 137/313 (43%), Gaps = 6/313 (1%)
Query: 13 DRVKALLASSCRTIQQAL---QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLF 69
++ A + S+C ++ + + Q+ +++ GL+ L +S +++ ++T + S+ LF
Sbjct: 310 EQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV-LF 368
Query: 70 SLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPH 129
+ D+ W+ II + + F LL N
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIE 428
Query: 130 LGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFV 189
G Q+H + + V ++L++ Y A +F + D VS MING+
Sbjct: 429 GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 190 RAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDN 249
G++ ++ + G RPD T +++L+AC+ +G ++ +E +
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMM-QETYNMRPA 547
Query: 250 ALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
+VD+ + G L AE++++ + K V WT+L+ A ++GD+E RR +++
Sbjct: 548 KEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV-WTTLLIACKAKGDIERGRRAAERI 606
Query: 310 GERDVVSWTAMIS 322
E D TA+++
Sbjct: 607 LELDPTCATALVT 619
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 104/258 (40%), Gaps = 17/258 (6%)
Query: 297 GDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXX--XMKPDEVDVVA 354
G++ AR++FD+M D+VSWT++I Y A + PD +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 355 ALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSK 414
L C + + G +H + G +++DMY + G ID + VF +
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVG--SSLLDMYKRVGKIDKSCRVF--SEM 169
Query: 415 DKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
+ + + +II+GL H G K +T F EM + D TF L AC V G
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYG- 228
Query: 475 KPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKV 534
K + V G + + + G + + L NM + + V W +L+ A K
Sbjct: 229 KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKR 287
Query: 535 HGDVELAKLACQELLAVE 552
G QE+ AVE
Sbjct: 288 IG---------QEVKAVE 296
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 191/589 (32%), Positives = 292/589 (49%), Gaps = 77/589 (13%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
FTFP++ K+CA +H HL+KS F S VFV A + + A KVFE+
Sbjct: 53 FTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFER 112
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQ--- 229
MP RD ++N M++GF ++G + + +MR I PD T++TL+ + +S E
Sbjct: 113 MPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS-ASFEKSLKL 171
Query: 230 ---------RVGRQVHGLV-------YRELGCLGDNALLV--------------NALVDM 259
R+G V V Y + G L D+A LV N++
Sbjct: 172 LEAMHAVGIRLGVDVQVTVANTWISTYGKCGDL-DSAKLVFEAIDRGDRTVVSWNSMFKA 230
Query: 260 YAKCG---------CLELAER----------VVSGVRNGKSV------------------ 282
Y+ G CL L E + + +N +++
Sbjct: 231 YSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQD 290
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
+ A + +S Y+ D AR LFD M R VSWT MISGY+ G
Sbjct: 291 IEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIK 350
Query: 343 XXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC-AVVDMYAKCGS 401
KPD V +++ +S C + G+LE G+ I + A+ + C ++ C A++DMY+KCGS
Sbjct: 351 SGEKPDLVTLLSLISGCGKFGSLETGKWIDAR--ADIYGCKRDNVMICNALIDMYSKCGS 408
Query: 402 IDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL 461
I A D+F T + KT + + ++I+G A +G+ A+ LF +M L P+ +TF+A+L
Sbjct: 409 IHEARDIFDNTPE--KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVL 466
Query: 462 CACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKAN 521
AC HSG +++G + F M VY ++P ++HY C+VDLLGR G L EA LI NM K +
Sbjct: 467 QACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPD 526
Query: 522 AVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKA 581
A IW ALL+ACK+H +V++A+ A + L +E A YV ++N+ A D A +R
Sbjct: 527 AGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSI 586
Query: 582 IDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVK 630
+ I+K PG S +++NG H F G+ H E + L +++ K
Sbjct: 587 MKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAK 635
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 138/332 (41%), Gaps = 41/332 (12%)
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
WN++ KA+S+ TF L SC N T G +H H +
Sbjct: 224 WNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMK 199
+ N + Y D +A +F+ M R CVS+ +MI+G+ G ++
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 200 VLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL--VYRELGCLGDNALLVNALV 257
+ M G +PD TL++L+S C G+ + +Y GC DN ++ NAL+
Sbjct: 344 LFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIY---GCKRDNVMICNALI 400
Query: 258 DMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSW 317
DMY+KCG + A + + V WT++++ YA G A +LF +M + D
Sbjct: 401 DMYSKCGSIHEARDIFDNT--PEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY--- 455
Query: 318 TAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG-RRIHLKYA 376
KP+ + +A L CA G+LE G H+
Sbjct: 456 ----------------------------KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 377 AENWHCGQNGGFTCAVVDMYAKCGSIDTALDV 408
N G + ++C +VD+ + G ++ AL++
Sbjct: 488 VYNISPGLD-HYSC-MVDLLGRKGKLEEALEL 517
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 259/456 (56%), Gaps = 11/456 (2%)
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
V+YN MI+G+V G +++++ M GI DE+T +++ AC++ ++G+QVH
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 239 VYRELGCLGDNAL-LVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
V R D + N+LV +Y KCG + A R + K +V+ W +L+S Y S G
Sbjct: 312 VLRR----EDFSFHFDNSLVSLYYKCGKFDEA-RAIFEKMPAKDLVS-WNALLSGYVSSG 365
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS 357
+ A+ +F +M E++++SW MISG + G+ +P + A+
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 358 ECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKK 417
CA LGA G++ H + + + G A++ MYAKCG ++ A VF +
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAG--NALITMYAKCGVVEEARQVF--RTMPCL 481
Query: 418 TTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPF 477
++ +N++I+ L HG G A+ ++EEM G+ PD +T + +L AC H+GLVD+G+K F
Sbjct: 482 DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF 541
Query: 478 ESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGD 537
+SM TVY + P +HY ++DLL R G S+A +I ++PFK A IW ALLS C+VHG+
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
Query: 538 VELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVE 597
+EL +A +L + +H Y++LSNM A Q +E A VRK + + G++K S++E
Sbjct: 602 MELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIE 661
Query: 598 MNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
M +H FL D SHPEA+A + L+D+ ++ +G
Sbjct: 662 METQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLG 697
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 183/420 (43%), Gaps = 52/420 (12%)
Query: 157 YCVFRDAHNAYKVFEQMPV--RDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEY 214
YC D A VFE+ PV RD V YN MI GF ++ + M+ G +PD +
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 215 TLVTLLSACSSL-EDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC----LELA 269
T ++L+ + + +D++ Q H + G + NALV +Y+KC L A
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGA--GYITSVSNALVSVYSKCASSPSLLHSA 207
Query: 270 ERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER-DVVSWTAMISGYSHAG 328
+V + +WT++++ Y G ++ L + M + +V++ AMISGY + G
Sbjct: 208 RKVFDEILEKDE--RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 329 YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQN 385
+ ++ DE + + CA G L+LG+++H L+ ++H
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH---- 321
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFCK-TSKD----------------------------K 416
F ++V +Y KCG D A +F K +KD +
Sbjct: 322 --FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Query: 417 KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKP 476
K + + +ISGLA +G G+ + LF M+ G P F + +C G G++
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 477 FESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
+ + G + + ++ + + G++ EA + MP ++V W AL++A HG
Sbjct: 440 HAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHG 497
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 154/374 (41%), Gaps = 75/374 (20%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
FT+P ++++CA A LG Q+H ++++ S F N+L+ Y A +FE+
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEK 345
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMR-----------------GF-------- 207
MP +D VS+N +++G+V +G G + + +M+ GF
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 208 ------GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLV--NALVDM 259
G P +Y + +C+ L G+Q H + + +G ++ L NAL+ M
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK----IGFDSSLSAGNALITM 461
Query: 260 YAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTA 319
YAKCG +E AR++F M D VSW A
Sbjct: 462 YAKCGVVE---------------------------------EARQVFRTMPCLDSVSWNA 488
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
+I+ G+ ++PD + ++ L+ C+ G ++ GR+ +
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK-YFDSMETV 547
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAI 439
+ ++D+ + G A V ++ K T ++ +++SG HG + I
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSDAESVI-ESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 440 TLFEEMRLLGLVPD 453
+ +L GL+P+
Sbjct: 607 IAAD--KLFGLIPE 618
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 156/360 (43%), Gaps = 54/360 (15%)
Query: 230 RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSL 289
++ R VHG + G A ++N L+D+Y K L A ++ + + A T++
Sbjct: 31 QLARAVHGNII-TFG-FQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKI--ARTTM 86
Query: 290 VSAYASRGDVEVARRLFDQ--MGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKP 347
VS Y + GD+ +AR +F++ + RD V + AMI+G+SH KP
Sbjct: 87 VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 348 DEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGS----ID 403
D + L+ A L A + + + AA G + A+V +Y+KC S +
Sbjct: 147 DNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 404 TALDVFCKT-SKDKK--TTIL---------------------------YNSIISGLAHHG 433
+A VF + KD++ TT++ YN++ISG + G
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 434 LGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHY 493
+ A+ + M G+ D T+ +++ AC +GL+ GK+ V+ + E +
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ-------VHAYVLRREDF 318
Query: 494 -----GCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQEL 548
+V L + G EA + MP K + V W ALLS G + AKL +E+
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
+ F +KSCA G Q H L+K F S + NAL+ Y A +VF
Sbjct: 418 YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRT 477
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACS--SLEDQR 230
MP D VS+N +I + G ++ V +M GIRPD TL+T+L+ACS L DQ
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQ- 536
Query: 231 VGRQVHG---LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWT 287
GR+ VYR + A L+D+ + G AE V+ + K W
Sbjct: 537 -GRKYFDSMETVYR----IPPGADHYARLIDLLCRSGKFSDAESVIESL-PFKPTAEIWE 590
Query: 288 SLVSAYASRGDVEV----ARRLFDQMGERD 313
+L+S G++E+ A +LF + E D
Sbjct: 591 ALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/659 (28%), Positives = 322/659 (48%), Gaps = 76/659 (11%)
Query: 28 QALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH 87
+ Q A ++ +G +D ++S LI+ + +N+ + + + +P ++ ++++I A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASY-SNYNCFNDADLVLQSIPDPTIYSFSSLIYAL 91
Query: 88 SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
+ + P L K CA +G Q+HC S
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCV---------------------------- 179
FV ++ H Y +A KVF++M +D V
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 180 -------SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
S+N +++GF R+G ++ + + G PD+ T+ ++L + E +G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCG-------CLELAERVVSGVRNGKSVVAA 285
R +HG V ++ G L D + ++A++DMY K G E + +GV N
Sbjct: 272 RLIHGYVIKQ-GLLKDKCV-ISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCN------- 322
Query: 286 WTSLVSAYASRGDVEVARRLFD----QMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXX 341
+ ++ + G V+ A +F+ Q E +VVSWT++I+G + G
Sbjct: 323 --AYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ 380
Query: 342 XXXMKPDEVDVVAALSECARLGALELGR-------RIHLKYAAENWHCGQNGGFTCAVVD 394
+KP+ V + + L C + AL GR R+HL +N H G A++D
Sbjct: 381 VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL---LDNVHVGS------ALID 431
Query: 395 MYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDG 454
MYAKCG I+ + VF K + +NS+++G + HG K +++FE + L PD
Sbjct: 432 MYAKCGRINLSQIVF--NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF 489
Query: 455 VTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLIL 514
++F +LL ACG GL DEG K F+ MS YG+ P++EHY C+V+LLGR G L EAY LI
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 515 NMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDE 574
MPF+ ++ +W ALL++C++ +V+LA++A ++L +E ++ YV+LSN+ A E
Sbjct: 550 EMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTE 609
Query: 575 AASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
S+R ++++G++K PG S++++ ++ LAGDKSHP+ + +I+ ++ G
Sbjct: 610 VDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 257/476 (53%), Gaps = 52/476 (10%)
Query: 166 AYKVFEQM--PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVTLLSA 222
A+KVF ++ P+ + +N +I G+ G + + + +MR G + PD +T L+ A
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 223 CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV 282
+++ D R+G +H +V R G + N+L+ +YA C
Sbjct: 131 VTTMADVRLGETIHSVVIR--SGFGSLIYVQNSLLHLYANC------------------- 169
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
GDV A ++FD+M E+D+V+W ++I+G++ G
Sbjct: 170 --------------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 343 XXMKPDEVDVVAALSECARLGALELGRRIHLKYA----AENWHCGQNGGFTCAVVDMYAK 398
+KPD +V+ LS CA++GAL LG+R+H+ N H ++D+YA+
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN------VLLDLYAR 269
Query: 399 CGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLL-GLVPDGVTF 457
CG ++ A +F + K ++ + S+I GLA +G GK AI LF+ M GL+P +TF
Sbjct: 270 CGRVEEAKTLFDEMVD--KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 458 VALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP 517
V +L AC H G+V EG + F M Y + P++EH+GC+VDLL R G + +AY I +MP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 518 FKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAAS 577
+ N VIWR LL AC VHGD +LA+ A ++L +E +H YV+LSNM A + +
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 578 VRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+RK + G++K PG S VE+ +H+FL GDKSHP++ A L+++ ++S G
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 503
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 207/439 (47%), Gaps = 53/439 (12%)
Query: 25 TIQQALQIQAHMVVTGLH-HDLFLSTALISFFAT--NHRALRHSLRLFSLVTNP-DLFLW 80
+I + QI A + G+ D L LI + + + + ++ ++FS + P ++F+W
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIW 88
Query: 81 NAIIKAHSLSPNH--AFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
N +I+ ++ N AF T+P+L+K+ LG +H +
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTH-TYPFLIKAVTTMADVRLGETIHSVV 147
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
++S F S ++V N+LLH Y D +AYKVF++MP +D V++N +INGF G+ ++
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
+ +M GI+PD +T+V+LLSAC+ + +G++VH VY L N N L+D
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH--VYMIKVGLTRNLHSSNVLLD 265
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWT 318
+YA+CG +E A+ + + + SV +WTSL+ A G + A LF M +
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSV--SWTSLIVGLAVNGFGKEAIELFKYMESTE----- 318
Query: 319 AMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG----RRIHLK 374
+ P E+ V L C+ G ++ G RR+ +
Sbjct: 319 -------------------------GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 353
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
Y E + F C +VD+ A+ G + A + + K+ + +++ +++ HG
Sbjct: 354 YKIE----PRIEHFGC-MVDLLARAGQVKKAYE-YIKSMPMQPNVVIWRTLLGACTVHGD 407
Query: 435 GKYAITLFEEMRLLGLVPD 453
A F +++L L P+
Sbjct: 408 SDLA--EFARIQILQLEPN 424
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 299/578 (51%), Gaps = 55/578 (9%)
Query: 60 RALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLL 119
R L +L+LF ++ + +IK ++ + + T ++
Sbjct: 121 RRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVI 180
Query: 120 KSCANARTPHLGLQLHCHLVKS-----RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
+C+ HLG C +++S + VFV+ LLH YC+ +A K+F++MP
Sbjct: 181 SACS-----HLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 175 VRDCVSYNMMINGFVRAGRA-----------------------GCSMK--------VLGD 203
R+ V++N+M+NG+ +AG GC K +
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG-LVYRELGCLGDNALLVNALVDMYAK 262
M G++P E +V LLSA + G Q+HG +V R C L ++ YA
Sbjct: 296 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYD---FLQATIIHFYAV 352
Query: 263 CGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMIS 322
++LA + + K +A+ +L++ + G VE AR +FDQ ++D+ SW AMIS
Sbjct: 353 SNDIKLALQQFEA--SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMIS 410
Query: 323 GYSHA-GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH--LKYAAEN 379
GY+ + +KPD + +V+ S + LG+LE G+R H L ++
Sbjct: 411 GYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFST-- 468
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL-YNSIISGLAHHGLGKYA 438
N T A++DMYAKCGSI+TAL++F +T +TI +N+II G A HG K A
Sbjct: 469 --IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Query: 439 ITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVD 498
+ L+ +++ L + P+ +TFV +L AC H+GLV+ GK FESM + +G+ P ++HYGC+VD
Sbjct: 527 LDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVD 586
Query: 499 LLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGAR 558
LLG+ G L EA +I MP KA+ +IW LLSA + HG+VE+A+LA EL A++ HG
Sbjct: 587 LLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGC 646
Query: 559 YVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYV 596
VMLSN+ AD + ++ A VR+ + ++ +S V
Sbjct: 647 KVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 203/488 (41%), Gaps = 74/488 (15%)
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYC----------VFRD------ 162
L SCA++ G Q+HC ++KS S+ ++ N++L+ Y VFRD
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 163 ---------------AHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
+A K+F+ MP R CVSY +I G+ + + +M++ +MR
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
GI +E TL T++SACS L R + L + L + L+ MY C CL+
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLK--LEGRVFVSTNLLHMYCLCLCLK 225
Query: 268 LAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYS 325
A ++ + RN + W +++ Y+ G +E A LFDQ+ E+D+VSW MI G
Sbjct: 226 DARKLFDEMPERN----LVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCL 281
Query: 326 HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQN 385
MKP EV +V LS AR G ++H + C
Sbjct: 282 RKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYD- 340
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFCKTSKD-----------------------------K 416
++ YA I AL F + KD
Sbjct: 341 -FLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD 399
Query: 417 KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLV-PDGVTFVALLCACGHSGLVDEGKK 475
K +N++ISG A + A+ LF EM V PD +T V++ A G ++EGK+
Sbjct: 400 KDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKR 459
Query: 476 PFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVI--WRALLSACK 533
+ ++ + P ++D+ + G + A ++ +++ I W A++
Sbjct: 460 AHDYLN-FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSA 518
Query: 534 VHGDVELA 541
HG +LA
Sbjct: 519 THGHAKLA 526
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 119/284 (41%), Gaps = 35/284 (12%)
Query: 213 EYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERV 272
E LV+ L +C+S D GRQ+H V + L N + N++++MYAKC L AE V
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLK--SGLDSNGYICNSVLNMYAKCRLLADAESV 98
Query: 273 VSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXX 332
+ K A++ +V Y + A +LFD M ER VS+T +I GY+
Sbjct: 99 FRD--HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSE 156
Query: 333 XXXXXXXXXXXXMKPDEVDVVAALSECARLGA-------------LELGRRIHLKYAAEN 379
+ +EV + +S C+ LG L+L R+ + +
Sbjct: 157 AMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLH 216
Query: 380 WHC----------------GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYN 423
+C +N +++ Y+K G I+ A ++F + + +K + +
Sbjct: 217 MYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT--EKDIVSWG 274
Query: 424 SIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHS 467
++I G A+ + EM G+ P V V LL A S
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARS 318
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 127/321 (39%), Gaps = 40/321 (12%)
Query: 18 LLASSCRTI--QQALQIQAHMVVTGLHHDLFLSTALISFFAT----------------NH 59
LL++S R++ + LQ+ +V G FL +I F+A +H
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 60 RALRHSL--------------RLFSLVTNPDLFLWNAIIK--AHSLSPNHAFXXXXXXXX 103
A R++L +F + D+F WNA+I A SLSP A
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLAL-HLFREMI 429
Query: 104 XXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDA 163
T + + ++ + G + H +L S + + A++ Y
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSI 489
Query: 164 HNAYKVFEQ---MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLL 220
A +F Q + +N +I G G A ++ + D++ I+P+ T V +L
Sbjct: 490 ETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVL 549
Query: 221 SACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGK 280
SAC +G+ + + G D +VD+ K G LE A+ ++ + K
Sbjct: 550 SACCHAGLVELGKTYFESMKSDHGIEPD-IKHYGCMVDLLGKAGRLEEAKEMIKKM-PVK 607
Query: 281 SVVAAWTSLVSAYASRGDVEV 301
+ V W L+SA + G+VE+
Sbjct: 608 ADVMIWGMLLSASRTHGNVEI 628
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 181/605 (29%), Positives = 309/605 (51%), Gaps = 57/605 (9%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHH--DLFLSTALISFFATNHRALRHSLRLFSLVTNPDLF 78
S R+I++A M+ G + DLF+ ++ IS +A + S R+F ++
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYA-ELGDIESSRRVFDSCVERNIE 283
Query: 79 LWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANA--RTPHLGLQLHC 136
+WN +I + + + YLL + A + + LG Q H
Sbjct: 284 VWNTMIGVY-VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHG 342
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC 196
+ K+ + + N+L+ Y H ++ VF M RD VS+N MI+ FV+ G
Sbjct: 343 FVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDE 402
Query: 197 SMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRE-LGCLGDNALLVNA 255
+ ++ +M+ G + D T+ LLSA S+L ++ +G+Q H + R+ + G N+ L+
Sbjct: 403 GLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLI-- 460
Query: 256 LVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG--ERD 313
DMY+K G + ++++LF+ G ERD
Sbjct: 461 --DMYSKSGL---------------------------------IRISQKLFEGSGYAERD 485
Query: 314 VVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHL 373
+W +MISGY+ G+ ++P+ V V + L C+++G+++LG+++H
Sbjct: 486 QATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH- 544
Query: 374 KYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG 433
++ + QN A+VDMY+K G+I A D+F +T + + ++ Y ++I G HG
Sbjct: 545 GFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE--RNSVTYTTMILGYGQHG 601
Query: 434 LGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHY 493
+G+ AI+LF M+ G+ PD +TFVA+L AC +SGL+DEG K FE M VY + P EHY
Sbjct: 602 MGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHY 661
Query: 494 GCVVDLLGRGGLLSEAYHLILNMPFKAN-AVIWRALLSACKVHGDVELAKLACQELLAVE 552
C+ D+LGR G ++EAY + + + N A +W +LL +CK+HG++ELA+ + L +
Sbjct: 662 CCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERL--AK 719
Query: 553 HDHGARY----VMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAG 608
D G + V+LSNM A+ + VR+ + G++K G S +E+ G ++ F++
Sbjct: 720 FDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSR 779
Query: 609 DKSHP 613
D+ HP
Sbjct: 780 DQEHP 784
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/555 (22%), Positives = 228/555 (41%), Gaps = 97/555 (17%)
Query: 67 RLFSLVTNPDLFLWNAIIKAHSLS--PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCAN 124
+LF + P LWN II + P+ A +T+ LK+CA
Sbjct: 60 QLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAE 119
Query: 125 ARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAY------KVFEQMPVRDC 178
+ G +HCHL++ +S V N+L++ Y +A + + KVF+ M ++
Sbjct: 120 TKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNV 179
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
V++N +I+ +V+ GR + + G M ++P + V + A S + +GL
Sbjct: 180 VAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGL 239
Query: 239 VYRELGCLGD----NALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
+ + LGD + +V++ + MYA+ G
Sbjct: 240 MLK----LGDEYVKDLFVVSSAISMYAELG------------------------------ 265
Query: 295 SRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG-YXXXXXXXXXXXXXXXMKPDEVDVV 353
D+E +RR+FD ER++ W MI Y + DEV +
Sbjct: 266 ---DIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYL 322
Query: 354 AALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVD----MYAKCGSIDTALDVF 409
A S + L +ELGR+ H + ++N+ +V+ MY++CGS+ + VF
Sbjct: 323 LAASAVSALQQVELGRQFH-GFVSKNFR-----ELPIVIVNSLMVMYSRCGSVHKSFGVF 376
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACG---- 465
S ++ + +N++IS +GL + L EM+ G D +T ALL A
Sbjct: 377 L--SMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 466 -------HSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPF 518
H+ L+ +G + FE M++ ++D+ + GL+ + L +
Sbjct: 435 KEIGKQTHAFLIRQGIQ-FEGMNSY------------LIDMYSKSGLIRISQKLFEGSGY 481
Query: 519 -KANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNML--------ADM 569
+ + W +++S +G E L +++L E + V ++++L D+
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKML--EQNIRPNAVTVASILPACSQIGSVDL 539
Query: 570 DQHDEAASVRKAIDN 584
+ S+R+ +D
Sbjct: 540 GKQLHGFSIRQYLDQ 554
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 141/308 (45%), Gaps = 11/308 (3%)
Query: 12 YDRVKALL--ASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLF 69
Y V ALL AS+ R + Q A ++ G+ + +++ LI ++ + +R S +LF
Sbjct: 419 YITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSG-LIRISQKLF 476
Query: 70 --SLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANART 127
S D WN++I ++ + + T +L +C+ +
Sbjct: 477 EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGS 536
Query: 128 PHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMING 187
LG QLH ++ +VFVA+AL+ Y A +F Q R+ V+Y MI G
Sbjct: 537 VDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG 596
Query: 188 FVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSAC--SSLEDQRVGRQVHGLVYRELGC 245
+ + G ++ + M+ GI+PD T V +LSAC S L D+ G ++ + RE+
Sbjct: 597 YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDE--GLKIFEEM-REVYN 653
Query: 246 LGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRL 305
+ ++ + DM + G + A V G+ ++ W SL+ + G++E+A +
Sbjct: 654 IQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETV 713
Query: 306 FDQMGERD 313
+++ + D
Sbjct: 714 SERLAKFD 721
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 161/391 (41%), Gaps = 70/391 (17%)
Query: 166 AYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG--IRPDEYTLVTLLSAC 223
A ++F+ +P V +N +I GF+ ++ M+ D YT + L AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 224 SSLEDQRVGRQVHGLVYRELGCLGDNALLV-NALVDMYAKC----GCLELAERVVSGVRN 278
+ ++ + G+ VH + R CL +++ +V N+L++MY C C E
Sbjct: 118 AETKNLKAGKAVHCHLIR---CLQNSSRVVHNSLMNMYVSCLNAPDCFEY---------- 164
Query: 279 GKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXX 338
+V R++FD M ++VV+W +IS Y G
Sbjct: 165 ---------------------DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFG 203
Query: 339 XXXXXXMKPDE---VDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDM 395
+KP V+V A+S + + + LK E ++ + + M
Sbjct: 204 IMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYV---KDLFVVSSAISM 260
Query: 396 YAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLF-EEMRLLGLVPDG 454
YA+ G I+++ VF S ++ ++N++I + +I LF E + +V D
Sbjct: 261 YAELGDIESSRRVF--DSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE 318
Query: 455 VTFVALLCACGHSGL--VDEGK-------KPFESMSTVYGVNPQMEHYGCVVDLLGRGGL 505
VT+ LL A S L V+ G+ K F + V VN M Y R G
Sbjct: 319 VTY--LLAASAVSALQQVELGRQFHGFVSKNFRELPIVI-VNSLMVMY-------SRCGS 368
Query: 506 LSEAYHLILNMPFKANAVIWRALLSACKVHG 536
+ +++ + L+M + + V W ++SA +G
Sbjct: 369 VHKSFGVFLSMR-ERDVVSWNTMISAFVQNG 398
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/611 (28%), Positives = 303/611 (49%), Gaps = 52/611 (8%)
Query: 28 QALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH 87
+ LQ+ +V GL + +S +LI+ + +R + LF + WN++I +
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN-VRKARILFDKTEVKSVVTWNSMISGY 270
Query: 88 SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
+ + +F ++K CAN + QLHC +VK F
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMP-VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
+ AL+ Y +A ++F+++ V + VS+ MI+GF++ ++ + +M+
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCL 266
G+RP+E+T +L+A + V QV Y +G
Sbjct: 391 KGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG------------------- 431
Query: 267 ELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSH 326
T+L+ AY G VE A ++F + ++D+V+W+AM++GY+
Sbjct: 432 --------------------TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 471
Query: 327 AGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGA-LELGRRIH---LKYAAENWHC 382
G +KP+E + L+ CA A + G++ H +K ++ C
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 531
Query: 383 GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLF 442
+ A++ MYAK G+I++A +VF + + +K + +NS+ISG A HG A+ +F
Sbjct: 532 -----VSSALLTMYAKKGNIESAEEVFKR--QREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 443 EEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGR 502
+EM+ + DGVTF+ + AC H+GLV+EG+K F+ M + P EH C+VDL R
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 503 GGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVML 562
G L +A +I NMP A + IWR +L+AC+VH EL +LA ++++A++ + A YV+L
Sbjct: 645 AGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLL 704
Query: 563 SNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELML 622
SNM A+ E A VRK ++ ++K PG+S++E+ + FLAGD+SHP + L
Sbjct: 705 SNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKL 764
Query: 623 RDINMGVKSIG 633
D++ +K +G
Sbjct: 765 EDLSTRLKDLG 775
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 176/434 (40%), Gaps = 58/434 (13%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
F +LK A G QLHC +K F V V +L+ Y + + KVF++M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQ 234
R+ V++ +I+G+ R + + M+ G +P+ +T L + G Q
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
VH +V + L + N+L+++Y KC
Sbjct: 216 VHTVVVK--NGLDKTIPVSNSLINLYLKC------------------------------- 242
Query: 295 SRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVA 354
G+V AR LFD+ + VV+W +MISGY+ G ++ E +
Sbjct: 243 --GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 355 ALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSK 414
+ CA L L ++H + QN A++ Y+KC ++ AL +F K
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQN--IRTALMVAYSKCTAMLDALRLF-KEIG 357
Query: 415 DKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACG-------HS 467
+ + ++ISG + + A+ LF EM+ G+ P+ T+ +L A H+
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHA 417
Query: 468 GLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRA 527
+V K +E STV ++D + G + EA + + K + V W A
Sbjct: 418 QVV---KTNYERSSTV---------GTALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSA 464
Query: 528 LLSACKVHGDVELA 541
+L+ G+ E A
Sbjct: 465 MLAGYAQTGETEAA 478
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/511 (20%), Positives = 209/511 (40%), Gaps = 54/511 (10%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
Q+ + G D+ + T+L+ + + ++F + ++ W +I ++ +
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSN-FKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
+ FTF L A GLQ+H +VK+ + V+
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
N+L++ Y + A +F++ V+ V++N MI+G+ G ++ + MR +R
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 211 PDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAE 270
E + +++ C++L++ R Q+H V + G L D + AL+ Y+KC + A
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVK-YGFLFDQNIRT-ALMVAYSKCTAMLDAL 350
Query: 271 RVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYX 330
R+ + +VV +WT+++S + E A LF +M + V
Sbjct: 351 RLFKEIGCVGNVV-SWTAMISGFLQNDGKEEAVDLFSEMKRKGV---------------- 393
Query: 331 XXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC 390
+P+E L+ + E +H + N+ G
Sbjct: 394 ---------------RPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVG--T 432
Query: 391 AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL 450
A++D Y K G ++ A VF + D K + ++++++G A G + AI +F E+ G+
Sbjct: 433 ALLDAYVKLGKVEEAAKVF--SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI 490
Query: 451 VPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLL-----GRGGL 505
P+ TF ++L C + K F + + +++ CV L +G +
Sbjct: 491 KPNEFTFSSILNVCAATNASMGQGKQFHG----FAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 506 LSEAYHLILNMPFKANAVIWRALLSACKVHG 536
E+ + + + V W +++S HG
Sbjct: 547 --ESAEEVFKRQREKDLVSWNSMISGYAQHG 575
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 137/303 (45%), Gaps = 39/303 (12%)
Query: 164 HNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSAC 223
+NA+ +F++ P RD SY ++ GF R GR + ++ ++ G+ D ++L
Sbjct: 44 YNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 224 SSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVV 283
++L D+ GRQ+H C C++ G + SV
Sbjct: 104 ATLCDELFGRQLH--------------------------CQCIKF------GFLDDVSV- 130
Query: 284 AAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXX 343
TSLV Y + + R++FD+M ER+VV+WT +ISGY+
Sbjct: 131 --GTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNE 188
Query: 344 XMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSID 403
+P+ AAL A G G ++H + + +++++Y KCG++
Sbjct: 189 GTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG--LDKTIPVSNSLINLYLKCGNVR 246
Query: 404 TALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCA 463
A +F KT + K+ + +NS+ISG A +GL A+ +F MRL + +F +++
Sbjct: 247 KARILFDKT--EVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 464 CGH 466
C +
Sbjct: 305 CAN 307
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 187/460 (40%), Gaps = 47/460 (10%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLV-TNPDL 77
L ++ + ++ Q+ +V G D + TAL+ + + A+ +LRLF + ++
Sbjct: 304 LCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY-SKCTAMLDALRLFKEIGCVGNV 362
Query: 78 FLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCH 137
W A+I + FT+ +L + +P ++H
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP-VISPS---EVHAQ 418
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCS 197
+VK+ + V ALL Y A KVF + +D V+++ M+ G+ + G +
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLE-DQRVGRQVHGLVYRELGCLGDNALLVNAL 256
+K+ G++ GI+P+E+T ++L+ C++ G+Q HG + L + + +AL
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR--LDSSLCVSSAL 536
Query: 257 VDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVS 316
+ MYAK G +E AE V R + + +W S++S YA G A +F +M +R V
Sbjct: 537 LTMYAKKGNIESAEEVFK--RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV-- 592
Query: 317 WTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYA 376
K D V + + C G +E G + +
Sbjct: 593 -----------------------------KMDGVTFIGVFAACTHAGLVEEGEK-YFDIM 622
Query: 377 AENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGK 436
+ +VD+Y++ G ++ A+ V +TI + +I++ H K
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI-WRTILAACRVH--KK 679
Query: 437 YAITLFEEMRLLGLVP-DGVTFVALLCACGHSGLVDEGKK 475
+ +++ + P D +V L SG E K
Sbjct: 680 TELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 267/481 (55%), Gaps = 17/481 (3%)
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM--R 205
F+ ++ F D A ++F Q+ + YN +I + +++ + +
Sbjct: 43 FMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRK 102
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLV--NALVDMYAKC 263
F + PD +T + +C+SL +G+QVHG L G +V NAL+DMY K
Sbjct: 103 SFEL-PDRFTFPFMFKSCASLGSCYLGKQVHG----HLCKFGPRFHVVTENALIDMYMKF 157
Query: 264 GCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISG 323
L A +V + + V +W SL+S YA G ++ A+ LF M ++ +VSWTAMISG
Sbjct: 158 DDLVDAHKVFDEMY--ERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISG 215
Query: 324 YSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCG 383
Y+ G ++PDE+ +++ L CA+LG+LELG+ IHL YA
Sbjct: 216 YTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHL-YAERRGFLK 274
Query: 384 QNGGFTC-AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLF 442
Q G C A+++MY+KCG I A+ +F + + K I ++++ISG A+HG AI F
Sbjct: 275 QTG--VCNALIEMYSKCGVISQAIQLFGQM--EGKDVISWSTMISGYAYHGNAHGAIETF 330
Query: 443 EEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGR 502
EM+ + P+G+TF+ LL AC H G+ EG + F+ M Y + P++EHYGC++D+L R
Sbjct: 331 NEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLAR 390
Query: 503 GGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVML 562
G L A + MP K ++ IW +LLS+C+ G++++A +A L+ +E + YV+L
Sbjct: 391 AGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLL 450
Query: 563 SNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELML 622
+N+ AD+ + ++ + +RK I N ++K PG S +E+N + +F++GD S P ++L
Sbjct: 451 ANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVL 510
Query: 623 R 623
+
Sbjct: 511 Q 511
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 202/429 (47%), Gaps = 70/429 (16%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
+I A +++ GL F+ T ++ F + ++ RLF+ V+NP++FL+N+II+A++ +
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDF-CDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 91 PNHA-FXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFV 149
+ FTFP++ KSCA+ + +LG Q+H HL K HV
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 150 ANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRA--------------- 194
NAL+ Y F D +A+KVF++M RD +S+N +++G+ R G+
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 195 -------------GC---SMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
GC +M +M+ GI PDE +L+++L +C+ L +G+ +H
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH-- 264
Query: 239 VYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGD 298
+Y E + NAL++MY+KCG + A ++ G GK V+ +W++++S YA G+
Sbjct: 265 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF-GQMEGKDVI-SWSTMISGYAYHGN 322
Query: 299 VEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSE 358
A F++M V KP+ + + LS
Sbjct: 323 AHGAIETFNEMQRAKV-------------------------------KPNGITFLGLLSA 351
Query: 359 CARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT 418
C+ +G + G R + +++ ++D+ A+ G ++ A+++ KT K
Sbjct: 352 CSHVGMWQEGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEI-TKTMPMKPD 409
Query: 419 TILYNSIIS 427
+ ++ S++S
Sbjct: 410 SKIWGSLLS 418
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 271/518 (52%), Gaps = 50/518 (9%)
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHN--AYKVFEQMPVR 176
+KSC + L LHC +VKS + H F+ + L+ C R H+ A K+F++MP R
Sbjct: 41 VKSCVSIELCRL---LHCKVVKSVSYRHGFIGDQLVG--CYLRLGHDVCAEKLFDEMPER 95
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDM--RGFGIRPDEYTLVTLLSACSSLEDQRVGRQ 234
D VS+N +I+G+ G G +VL M G RP+E T ++++SAC + GR
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
+HGLV + G L + +VNA ++ Y K G
Sbjct: 156 IHGLVMK-FGVL-EEVKVVNAFINWYGKTG------------------------------ 183
Query: 295 SRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVA 354
D+ + +LF+ + +++VSW MI + G +PD+ +A
Sbjct: 184 ---DLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLA 240
Query: 355 ALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK-TS 413
L C +G + L + IH + N T A++D+Y+K G ++ + VF + TS
Sbjct: 241 VLRSCEDMGVVRLAQGIHGLIMFGGF--SGNKCITTALLDLYSKLGRLEDSSTVFHEITS 298
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
D ++ + ++++ A HG G+ AI FE M G+ PD VTF LL AC HSGLV+EG
Sbjct: 299 PD---SMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEG 355
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
K FE+MS Y ++P+++HY C+VDLLGR GLL +AY LI MP + ++ +W ALL AC+
Sbjct: 356 KHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACR 415
Query: 534 VHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGW 593
V+ D +L A + L +E G YVMLSN+ + +A+ +R + G+ + G
Sbjct: 416 VYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGC 475
Query: 594 SYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKS 631
SY+E +HKF+ GD SHPE++ + L++I +KS
Sbjct: 476 SYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKS 513
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 10/268 (3%)
Query: 67 RLFSLVTNPDLFLWNAIIKAHSLSP--NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCAN 124
+LF + DL WN++I +S F TF ++ +C
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 125 ARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMM 184
+ G +H ++K V V NA +++Y D ++ K+FE + +++ VS+N M
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTM 206
Query: 185 INGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELG 244
I ++ G A + R G PD+ T + +L +C + R+ + +HGL+ G
Sbjct: 207 IVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM--FG 264
Query: 245 CLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARR 304
N + AL+D+Y+K G LE + V + + S+ AWT++++AYA+ G A +
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSM--AWTAMLAAYATHGFGRDAIK 322
Query: 305 LFDQMG----ERDVVSWTAMISGYSHAG 328
F+ M D V++T +++ SH+G
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSG 350
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/588 (30%), Positives = 290/588 (49%), Gaps = 48/588 (8%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
QI +V GLH+D ++ T+L+S + + + + +FS V + L +WNA++ A++ +
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMY-SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
FT ++ C+ + G +H L K S +
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF--G 208
+ALL Y +AY VF+ M +D V++ +I+G + G+ ++KV GDM+
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
++PD + ++ +AC+ LE R G QVHG + + L N + ++L+D+Y+KCG E+
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL--NVFVGSSLIDLYSKCGLPEM 529
Query: 269 AERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG 328
A ++F M ++V+W +MIS YS
Sbjct: 530 ---------------------------------ALKVFTSMSTENMVAWNSMISCYSRNN 556
Query: 329 YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQN 385
+ PD V + + L + +L G+ +H L+ + +N
Sbjct: 557 LPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKN 616
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM 445
A++DMY KCG A ++F K K+ I +N +I G HG A++LF+EM
Sbjct: 617 -----ALIDMYVKCGFSKYAENIFKKM--QHKSLITWNLMIYGYGSHGDCITALSLFDEM 669
Query: 446 RLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGL 505
+ G PD VTF++L+ AC HSG V+EGK FE M YG+ P MEHY +VDLLGR GL
Sbjct: 670 KKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGL 729
Query: 506 LSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNM 565
L EAY I MP +A++ IW LLSA + H +VEL L+ ++LL +E + G+ YV L N+
Sbjct: 730 LEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINL 789
Query: 566 LADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHP 613
+ +EAA + + G+ K PG S++E++ + F +G S P
Sbjct: 790 YMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSP 837
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 205/511 (40%), Gaps = 39/511 (7%)
Query: 27 QQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKA 86
++ QI M+ L D FL TALI + ++ + ++ LWN +I
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 87 HSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSH 146
S +F L +C+ + G Q+HC +VK H+
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 147 VFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
+V +LL Y A VF + + +N M+ + ++ + G MR
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCL 266
+ PD +TL ++S CS L G+ VH +++ + + + +AL+ +Y+KCGC
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR--PIQSTSTIESALLTLYSKCGCD 424
Query: 267 ELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSH 326
A V + V AW SL+S G + A ++F M + D
Sbjct: 425 PDAYLVFKSMEEKDMV--AWGSLISGLCKNGKFKEALKVFGDMKDDD------------- 469
Query: 327 AGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNG 386
+KPD + + + CA L AL G ++H
Sbjct: 470 ----------------DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFV 513
Query: 387 GFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR 446
G +++D+Y+KCG + AL VF TS + + +NS+IS + + L + +I LF M
Sbjct: 514 G--SSLIDLYSKCGLPEMALKVF--TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 447 LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLL 506
G+ PD V+ ++L A + + +GK + G+ ++D+ + G
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKS-LHGYTLRLGIPSDTHLKNALIDMYVKCGFS 628
Query: 507 SEAYHLILNMPFKANAVIWRALLSACKVHGD 537
A ++ M K+ + W ++ HGD
Sbjct: 629 KYAENIFKKMQHKS-LITWNLMIYGYGSHGD 658
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 195/458 (42%), Gaps = 83/458 (18%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFY--CVFRDAHNAYKVF 170
FTFP LLK+C+ G +H +V + F+A +L++ Y C F D A +VF
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDY--AVQVF 118
Query: 171 E-------QMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA- 222
+ + RD +N MI+G+ + R + M FG+RPD ++L ++S
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178
Query: 223 CSSLEDQR-VGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKS 281
C +R G+Q+HG + R L ++ L AL+DMY K G
Sbjct: 179 CKEGNFRREEGKQIHGFMLRN--SLDTDSFLKTALIDMYFKFGL---------------- 220
Query: 282 VVAAWTSLVSAYASRGDVEVARRLFDQMGER-DVVSWTAMISGYSHAGYXXXXXXXXXXX 340
+ AW R+F ++ ++ +VV W MI G+ +G
Sbjct: 221 SIDAW-----------------RVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLA 263
Query: 341 XXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC-AVVDMYAKC 399
+K AL C++ GR+IH H N + C +++ MY+KC
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH---NDPYVCTSLLSMYSKC 320
Query: 400 GSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVA 459
G + A VF DK+ I +N++++ A + G A+ LF MR ++PD T
Sbjct: 321 GMVGEAETVF-SCVVDKRLEI-WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 460 LLCACGHSGLVDEG--------KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYH 511
++ C GL + G K+P +S ST+ ++ L + G +AY
Sbjct: 379 VISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESA---------LLTLYSKCGCDPDAYL 429
Query: 512 LILNMPFKANAVIWRALLS----------ACKVHGDVE 539
+ +M K + V W +L+S A KV GD++
Sbjct: 430 VFKSMEEK-DMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 141/309 (45%), Gaps = 8/309 (2%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
++ LQ+ M+ TGL ++F+ ++LI ++ +L++F+ ++ ++ WN++
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLP-EMALKVFTSMSTENMVAWNSM 548
Query: 84 IKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
I +S + + +L + ++ + G LH + ++
Sbjct: 549 ISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGI 608
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
S + NAL+ Y + A +F++M + +++N+MI G+ G ++ + +
Sbjct: 609 PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDE 668
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKC 263
M+ G PD+ T ++L+SAC+ G+ + + ++ G + N +VD+ +
Sbjct: 669 MKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYAN-MVDLLGRA 727
Query: 264 GCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEV----ARRLFDQMGERDVVSWTA 319
G LE A + + ++ + W L+SA + +VE+ A +L ER ++
Sbjct: 728 GLLEEAYSFIKAMPI-EADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERG-STYVQ 785
Query: 320 MISGYSHAG 328
+I+ Y AG
Sbjct: 786 LINLYMEAG 794
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 171/614 (27%), Positives = 286/614 (46%), Gaps = 50/614 (8%)
Query: 25 TIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAII 84
T+ + Q+ A+ G + + AL++ +A + +L F ++ LWN ++
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYA-KCADIETALDYFLETEVENVVLWNVML 462
Query: 85 KAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFH 144
A+ L + +T+P +LK+C LG Q+H ++K+ F
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 145 SHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM 204
+ +V + L+ Y A+ + + +D VS+ MI G+ + ++ M
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 205 RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCG 264
GIR DE L +SAC+ L+ + G+Q+H + + NALV +Y++CG
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC--VSGFSSDLPFQNALVTLYSRCG 640
Query: 265 CLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGY 324
+E + F+Q D ++W A++SG+
Sbjct: 641 ---------------------------------KIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 325 SHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH-----LKYAAEN 379
+G + + +A+ + ++ G+++H Y +E
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAI 439
C A++ MYAKCGSI A F + S K + +N+II+ + HG G A+
Sbjct: 728 EVCN-------ALISMYAKCGSISDAEKQFLEVST--KNEVSWNAIINAYSKHGFGSEAL 778
Query: 440 TLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDL 499
F++M + P+ VT V +L AC H GLVD+G FESM++ YG++P+ EHY CVVD+
Sbjct: 779 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 838
Query: 500 LGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARY 559
L R GLLS A I MP K +A++WR LLSAC VH ++E+ + A LL +E + A Y
Sbjct: 839 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATY 898
Query: 560 VMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATE 619
V+LSN+ A + D R+ + G++K PG S++E+ ++H F GD++HP A
Sbjct: 899 VLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Query: 620 LMLRDINMGVKSIG 633
+D+ IG
Sbjct: 959 EYFQDLTKRASEIG 972
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 225/514 (43%), Gaps = 48/514 (9%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
QI A ++ GL + LI ++ N + + R+F + D W A+I S +
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNG-FVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
A + F +L +C + +G QLH ++K F S +V
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
NAL+ Y + +A +F M RD V+YN +ING + G +M++ M G+
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 211 PDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAE 270
PD TL +L+ ACS+ G+Q+H + LG +N + AL+++YAKC +E A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTK-LGFASNNK-IEGALLNLYAKCADIETAL 444
Query: 271 R--VVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG 328
+ + V N V W ++ AY D+ + R+F QM ++V
Sbjct: 445 DYFLETEVEN----VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV------------- 487
Query: 329 YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGF 388
P++ + L C RLG LELG +IH + N+ Q +
Sbjct: 488 ------------------PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF---QLNAY 526
Query: 389 TCAV-VDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRL 447
C+V +DMYAK G +DTA D+ + + K + + ++I+G + A+T F +M
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFA--GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Query: 448 LGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLS 507
G+ D V + AC + EG++ + + V G + + +V L R G +
Sbjct: 585 RGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 508 EAYHLILNMPFKANAVIWRALLSACKVHGDVELA 541
E+Y L + + W AL+S + G+ E A
Sbjct: 644 ESY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 186/427 (43%), Gaps = 57/427 (13%)
Query: 114 TFPYLLKSCANAR-TPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
T +LL+ C + G +LH ++K S+ ++ L FY D + A+KVF++
Sbjct: 86 TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 145
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSAC---SSLEDQ 229
MP R ++N MI G + M + P+E T +L AC S D
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFD- 204
Query: 230 RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSL 289
V Q+H + + L D+ ++ N L+D+Y++ G ++LA RV G+R
Sbjct: 205 -VVEQIHARILYQ--GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR------------ 249
Query: 290 VSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE 349
+D SW AMISG S + P
Sbjct: 250 ---------------------LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 288
Query: 350 VDVVAALSECARLGALELGRRIH-----LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDT 404
+ LS C ++ +LE+G ++H L ++++ + C A+V +Y G++ +
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN-------ALVSLYFHLGNLIS 341
Query: 405 ALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCAC 464
A +F S ++ + YN++I+GL+ G G+ A+ LF+ M L GL PD T +L+ AC
Sbjct: 342 AEHIFSNMS--QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 465 GHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVI 524
G + G++ + +T G + G +++L + + A L + N V+
Sbjct: 400 SADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVL 457
Query: 525 WRALLSA 531
W +L A
Sbjct: 458 WNVMLVA 464
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 117/285 (41%), Gaps = 13/285 (4%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
+ +++ QI A V+G DL AL++ ++ + + S F D WNA+
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK-IEESYLAFEQTEAGDNIAWNAL 663
Query: 84 IKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
+ S N+ FTF +K+ + G Q+H + K+ +
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 723
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
S V NAL+ Y +A K F ++ ++ VS+N +IN + + G ++
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ 783
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVY-----RELGCLGDNALLVNALVD 258
M +RP+ TLV +LSACS +G G+ Y E G L +VD
Sbjct: 784 MIHSNVRPNHVTLVGVLSACS-----HIGLVDKGIAYFESMNSEYG-LSPKPEHYVCVVD 837
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVAR 303
M + G L A+ + + K W +L+SA ++E+
Sbjct: 838 MLTRAGLLSRAKEFIQEMPI-KPDALVWRTLLSACVVHKNMEIGE 881
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSAC----SSLEDQRVGRQVHGLVYRELGCLGDNALLVN 254
K + + GIRP+ TL LL C SL++ GR++H + + LG L N L
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDE---GRKLHSQILK-LG-LDSNGCLSE 124
Query: 255 ALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV 314
L D Y +GD+ A ++FD+M ER +
Sbjct: 125 KLFDFYL---------------------------------FKGDLYGAFKVFDEMPERTI 151
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG--ALELGRRIH 372
+W MI + + P+E L C R G A ++ +IH
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIH 210
Query: 373 LKYAAENWHCGQNGGFTC-AVVDMYAKCGSIDTALDVFCKTS-KDKKTTILYNSIISGLA 430
+ + ++ C ++D+Y++ G +D A VF KD + + ++ISGL+
Sbjct: 211 ARILYQGL---RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV---AMISGLS 264
Query: 431 HHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQM 490
+ AI LF +M +LG++P F ++L AC ++ G++ + G +
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ-LHGLVLKLGFSSDT 323
Query: 491 EHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA 531
+V L G L A H+ NM + +AV + L++
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLING 363
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 188/656 (28%), Positives = 305/656 (46%), Gaps = 81/656 (12%)
Query: 9 SASYDRVKALLASSCR--TIQQALQIQAHMVVT-GLHHDLFLSTALISFFATNHRALRHS 65
S+S +K L+ + R + QA Q+ A + T L H S +++ TN + L +
Sbjct: 2 SSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSH---TSASIVISIYTNLKLLHEA 58
Query: 66 LRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANA 125
L LF + +P + W ++I+ + + FP +LKSC
Sbjct: 59 LLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMM 118
Query: 126 RTPHLGLQLHCHLVKSRFHSHVFVANALLHFYC-------------VFRDA--------- 163
G +H +V+ ++ NAL++ Y VF +
Sbjct: 119 MDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGD 178
Query: 164 --------------HNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGI 209
+ +VFE MP +D VSYN +I G+ ++G +++++ +M +
Sbjct: 179 EDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 238
Query: 210 RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELA 269
+PD +TL ++L S D G+++HG V R+
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK--------------------------- 271
Query: 270 ERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY 329
G+ S V +SLV YA +E + R+F ++ RD +SW ++++GY G
Sbjct: 272 -----GI---DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 330 XXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT 389
+KP V + + CA L L LG+++H + G N
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF--GSNIFIA 381
Query: 390 CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG 449
A+VDMY+KCG+I A +F + + + + + +II G A HG G A++LFEEM+ G
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVS--WTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 450 LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA 509
+ P+ V FVA+L AC H GLVDE F SM+ VYG+N ++EHY V DLLGR G L EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 510 YHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADM 569
Y+ I M + +W LLS+C VH ++ELA+ +++ V+ ++ YV++ NM A
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559
Query: 570 DQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDI 625
+ E A +R + G++K P S++EM H F++GD+SHP L+ +
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAV 615
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 275 bits (703), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 266/497 (53%), Gaps = 17/497 (3%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG 192
QLH H +++ V LL + + A K+F+ YN +I +
Sbjct: 6 QLHAHCLRT----GVDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHH 61
Query: 193 RAGCSMKVLGDMRGF-GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNAL 251
+ S+ VL ++ F G+RP +T + +A +S R R +H +R ++
Sbjct: 62 QPHESI-VLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFR--SGFESDSF 118
Query: 252 LVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE 311
L+ YAK G L A RV + K V W ++++ Y RGD++ A LFD M
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEM--SKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 312 RDVVSWTAMISGYSHAG-YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR 370
++V SWT +ISG+S G Y +KP+ + VV+ L CA LG LE+GRR
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 371 IHLKYAAENWHCGQNGGFTC-AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGL 429
+ YA EN + + C A ++MY+KCG ID A +F + +++ +NS+I L
Sbjct: 237 LE-GYARENGFF--DNIYVCNATIEMYSKCGMIDVAKRLF-EELGNQRNLCSWNSMIGSL 292
Query: 430 AHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQ 489
A HG A+TLF +M G PD VTFV LL AC H G+V +G++ F+SM V+ ++P+
Sbjct: 293 ATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPK 352
Query: 490 MEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELL 549
+EHYGC++DLLGR G L EAY LI MP K +AV+W LL AC HG+VE+A++A + L
Sbjct: 353 LEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALF 412
Query: 550 AVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSY-VEMNGALHKFLAG 608
+E + V++SN+ A ++ D +RK + + K G+SY VE+ +HKF
Sbjct: 413 KLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVE 472
Query: 609 DKSHPEAKATELMLRDI 625
DKSHP + +L +I
Sbjct: 473 DKSHPRSYEIYQVLEEI 489
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 151/338 (44%), Gaps = 52/338 (15%)
Query: 31 QIQAHMVVTGLHH--DLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS 88
Q+ AH + TG+ DL LI L ++ +LF N FL+N +I+A+
Sbjct: 6 QLHAHCLRTGVDETKDLLQRLLLIP-------NLVYARKLFDHHQNSCTFLYNKLIQAYY 58
Query: 89 L--SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSH 146
+ P+ + F F + + ++ P L L LH +S F S
Sbjct: 59 VHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARP-LRL-LHSQFFRSGFESD 116
Query: 147 VFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM-- 204
F L+ Y A +VF++M RD +N MI G+ R G +M++ M
Sbjct: 117 SFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 205 ----------RGF--------------------GIRPDEYTLVTLLSACSSLEDQRVGRQ 234
GF ++P+ T+V++L AC++L + +GR+
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
+ G RE G DN + NA ++MY+KCG +++A+R+ + N ++ + +W S++ + A
Sbjct: 237 LEGYA-RENGFF-DNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN-LCSWNSMIGSLA 293
Query: 295 SRGDVEVARRLFDQM---GER-DVVSWTAMISGYSHAG 328
+ G + A LF QM GE+ D V++ ++ H G
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGG 331
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/586 (30%), Positives = 297/586 (50%), Gaps = 26/586 (4%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
Q+ AH + + D + TA + +A ++ + LF N + +NA+I +S
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDN-MQDAQILFDNSENLNRQSYNAMITGYS-Q 359
Query: 91 PNHAFXXXXXX-XXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFV 149
H F + + ++CA + GLQ++ +KS V V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 150 ANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGI 209
ANA + Y + A++VF++M RD VS+N +I + G+ ++ + M I
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 210 RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELA 269
PDE+T ++L AC+ G ++H + + + N+ + +L+DMY+KCG +E A
Sbjct: 480 EPDEFTFGSILKACTG-GSLGYGMEIHSSIVK--SGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 270 ERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY 329
E++ S +V G +E ++ ++ + VSW ++ISGY
Sbjct: 537 EKIHSRFFQRANV-------------SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 330 XXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT 389
+ PD+ L CA L + LG++IH + + Q+ +
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL---QSDVYI 640
Query: 390 CA-VVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLL 448
C+ +VDMY+KCG + + +F K+ + + + +N++I G AHHG G+ AI LFE M L
Sbjct: 641 CSTLVDMYSKCGDLHDSRLMFEKSLR--RDFVTWNAMICGYAHHGKGEEAIQLFERMILE 698
Query: 449 GLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSE 508
+ P+ VTF+++L AC H GL+D+G + F M YG++PQ+ HY +VD+LG+ G +
Sbjct: 699 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKR 758
Query: 509 AYHLILNMPFKANAVIWRALLSACKVH-GDVELAKLACQELLAVEHDHGARYVMLSNMLA 567
A LI MPF+A+ VIWR LL C +H +VE+A+ A LL ++ + Y +LSN+ A
Sbjct: 759 ALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYA 818
Query: 568 DMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHP 613
D ++ + +R+ + ++K PG S+VE+ LH FL GDK+HP
Sbjct: 819 DAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 864
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 204/460 (44%), Gaps = 84/460 (18%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
F ++ K CA LG Q H H++ S F FV N LL Y RD +A VF++M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 174 P-------------------------------VRDCVSYNMMINGFVRAGRAGCSMKVLG 202
P VRD VS+N M++G+++ G + S++V
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 203 DMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAK 262
DM GI D T +L CS LED +G Q+HG+V R +GC D + +AL+DMYAK
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR-VGCDTD-VVAASALLDMYAK 227
Query: 263 CGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMIS 322
+ RV G+ SV +W+++++ + +A + F +M + + +
Sbjct: 228 GKRFVESLRVFQGIPEKNSV--SWSAIIAGCVQNNLLSLALKFFKEMQKVN--------A 277
Query: 323 GYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHC 382
G S + Y + L CA L L LG ++H ++
Sbjct: 278 GVSQSIY-----------------------ASVLRSCAALSELRLGGQLHAHALKSDF-- 312
Query: 383 GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLF 442
+G A +DMYAKC ++ A +F + + + YN++I+G + G A+ LF
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS--YNAMITGYSQEEHGFKALLLF 370
Query: 443 EEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYG--VNPQMEHYGCV---- 496
+ GL D ++ + AC + EG + +YG + + CV
Sbjct: 371 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ-------IYGLAIKSSLSLDVCVANAA 423
Query: 497 VDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
+D+ G+ L+EA+ + M + +AV W A+++A + +G
Sbjct: 424 IDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 117/524 (22%), Positives = 206/524 (39%), Gaps = 101/524 (19%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
Q AHM+++G F+ L+ + TN R + +F + D+ WN +I +S S
Sbjct: 69 QAHAHMIISGFRPTTFVLNCLLQVY-TNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 91 -----PNHAFXXXXXXXXXXXXXXXXXF--------------------------TFPYLL 119
N F + TF +L
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 120 KSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCV 179
K C+ LG+Q+H +V+ + V A+ALL Y + + +VF+ +P ++ V
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 180 SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLV 239
S++ +I G V+ ++K +M+ + ++L +C++L + R+G Q+H
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHA 307
Query: 240 YRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDV 299
+ + ++ A +DMYAKC ++
Sbjct: 308 LK--SDFAADGIVRTATLDMYAKC---------------------------------DNM 332
Query: 300 EVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSEC 359
+ A+ LFD + S+ AMI+GYS + + DE+ + C
Sbjct: 333 QDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC 392
Query: 360 ARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDK 416
A + L G +I+ +K + C N A +DMY KC ++ A VF + +
Sbjct: 393 ALVKGLSEGLQIYGLAIKSSLSLDVCVAN-----AAIDMYGKCQALAEAFRVFDEMR--R 445
Query: 417 KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACG----------H 466
+ + +N+II+ +G G + LF M + PD TF ++L AC H
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIH 505
Query: 467 SGLVDEGKKPFESMSTVYGVNPQMEHYGC-VVDLLGRGGLLSEA 509
S +V G S S+V GC ++D+ + G++ EA
Sbjct: 506 SSIVKSG---MASNSSV----------GCSLIDMYSKCGMIEEA 536
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/463 (33%), Positives = 254/463 (54%), Gaps = 14/463 (3%)
Query: 172 QMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLED--Q 229
Q VS+ IN R GR + K DM G+ P+ T + LLS C +
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 230 RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSL 289
+G +HG + LG ++ ++ A++ MY+K G + A V + + SV W ++
Sbjct: 90 ALGDLLHGYACK-LGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVT--WNTM 146
Query: 290 VSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE 349
+ Y G V+ A ++FD+M ERD++SWTAMI+G+ GY +KPD
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 350 VDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
V ++AAL+ C LGAL G +H ++++ N + +++D+Y +CG ++ A VF
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFK--NNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+ +K+T + +NS+I G A +G ++ F +M+ G PD VTF L AC H GL
Sbjct: 265 --YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL 322
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
V+EG + F+ M Y ++P++EHYGC+VDL R G L +A L+ +MP K N V+ +LL
Sbjct: 323 VEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLL 382
Query: 530 SACKVHG-DVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQ 588
+AC HG ++ LA+ + L + + YV+LSNM A + + A+ +R+ + +G++
Sbjct: 383 AACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 442
Query: 589 KPPGWSYVEMNGALHKFLAGDKSHPEA----KATELMLRDINM 627
K PG+S +E++ +H F+AGD +H E + EL+ D+ +
Sbjct: 443 KQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRL 485
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 133/283 (46%), Gaps = 37/283 (13%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
N ++ Y NA K+F++MP RD +S+ MINGFV+ G ++ +M+ G++
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 211 PDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAE 270
PD ++ L+AC++L G VH V + +N + N+L+D+Y +CGC+E A
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQ--DFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 271 RVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYX 330
+V + K V +W S++ +A+ G+ + F +M E+
Sbjct: 262 QVFYNME--KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG----------------- 302
Query: 331 XXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC 390
KPD V AL+ C+ +G +E G R + + ++
Sbjct: 303 --------------FKPDAVTFTGALTACSHVGLVEEGLR-YFQIMKCDYRISPRIEHYG 347
Query: 391 AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG 433
+VD+Y++ G ++ AL + ++ K ++ S+++ ++HG
Sbjct: 348 CLVDLYSRAGRLEDALKL-VQSMPMKPNEVVIGSLLAACSNHG 389
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
L +C N GL +H +++ F ++V V+N+L+ YC A +VF M R
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
VS+N +I GF G A S+ M+ G +PD T L+ACS VG GL
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS-----HVGLVEEGL 327
Query: 239 VYRE-LGC---LGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
Y + + C + LVD+Y++ G LE A ++V + + V SL++A +
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVI-GSLLAACS 386
Query: 295 SRG-DVEVARRLFDQMGERDVVS 316
+ G ++ +A RL + + +V S
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKS 409
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 190/619 (30%), Positives = 297/619 (47%), Gaps = 49/619 (7%)
Query: 18 LLASSCRTIQQALQIQAHMVVTGLHHDLFL--STALISFFATNHRALRHSLRLFSLVTNP 75
+LA++ + AL Q H + L DL L S +LI+ + R + +F ++
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC-KLRKFGFARTVFDNMSER 379
Query: 76 DLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCAN-ARTPHLGLQL 134
DL WN++I + + +T +LK+ ++ L Q+
Sbjct: 380 DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQV 439
Query: 135 HCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRA 194
H H +K S FV+ AL+ Y R A +FE+ D V++N M+ G+ ++
Sbjct: 440 HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDG 498
Query: 195 GCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN 254
++K+ M G R D++TL T+ C L G+QVH + L + + +
Sbjct: 499 HKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSS 556
Query: 255 ALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV 314
++DMY KCG D+ A+ FD + D
Sbjct: 557 GILDMYVKCG---------------------------------DMSAAQFAFDSIPVPDD 583
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLK 374
V+WT MISG G + PDE + + L ALE GR+IH
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL-YNSIISGLAHHG 433
A +C + ++VDMYAKCGSID D +C + + I +N+++ GLA HG
Sbjct: 644 --ALKLNCTNDPFVGTSLVDMYAKCGSID---DAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 434 LGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHY 493
GK + LF++M+ LG+ PD VTF+ +L AC HSGLV E K SM YG+ P++EHY
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 494 GCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEH 553
C+ D LGR GL+ +A +LI +M +A+A ++R LL+AC+V GD E K +LL +E
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEP 818
Query: 554 DHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHP 613
+ YV+LSNM A + DE R + ++K PG+S++E+ +H F+ D+S+
Sbjct: 819 LDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSN- 877
Query: 614 EAKATELMLRDINMGVKSI 632
+ TEL+ R + ++ I
Sbjct: 878 --RQTELIYRKVKDMIRDI 894
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 219/538 (40%), Gaps = 52/538 (9%)
Query: 46 FLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS-----PNHAFXXXXX 100
FL LIS + + +L ++ R+F + + DL WN+I+ A++ S N
Sbjct: 75 FLINNLISMY-SKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF 133
Query: 101 XXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVF 160
T +LK C ++ H + K FVA AL++ Y F
Sbjct: 134 RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKF 193
Query: 161 RDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLL 220
+FE+MP RD V +N+M+ ++ G ++ + G+ P+E TL L
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL- 252
Query: 221 SACSSLEDQRVGR-----------QVHGLVYRELGCL-----GDNALLVNALVDMY---A 261
A S +D G+ V +++R G G + L+ DM
Sbjct: 253 -ARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDV 311
Query: 262 KCG----CLELAERV-VSGVRNGKSV------------VAAWTSLVSAYASRGDVEVARR 304
+C L LA V V + G+ V + SL++ Y AR
Sbjct: 312 ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFART 371
Query: 305 LFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARL-G 363
+FD M ERD++SW ++I+G + G +KPD+ + + L + L
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE 431
Query: 364 ALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYN 423
L L +++H+ A + + + A++D Y++ + A +F + + D + +N
Sbjct: 432 GLSLSKQVHVH--AIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD---LVAWN 486
Query: 424 SIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTV 483
++++G G + LF M G D T + CG +++GK+ + +
Sbjct: 487 AMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ-VHAYAIK 545
Query: 484 YGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA 541
G + + ++D+ + G +S A ++P + V W ++S C +G+ E A
Sbjct: 546 SGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERA 602
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 197/618 (31%), Positives = 300/618 (48%), Gaps = 54/618 (8%)
Query: 26 IQQALQIQAHMVVTGLHHDLF-LSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAII 84
+++ ++ H++ TGL + + L++ +A ++ + R+F +T+ D WN++I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG-SIADARRVFYFMTDKDSVSWNSMI 387
Query: 85 KAHSLSPNHAFXXXXXXXXXXXX--XXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSR 142
L N F FT L SCA+ + LG Q+H +K
Sbjct: 388 TG--LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 143 FHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKV-- 200
+V V+NAL+ Y + K+F MP D VS+N +I R+ R+ V
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 201 LGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMY 260
L R G + + T ++LSA SSL +G+Q+HGL + + D A NAL+ Y
Sbjct: 506 LNAQRA-GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN--NIADEATTENALIACY 562
Query: 261 AKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER-DVVSWTA 319
KCG ++ E++ F +M ER D V+W +
Sbjct: 563 GKCGEMDGCEKI---------------------------------FSRMAERRDNVTWNS 589
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
MISGY H + D LS A + LE G +H A
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH---ACSV 646
Query: 380 WHCGQNGGFT-CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
C ++ A+VDMY+KCG +D AL F + + + +NS+ISG A HG G+ A
Sbjct: 647 RACLESDVVVGSALVDMYSKCGRLDYALRFF--NTMPVRNSYSWNSMISGYARHGQGEEA 704
Query: 439 ITLFEEMRLLGLVP-DGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
+ LFE M+L G P D VTFV +L AC H+GL++EG K FESMS YG+ P++EH+ C+
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 764
Query: 498 DLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA-CKVHG-DVELAKLACQELLAVEHDH 555
D+LGR G L + I MP K N +IWR +L A C+ +G EL K A + L +E ++
Sbjct: 765 DVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 824
Query: 556 GARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEA 615
YV+L NM A + ++ RK + + ++K G+S+V M +H F+AGDKSHP+A
Sbjct: 825 AVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDA 884
Query: 616 KATELMLRDINMGVKSIG 633
L+++N ++ G
Sbjct: 885 DVIYKKLKELNRKMRDAG 902
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/510 (22%), Positives = 204/510 (40%), Gaps = 50/510 (9%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
QI M D +S LIS + ++ ++L F + + WN+II +S +
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGL--QLHCHLVKSRFHSHVF 148
+ +TF L+ + + P + L Q+ C + KS + +F
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG-F 207
V + L+ + A KVF QM R+ V+ N ++ G VR + K+ DM
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304
Query: 208 GIRPDEYTLVTLLSACSSLEDQ---RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCG 264
+ P+ Y ++ SL ++ + GR+VHG V G + + N LV+MYAKCG
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVI-TTGLVDFMVGIGNGLVNMYAKCG 363
Query: 265 CLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGY 324
+ A RV F M ++D VSW +MI+G
Sbjct: 364 SIADARRV---------------------------------FYFMTDKDSVSWNSMITGL 390
Query: 325 SHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCG- 383
G + P ++++LS CA L +LG++IH E+ G
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH----GESLKLGI 446
Query: 384 -QNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLG-KYAITL 441
N + A++ +YA+ G ++ +F +S + + +NSII LA A+
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIF--SSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 442 FEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLG 501
F + G + +TF ++L A + GK+ ++ + + ++ G
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALKNNIADEATTENALIACYG 563
Query: 502 RGGLLSEAYHLILNMPFKANAVIWRALLSA 531
+ G + + M + + V W +++S
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 213/505 (42%), Gaps = 60/505 (11%)
Query: 41 LHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXX 100
L D++L LI+ + ++ + ++F + + W I+ +S + H
Sbjct: 32 LDKDVYLCNNLINAYLETGDSV-SARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFL 90
Query: 101 XXXXXXXXXXXXFTFPYLLKSCANARTPHL--GLQLHCHLVKSRFHSHVFVANALLHFY- 157
+ F +L++C + + G Q+H + K + V+N L+ Y
Sbjct: 91 RDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYW 150
Query: 158 -CVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTL 216
C+ + A F + V++ VS+N +I+ + +AG + ++ M+ G RP EYT
Sbjct: 151 KCIGSVGY-ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF 209
Query: 217 VTLL-SACSSLE-DQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVS 274
+L+ +ACS E D R+ Q+ + + L D++ G
Sbjct: 210 GSLVTTACSLTEPDVRLLEQIMCTIQKS-----------GLLTDLFVGSG---------- 248
Query: 275 GVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY-XXXX 333
LVSA+A G + AR++F+QM R+ V+ ++ G +
Sbjct: 249 --------------LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 334 XXXXXXXXXXXMKPDE-VDVVAALSE--CARLGALELGRRIH---LKYAAENWHCGQNGG 387
+ P+ V ++++ E A L+ GR +H + ++ G G
Sbjct: 295 KLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 388 FTCAVVDMYAKCGSIDTALDVF-CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR 446
+V+MYAKCGSI A VF T KD ++ +NS+I+GL +G A+ ++ MR
Sbjct: 355 ----LVNMYAKCGSIADARRVFYFMTDKD---SVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 447 LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLL 506
++P T ++ L +C G++ S G++ + ++ L G L
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQ-IHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 507 SEAYHLILNMPFKANAVIWRALLSA 531
+E + +MP + + V W +++ A
Sbjct: 467 NECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGR 193
H L K+R V++ N L++ Y D+ +A KVF++MP+R+CVS+ +++G+ R G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 194 AGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRV--GRQVHGLVYRELGCLGDNAL 251
++ L DM GI ++Y V++L AC + + GRQ+HGL+++ +A+
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL--SYAVDAV 140
Query: 252 LVNALVDMYAKC-GCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
+ N L+ MY KC G + A + SV +W S++S Y+ GD A R+F M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSV--SWNSIISVYSQAGDQRSAFRIFSSM 197
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 182/604 (30%), Positives = 289/604 (47%), Gaps = 56/604 (9%)
Query: 31 QIQAHMVVTGLHHDLFL--STALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS 88
Q+ A V G + FL S L+ + R L + LF + D +N +I +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRR-LDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 89 LSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVF 148
+ FTF +LK+ LG QLH V + F
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
V N +L FY +F++MP D VSYN++I+ + +A + S+ +M+ G
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLV-NALVDMYAKCGCLE 267
+ T+LS ++L ++GRQ+H + L D+ L V N+LVDMYAKC E
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHC---QALLATADSILHVGNSLVDMYAKCEMFE 403
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
AE + F + +R VSWTA+ISGY
Sbjct: 404 EAELI---------------------------------FKSLPQRTTVSWTALISGYVQK 430
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHL----KYAAENWHCG 383
G ++ D+ L A +L LG+++H EN G
Sbjct: 431 GLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG 490
Query: 384 QNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFE 443
+VDMYAKCGSI A+ VF + + + +N++IS A +G G+ AI F
Sbjct: 491 S------GLVDMYAKCGSIKDAVQVFEEMPD--RNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 444 EMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRG 503
+M GL PD V+ + +L AC H G V++G + F++MS +YG+ P+ +HY C++DLLGR
Sbjct: 543 KMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRN 602
Query: 504 GLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEH-DHGARYVML 562
G +EA L+ MPF+ + ++W ++L+AC++H + LA+ A ++L ++E A YV +
Sbjct: 603 GRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSM 662
Query: 563 SNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELML 622
SN+ A + ++ V+KA+ GI+K P +S+VE+N +H F + D++HP + ++
Sbjct: 663 SNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG---DEIV 719
Query: 623 RDIN 626
R IN
Sbjct: 720 RKIN 723
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 6/212 (2%)
Query: 254 NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD 313
N +V+ + G + A +V + + +V + +++S + GDV AR LFD M +R
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTV--STNTMISGHVKTGDVSSARDLFDAMPDRT 109
Query: 314 VVSWTAMISGYSHAGYXXXXXXXXXXX--XXXXMKPDEVDVVAALSECARLGALELGRRI 371
VV+WT ++ Y+ + PD V L C ++
Sbjct: 110 VVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQV 169
Query: 372 HLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAH 431
H + + ++ Y + +D A +F + +K ++ +N++I+G
Sbjct: 170 HAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP--EKDSVTFNTLITGYEK 227
Query: 432 HGLGKYAITLFEEMRLLGLVPDGVTFVALLCA 463
GL +I LF +MR G P TF +L A
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 263/525 (50%), Gaps = 53/525 (10%)
Query: 117 YLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHN----AYKVFEQ 172
YLLK C N Q+H +K + + + C N A +F
Sbjct: 35 YLLKRCHNIDEFK---QVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRG 91
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
+ +N MI G+V ++ +M G PD +T LL AC+ L+ R G
Sbjct: 92 IDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREG 151
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
+Q+HG V++ LG D + N+L++MY +CG
Sbjct: 152 KQIHGQVFK-LGLEAD-VFVQNSLINMYGRCG---------------------------- 181
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG-YXXXXXXXXXXXXXXXMKPDEVD 351
++E++ +F+++ + SW++M+S + G + +K +E
Sbjct: 182 -----EMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESG 236
Query: 352 VVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDV 408
+V+AL CA GAL LG IH L+ +E N ++VDMY KCG +D AL +
Sbjct: 237 MVSALLACANTGALNLGMSIHGFLLRNISE-----LNIIVQTSLVDMYVKCGCLDKALHI 291
Query: 409 FCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSG 468
F K +K+ + Y+++ISGLA HG G+ A+ +F +M GL PD V +V++L AC HSG
Sbjct: 292 FQKM--EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSG 349
Query: 469 LVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRAL 528
LV EG++ F M V P EHYGC+VDLLGR GLL EA I ++P + N VIWR
Sbjct: 350 LVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTF 409
Query: 529 LSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQ 588
LS C+V ++EL ++A QELL + + Y+++SN+ + D+ A R I G++
Sbjct: 410 LSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLK 469
Query: 589 KPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+ PG+S VE+ G H+F++ D+SHP+ K ML + +K G
Sbjct: 470 QTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEG 514
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 163/370 (44%), Gaps = 42/370 (11%)
Query: 61 ALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLK 120
++ ++ +F + +P F +N +I+ + + FT+P LLK
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 121 SCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVS 180
+C ++ G Q+H + K + VFV N+L++ Y + + VFE++ + S
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 181 YNMMINGFVRAGR---AGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
++ M++ RAG + C + G ++ +E +V+ L AC++ +G +HG
Sbjct: 201 WSSMVSA--RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 238 LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
+ R + L N ++ +LVDMY KCGCL
Sbjct: 259 FLLRNISEL--NIIVQTSLVDMYVKCGCL------------------------------- 285
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS 357
+ A +F +M +R+ ++++AMISG + G ++PD V V+ L+
Sbjct: 286 --DKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLN 343
Query: 358 ECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKK 417
C+ G ++ GRR+ + E + C +VD+ + G ++ AL+ ++ +K
Sbjct: 344 ACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC-LVDLLGRAGLLEEALETI-QSIPIEK 401
Query: 418 TTILYNSIIS 427
+++ + +S
Sbjct: 402 NDVIWRTFLS 411
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/571 (28%), Positives = 285/571 (49%), Gaps = 45/571 (7%)
Query: 29 ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS 88
+Q AH+V +GL D + +L+S + +R + R+F D W +++ +
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV 139
Query: 89 LSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVF 148
H FT +K+C+ LG H ++ F + F
Sbjct: 140 TGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHF 199
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM-RGF 207
+++ L + Y V R+ +A +VF++MP D + + +++ F + ++ + M RG
Sbjct: 200 ISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 259
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
G+ PD T T+L+AC +L + G+++HG + +G N ++ ++L+DMY KCG +
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN--GIGSNVVVESSLLDMYGKCGSVR 317
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
A +V +G+ SV +W++L+ Y G+ E A +F +M E+D+ + +
Sbjct: 318 EARQVFNGMSKKNSV--SWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTV------- 368
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG 387
L CA L A+ LG+ IH +Y C N
Sbjct: 369 ----------------------------LKACAGLAAVRLGKEIHGQYVRRG--CFGNVI 398
Query: 388 FTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRL 447
A++D+Y K G ID+A V+ K S + I +N+++S LA +G G+ A++ F +M
Sbjct: 399 VESALIDLYGKSGCIDSASRVYSKMSI--RNMITWNAMLSALAQNGRGEEAVSFFNDMVK 456
Query: 448 LGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLS 507
G+ PD ++F+A+L ACGH+G+VDEG+ F M+ YG+ P EHY C++DLLGR GL
Sbjct: 457 KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFE 516
Query: 508 EAYHLILNMPFKANAVIWRALLSACKVHGDV-ELAKLACQELLAVEHDHGARYVMLSNML 566
EA +L+ + +A +W LL C + D +A+ + ++ +E + YV+LSNM
Sbjct: 517 EAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMY 576
Query: 567 ADMDQHDEAASVRKAIDNVGIQKPPGWSYVE 597
+ +H +A ++RK + G+ K G S+++
Sbjct: 577 KAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 188/438 (42%), Gaps = 65/438 (14%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDA-HNAYKVFEQM 173
+ LL++C + G+Q H H+VKS + V N+LL Y +VF+
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
V+D +S+ M++G+V +++V +M FG+ +E+TL + + ACS L + R+GR
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
HG+V N + + L +Y
Sbjct: 184 CFHGVVITH--GFEWNHFISSTLAYLYG-------------------------------- 209
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG-YXXXXXXXXXXXXXXXMKPDEVDV 352
+R V+ ARR+FD+M E DV+ WTA++S +S Y + PD
Sbjct: 210 VNREPVD-ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTF 268
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
L+ C L L+ G+ IH K G N +++DMY KCGS+ A VF
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITNG--IGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
S KK ++ +++++ G +G + AI +F EM D F +L AC V
Sbjct: 327 S--KKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRL 380
Query: 473 GKKPFESMSTVYGVNPQMEHYGC---------VVDLLGRGGLLSEAYHLILNMPFKANAV 523
GK+ ++ Q GC ++DL G+ G + A + M + N +
Sbjct: 381 GKE----------IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMI 429
Query: 524 IWRALLSACKVHGDVELA 541
W A+LSA +G E A
Sbjct: 430 TWNAMLSALAQNGRGEEA 447
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 133/291 (45%), Gaps = 12/291 (4%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
R ++Q +I ++ G+ ++ + ++L+ + ++R + ++F+ ++ + W+A+
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCG-SVREARQVFNGMSKKNSVSWSAL 337
Query: 84 IKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
+ + + H + F +LK+CA LG ++H V+
Sbjct: 338 LGGYCQNGEHE----KAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGC 393
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
+V V +AL+ Y +A +V+ +M +R+ +++N M++ + GR ++ D
Sbjct: 394 FGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFND 453
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKC 263
M GI+PD + + +L+AC GR L+ + G + + ++D+ +
Sbjct: 454 MVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYG-IKPGTEHYSCMIDLLGRA 512
Query: 264 GCLELAERVV--SGVRNGKSVVAAWTSLVSAYASRGDV-EVARRLFDQMGE 311
G E AE ++ + RN S+ W L+ A+ D VA R+ +M E
Sbjct: 513 GLFEEAENLLERAECRNDASL---WGVLLGPCAANADASRVAERIAKRMME 560
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/501 (31%), Positives = 271/501 (54%), Gaps = 44/501 (8%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
T+ L+K C + R H G + HL + +F+ N L++ Y F ++A+++F+QM
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
P R+ +S+ MI+ + + ++++L M +RP+ YT ++L +C+ + D R+
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM-- 180
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
+H + +E L + + +AL+D++AK G E A V + G ++V W S++ +
Sbjct: 181 -LHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV--WNSIIGGF 235
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
A +VA LF +M AG+ ++ +
Sbjct: 236 AQNSRSDVALELFKRM---------------KRAGFIA----------------EQATLT 264
Query: 354 AALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTS 413
+ L C L LELG + H+ + Q+ A+VDMY KCGS++ AL VF
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVKYD----QDLILNNALVDMYCKCGSLEDALRVF--NQ 318
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
++ I ++++ISGLA +G + A+ LFE M+ G P+ +T V +L AC H+GL+++G
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
F SM +YG++P EHYGC++DLLG+ G L +A L+ M + +AV WR LL AC+
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACR 438
Query: 534 VHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGW 593
V ++ LA+ A ++++A++ + Y +LSN+ A+ + D +R + + GI+K PG
Sbjct: 439 VQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGC 498
Query: 594 SYVEMNGALHKFLAGDKSHPE 614
S++E+N +H F+ GD SHP+
Sbjct: 499 SWIEVNKQIHAFIIGDNSHPQ 519
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 154/330 (46%), Gaps = 15/330 (4%)
Query: 3 HPLASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRAL 62
H L + SA+Y + S+ R + + I H+ G +FL LI+ + L
Sbjct: 55 HGLWADSATYSELIKCCISN-RAVHEGNLICRHLYFNGHRPMMFLVNVLINMY-VKFNLL 112
Query: 63 RHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSC 122
+ +LF + ++ W +I A+S H +T+ +L+SC
Sbjct: 113 NDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC 172
Query: 123 ANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYN 182
+ LHC ++K S VFV +AL+ + + +A VF++M D + +N
Sbjct: 173 NGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWN 229
Query: 183 MMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRE 242
+I GF + R+ ++++ M+ G ++ TL ++L AC+ L +G Q H + +
Sbjct: 230 SIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK- 288
Query: 243 LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVA 302
+ +L NALVDMY KCG LE A RV + ++ V W++++S A G + A
Sbjct: 289 ---YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD--VITWSTMISGLAQNGYSQEA 343
Query: 303 RRLFDQMG----ERDVVSWTAMISGYSHAG 328
+LF++M + + ++ ++ SHAG
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAG 373
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 289/586 (49%), Gaps = 58/586 (9%)
Query: 22 SCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWN 81
SCR + +I +MV TGL D F + L++F ++ +R++ +F V+N +LF++N
Sbjct: 37 SCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAF--SSVLDIRYASSIFEHVSNTNLFMFN 94
Query: 82 AIIKAHSLS--PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
+I+ +S+S P AF F+F LKSC+ +G LH +
Sbjct: 95 TMIRGYSISDEPERAFSVFNQLRAKGLTLDR--FSFITTLKSCSRELCVSIGEGLHGIAL 152
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR-DCVSYNMMINGFVRAGRAGCSM 198
+S F + NAL+HFYCV +A KVF++MP D V+++ ++NG+++ + ++
Sbjct: 153 RSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALAL 212
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
+ MR + + TL++ LSA S L D H L + +G L + L+ AL+
Sbjct: 213 DLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIK-IG-LDLDLHLITALIG 270
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWT 318
MY K G + ARR+FD +DVV+W
Sbjct: 271 MYGKT---------------------------------GGISSARRIFDCAIRKDVVTWN 297
Query: 319 AMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
MI Y+ G MKP+ V LS CA A +GR + E
Sbjct: 298 CMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTV--ADLLE 355
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK-TSKDKKTTILYNSIISGLAHHGLGKY 437
+ A+VDMYAK G ++ A+++F + KD K+ + ++ISG HGL +
Sbjct: 356 EERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS---WTAMISGYGAHGLARE 412
Query: 438 AITLFEEMRLLG--LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGC 495
A+TLF +M + P+ +TF+ +L AC H GLV EG + F+ M Y P++EHYGC
Sbjct: 413 AVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGC 472
Query: 496 VVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDH 555
VVDLLGR G L EAY LI N+P +++ WRALL+AC+V+G+ +L + L + H
Sbjct: 473 VVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETH 532
Query: 556 GARYVMLSNMLADMDQHDEAASVRKAIDNV--GIQKPPGWSYVEMN 599
A ++L+ H A + K++DN +K G+S +E+
Sbjct: 533 PADAILLAG------THAVAGNPEKSLDNELNKGRKEAGYSAIEIE 572
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 251/524 (47%), Gaps = 43/524 (8%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
FTFP K+ A+ R P G Q+H VK VFV + YC R +A K+F++
Sbjct: 109 FTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDE 168
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
+P R+ ++N I+ V GR +++ + R P+ T L+ACS +G
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
Q+HGLV R + + N L+D Y KC + +E +
Sbjct: 229 MQLHGLVLR--SGFDTDVSVCNGLIDFYGKCKQIRSSEII-------------------- 266
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
F +MG ++ VSW ++++ Y ++ + +
Sbjct: 267 -------------FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI 313
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT-CAVVDMYAKCGSIDTALDVFCK 411
+ LS CA + LELGR IH C + F A+VDMY KCG I+ + F
Sbjct: 314 SSVLSACAGMAGLELGRSIHAHAVKA---CVERTIFVGSALVDMYGKCGCIEDSEQAF-- 368
Query: 412 TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM--RLLGLVPDGVTFVALLCACGHSGL 469
+K + NS+I G AH G A+ LFEEM R G P+ +TFV+LL AC +G
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
V+ G K F+SM + YG+ P EHY C+VD+LGR G++ AY I MP + +W AL
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 530 SACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQK 589
+AC++HG +L LA + L ++ +V+LSN A + EA +VR+ + VGI+K
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 590 PPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
G+S++ + +H F A D+SH K + L + +++ G
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAG 592
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 176/436 (40%), Gaps = 50/436 (11%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKS-RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR 176
LLK+ +A + LG +H +VK+ F+AN L++ Y +A V P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVH 236
+ VS+ +I+G + G ++ +MR G+ P+++T A +SL G+Q+H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASR 296
L A+ ++D++ C ++ Y
Sbjct: 132 AL-----------AVKCGRILDVFVGCSAFDM------------------------YCKT 156
Query: 297 GDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAAL 356
+ AR+LFD++ ER++ +W A IS G P+ + A L
Sbjct: 157 RLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216
Query: 357 SECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTS 413
+ C+ L LG ++H L+ + NG ++D Y KC I ++ +F T
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG-----LIDFYGKCKQIRSSEIIF--TE 269
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCAC-GHSGLVDE 472
K + + S+++ + + A L+ R + ++L AC G +GL E
Sbjct: 270 MGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL--E 327
Query: 473 GKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSAC 532
+ + + V + +VD+ G+ G + ++ MP K N V +L+
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGY 386
Query: 533 KVHGDVELAKLACQEL 548
G V++A +E+
Sbjct: 387 AHQGQVDMALALFEEM 402
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 5/265 (1%)
Query: 30 LQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSL 89
+Q+ ++ +G D+ + LI F+ + +R S +F+ + + W +++ A+
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYG-KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ 287
Query: 90 SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFV 149
+ F +L +CA LG +H H VK+ +FV
Sbjct: 288 NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFV 347
Query: 150 ANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM--RGF 207
+AL+ Y ++ + F++MP ++ V+ N +I G+ G+ ++ + +M RG
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 407
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
G P+ T V+LLSACS G ++ + G + A + +VDM + G +E
Sbjct: 408 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG-IEPGAEHYSCIVDMLGRAGMVE 466
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSA 292
A + + + ++ W +L +A
Sbjct: 467 RAYEFIKKMPI-QPTISVWGALQNA 490
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 182/602 (30%), Positives = 296/602 (49%), Gaps = 29/602 (4%)
Query: 30 LQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSL 89
LQ+ A +VV + D FL++ LISF+ R R +L +F +T + F +NA++ A++
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDR-FRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 90 SPNH--AFXXXXX----XXXXXXXXXXXXFTFPYLLKS---CANARTPHLGLQLHCHLVK 140
+ AF + +LK+ C + L Q+H +++
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 141 SRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKV 200
F S VFV N ++ +Y + +A KVF++M RD VS+N MI+G+ ++G K+
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 201 LGDMRGFG-IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDM 259
M +P+ T++++ AC D G +VH + + + L NA++
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE--NHIQMDLSLCNAVIGF 278
Query: 260 YAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTA 319
YAKCG L+ A + + SV + +++S Y + G V+ A LF +M + +W A
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSVT--YGAIISGYMAHGLVKEAMALFSEMESIGLSTWNA 336
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYA 376
MISG + +P+ V + + L L+ G+ IH ++
Sbjct: 337 MISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG 396
Query: 377 AENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF--CKTSKDKKTTILYNSIISGLAHHGL 434
A+N N T +++D YAK G + A VF CK ++ I + +II+ A HG
Sbjct: 397 ADN-----NIYVTTSIIDNYAKLGFLLGAQRVFDNCK----DRSLIAWTAIITAYAVHGD 447
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
A +LF++M+ LG PD VT A+L A HSG D + F+SM T Y + P +EHY
Sbjct: 448 SDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYA 507
Query: 495 CVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHD 554
C+V +L R G LS+A I MP A +W ALL+ V GD+E+A+ AC L +E +
Sbjct: 508 CMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPE 567
Query: 555 HGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPE 614
+ Y +++N+ + +EA VR + +G++K PG S++E L F+A D S
Sbjct: 568 NTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCER 627
Query: 615 AK 616
+K
Sbjct: 628 SK 629
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 191/467 (40%), Gaps = 80/467 (17%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
+ +L++ R P LQLH +V F+A+ L+ FY A VF+++
Sbjct: 25 YGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEIT 84
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF------GIRPDEYTLVTLLSACSSLED 228
VR+ SYN ++ + + + G RPD ++ +L A S +D
Sbjct: 85 VRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDD 144
Query: 229 QRVG---RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAA 285
+G RQVHG V R G + + N ++ Y KC +E A +V + + V +
Sbjct: 145 FWLGSLARQVHGFVIR--GGFDSDVFVGNGMITYYTKCDNIESARKVFDEM--SERDVVS 200
Query: 286 WTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXM 345
W S++S Y+ G E ++++ M
Sbjct: 201 WNSMISGYSQSGSFEDCKKMYKAM------------------------------LACSDF 230
Query: 346 KPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTA 405
KP+ V V++ C + L G +H K EN H + AV+ YAKCGS+D A
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVH-KKMIEN-HIQMDLSLCNAVIGFYAKCGSLDYA 288
Query: 406 LDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLV-------------- 451
+F + S +K ++ Y +IISG HGL K A+ LF EM +GL
Sbjct: 289 RALFDEMS--EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNH 346
Query: 452 -----------------PDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
P+ VT +LL + +S + +G K + + G + +
Sbjct: 347 HEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNL-KGGKEIHAFAIRNGADNNIYVTT 405
Query: 495 CVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA 541
++D + G L A + N ++ + W A+++A VHGD + A
Sbjct: 406 SIIDNYAKLGFLLGAQRVFDNCKDRS-LIAWTAIITAYAVHGDSDSA 451
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 155/336 (46%), Gaps = 41/336 (12%)
Query: 29 ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS 88
A Q+ ++ G D+F+ +I+++ T + + ++F ++ D+ WN++I +S
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYY-TKCDNIESARKVFDEMSERDVVSWNSMISGYS 209
Query: 89 LSPN-HAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
S + T + ++C + GL++H ++++ +
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
+ NA++ FY A +F++M +D V+Y +I+G++ G +M + +M
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 208 GI-------------------------------RPDEYTLVTLLSACSSLEDQRVGRQVH 236
G+ RP+ TL +LL + + + + G+++H
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASR 296
R +N + +++D YAK G L A+RV ++ +S++ AWT++++AYA
Sbjct: 390 AFAIRNGA--DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKD-RSLI-AWTAIITAYAVH 445
Query: 297 GDVEVARRLFDQM----GERDVVSWTAMISGYSHAG 328
GD + A LFDQM + D V+ TA++S ++H+G
Sbjct: 446 GDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG 481
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 190/649 (29%), Positives = 312/649 (48%), Gaps = 54/649 (8%)
Query: 23 CRTIQQALQIQAHMVVTG-LHHDLFLSTALISFFATNHRAL--RHSLRLFSLVTNPDLFL 79
C T QQ Q+ A ++++ + L+ LIS +A L R+ SLV DL L
Sbjct: 66 CLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRL 125
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
WN+I+KA+ + + P +L++C L H ++
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMK 199
+ ++ V N LL Y +AY +F +MPVR+ +S+N+MI GF + ++K
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 200 VLGDMRGFGIRPDEYTLVTLLS-----------------------------------ACS 224
+ M+ +PDE T ++LS C+
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 225 SLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVA 284
LE + +VHG V + G + NAL+ +Y K G ++ AE + +RN +
Sbjct: 306 ELEALSIAEKVHGYVIK--GGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG--IE 361
Query: 285 AWTSLVSAYASRGDVEVARRLFDQMGERD--------VVSWTAMISGYSHAGYXXXXXXX 336
+W SL++++ G ++ A LF ++ E + VV+WT++I G + G
Sbjct: 362 SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEY 421
Query: 337 XXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMY 396
+ + V + LS CA L AL LGR IH + +N A+V+MY
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTS--MSENILVQNALVNMY 479
Query: 397 AKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVT 456
AKCG + VF + +DK I +NSII G HG + A+++F+ M G PDG+
Sbjct: 480 AKCGLLSEGSLVF-EAIRDKDL-ISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIA 537
Query: 457 FVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM 516
VA+L AC H+GLV++G++ F SMS +G+ PQ EHY C+VDLLGR G L EA ++ NM
Sbjct: 538 LVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Query: 517 PFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAA 576
P + + ALL++C++H +V++A+ +L +E + Y++LSN+ + + +E+A
Sbjct: 598 PMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESA 657
Query: 577 SVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDI 625
+VR ++K G S++E+ +KF +G E + +L D+
Sbjct: 658 NVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDL 706
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 193/672 (28%), Positives = 310/672 (46%), Gaps = 76/672 (11%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFS-LVTNPDLFLWNA 82
R I+ ++ + +V G H F+ AL+S +A N L + RLF D LWN+
Sbjct: 196 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDD-LSAARRLFDGFQEKGDAVLWNS 254
Query: 83 IIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSR 142
I+ ++S S +T L +C LG ++H ++KS
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS 314
Query: 143 FHS-HVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVL 201
HS ++V NAL+ Y A ++ QM D V++N +I G+V+ +++
Sbjct: 315 THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF 374
Query: 202 GDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDM-- 259
DM G + DE ++ ++++A L + G ++H V + N + N L+DM
Sbjct: 375 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH--GWDSNLQVGNTLIDMYS 432
Query: 260 -----------------------------YAKCGC---------------LELAERVVSG 275
YA+ C +E+ E ++
Sbjct: 433 KCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGS 492
Query: 276 VRNGKSVVAAW---------------------TSLVSAYASRGDVEVARRLFDQMGERDV 314
+ SV+ + LV Y ++ A R+F+ + +DV
Sbjct: 493 ILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 552
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLK 374
VSWT+MIS + G + D V ++ LS A L AL GR IH
Sbjct: 553 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC- 611
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
Y C + G AVVDMYA CG + +A VF + ++K + Y S+I+ HG
Sbjct: 612 YLLRKGFCLE-GSIAVAVVDMYACCGDLQSAKAVFDRI--ERKGLLQYTSMINAYGMHGC 668
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
GK A+ LF++MR + PD ++F+ALL AC H+GL+DEG+ + M Y + P EHY
Sbjct: 669 GKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV 728
Query: 495 CVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHD 554
C+VD+LGR + EA+ + M + A +W ALL+AC+ H + E+ ++A Q LL +E
Sbjct: 729 CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 788
Query: 555 HGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPE 614
+ V++SN+ A+ + ++ VR + G++K PG S++EM+G +HKF A DKSHPE
Sbjct: 789 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPE 848
Query: 615 AKATELMLRDIN 626
+K L ++
Sbjct: 849 SKEIYEKLSEVT 860
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 181/424 (42%), Gaps = 41/424 (9%)
Query: 24 RTIQQALQIQAHMVVTGLHHDL-FLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNA 82
R + Q Q+ + + T +L FL+ L+ F +L + ++F + + F WN
Sbjct: 94 RAVSQGRQLHSRIFKTFPSFELDFLAGKLV-FMYGKCGSLDDAEKVFDEMPDRTAFAWNT 152
Query: 83 IIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSR 142
+I A+ + A +FP LLK+CA R G +LH LVK
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 143 FHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR-DCVSYNMMINGFVRAGRAGCSMKVL 201
+HS F+ NAL+ Y D A ++F+ + D V +N +++ + +G++ ++++
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 202 GDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYA 261
+M G P+ YT+V+ L+AC ++G+++H V + + NAL+ MY
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS-STHSSELYVCNALIAMYT 331
Query: 262 KCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMI 321
+CG + AER++ + N V W SL+ Y + A F M +
Sbjct: 332 RCGKMPQAERILRQMNNAD--VVTWNSLIKGYVQNLMYKEALEFFSDM----------IA 379
Query: 322 SGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWH 381
+G+ K DEV + + ++ RL L G +H W
Sbjct: 380 AGH---------------------KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 382 CGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITL 441
G T ++DMY+KC F + K I + ++I+G A + A+ L
Sbjct: 419 SNLQVGNT--LIDMYSKCNLTCYMGRAFLRM--HDKDLISWTTVIAGYAQNDCHVEALEL 474
Query: 442 FEEM 445
F ++
Sbjct: 475 FRDV 478
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 158/355 (44%), Gaps = 42/355 (11%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV--FVANALLHFYCVFRDAHNAYKVFEQ 172
F Y+L+ C R G QLH + K+ F S F+A L+ Y +A KVF++
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKT-FPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
MP R ++N MI +V G ++ + +MR G+ + LL AC+ L D R G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
++H L+ + LG +VNALV MYAK L A R+ G + K W S++S+
Sbjct: 202 SELHSLLVK-LG-YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE-KGDAVLWNSILSS 258
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
Y++ G LF +M ++G + P+ +
Sbjct: 259 YSTSGKSLETLELFREM----------HMTGPA---------------------PNSYTI 287
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC-AVVDMYAKCGSIDTALDVFCK 411
V+AL+ C +LG+ IH + H + + C A++ MY +CG + A + +
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSE--LYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 412 TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGH 466
+ + +NS+I G + + K A+ F +M G D V+ +++ A G
Sbjct: 346 M--NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 117/311 (37%), Gaps = 38/311 (12%)
Query: 219 LLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRN 278
+L C GRQ+H +++ + L LV MY KCG L+ AE+V
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSF-ELDFLAGKLVFMYGKCGSLDDAEKV------ 138
Query: 279 GKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXX 338
FD+M +R +W MI Y G
Sbjct: 139 ---------------------------FDEMPDRTAFAWNTMIGAYVSNGEPASALALYW 171
Query: 339 XXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAK 398
+ A L CA+L + G +H +H G A+V MYAK
Sbjct: 172 NMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYH--STGFIVNALVSMYAK 229
Query: 399 CGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFV 458
+ A +F ++K +L+NSI+S + G + LF EM + G P+ T V
Sbjct: 230 NDDLSAARRLF-DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 288
Query: 459 ALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPF 518
+ L AC GK+ S+ + ++ ++ + R G + +A ++ M
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN- 347
Query: 519 KANAVIWRALL 529
A+ V W +L+
Sbjct: 348 NADVVTWNSLI 358
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/599 (28%), Positives = 289/599 (48%), Gaps = 41/599 (6%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKA--HS 88
Q+ ++ G ++++ ++L+ +A R + + F ++ P+ WNA+I
Sbjct: 122 QVHGLVIKGGYECNVYVGSSLVDMYAKCER-VEDAFEAFKEISEPNSVSWNALIAGFVQV 180
Query: 89 LSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVF 148
AF TF LL + +L Q+H ++K +
Sbjct: 181 RDIKTAFWLLGLMEMKAAVTMDAG-TFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEIT 239
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMP-VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
+ NA++ Y +A +VF+ + +D +S+N MI GF + + ++ M+
Sbjct: 240 ICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRH 299
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
+ D YT LLSACS E Q G+ +HG+V ++ L NAL+ MY +
Sbjct: 300 WVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKK--GLEQVTSATNALISMYIQ----- 352
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
G +E A LF+ + +D++SW ++I+G++
Sbjct: 353 --------------------------FPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 386
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG 387
G +K D+ A L C+ L L+LG++IH + N
Sbjct: 387 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFV--SNEF 444
Query: 388 FTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRL 447
+++ MY+KCG I++A F + S K +T+ +N++I G A HGLG+ ++ LF +M
Sbjct: 445 VISSLIVMYSKCGIIESARKCFQQISS-KHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN 503
Query: 448 LGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLS 507
+ D VTF A+L AC H+GL+ EG + M VY + P+MEHY VDLLGR GL++
Sbjct: 504 QNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVN 563
Query: 508 EAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLA 567
+A LI +MP + ++ + L C+ G++E+A LL +E + YV LS+M +
Sbjct: 564 KAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYS 623
Query: 568 DMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDIN 626
D+ + +E ASV+K + G++K PGWS++E+ + F A D+S+P + +M++D+
Sbjct: 624 DLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLT 682
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 197/455 (43%), Gaps = 60/455 (13%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
++F LLK A+ + LG Q+H ++K + +V+V ++L+ Y +A++ F++
Sbjct: 102 YSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKE 161
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMR-GFGIRPDEYTLVTLLSACSSLEDQRV 231
+ + VS+N +I GFV+ + +LG M + D T LL+ +
Sbjct: 162 ISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNL 221
Query: 232 GRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVS 291
+QVH V + LG L + NA++ YA CG + A+RV G+ K ++ +W S+++
Sbjct: 222 LKQVHAKVLK-LG-LQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLI-SWNSMIA 278
Query: 292 AYASRGDVEVARRLFDQMG----ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKP 347
++ E A LF QM E D+ ++T +
Sbjct: 279 GFSKHELKESAFELFIQMQRHWVETDIYTYTGL--------------------------- 311
Query: 348 DEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAK--CGSI 402
LS C+ G+ +H +K E Q T A++ MY + G++
Sbjct: 312 --------LSACSGEEHQIFGKSLHGMVIKKGLE-----QVTSATNALISMYIQFPTGTM 358
Query: 403 DTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC 462
+ AL +F S K I +NSII+G A GL + A+ F +R + D F ALL
Sbjct: 359 EDALSLF--ESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLR 416
Query: 463 ACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANA 522
+C + G++ +++T G ++ + + G++ A + K +
Sbjct: 417 SCSDLATLQLGQQ-IHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHST 475
Query: 523 VIWRALLSACKVHG----DVELAKLACQELLAVEH 553
V W A++ HG ++L C + + ++H
Sbjct: 476 VAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 135 HCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRA 194
HC+ +K S ++V+N +L Y F A +F++MP RD VS+N MI+G+ G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 195 GCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN 254
+ + M+ G D Y+ LL +S++ +G QVHGLV + G N + +
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIK--GGYECNVYVGS 140
Query: 255 ALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV 314
+LVDMYAKC +E A + SV +W +L++ + D++ A L M +
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSV--SWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 315 VSWTA 319
V+ A
Sbjct: 199 VTMDA 203
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 289 LVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPD 348
++ +Y G + A LFD+M +RD VSW MISGY+ G D
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD 100
Query: 349 EVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDV 408
L A + +LG ++H + C G ++VDMYAKC ++ A +
Sbjct: 101 GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG--SSLVDMYAKCERVEDAFEA 158
Query: 409 FCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVP-DGVTFVALL 461
F + S + ++ +N++I+G K A L M + V D TF LL
Sbjct: 159 FKEIS--EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 171/603 (28%), Positives = 292/603 (48%), Gaps = 42/603 (6%)
Query: 32 IQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSP 91
+ + +V G + F+ ALI+ ++ ++ + +F + D+ +W I+ + +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCG-SVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 92 NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVAN 151
+TF LK+ +H ++K+ + V
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 152 ALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRP 211
LL Y D +A+KVF +MP D V ++ MI F + G ++ + MR + P
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 212 DEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAER 271
+E+TL ++L+ C+ + +G Q+HGLV + +G + + NAL+D+YAKC
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVK-VG-FDLDIYVSNALIDVYAKCE------- 397
Query: 272 VVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXX 331
++ A +LF ++ ++ VSW +I GY + G
Sbjct: 398 --------------------------KMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGG 431
Query: 332 XXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH-LKYAAENWHCGQNGGFTC 390
+ EV +AL CA L +++LG ++H L N + +
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN---AKKVAVSN 488
Query: 391 AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL 450
+++DMYAKCG I A VF + +N++ISG + HGLG+ A+ + + M+
Sbjct: 489 SLIDMYAKCGDIKFAQSVF--NEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDC 546
Query: 451 VPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAY 510
P+G+TF+ +L C ++GL+D+G++ FESM +G+ P +EHY C+V LLGR G L +A
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAM 606
Query: 511 HLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMD 570
LI +P++ + +IWRA+LSA + E A+ + +E+L + A YV++SNM A
Sbjct: 607 KLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAK 666
Query: 571 QHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVK 630
Q AS+RK++ +G++K PG S++E G +H F G HP+ K ML +NM
Sbjct: 667 QWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKAT 726
Query: 631 SIG 633
G
Sbjct: 727 RAG 729
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 13/279 (4%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
Q+ +V G D+++S ALI +A + + +++LF+ +++ + WN +I +
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEK-MDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
TF L +CA+ + LG+Q+H +K+ V V+
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
N+L+ Y D A VF +M D S+N +I+G+ G ++++L M+ +
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 211 PDEYTLVTLLSACSS--LEDQRVGRQVHGLVYRELG---CLGDNALLVNALVDMYAKCGC 265
P+ T + +LS CS+ L DQ G++ + R+ G CL +V L + G
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQ--GQECFESMIRDHGIEPCLEHYTCMVRLL----GRSGQ 601
Query: 266 LELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARR 304
L+ A +++ G+ SV+ W +++SA ++ + E ARR
Sbjct: 602 LDKAMKLIEGIPYEPSVM-IWRAMLSASMNQNNEEFARR 639
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 163/415 (39%), Gaps = 51/415 (12%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD 177
+L+ C P +HC ++K +F N LL+ Y +A +F++MP R+
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
VS+ + G+ G ++ G + P +T + L SL+ + +H
Sbjct: 115 NVSFVTLAQGYACQDPIGLYSRL--HREGHELNPHVFT--SFLKLFVSLDKAEICPWLHS 170
Query: 238 LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
+ + LG NA + AL++ Y+ CG ++ A V G+ VV W +VS Y G
Sbjct: 171 PIVK-LG-YDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV--WAGIVSCYVENG 226
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS 357
E + +L M AG+ P+ AL
Sbjct: 227 YFEDSLKLLSCM---------------RMAGFM----------------PNNYTFDTALK 255
Query: 358 ECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKK 417
LGA + + +H + + G ++ +Y + G + A VF + K+
Sbjct: 256 ASIGLGAFDFAKGVHGQILKTCYVLDPRVGV--GLLQLYTQLGDMSDAFKVFNEMPKND- 312
Query: 418 TTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL--CACGH-SGLVDEGK 474
+ ++ +I+ +G A+ LF MR +VP+ T ++L CA G SGL ++
Sbjct: 313 -VVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ-- 369
Query: 475 KPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
+ G + + ++D+ + + A L + K N V W ++
Sbjct: 370 --LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVI 421
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 189/671 (28%), Positives = 312/671 (46%), Gaps = 87/671 (12%)
Query: 5 LASSSASYDRV----KALLASSC---RTIQQALQIQAHMVVTGLHHDLFLSTALISFFAT 57
L SSSA D + A L S+C R +Q+ AH + +G+ + L L++F++
Sbjct: 31 LQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYS- 89
Query: 58 NHRALRHSLRLFSLVTNPDLF---LWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFT 114
A S++ N D+ WN +I +++ + FT
Sbjct: 90 ---AFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFT 146
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
+P +LK+C G +H + S + S ++V NAL+ Y FR+ A ++F++M
Sbjct: 147 YPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMF 206
Query: 175 VRDCVSYNMMINGFVRAG---------------------------RAGC--------SMK 199
RD VS+N +IN + G GC ++
Sbjct: 207 ERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALG 266
Query: 200 VLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDM 259
++ MR F D ++ L ACS + R+G+++HGL DN + N L+ M
Sbjct: 267 LISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDN--VRNTLITM 324
Query: 260 YAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTA 319
Y+KC +L ++ + ++ + W S++S YA E A L +M
Sbjct: 325 YSKCK--DLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREM---------- 372
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
+++G+ +P+ + + + L CAR+ L+ G+ H Y
Sbjct: 373 LVAGF---------------------QPNSITLASILPLCARIANLQHGKEFHC-YILRR 410
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAI 439
++VD+YAK G I A V SK + T Y S+I G + G G A+
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVT--YTSLIDGYGNQGEGGVAL 468
Query: 440 TLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDL 499
LF+EM G+ PD VT VA+L AC HS LV EG++ F M YG+ P ++H+ C+VDL
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDL 528
Query: 500 LGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARY 559
GR G L++A +I NMP+K + W LL+AC +HG+ ++ K A ++LL ++ ++ Y
Sbjct: 529 YGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYY 588
Query: 560 VMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATE 619
V+++NM A + A VR + ++G++K PG ++++ + F GD S PEA T
Sbjct: 589 VLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTY 648
Query: 620 LMLRDINMGVK 630
+L +N +K
Sbjct: 649 PLLDGLNQLMK 659
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 244/452 (53%), Gaps = 8/452 (1%)
Query: 162 DAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLS 221
D AYK ++ +N +I GF + S+ V M FG+ PD T L+
Sbjct: 57 DVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMK 116
Query: 222 ACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKS 281
+ S L ++++G +H V + L + + N L+ MY A ++ + +
Sbjct: 117 SSSRLSNRKLGGSLHCSVVK--SGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL 174
Query: 282 VVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG-YXXXXXXXXXXX 340
V W S++ AYA GDV AR +FD+M ERDVV+W++MI GY G Y
Sbjct: 175 VT--WNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMM 232
Query: 341 XXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCG 400
K +EV +V+ + CA LGAL G+ +H +Y + H +++DMYAKCG
Sbjct: 233 RMGSSKANEVTMVSVICACAHLGALNRGKTVH-RYILDV-HLPLTVILQTSLIDMYAKCG 290
Query: 401 SIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVAL 460
SI A VF + S + +++N+II GLA HG + ++ LF +MR + PD +TF+ L
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 350
Query: 461 LCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKA 520
L AC H GLV E F+S+ G P+ EHY C+VD+L R GL+ +A+ I MP K
Sbjct: 351 LAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKP 409
Query: 521 NAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRK 580
+ ALL+ C HG++ELA+ ++L+ ++ + RYV L+N+ A Q A S+R+
Sbjct: 410 TGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMRE 469
Query: 581 AIDNVGIQKPPGWSYVEMNGALHKFLAGDKSH 612
A++ G++K G S ++++G H+F+A DK+H
Sbjct: 470 AMEKKGVKKIAGHSILDLDGTRHRFIAHDKTH 501
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 118/534 (22%), Positives = 223/534 (41%), Gaps = 90/534 (16%)
Query: 16 KALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRA-LRHSLRLFSLVTN 74
K++L C+++ + +I ++ GL + + +SF A + + ++ + S +++
Sbjct: 11 KSILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSD 70
Query: 75 PDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQL 134
P + WN +I+ S S N T+P+L+KS + LG L
Sbjct: 71 PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSL 130
Query: 135 HCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP-------------------- 174
HC +VKS +F+ N L+H Y FRD +A K+F++MP
Sbjct: 131 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDV 190
Query: 175 -----------VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVTLLSA 222
RD V+++ MI+G+V+ G ++++ M G + +E T+V+++ A
Sbjct: 191 VSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICA 250
Query: 223 CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV 282
C+ L G+ VH + L +L +L+DMYAKCG S+
Sbjct: 251 CAHLGALNRGKTVHRYILDV--HLPLTVILQTSLIDMYAKCG----------------SI 292
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
AW+ A + E D + W A+I G + G+
Sbjct: 293 GDAWSVFYRA---------------SVKETDALMWNAIIGGLASHGFIRESLQLFHKMRE 337
Query: 343 XXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSI 402
+ PDE+ + L+ C+ G ++ K E+ ++ + C +VD+ ++ G +
Sbjct: 338 SKIDPDEITFLCLLAACSHGGLVKEAWHF-FKSLKESGAEPKSEHYAC-MVDVLSRAGLV 395
Query: 403 DTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC 462
A D F K T + ++++G +HG + A T+ + +L+ L P
Sbjct: 396 KDAHD-FISEMPIKPTGSMLGALLNGCINHGNLELAETVGK--KLIELQPH--------- 443
Query: 463 ACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM 516
++G+ + ++ VY +N Q + + + + G+ A H IL++
Sbjct: 444 --------NDGR--YVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDL 487
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 159/517 (30%), Positives = 260/517 (50%), Gaps = 42/517 (8%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD 177
LLK C + G +H H+++S F + + N LL+ Y A KVFE+MP RD
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
V++ +I+G+ + R ++ M FG P+E+TL +++ A ++ G Q+HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 238 LVYRELGCLGDNALLV-NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASR 296
+ C D+ + V +AL+D+Y + G ++ A+ V
Sbjct: 186 FCVK---CGFDSNVHVGSALLDLYTRYGLMDDAQLV------------------------ 218
Query: 297 GDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAAL 356
FD + R+ VSW A+I+G++ +P +
Sbjct: 219 ---------FDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLF 269
Query: 357 SECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDK 416
C+ G LE G+ +H G T ++DMYAK GSI A +F + +K
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT--LLDMYAKSGSIHDARKIFDRLAK-- 325
Query: 417 KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKP 476
+ + +NS+++ A HG GK A+ FEEMR +G+ P+ ++F+++L AC HSGL+DEG
Sbjct: 326 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 477 FESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
+E M G+ P+ HY VVDLLGR G L+ A I MP + A IW+ALL+AC++H
Sbjct: 386 YELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHK 444
Query: 537 DVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYV 596
+ EL A + + ++ D +V+L N+ A + ++AA VRK + G++K P S+V
Sbjct: 445 NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Query: 597 EMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
E+ A+H F+A D+ HP+ + ++ +K +G
Sbjct: 505 EIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 178/436 (40%), Gaps = 55/436 (12%)
Query: 14 RVKALLASSCRTIQQALQ---IQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFS 70
R L C + +Q + AH++ + HD+ + L++ +A +L + ++F
Sbjct: 61 RFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG-SLEEARKVFE 119
Query: 71 LVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHL 130
+ D W +I +S FT ++K+ A R
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVR 190
G QLH VK F S+V V +ALL Y + +A VF+ + R+ VS+N +I G R
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 191 AGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNA 250
++++ M G RP ++ +L ACSS G+ VH + + L A
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV--A 297
Query: 251 LLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG 310
N L+DMYAK G + A ++ R K V +W SL++AYA G + A F++M
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFD--RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM- 354
Query: 311 ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR 370
++P+E+ ++ L+ C+ G L+ G
Sbjct: 355 ------------------------------RRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 371 IH--LK---YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSI 425
+ +K E WH VVD+ + G ++ AL F + + T ++ ++
Sbjct: 385 YYELMKKDGIVPEAWH-------YVTVVDLLGRAGDLNRALR-FIEEMPIEPTAAIWKAL 436
Query: 426 ISGLAHHG---LGKYA 438
++ H LG YA
Sbjct: 437 LNACRMHKNTELGAYA 452
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 271/504 (53%), Gaps = 23/504 (4%)
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
L+ CA RT LH H+VK +AN L++ Y A +A +VF++MP RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVTLLSACSSLEDQRVGRQVH- 236
+++ ++ +A +G ++ V + +RPD++ L+ AC++L GRQVH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASR 296
+ E ++ ++ ++LVDMYAKCG L A+ V +R ++ +WT++VS YA
Sbjct: 130 HFIVSEYA---NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTI--SWTAMVSGYAKS 184
Query: 297 GDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAAL 356
G E A LF + +++ SWTA+ISG+ +G M+ + VD++ L
Sbjct: 185 GRKEEALELFRILPVKNLYSWTALISGFVQSG-----KGLEAFSVFTEMRRERVDILDPL 239
Query: 357 ------SECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC 410
CA L A GR++H A + + A++DMYAKC + A D+F
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIALGF--DSCVFISNALIDMYAKCSDVIAAKDIFS 297
Query: 411 KTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLV 470
+ + + + S+I G+A HG + A+ L+++M G+ P+ VTFV L+ AC H G V
Sbjct: 298 RMRH--RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFV 355
Query: 471 DEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLS 530
++G++ F+SM+ YG+ P ++HY C++DLLGR GLL EA +LI MPF + W ALLS
Sbjct: 356 EKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
Query: 531 ACKVHGDVELA-KLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQK 589
ACK G ++ ++A + + + + Y++LSN+ A + + R+ + + ++K
Sbjct: 416 ACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRK 475
Query: 590 PPGWSYVEMNGALHKFLAGDKSHP 613
PG S VE+ F AG+ SHP
Sbjct: 476 DPGHSSVEVRKETEVFYAGETSHP 499
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 199/475 (41%), Gaps = 71/475 (14%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLF 78
L + RT+ A + AH+V G+ L+ L++ + A H+L++F + + D
Sbjct: 12 LCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCG-AASHALQVFDEMPHRDHI 70
Query: 79 LWNAIIKA-HSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCH 137
W +++ A + + + F F L+K+CAN + G Q+HCH
Sbjct: 71 AWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCH 130
Query: 138 LVKSRFHSHVFVANALLHFY----------CVFRD---------------------AHNA 166
+ S + + V ++L+ Y VF A
Sbjct: 131 FIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEA 190
Query: 167 YKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRP-DEYTLVTLLSACSS 225
++F +PV++ S+ +I+GFV++G+ + V +MR + D L +++ AC++
Sbjct: 191 LELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACAN 250
Query: 226 LEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAA 285
L GRQVHGLV LG + NAL+DMYAKC + A+ + S +R+ V +
Sbjct: 251 LAASIAGRQVHGLVI-ALG-FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD--VVS 306
Query: 286 WTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXM 345
WTSL+ A G E A L+D M SH +
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDM--------------VSHG-----------------V 335
Query: 346 KPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTA 405
KP+EV V + C+ +G +E GR + + +TC ++D+ + G +D A
Sbjct: 336 KPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC-LLDLLGRSGLLDEA 394
Query: 406 LDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVAL 460
++ T + +++S G G+ I + + + + D T++ L
Sbjct: 395 ENLI-HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILL 448
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/666 (26%), Positives = 310/666 (46%), Gaps = 75/666 (11%)
Query: 29 ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS 88
L + A + GL ++++ ++L+S ++ + + + ++F + + WNA+I+ ++
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK-MEAAAKVFEALEEKNDVFWNAMIRGYA 404
Query: 89 LSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVF 148
+ FTF LL +CA + +G Q H ++K + ++F
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
V NAL+ Y +A ++FE+M RD V++N +I +V+ + + M G
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGL------------------VYRELGCLGD-- 248
I D L + L AC+ + G+QVH L +Y + G + D
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 249 ---------NALLVNALVDMYAKCGCLE----LAERVVSGVRNGKSVVAAWT-------- 287
+ + +NAL+ Y++ E E + GV + A
Sbjct: 585 KVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Query: 288 -------------------------SLVSAYA-SRGDVEVARRLFDQMGERDVVSWTAMI 321
SL+ Y SRG E + + +V WT M+
Sbjct: 645 LTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMM 704
Query: 322 SGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWH 381
SG+S G+ + PD+ V L C+ L +L GR IH + +H
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH----SLIFH 760
Query: 382 CGQNGG--FTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAI 439
+ + ++DMYAKCG + + VF + + + + +NS+I+G A +G + A+
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR-RSNVVSWNSLINGYAKNGYAEDAL 819
Query: 440 TLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDL 499
+F+ MR ++PD +TF+ +L AC H+G V +G+K FE M YG+ +++H C+VDL
Sbjct: 820 KIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDL 879
Query: 500 LGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARY 559
LGR G L EA I K +A +W +LL AC++HGD +++ ++L+ +E + + Y
Sbjct: 880 LGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAY 939
Query: 560 VMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATE 619
V+LSN+ A ++A ++RK + + G++K PG+S++++ H F AGDKSH E E
Sbjct: 940 VLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIE 999
Query: 620 LMLRDI 625
+ L D+
Sbjct: 1000 MFLEDL 1005
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 210/487 (43%), Gaps = 54/487 (11%)
Query: 62 LRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKS 121
L+ + LF +++PD+ WN +I H T +L +
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 122 CANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSY 181
LGL +H +K S+++V ++L+ Y A KVFE + ++ V +
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 182 NMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYR 241
N MI G+ G + M++ DM+ G D++T +LLS C++ D +G Q H ++ +
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 242 ELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEV 301
+ L N + NALVDMYAKCG L E
Sbjct: 457 KK--LAKNLFVGNALVDMYAKCGAL---------------------------------ED 481
Query: 302 ARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECAR 361
AR++F++M +RD V+W +I Y + D + + L C
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Query: 362 LGALELGRRIHLKYAAENWHCGQNGGF--TCAVVDMYAKCGSIDTALDVFCKTSKDKKTT 419
+ L G+++H CG + +++DMY+KCG I A VF +S + +
Sbjct: 542 VHGLYQGKQVHCLSV----KCGLDRDLHTGSSLIDMYSKCGIIKDARKVF--SSLPEWSV 595
Query: 420 ILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFES 479
+ N++I+G + + L + A+ LF+EM G+ P +TF ++ AC + G + F
Sbjct: 596 VSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ-FHG 653
Query: 480 MSTVYGVNPQMEHYGCVVDLLG-----RGGLLSEAYHLILNMPFKANAVIWRALLSACKV 534
T G + + E+ G + LLG RG ++EA L + + V+W ++S
Sbjct: 654 QITKRGFSSEGEYLG--ISLLGMYMNSRG--MTEACALFSELSSPKSIVLWTGMMSGHSQ 709
Query: 535 HGDVELA 541
+G E A
Sbjct: 710 NGFYEEA 716
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/587 (22%), Positives = 249/587 (42%), Gaps = 63/587 (10%)
Query: 5 LASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRH 64
L S +D + LA + R I +A + + ++ G+ + L A++ +A + + +
Sbjct: 58 LFKSRKVFDEMPQRLALALR-IGKA--VHSKSLILGIDSEGRLGNAIVDLYAKCAQ-VSY 113
Query: 65 SLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCAN 124
+ + F + D+ WN+++ +S FTF +L +CA
Sbjct: 114 AEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCAR 172
Query: 125 ARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMM 184
G Q+HC ++K + + AL+ Y +A +VFE + + V + +
Sbjct: 173 ETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCL 232
Query: 185 INGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELG 244
+G+V+AG ++ V MR G RPD VT+++ L + R L++ E+
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR----LLFGEMS 288
Query: 245 CLGDNALLVNALVDMYAKCGCLELAERVV-----SGVRNGKSVVAA-------------- 285
+ + N ++ + K GC +A S V++ +S + +
Sbjct: 289 --SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 286 ------------------WTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
+SLVS Y+ +E A ++F+ + E++ V W AMI GY+H
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH----LKYAAENWHCG 383
G D+ + LS CA LE+G + H K A+N G
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 384 QNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFE 443
A+VDMYAKCG+++ A +F + + + +N+II A LF+
Sbjct: 467 N------ALVDMYAKCGALEDARQIFERMC--DRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 444 EMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRG 503
M L G+V DG + L AC H + +GK+ +S G++ + ++D+ +
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 504 GLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLA 550
G++ +A + ++P + + V AL++ ++E A + QE+L
Sbjct: 578 GIIKDARKVFSSLP-EWSVVSMNALIAGYS-QNNLEEAVVLFQEMLT 622
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 218/546 (39%), Gaps = 84/546 (15%)
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
+ NA++ Y A K F+ + +D ++N M++ + G+ G ++ +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
I P+++T +LS C+ + GRQ+H + + +G L N+ ALVDMYAKC +
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MG-LERNSYCGGALVDMYAKCDRISD 213
Query: 269 AERVVSGVRNGKSVVAAWTSLVSAYASRG------------------------------- 297
A RV + + +V WT L S Y G
Sbjct: 214 ARRVFEWIVDPNTV--CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTY 271
Query: 298 ----DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
++ AR LF +M DVV+W MISG+ G +K +
Sbjct: 272 IRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 354 AALSECARLGALELGRRIHLKYA----AENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
+ LS + L+LG +H + A N + G ++V MY+KC ++ A VF
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS------SLVSMYSKCEKMEAAAKVF 385
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+ ++K + +N++I G AH+G + LF +M+ G D TF +LL C S
Sbjct: 386 --EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHD 443
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
++ G + F S+ + + +VD+ + G L +A + M + N V W ++
Sbjct: 444 LEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTII 501
Query: 530 -SACKVHGDVELAKL-------------AC--QELLAVEHDHGARYVMLSNMLA-----D 568
S + + E L AC L A H HG + L+ D
Sbjct: 502 GSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLD 561
Query: 569 MDQHDEAASVRKAIDNVGIQKP--------PGWSYVEMNGALHKFLAGDKSHPEAKATEL 620
D H +S+ GI K P WS V MN + + + E+
Sbjct: 562 RDLH-TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEM 620
Query: 621 MLRDIN 626
+ R +N
Sbjct: 621 LTRGVN 626
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 174/408 (42%), Gaps = 40/408 (9%)
Query: 28 QALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH 87
Q Q+ V GL DL ++LI + + ++ + ++FS + + NA+I +
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMY-SKCGIIKDARKVFSSLPEWSVVSMNALIAGY 605
Query: 88 SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSH- 146
S N TF ++++C + LG Q H + K F S
Sbjct: 606 S-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEG 664
Query: 147 VFVANALLHFYCVFRDAHNAYKVFEQMPV-RDCVSYNMMINGFVRAGRAGCSMKVLGDMR 205
++ +LL Y R A +F ++ + V + M++G + G ++K +MR
Sbjct: 665 EYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR 724
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC 265
G+ PD+ T VT+L CS L R GR +H L++ L + L N L+DMYAKCG
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL--DELTSNTLIDMYAKCGD 782
Query: 266 LELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYS 325
++ + +V +R +S V +W SL++ YA G E A ++FD M + ++
Sbjct: 783 MKGSSQVFDEMRR-RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM---------- 831
Query: 326 HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQN 385
PDE+ + L+ C+ G + GR+I + +
Sbjct: 832 ---------------------PDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARV 870
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG 433
C +VD+ + G + A D F + K L++S++ HG
Sbjct: 871 DHVAC-MVDLLGRWGYLQEA-DDFIEAQNLKPDARLWSSLLGACRIHG 916
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/591 (29%), Positives = 288/591 (48%), Gaps = 44/591 (7%)
Query: 31 QIQAHMVVTGLHHDLFLS-TALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSL 89
QI MV G D + T+L++ +A +R ++ +F + D+F +NA+I +
Sbjct: 81 QIHGFMVRKGFLDDSPRAGTSLVNMYAKCG-LMRRAVLVFG-GSERDVFGYNALISGFVV 138
Query: 90 SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFV 149
+ + +TFP LLK ++A ++H K F S +V
Sbjct: 139 NGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYV 197
Query: 150 ANALLHFYCVFRDAHNAYKVFEQMPVRD-CVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
+ L+ Y F +A KVF+++P RD V +N ++NG+ + R ++ V MR G
Sbjct: 198 GSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG 257
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
+ +T+ ++LSA + D GR +HGL + G + ++ NAL+DMY K
Sbjct: 258 VGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGS--GSDIVVSNALIDMYGK------ 309
Query: 269 AERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG 328
+ W +E A +F+ M ERD+ +W +++ + + G
Sbjct: 310 ---------------SKW------------LEEANSIFEAMDERDLFTWNSVLCVHDYCG 342
Query: 329 YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENW--HCGQNG 386
++PD V + L C RL +L GR IH N
Sbjct: 343 DHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNE 402
Query: 387 GFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR 446
+++DMY KCG + A VF S K + +N +I+G G+ A+ +F M
Sbjct: 403 FIHNSLMDMYVKCGDLRDARMVF--DSMRVKDSASWNIMINGYGVQSCGELALDMFSCMC 460
Query: 447 LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLL 506
G+ PD +TFV LL AC HSG ++EG+ M TVY + P +HY CV+D+LGR L
Sbjct: 461 RAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKL 520
Query: 507 SEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNML 566
EAY L ++ P N V+WR++LS+C++HG+ +LA +A + L +E +H YV++SN+
Sbjct: 521 EEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVY 580
Query: 567 ADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKA 617
+ +++E VR A+ ++K PG S++ + +H F G+++HPE K+
Sbjct: 581 VEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKS 631
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 26 IQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIK 85
I I V TG D+ +S ALI + + + L + +F + DLF WN+++
Sbjct: 278 IDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKS-KWLEEANSIFEAMDERDLFTWNSVLC 336
Query: 86 AHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKS---- 141
H +H T +L +C + G ++H +++ S
Sbjct: 337 VHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLN 396
Query: 142 RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVL 201
R S+ F+ N+L+ Y D +A VF+ M V+D S+N+MING+ ++ +
Sbjct: 397 RKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMF 456
Query: 202 GDMRGFGIRPDEYTLVTLLSACS 224
M G++PDE T V LL ACS
Sbjct: 457 SCMCRAGVKPDEITFVGLLQACS 479
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
+A L CA+ G++IH + + ++V+MYAKCG + A+ VF +
Sbjct: 64 IATLQRCAQRKDYVSGQQIH-GFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS 122
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
+D YN++ISG +G A+ + EMR G++PD TF +LL L D
Sbjct: 123 ERD---VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSD- 178
Query: 473 GKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA 531
K ++ G + +V + + +A + +P + ++V+W AL++
Sbjct: 179 -VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 182/628 (28%), Positives = 313/628 (49%), Gaps = 33/628 (5%)
Query: 3 HPLASSSASYDRVKALLASSCRTI--QQALQIQAHMVV-TGLHHDLFLSTALISFFATNH 59
P + A+ V + AS + I + QI +++V + L +F+ +L+SF+
Sbjct: 218 EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277
Query: 60 RALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPN--HAFXXXXXXXXXXXXXXXXXFTFPY 117
R + + LF+ + + DL WN +I ++ + AF T
Sbjct: 278 R-IEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSV-TIIS 335
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVF----VANALLHFYCVFRDAHNAYKVFEQM 173
+L CA G ++H ++++ HS++ V NAL+ FY F D AY F M
Sbjct: 336 ILPVCAQLTDLASGKEIHSYILR---HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM 392
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
+D +S+N +++ F + + + +L + I D T+++LL C +++ +
Sbjct: 393 STKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVK 452
Query: 234 QVHGLVYRELGCLGDN--ALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVS 291
+VHG + G L D L NAL+D YAKCG +E A ++ G+ +++V+ + SL+S
Sbjct: 453 EVHGYSVKA-GLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVS-YNSLLS 510
Query: 292 AYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVD 351
Y + G + A+ LF +M D+ +W+ M+ Y+ + M+P+ V
Sbjct: 511 GYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVT 570
Query: 352 VVAALSECARLGALELGRRIHLKYAAENWHCGQNGGF-----TCAVVDMYAKCGSIDTAL 406
++ L CA+L +L L R+ H Y GG ++D+YAKCGS+ A
Sbjct: 571 IMNLLPVCAQLASLHLVRQCH-GYIIR-------GGLGDIRLKGTLLDVYAKCGSLKHAY 622
Query: 407 DVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGH 466
VF S ++ +++ ++++G A HG GK A+ ++ M + PD V +L AC H
Sbjct: 623 SVF--QSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCH 680
Query: 467 SGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWR 526
+GL+ +G + ++S+ TV+G+ P ME Y C VDL+ RGG L +AY + MP + NA IW
Sbjct: 681 AGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWG 740
Query: 527 ALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVG 586
LL AC + ++L LL E D +V++SNM A + + +R +
Sbjct: 741 TLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKE 800
Query: 587 IQKPPGWSYVEMNGALHKFLAGDKSHPE 614
++KP G S++E++G + F++GD SHP
Sbjct: 801 MKKPAGCSWLEVDGQRNVFVSGDCSHPR 828
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 169/422 (40%), Gaps = 41/422 (9%)
Query: 47 LSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXX 106
+S ++++ +A R + ++F + + D +WN ++ S+S
Sbjct: 58 VSKSVLNMYAKCRR-MDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFAD 116
Query: 107 XXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAH-N 165
TF +L C + G +H +++K+ V NAL+ Y F +
Sbjct: 117 EPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 166 AYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSS 225
AY F+ + +D VS+N +I GF + + M P+ T+ +L C+S
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 226 LEDQ---RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV 282
++ R GRQ+H V + L + + N+LV Y + G +E A + + R G
Sbjct: 237 MDKNIACRSGRQIHSYVVQR-SWLQTHVFVCNSLVSFYLRVGRIEEAASLFT--RMGSKD 293
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
+ +W +++ YAS + A +LF + + VS
Sbjct: 294 LVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVS-------------------------- 327
Query: 343 XXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSI 402
PD V +++ L CA+L L G+ IH Y + + ++ A++ YA+ G
Sbjct: 328 ----PDSVTIISILPVCAQLTDLASGKEIH-SYILRHSYLLEDTSVGNALISFYARFGDT 382
Query: 403 DTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC 462
A F S K I +N+I+ A + L + + D VT ++LL
Sbjct: 383 SAAYWAFSLMS--TKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLK 440
Query: 463 AC 464
C
Sbjct: 441 FC 442
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 169/424 (39%), Gaps = 48/424 (11%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
F ++K+CA+ G LH + K + V+ ++L+ Y R + K+F QM
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 175 VRDCVSYNMMINGF-VRAGRAGCSMKVLGDMR-GFGIRPDEYTLVTLLSACSSLEDQRVG 232
D V +N+++ G V GR +M+ M +P T +L C L D G
Sbjct: 84 SLDPVVWNIVLTGLSVSCGRE--TMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
+ +H + + L + L+ NALV MYAK G + A
Sbjct: 142 KSMHSYIIK--AGLEKDTLVGNALVSMYAKFGFI----------------------FPDA 177
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
Y + FD + ++DVVSW A+I+G+S +P+ +
Sbjct: 178 YTA----------FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATI 227
Query: 353 VAALSECARLG---ALELGRRIHLKYAAENWHCGQNGGFTC-AVVDMYAKCGSIDTALDV 408
L CA + A GR+IH +W Q F C ++V Y + G I+ A +
Sbjct: 228 ANVLPVCASMDKNIACRSGRQIHSYVVQRSWL--QTHVFVCNSLVSFYLRVGRIEEAASL 285
Query: 409 FCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLV-PDGVTFVALLCACGHS 467
F T K + +N +I+G A + A LF + G V PD VT +++L C
Sbjct: 286 F--TRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQL 343
Query: 468 GLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRA 527
+ GK+ + + ++ R G S AY M K + + W A
Sbjct: 344 TDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNA 402
Query: 528 LLSA 531
+L A
Sbjct: 403 ILDA 406
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 241/436 (55%), Gaps = 13/436 (2%)
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKC 263
MR + PD +T LL + + +G++ H + L L + + +L++MY+ C
Sbjct: 53 MRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQIL--LFGLDKDPFVRTSLLNMYSSC 110
Query: 264 GCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISG 323
G L A+RV +G + AW S+V+AYA G ++ AR+LFD+M ER+V+SW+ +I+G
Sbjct: 111 GDLRSAQRVFDD--SGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLING 168
Query: 324 YSHAGYXXXX-----XXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
Y G ++P+E + LS C RLGALE G+ +H +
Sbjct: 169 YVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHA--YID 226
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
+H + A++DMYAKCGS++ A VF KK Y+++I LA +GL
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVF-NALGSKKDVKAYSAMICCLAMYGLTDEC 285
Query: 439 ITLFEEMRLL-GLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
LF EM + P+ VTFV +L AC H GL++EGK F+ M +G+ P ++HYGC+V
Sbjct: 286 FQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMV 345
Query: 498 DLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGA 557
DL GR GL+ EA I +MP + + +IW +LLS ++ GD++ + A + L+ ++ +
Sbjct: 346 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSG 405
Query: 558 RYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKA 617
YV+LSN+ A + E +R ++ GI K PG SYVE+ G +H+F+ GD+S E++
Sbjct: 406 AYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESER 465
Query: 618 TELMLRDINMGVKSIG 633
ML +I ++ G
Sbjct: 466 IYAMLDEIMQRLREAG 481
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 168/391 (42%), Gaps = 76/391 (19%)
Query: 78 FLWNAIIKA--HSLSPNHAFXXXXXXXXXXXXXXXXXF-TFPYLLKSCANARTPHLGLQL 134
FLWN II+A H++S F TFP+LL S N LG +
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 135 HCHLVKSRFHSHVFVANALLHFYC----------VFRDAH-----------NAY------ 167
H ++ FV +LL+ Y VF D+ NAY
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 168 ----KVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMR------GFGIRPDEYTLV 217
K+F++MP R+ +S++ +ING+V G+ ++ + +M+ F +RP+E+T+
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAF-VRPNEFTMS 203
Query: 218 TLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR 277
T+LSAC L G+ VH Y + + + +L AL+DMYAKCG LE A+RV + +
Sbjct: 204 TVLSACGRLGALEQGKWVHA--YIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 278 NGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXX 337
+ K V A+++++ A G + +LF +M D ++
Sbjct: 262 SKKD-VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNIN--------------------- 299
Query: 338 XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYA 397
P+ V V L C G + G+ + K E + + +VD+Y
Sbjct: 300 ---------PNSVTFVGILGACVHRGLINEGKS-YFKMMIEEFGITPSIQHYGCMVDLYG 349
Query: 398 KCGSIDTALDVFCKTSKDKKTTILYNSIISG 428
+ G I A + F + + +++ S++SG
Sbjct: 350 RSGLIKEA-ESFIASMPMEPDVLIWGSLLSG 379
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 165/598 (27%), Positives = 287/598 (47%), Gaps = 80/598 (13%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
QI H + TG D+ + L++ +A R ++ + W +++ +S +
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
+TFP +L +CA+ +G+Q+HC +VKS F ++++V
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ 265
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
+AL+ Y R+ +A + E M V D VS+N MI G VR G G ++ + G M ++
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 211 PDEYTLVTLLSACS-SLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELA 269
D++T+ ++L+ + S + ++ H L+ + L+ NALVDMYAK
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKT--GYATYKLVNNALVDMYAK------- 376
Query: 270 ERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY 329
RG ++ A ++F+ M E+DV+SWTA+++G +H G
Sbjct: 377 --------------------------RGIMDSALKVFEGMIEKDVISWTALVTGNTHNGS 410
Query: 330 XXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT 389
+ PD++ + LS A L LE G+++H Y + +
Sbjct: 411 YDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLS--VN 468
Query: 390 CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG 449
++V MY KCGS++ A +++NS+ E+R
Sbjct: 469 NSLVTMYTKCGSLEDA-------------NVIFNSM------------------EIR--- 494
Query: 450 LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA 509
D +T+ L+ +GL+++ ++ F+SM TVYG+ P EHY C++DL GR G +
Sbjct: 495 ---DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKV 551
Query: 510 YHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADM 569
L+ M + +A +W+A+L+A + HG++E + A + L+ +E ++ YV LSNM +
Sbjct: 552 EQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAA 611
Query: 570 DQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPE-----AKATELML 622
+ DEAA+VR+ + + I K PG S+VE G +H F++ D+ HP +K E+ML
Sbjct: 612 GRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMML 669
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 13/292 (4%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLW 80
S+CR +Q+ +V +G ++++ +ALI +A R + + L + D+ W
Sbjct: 241 SACRV---GVQVHCCIVKSGFKTNIYVQSALIDMYA-KCREMESARALLEGMEVDDVVSW 296
Query: 81 NAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTP-HLGLQLHCHLV 139
N++I FT P +L A +RT + HC +V
Sbjct: 297 NSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIV 356
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMK 199
K+ + ++ V NAL+ Y +A KVFE M +D +S+ ++ G G ++K
Sbjct: 357 KTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALK 416
Query: 200 VLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDM 259
+ +MR GI PD+ ++LSA + L G+QVHG Y + G + + N+LV M
Sbjct: 417 LFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHG-NYIKSG-FPSSLSVNNSLVTM 474
Query: 260 YAKCGCLELAERVVSG--VRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
Y KCG LE A + + +R+ + WT L+ YA G +E A+R FD M
Sbjct: 475 YTKCGSLEDANVIFNSMEIRD----LITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 174/418 (41%), Gaps = 76/418 (18%)
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
F N ++ Y R +A K+F PV++ +S+N +I+G+ ++G + + +M+
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD 119
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
GI+P+EYTL ++L C+SL G Q+HG + L N +VN L+ MYA+C +
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVN--VVNGLLAMYAQCKRIS 177
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
AE + + K+ V WTS M++GYS
Sbjct: 178 EAEYLFETMEGEKNNV-TWTS-------------------------------MLTGYSQN 205
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG 387
G+ + ++ + L+ CA + A +G ++H C G
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHC--------CIVKSG 257
Query: 388 FTC------AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITL 441
F A++DMYAKC +++A + D + +NS+I G GL A+++
Sbjct: 258 FKTNIYVQSALIDMYAKCREMESARALLEGMEVDD--VVSWNSMIVGCVRQGLIGEALSM 315
Query: 442 FEEMRLLGLVPDGVTFVALL------------CACGHSGLVDEGKKPFESMSTVYGVNPQ 489
F M + D T ++L + H +V G ++ ++
Sbjct: 316 FGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA------ 369
Query: 490 MEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA-KLACQ 546
+VD+ + G++ A + M + + + W AL++ +G + A KL C
Sbjct: 370 ------LVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKLFCN 420
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/516 (29%), Positives = 266/516 (51%), Gaps = 39/516 (7%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD 177
+L+ CA H +++ V + N L++ Y A +VF+ M R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
VS+N MI + R ++ + +MR G + E+T+ ++LSAC D +++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 238 LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
L + C+ N + AL+D+YAKCG
Sbjct: 187 LSVK--TCIDLNLYVGTALLDLYAKCGM-------------------------------- 212
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS 357
++ A ++F+ M ++ V+W++M++GY ++ ++ + + +
Sbjct: 213 -IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 358 ECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKK 417
C+ L AL G+++H + G N + VDMYAKCGS+ + +F + +K
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGF--GSNVFVASSAVDMYAKCGSLRESYIIFSEV--QEK 327
Query: 418 TTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPF 477
L+N+IISG A H K + LFE+M+ G+ P+ VTF +LL CGH+GLV+EG++ F
Sbjct: 328 NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF 387
Query: 478 ESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGD 537
+ M T YG++P + HY C+VD+LGR GLLSEAY LI ++PF A IW +LL++C+V+ +
Sbjct: 388 KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKN 447
Query: 538 VELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVE 597
+ELA++A ++L +E ++ +V+LSN+ A Q +E A RK + + ++K G S+++
Sbjct: 448 LELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWID 507
Query: 598 MNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+ +H F G+ HP + L ++ + + G
Sbjct: 508 IKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 543
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 127/275 (46%), Gaps = 3/275 (1%)
Query: 37 VVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFX 96
V T + +L++ TAL+ +A ++ ++++F + + W++++ + + N+
Sbjct: 189 VKTCIDLNLYVGTALLDLYAKCG-MIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 97 XXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHF 156
FT ++ +C+N G Q+H + KS F S+VFVA++ +
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307
Query: 157 YCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTL 216
Y +Y +F ++ ++ +N +I+GF + R M + M+ G+ P+E T
Sbjct: 308 YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTF 367
Query: 217 VTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV 276
+LLS C GR+ L+ G L N + + +VD+ + G L A ++ +
Sbjct: 368 SSLLSVCGHTGLVEEGRRFFKLMRTTYG-LSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 277 RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE 311
+ + W SL+++ ++E+A +++ E
Sbjct: 427 PFDPT-ASIWGSLLASCRVYKNLELAEVAAEKLFE 460
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 158/476 (33%), Positives = 252/476 (52%), Gaps = 51/476 (10%)
Query: 153 LLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPD 212
L C+ +A KVF +M ++ V + MING++ + ++ R F + P+
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYL------LNKDLVSARRYFDLSPE 87
Query: 213 EYTLV--TLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAE 270
++ T++S Y E+G N L +L D + C +
Sbjct: 88 RDIVLWNTMISG-----------------YIEMG----NMLEARSLFD---QMPCRD--- 120
Query: 271 RVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYX 330
V +W +++ YA+ GD+E R+FD M ER+V SW +I GY+ G
Sbjct: 121 ------------VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRV 168
Query: 331 XXXXXXXXXXXXX-XMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT 389
+ P++ + LS CA+LGA + G+ +H KY + +
Sbjct: 169 SEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH-KYGETLGYNKVDVNVK 227
Query: 390 CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG 449
A++DMY KCG+I+ A++VF ++ I +N++I+GLA HG G A+ LF EM+ G
Sbjct: 228 NALIDMYGKCGAIEIAMEVF--KGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSG 285
Query: 450 LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA 509
+ PD VTFV +LCAC H GLV++G F SM T + + P++EH GCVVDLL R G L++A
Sbjct: 286 ISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQA 345
Query: 510 YHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADM 569
I MP KA+AVIW LL A KV+ V++ ++A +EL+ +E + A +VMLSN+ D
Sbjct: 346 VEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDA 405
Query: 570 DQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDI 625
+ D+AA ++ A+ + G +K G S++E + L KF + + HP + + +LR++
Sbjct: 406 GRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 172/449 (38%), Gaps = 104/449 (23%)
Query: 41 LHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXX 100
+ ++ L T++I+ + N + L + R F L D+ LWN +I + N
Sbjct: 55 VEKNVVLWTSMINGYLLN-KDLVSARRYFDLSPERDIVLWNTMISGYIEMGN-------- 105
Query: 101 XXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVF 160
AR+ L Q+ C V S N +L Y
Sbjct: 106 ---------------------MLEARS--LFDQMPCRDVMS--------WNTVLEGYANI 134
Query: 161 RDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF----GIRPDEYTL 216
D +VF+ MP R+ S+N +I G+ + GR +VLG + + P++ T+
Sbjct: 135 GDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVS---EVLGSFKRMVDEGSVVPNDATM 191
Query: 217 VTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLV---NALVDMYAKCGCLELAERVV 273
+LSAC+ L G+ VH Y E LG N + V NAL+DMY KCG +E+A V
Sbjct: 192 TLVLSACAKLGAFDFGKWVHK--YGE--TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVF 247
Query: 274 SGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXX 333
G++ RR D++SW MI+G + G+
Sbjct: 248 KGIK-------------------------RR--------DLISWNTMINGLAAHGHGTEA 274
Query: 334 XXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR------IHLKYAAENWHCGQNGG 387
+ PD+V V L C +G +E G E HCG
Sbjct: 275 LNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCG---- 330
Query: 388 FTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRL 447
VVD+ ++ G + A++ F K +++ +++ + EE L
Sbjct: 331 ---CVVDLLSRAGFLTQAVE-FINKMPVKADAVIWATLLGASKVYKKVDIGEVALEE--L 384
Query: 448 LGLVP-DGVTFVALLCACGHSGLVDEGKK 475
+ L P + FV L G +G D+ +
Sbjct: 385 IKLEPRNPANFVMLSNIYGDAGRFDDAAR 413
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 172/591 (29%), Positives = 281/591 (47%), Gaps = 44/591 (7%)
Query: 33 QAHMVVTGLHH--DLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
QAH +V + D+++ T+L+ + + L++F+ + + + W+ ++ ++
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYC-KAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 91 P--NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVF 148
A + F +L S A LG Q+HC +K+ V
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
++NAL+ Y + A K+F+ R+ ++++ M+ G+ + G + ++K+ M G
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
I+P EYT+V +L+ACS + G+Q+H + + LG L
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK----LGFERHLF--------------- 358
Query: 269 AERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG 328
A T+LV YA G + AR+ FD + ERDV WT++ISGY
Sbjct: 359 ----------------ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNS 402
Query: 329 YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGF 388
+ P++ + + L C+ L LELG+++H + G
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGF--GLEVPI 460
Query: 389 TCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLL 448
A+ MY+KCGS++ VF +T K + +N++ISGL+H+G G A+ LFEEM
Sbjct: 461 GSALSTMYSKCGSLEDGNLVFRRTPN--KDVVSWNAMISGLSHNGQGDEALELFEEMLAE 518
Query: 449 GLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSE 508
G+ PD VTFV ++ AC H G V+ G F MS G++P+++HY C+VDLL R G L E
Sbjct: 519 GMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKE 578
Query: 509 AYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLAD 568
A I + +WR LLSACK HG EL A ++L+A+ + YV LS +
Sbjct: 579 AKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTA 638
Query: 569 MDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATE 619
+ + + V K + G+ K G S++E+ H F+ GD HP + T+
Sbjct: 639 LGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETK 689
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 238/546 (43%), Gaps = 69/546 (12%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLW 80
S R + + ++ TG + + L++F+A + L + +F+ + D+ W
Sbjct: 25 SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGK-LAKAHSIFNAIICKDVVSW 83
Query: 81 NAIIKAHS----LSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHC 136
N++I +S +S ++ +T + K+ ++ ++ +G Q H
Sbjct: 84 NSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA-YTLAGIFKAESSLQSSTVGRQAHA 142
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC 196
+VK ++V +L+ YC + KVF MP R+ +++ M++G+ GR
Sbjct: 143 LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 197 SMKVLGDMRGFGIRPDE------YTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNA 250
++KV +R E Y +LS+ ++ +GRQ+H + + G LG A
Sbjct: 203 AIKVF----NLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKN-GLLGFVA 257
Query: 251 LLVNALVDMYAKCGCLELAERVV--SGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQ 308
L NALV MY+KC L A ++ SG RN W+++V+ Y+ G+ A +LF +
Sbjct: 258 -LSNALVTMYSKCESLNEACKMFDSSGDRNS----ITWSAMVTGYSQNGESLEAVKLFSR 312
Query: 309 MGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
M +KP E +V L+ C+ + LE G
Sbjct: 313 M-------------------------------FSAGIKPSEYTIVGVLNACSDICYLEEG 341
Query: 369 RRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF-CKTSKDKKTTILYNS 424
+++H LK E ++ T A+VDMYAK G + A F C +D L+ S
Sbjct: 342 KQLHSFLLKLGFE-----RHLFATTALVDMYAKAGCLADARKGFDCLQERD---VALWTS 393
Query: 425 IISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVY 484
+ISG + + A+ L+ M+ G++P+ T ++L AC ++ GK+ + +
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ-VHGHTIKH 452
Query: 485 GVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLA 544
G ++ + + + G L + + P K + V W A++S +G + A
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK-DVVSWNAMISGLSHNGQGDEALEL 511
Query: 545 CQELLA 550
+E+LA
Sbjct: 512 FEEMLA 517
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 216/364 (59%), Gaps = 14/364 (3%)
Query: 276 VRNG-KSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXX 334
+R+G S++ SL+ YA+ GDV A ++FD+M E+D+V+W ++I+G++ G
Sbjct: 15 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 74
Query: 335 XXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYA----AENWHCGQNGGFTC 390
+KPD +V+ LS CA++GAL LG+R+H+ N H
Sbjct: 75 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN------ 128
Query: 391 AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR-LLG 449
++D+YA+CG ++ A +F + K ++ + S+I GLA +G GK AI LF+ M G
Sbjct: 129 VLLDLYARCGRVEEAKTLFDEMVD--KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 450 LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA 509
L+P +TFV +L AC H G+V EG + F M Y + P++EH+GC+VDLL R G + +A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 510 YHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADM 569
Y I +MP + N VIWR LL AC VHGD +LA+ A ++L +E +H YV+LSNM A
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 306
Query: 570 DQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGV 629
+ + +RK + G++K PG S VE+ +H+FL GDKSHP++ A L+++ +
Sbjct: 307 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRL 366
Query: 630 KSIG 633
+S G
Sbjct: 367 RSEG 370
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 160/328 (48%), Gaps = 46/328 (14%)
Query: 130 LGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFV 189
LG +H +++S F S ++V N+LLH Y D +AYKVF++MP +D V++N +INGF
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 190 RAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDN 249
G+ ++ + +M GI+PD +T+V+LLSAC+ + +G++VH VY L N
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH--VYMIKVGLTRN 123
Query: 250 ALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
N L+D+YA+CG +E A+ + + + SV +WTSL+ A G + A LF M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV--SWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 310 GERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG- 368
+ + P E+ V L C+ G ++ G
Sbjct: 182 ESTE------------------------------GLLPCEITFVGILYACSHCGMVKEGF 211
Query: 369 ---RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSI 425
RR+ +Y E + F C +VD+ A+ G + A + + K+ + +++ ++
Sbjct: 212 EYFRRMREEYKIE----PRIEHFGC-MVDLLARAGQVKKAYE-YIKSMPMQPNVVIWRTL 265
Query: 426 ISGLAHHGLGKYAITLFEEMRLLGLVPD 453
+ HG A F +++L L P+
Sbjct: 266 LGACTVHGDSDLA--EFARIQILQLEPN 291
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 118/282 (41%), Gaps = 22/282 (7%)
Query: 32 IQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSP 91
I + ++ +G +++ +L+ +A N + + ++F + DL WN++I + +
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYA-NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENG 68
Query: 92 NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVAN 151
FT LL +CA LG ++H +++K ++ +N
Sbjct: 69 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 128
Query: 152 ALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF-GIR 210
LL Y A +F++M ++ VS+ +I G G ++++ M G+
Sbjct: 129 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 188
Query: 211 PDEYTLVTLLSACS-------SLEDQRVGRQVHGLVYR--ELGCLGDNALLVNALVDMYA 261
P E T V +L ACS E R R+ + + R GC +VD+ A
Sbjct: 189 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC----------MVDLLA 238
Query: 262 KCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVAR 303
+ G ++ A + + +VV W +L+ A GD ++A
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVV-IWRTLLGACTVHGDSDLAE 279
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/565 (29%), Positives = 279/565 (49%), Gaps = 50/565 (8%)
Query: 72 VTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLG 131
V D+F WN++I + S + A +FP +K+C++ G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRA 191
Q H + S +FV++AL+ Y +A KVF+++P R+ VS+ MI G+
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 192 GRAGCSMKVLGDM------RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGC 245
G A ++ + D+ + D LV+++SACS + + + +H V +
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR--G 213
Query: 246 LGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRL 305
+ N L+D YAK G G V VAR++
Sbjct: 214 FDRGVSVGNTLLDAYAKGG-------------------------------EGGVAVARKI 242
Query: 306 FDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKP-DEVDVVAALSECARLGA 364
FDQ+ ++D VS+ +++S Y+ +G + + + + L + GA
Sbjct: 243 FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGA 302
Query: 365 LELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL 421
L +G+ IH ++ E+ + +++DMY KCG ++TA F + K
Sbjct: 303 LRIGKCIHDQVIRMGLED-----DVIVGTSIIDMYCKCGRVETARKAFDRMKN--KNVRS 355
Query: 422 YNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMS 481
+ ++I+G HG A+ LF M G+ P+ +TFV++L AC H+GL EG + F +M
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415
Query: 482 TVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA 541
+GV P +EHYGC+VDLLGR G L +AY LI M K +++IW +LL+AC++H +VELA
Sbjct: 416 GRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
Query: 542 KLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGA 601
+++ L ++ + Y++LS++ AD + + VR + N G+ KPPG+S +E+NG
Sbjct: 476 EISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGE 535
Query: 602 LHKFLAGDKSHPEAKATELMLRDIN 626
+H FL GD+ HP+ + L ++N
Sbjct: 536 VHVFLIGDEEHPQREKIYEFLAELN 560
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 152/321 (47%), Gaps = 18/321 (5%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLW 80
SS I Q V G D+F+S+ALI ++T + L + ++F + ++ W
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRNIVSW 145
Query: 81 NAIIKAHSLSPN--HAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANA--RTPHLGL--QL 134
++I+ + L+ N A F L S +A R P GL +
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 135 HCHLVKSRFHSHVFVANALLHFYCVFRDAHNAY--KVFEQMPVRDCVSYNMMINGFVRAG 192
H ++K F V V N LL Y + A K+F+Q+ +D VSYN +++ + ++G
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 193 RAGCSMKVLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNAL 251
+ + +V + + + + TL T+L A S R+G+ +H V R +G L D+ +
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MG-LEDDVI 323
Query: 252 LVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE 311
+ +++DMY KCG +E A + ++N V +WT++++ Y G A LF M +
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKN--VRSWTAMIAGYGMHGHAAKALELFPAMID 381
Query: 312 RDV----VSWTAMISGYSHAG 328
V +++ ++++ SHAG
Sbjct: 382 SGVRPNYITFVSVLAACSHAG 402
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 17/251 (6%)
Query: 67 RLFSLVTNPDLFLWNAIIKAHSLS--PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCAN 124
++F + + D +N+I+ ++ S N AF T +L + ++
Sbjct: 241 KIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNA-ITLSTVLLAVSH 299
Query: 125 ARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMM 184
+ +G +H +++ V V +++ YC A K F++M ++ S+ M
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 185 INGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYREL- 243
I G+ G A ++++ M G+RP+ T V++L+ACS G V G +
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS-----HAGLHVEGWRWFNAM 414
Query: 244 -GCLGDNALL--VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVE 300
G G L +VD+ + G L+ A ++ ++ + W+SL++A +VE
Sbjct: 415 KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSI-IWSSLLAACRIHKNVE 473
Query: 301 VAR----RLFD 307
+A RLF+
Sbjct: 474 LAEISVARLFE 484
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 158/452 (34%), Positives = 245/452 (54%), Gaps = 21/452 (4%)
Query: 166 AYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSS 225
A+++F+++P D SYN+M++ +VR + M F T++T +
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM-PFKDAASWNTMITGYARRGE 170
Query: 226 LEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERV--VSGVRNGKSVV 283
+E R L Y + N + NA++ Y +CG LE A V+ VR V
Sbjct: 171 MEKAR------ELFY---SMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----V 217
Query: 284 AAWTSLVSAYASRGDVEVARRLFDQMG-ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
AWT++++ Y VE+A +F M +++V+W AMISGY
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 343 XXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSI 402
++P+ + +AL C+ L AL+LGR+IH + +++ C T +++ MY KCG +
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIH-QIVSKSTLCNDVTALT-SLISMYCKCGEL 335
Query: 403 DTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC 462
A +F KK + +N++ISG A HG A+ LF EM + PD +TFVA+L
Sbjct: 336 GDAWKLF--EVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLL 393
Query: 463 ACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANA 522
AC H+GLV+ G FESM Y V PQ +HY C+VDLLGR G L EA LI +MPF+ +A
Sbjct: 394 ACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHA 453
Query: 523 VIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAI 582
++ LL AC+VH +VELA+ A ++LL + + A YV L+N+ A ++ ++ A VRK +
Sbjct: 454 AVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRM 513
Query: 583 DNVGIQKPPGWSYVEMNGALHKFLAGDKSHPE 614
+ K PG+S++E+ +H F + D+ HPE
Sbjct: 514 KESNVVKVPGYSWIEIRNKVHHFRSSDRIHPE 545
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 40/214 (18%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM------ 204
NA++ Y D A F+ PVR V++ MI G+++A + + + DM
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 205 -------RGF-------------------GIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
G+ GIRP+ L + L CS L ++GRQ+H +
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 239 VYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGD 298
V + C ++ + +L+ MY KCG L A ++ ++ K V AW +++S YA G+
Sbjct: 310 VSKSTLC--NDVTALTSLISMYCKCGELGDAWKLFEVMK--KKDVVAWNAMISGYAQHGN 365
Query: 299 VEVA----RRLFDQMGERDVVSWTAMISGYSHAG 328
+ A R + D D +++ A++ +HAG
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 119/310 (38%), Gaps = 38/310 (12%)
Query: 49 TALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXX 108
TA+I+ + + + N +L WNA+I + +
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 109 XXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYK 168
L C+ LG Q+H + KS + V +L+ YC + +A+K
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 169 VFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLED 228
+FE M +D V++N MI+G+ + G A ++ + +M IRPD T V +L AC+
Sbjct: 341 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Query: 229 QRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV------------ 276
+G + R+ + +VD+ + G LE A +++ +
Sbjct: 401 VNIGMAYFESMVRDYK-VEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTL 459
Query: 277 ----RNGKSV-----------------VAAWTSLVSAYASRGDVEVARRLFDQMGERDVV 315
R K+V A + L + YAS+ E R+ +M E +VV
Sbjct: 460 LGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
Query: 316 SWTAMISGYS 325
+ GYS
Sbjct: 520 K----VPGYS 525
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 252/482 (52%), Gaps = 45/482 (9%)
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHN----AYKVFEQMPVRDCVSYNMMING 187
+Q+ + +KS FVA L++F C + A +FE M D V +N M G
Sbjct: 46 MQIQAYAIKSHIEDVSFVAK-LINF-CTESPTESSMSYARHLFEAMSEPDIVIFNSMARG 103
Query: 188 FVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLG 247
+ R + ++ GI PD YT +LL AC+ + GRQ+H L + LG L
Sbjct: 104 YSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMK-LG-LD 161
Query: 248 DNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
DN + L++MY +C DV+ AR +FD
Sbjct: 162 DNVYVCPTLINMYTECE---------------------------------DVDSARCVFD 188
Query: 308 QMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALEL 367
++ E VV + AMI+GY+ +KP+E+ +++ LS CA LG+L+L
Sbjct: 189 RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDL 248
Query: 368 GRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIIS 427
G+ IH KYA ++ C + A++DM+AKCGS+D A+ +F K K T ++++I
Sbjct: 249 GKWIH-KYAKKHSFC-KYVKVNTALIDMFAKCGSLDDAVSIFEKMRY--KDTQAWSAMIV 304
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVN 487
A+HG + ++ +FE MR + PD +TF+ LL AC H+G V+EG+K F M + +G+
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 488 PQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQE 547
P ++HYG +VDLL R G L +AY I +P ++WR LL+AC H +++LA+ +
Sbjct: 365 PSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSER 424
Query: 548 LLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLA 607
+ ++ HG YV+LSN+ A + + S+RK + + K PG S +E+N +H+F +
Sbjct: 425 IFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFS 484
Query: 608 GD 609
GD
Sbjct: 485 GD 486
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 200/419 (47%), Gaps = 42/419 (10%)
Query: 18 LLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFF--ATNHRALRHSLRLFSLVTNP 75
LL S C ++++ +QIQA+ + + + D+ LI+F + ++ ++ LF ++ P
Sbjct: 34 LLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 76 DLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLH 135
D+ ++N++ + +S N +TFP LLK+CA A+ G QLH
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 136 CHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAG 195
C +K +V+V L++ Y D +A VF+++ V YN MI G+ R R
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 212
Query: 196 CSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN- 254
++ + +M+G ++P+E TL+++LS+C+ L +G+ +H + C + VN
Sbjct: 213 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFC---KYVKVNT 269
Query: 255 ALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV 314
AL+DM+AKCG L+ A + +R + AW++++ AYA+ G E + +F++M +V
Sbjct: 270 ALIDMFAKCGSLDDAVSIFEKMRYKDT--QAWSAMIVAYANHGKAEKSMLMFERMRSENV 327
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLK 374
+PDE+ + L+ C+ G +E GR+ +
Sbjct: 328 -------------------------------QPDEITFLGLLNACSHTGRVEEGRK-YFS 355
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG 433
+ + ++VD+ ++ G+++ A + F T +L+ +++ + H
Sbjct: 356 QMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE-FIDKLPISPTPMLWRILLAACSSHN 413
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 134/292 (45%), Gaps = 7/292 (2%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
+ +++ Q+ + GL ++++ LI+ + T + + +F + P + +NA+
Sbjct: 143 KALEEGRQLHCLSMKLGLDDNVYVCPTLINMY-TECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 84 IKAHSLS--PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKS 141
I ++ PN A T +L SCA + LG +H + K
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNE--ITLLSVLSSCALLGSLDLGKWIHKYAKKH 259
Query: 142 RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVL 201
F +V V AL+ + +A +FE+M +D +++ MI + G+A SM +
Sbjct: 260 SFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMF 319
Query: 202 GDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYA 261
MR ++PDE T + LL+ACS GR+ + + G + + ++VD+ +
Sbjct: 320 ERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP-SIKHYGSMVDLLS 378
Query: 262 KCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD 313
+ G LE A + + + + W L++A +S ++++A ++ +++ E D
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPM-LWRILLAACSSHNNLDLAEKVSERIFELD 429
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 264/548 (48%), Gaps = 54/548 (9%)
Query: 116 PYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPV 175
P L K TP L ++K+ + + N + F+ A QM
Sbjct: 774 PNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQE 833
Query: 176 RDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQV 235
+ YN + GFV S+++ M + P YT +L+ A S R G +
Sbjct: 834 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFA--SRFGESL 891
Query: 236 HGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY-- 293
+++ G G + + L+D Y+ G + A +V + + AWT++VSAY
Sbjct: 892 QAHIWK-FG-FGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDI--AWTTMVSAYRR 947
Query: 294 -----------------------------ASRGDVEVARRLFDQMGERDVVSWTAMISGY 324
G++E A LF+QM +D++SWT MI GY
Sbjct: 948 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 1007
Query: 325 SHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQ 384
S + PDEV + +S CA LG LE+G+ +H+ Y +N
Sbjct: 1008 SQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHM-YTLQN----- 1061
Query: 385 NGGFT------CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
GF A+VDMY+KCGS++ AL VF K K +NSII GLA HG + A
Sbjct: 1062 --GFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK--KNLFCWNSIIEGLAAHGFAQEA 1117
Query: 439 ITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVD 498
+ +F +M + + P+ VTFV++ AC H+GLVDEG++ + SM Y + +EHYG +V
Sbjct: 1118 LKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVH 1177
Query: 499 LLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGAR 558
L + GL+ EA LI NM F+ NAVIW ALL C++H ++ +A++A +L+ +E +
Sbjct: 1178 LFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGY 1237
Query: 559 YVMLSNMLADMDQHDEAASVRKAIDNVGIQKP-PGWSYVEMNGALHKFLAGDKSHPEAKA 617
Y +L +M A+ ++ + A +R + +GI+K PG S + ++ H F A DKSH +
Sbjct: 1238 YFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDE 1297
Query: 618 TELMLRDI 625
L+L +I
Sbjct: 1298 VCLLLDEI 1305
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 111/253 (43%), Gaps = 12/253 (4%)
Query: 62 LRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKS 121
L + LF+ + D+ W +IK +S + + T ++ +
Sbjct: 982 LEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISA 1041
Query: 122 CANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSY 181
CA+ +G ++H + +++ F V++ +AL+ Y A VF +P ++ +
Sbjct: 1042 CAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCW 1101
Query: 182 NMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYR 241
N +I G G A ++K+ M ++P+ T V++ +AC+ GR+ +YR
Sbjct: 1102 NSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRR----IYR 1157
Query: 242 ELGCLGDNALLVN-----ALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASR 296
+ + D +++ N +V +++K G + A ++ + + V W +L+
Sbjct: 1158 SM--IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAV-IWGALLDGCRIH 1214
Query: 297 GDVEVARRLFDQM 309
++ +A F+++
Sbjct: 1215 KNLVIAEIAFNKL 1227
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 175/592 (29%), Positives = 291/592 (49%), Gaps = 45/592 (7%)
Query: 13 DRVKALLA--SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFS 70
+R +ALL S +T+ Q+ A +++ G ++ L ++L + + ++R L + F+
Sbjct: 5 NRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNR-LDFATSSFN 63
Query: 71 LVT--NPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXX--XXXXXFTFPYLLKSCANAR 126
+ + WN I+ +S S + F + +K+C
Sbjct: 64 RIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLG 123
Query: 127 TPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMIN 186
G+ +H +K+ +VA +L+ Y +A KVF+++PVR+ V + +++
Sbjct: 124 LLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMK 183
Query: 187 GFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCL 246
G+++ + ++ MR G+ D TL+ L+ AC ++ +VG+ VHG+ R +
Sbjct: 184 GYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRR-SFI 242
Query: 247 GDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLF 306
+ L +++DMY KC L+ AR+LF
Sbjct: 243 DQSDYLQASIIDMYVKCRLLD---------------------------------NARKLF 269
Query: 307 DQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALE 366
+ +R+VV WT +ISG++ + P++ + A L C+ LG+L
Sbjct: 270 ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLR 329
Query: 367 LGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSII 426
G+ +H Y N FT + +DMYA+CG+I A VF ++ I ++S+I
Sbjct: 330 HGKSVH-GYMIRNGIEMDAVNFT-SFIDMYARCGNIQMARTVF--DMMPERNVISWSSMI 385
Query: 427 SGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGV 486
+ +GL + A+ F +M+ +VP+ VTFV+LL AC HSG V EG K FESM+ YGV
Sbjct: 386 NAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGV 445
Query: 487 NPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQ 546
P+ EHY C+VDLLGR G + EA I NMP K A W ALLSAC++H +V+LA +
Sbjct: 446 VPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAE 505
Query: 547 ELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEM 598
+LL++E + + YV+LSN+ AD + VR+ + G +K G S E+
Sbjct: 506 KLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 245/473 (51%), Gaps = 49/473 (10%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHN---AYKVFEQMPVRDCVSYNMMINGFV 189
Q H ++K+ F A+ L+ F + A+ + ++ + ++N +I +
Sbjct: 57 QAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYA 116
Query: 190 RAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDN 249
+ ++ V +M + PD+Y+ +L AC++ GRQ+HGL + G + D
Sbjct: 117 NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS-GLVTD- 174
Query: 250 ALLVNALVDMYAKCGCLELAERVVS--GVRNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
+ N LV++Y + G E+A +V+ VR+ S W SL+SAY +G V+ AR LFD
Sbjct: 175 VFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS----WNSLLSAYLEKGLVDEARALFD 230
Query: 308 QMGER-------------------------------DVVSWTAMISGYSHAG-YXXXXXX 335
+M ER DVVSW AM++ Y+H G Y
Sbjct: 231 EMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEV 290
Query: 336 XXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGF-TCAVVD 394
KPD +V+ LS CA LG+L G +H+ + H + GF A+VD
Sbjct: 291 FNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYI---DKHGIEIEGFLATALVD 347
Query: 395 MYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDG 454
MY+KCG ID AL+VF TSK +T +NSIIS L+ HGLGK A+ +F EM G P+G
Sbjct: 348 MYSKCGKIDKALEVFRATSKRDVST--WNSIISDLSVHGLGKDALEIFSEMVYEGFKPNG 405
Query: 455 VTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLIL 514
+TF+ +L AC H G++D+ +K FE MS+VY V P +EHYGC+VDLLGR G + EA L+
Sbjct: 406 ITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVN 465
Query: 515 NMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLA 567
+P +++ +LL ACK G +E A+ LL + + Y +SN+ A
Sbjct: 466 EIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYA 518
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 120/280 (42%), Gaps = 24/280 (8%)
Query: 62 LRHSLRLFSLVTNPDLFLWNAIIKAHS-LSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLK 120
++ + +F + D+ WNA++ A++ + + FT +L
Sbjct: 253 VKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLS 312
Query: 121 SCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVS 180
+CA+ + G +H ++ K F+A AL+ Y A +VF RD +
Sbjct: 313 ACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVST 372
Query: 181 YNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACS---SLEDQRVGRQVHG 237
+N +I+ G ++++ +M G +P+ T + +LSAC+ L+ R ++
Sbjct: 373 WNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMS 432
Query: 238 LVYR------ELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVS 291
VYR GC +VD+ + G +E AE +V+ + ++ + SL+
Sbjct: 433 SVYRVEPTIEHYGC----------MVDLLGRMGKIEEAEELVNEIPADEASI-LLESLLG 481
Query: 292 AYASRGDVEVARRLFDQMGE---RDVVSWTAMISGYSHAG 328
A G +E A R+ +++ E RD + M + Y+ G
Sbjct: 482 ACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDG 521
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 263/517 (50%), Gaps = 43/517 (8%)
Query: 146 HVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMR 205
V ++++H YC +A +F++M R+ +++ MI+G+ +AG + MR
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Query: 206 GFG-IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCG 264
G ++ + TL + AC R G Q+HGLV R L + L N+L+ MY+K G
Sbjct: 267 QEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRM--PLEFDLFLGNSLMSMYSKLG 324
Query: 265 CLELAERVVSGVRNGKSV-----------------------------VAAWTSLVSAYAS 295
+ A+ V ++N SV + +WT ++ ++
Sbjct: 325 YMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSG 384
Query: 296 RGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAA 355
+G++ LF M E+D ++WTAMIS + GY + P+ +
Sbjct: 385 KGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSV 444
Query: 356 LSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD 415
LS A L L G +IH + N + ++V MY KCG+ + A +F S+
Sbjct: 445 LSATASLADLIEGLQIHGRVVKMN--IVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE- 501
Query: 416 KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKK 475
+ YN++ISG +++G GK A+ LF + G P+GVTF+ALL AC H G VD G K
Sbjct: 502 -PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK 560
Query: 476 PFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVH 535
F+SM + Y + P +HY C+VDLLGR GLL +A +LI MP K ++ +W +LLSA K H
Sbjct: 561 YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTH 620
Query: 536 GDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSY 595
V+LA+LA ++L+ +E D YV+LS + + + ++ + + + I+K PG S+
Sbjct: 621 LRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSW 680
Query: 596 VEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSI 632
+ + G +H FLAGD+S +L L +I +K I
Sbjct: 681 IILKGEVHNFLAGDES-------QLNLEEIGFTLKMI 710
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%)
Query: 66 LRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANA 125
+ LF ++ D W A+I A + + +TF +L + A+
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 126 RTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMI 185
GLQ+H +VK + + V N+L+ YC + ++AYK+F + + VSYN MI
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMI 511
Query: 186 NGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSAC 223
+G+ G ++K+ + G P+ T + LLSAC
Sbjct: 512 SGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC 549
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 120/310 (38%), Gaps = 46/310 (14%)
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSL------V 290
GL+YR CL N+ L + E + RN T++ +
Sbjct: 10 GLIYRHNICLRCNSTLA------------VSNHEPITQKTRNFLETTTTSTAIFQCNSQI 57
Query: 291 SAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEV 350
S +A G+++ A +F QM R +VSW AMIS Y+ G DE+
Sbjct: 58 SKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVF----------DEM 107
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENWHCG---QNGGFTCAVVDMYAKCGSIDTALD 407
V S A + A+ + + L A E C +N ++ + + G D A
Sbjct: 108 PVRVTTSYNAMITAM-IKNKCDLGKAYE-LFCDIPEKNAVSYATMITGFVRAGRFDEAEF 165
Query: 408 VFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHS 467
++ +T + ++ N ++SG G A+ +F+ M V + V+ +++
Sbjct: 166 LYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGM----AVKEVVSCSSMVHGYCKM 221
Query: 468 GLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM----PFKANAV 523
G + + + F+ M+ + + ++D + G + + L L M K N+
Sbjct: 222 GRIVDARSLFDRMTERNVIT-----WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSN 276
Query: 524 IWRALLSACK 533
+ AC+
Sbjct: 277 TLAVMFKACR 286
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 206/344 (59%), Gaps = 8/344 (2%)
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG-YXXXXXXXXXXXX 341
V +WT+++S YA GD+ A LF+ M ERDV SW A+++ + G +
Sbjct: 193 VVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN 252
Query: 342 XXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGS 401
++P+EV VV LS CA+ G L+L + IH A + + ++VD+Y KCG+
Sbjct: 253 EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHA--FAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 402 IDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL---VPDGVTFV 458
++ A VF SK K+ +NS+I+ A HG + AI +FEEM L + PD +TF+
Sbjct: 311 LEEASSVFKMASK--KSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFI 368
Query: 459 ALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPF 518
LL AC H GLV +G+ F+ M+ +G+ P++EHYGC++DLLGR G EA ++ M
Sbjct: 369 GLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKM 428
Query: 519 KANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASV 578
KA+ IW +LL+ACK+HG ++LA++A + L+A+ ++G M++N+ +M +EA
Sbjct: 429 KADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRA 488
Query: 579 RKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELML 622
RK I + KPPGWS +E++ +H+F + DKSHPE + ++L
Sbjct: 489 RKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMIL 532
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 210/503 (41%), Gaps = 95/503 (18%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLW 80
S R + Q+Q+ M+V+GL H FL L+ F L ++ +F + P+ L+
Sbjct: 32 SKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLY 91
Query: 81 NAIIKAHSLS-PNHAFXXXXXXXXXXXXXXXXX--FTFPYLLKSCANARTPHLGLQLHCH 137
A++ A+S S P HA F +P +LKS + +H H
Sbjct: 92 AAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTH 151
Query: 138 LVKSRFHSHVFVANALLHFYC-VFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC 196
L KS FH +V V ALLH Y A ++F++M R+ VS+ M++G+ R+G
Sbjct: 152 LFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISN 211
Query: 197 SMKVLGDM-----------------RGF---------------GIRPDEYTLVTLLSACS 224
++ + DM G IRP+E T+V +LSAC+
Sbjct: 212 AVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACA 271
Query: 225 SLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVA 284
++ + +H YR L + + N+LVD+Y KCG LE A V K +
Sbjct: 272 QTGTLQLAKGIHAFAYRR--DLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA--SKKSLT 327
Query: 285 AWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXX 344
AW S+++ +A G E A +F++M + ++
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMKLNI----------------------------ND 359
Query: 345 MKPDEVDVVAALSECARLGALELGR--------RIHLKYAAENWHCGQNGGFTCAVVDMY 396
+KPD + + L+ C G + GR R ++ E++ C ++D+
Sbjct: 360 IKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGC---------LIDLL 410
Query: 397 AKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG---LGKYAITLFEEMRLLGLVPD 453
+ G D AL+V T K K ++ S+++ HG L + A+ L+ L P+
Sbjct: 411 GRAGRFDEALEVM-STMKMKADEAIWGSLLNACKIHGHLDLAEVAVK-----NLVALNPN 464
Query: 454 GVTFVALLCAC-GHSGLVDEGKK 475
+VA++ G G +E ++
Sbjct: 465 NGGYVAMMANLYGEMGNWEEARR 487
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 264/512 (51%), Gaps = 38/512 (7%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
+ LLKS N R G Q+H H++++ S+ + +++ Y A +VF+QM
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA 246
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQ 234
V+ V+ ++ G+ +AGRA ++K+ D+ G+ D + +L AC+SLE+ +G+Q
Sbjct: 247 VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQ 306
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
+H V + LG L + LVD Y KC E A R +R V +W++++S Y
Sbjct: 307 IHACVAK-LG-LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV--SWSAIISGYC 362
Query: 295 SRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVA 354
E A + F + ++ ++++ +++ +
Sbjct: 363 QMSQFEEAVKTFKSLRSKN----ASILNSFTY--------------------------TS 392
Query: 355 ALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSK 414
C+ L +G ++H + Q G A++ MY+KCG +D A +VF S
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYG--ESALITMYSKCGCLDDANEVF--ESM 448
Query: 415 DKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
D + + + ISG A++G A+ LFE+M G+ P+ VTF+A+L AC H+GLV++GK
Sbjct: 449 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Query: 475 KPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKV 534
++M Y V P ++HY C++D+ R GLL EA + NMPF+ +A+ W+ LS C
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568
Query: 535 HGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWS 594
H ++EL ++A +EL ++ + A YV+ N+ + +EAA + K ++ ++K S
Sbjct: 569 HKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCS 628
Query: 595 YVEMNGALHKFLAGDKSHPEAKATELMLRDIN 626
+++ G +H+F+ GDK HP+ + L++ +
Sbjct: 629 WIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD 660
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 151/345 (43%), Gaps = 54/345 (15%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
F F +LK+CA+ +LG Q+H + K S V V L+ FY +A + F++
Sbjct: 286 FVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQE 345
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRP-DEYTLVTLLSACSSLEDQRV 231
+ + VS++ +I+G+ + + ++K +R + +T ++ ACS L D +
Sbjct: 346 IREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNI 405
Query: 232 GRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVS 291
G QVH + L + +AL+ MY+KCGCL+ A V + N + AWT+ +S
Sbjct: 406 GGQVHADAIKR--SLIGSQYGESALITMYSKCGCLDDANEVFESMDNPD--IVAWTAFIS 461
Query: 292 AYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVD 351
+A G+ A RLF++M MKP+ V
Sbjct: 462 GHAYYGNASEALRLFEKM-------------------------------VSCGMKPNSVT 490
Query: 352 VVAALSECARLGALELG--------RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSID 403
+A L+ C+ G +E G R+ ++ +++ C ++D+YA+ G +D
Sbjct: 491 FIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDC---------MIDIYARSGLLD 541
Query: 404 TALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLL 448
AL F K + + + +SG H + EE+R L
Sbjct: 542 EALK-FMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQL 585
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 180/469 (38%), Gaps = 83/469 (17%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
+++ L ++C R+ G LH + + V + N +L YC R +A K+F++
Sbjct: 84 YSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDE 143
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
M + VS MI+ + G ++ + M G +P TLL + + G
Sbjct: 144 MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFG 203
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
RQ+H V R C N + +V+MY KCG W LV
Sbjct: 204 RQIHAHVIRAGLC--SNTSIETGIVNMYVKCG---------------------W--LVG- 237
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
A+R+FDQM + V+ T ++ GY+ AG ++ D
Sbjct: 238 ---------AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
L CA L L LG++IH A + G +VD Y KC S ++A F +
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVG--TPLVDFYIKCSSFESACRAFQEI 346
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL-VPDGVTFVALLCAC------- 464
+ + +++IISG + A+ F+ +R + + T+ ++ AC
Sbjct: 347 REPNDVS--WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCN 404
Query: 465 -------------------GHSGLV---------DEGKKPFESMSTVYGVNPQMEHYGCV 496
G S L+ D+ + FESM NP + +
Sbjct: 405 IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-----NPDIVAWTAF 459
Query: 497 VDLLGRGGLLSEAYHLILNM---PFKANAVIWRALLSACKVHGDVELAK 542
+ G SEA L M K N+V + A+L+AC G VE K
Sbjct: 460 ISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 140/332 (42%), Gaps = 11/332 (3%)
Query: 5 LASSSASYDR-VKALLASSCRTIQQ---ALQIQAHMVVTGLHHDLFLSTALISFFATNHR 60
L + +D V +++ +C ++++ QI A + GL ++ + T L+ F+
Sbjct: 276 LVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFY-IKCS 334
Query: 61 ALRHSLRLFSLVTNPDLFLWNAIIKAH-SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLL 119
+ + R F + P+ W+AII + +S FT+ +
Sbjct: 335 SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394
Query: 120 KSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCV 179
++C+ ++G Q+H +K + +AL+ Y +A +VFE M D V
Sbjct: 395 QACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIV 454
Query: 180 SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLV 239
++ I+G G A ++++ M G++P+ T + +L+ACS G+ +
Sbjct: 455 AWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM 514
Query: 240 YRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDV 299
R+ + + ++D+YA+ G L+ A + + + + +W +S + ++
Sbjct: 515 LRKYN-VAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAM-SWKCFLSGCWTHKNL 572
Query: 300 ---EVARRLFDQMGERDVVSWTAMISGYSHAG 328
E+A Q+ D + + Y+ AG
Sbjct: 573 ELGEIAGEELRQLDPEDTAGYVLPFNLYTWAG 604
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/598 (28%), Positives = 273/598 (45%), Gaps = 75/598 (12%)
Query: 69 FSLVTNPDLFLWNAIIKAHSLSP-NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANART 127
F + + D WN +I+ +SLS A T +LK ++
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 128 PHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYN----- 182
LG Q+H ++K F S++ V + LL+ Y +A KVF + R+ V YN
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 183 -------------------------MMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLV 217
MI G + G A +++ +M+ G++ D+Y
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 218 TLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR 277
++L AC L G+Q+H + R D+ + +AL+DMY KC CL A+ V
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRT--NFQDHIYVGSALIDMYCKCKCLHYAKTV----- 327
Query: 278 NGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXX 337
FD+M +++VVSWTAM+ GY G
Sbjct: 328 ----------------------------FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 338 XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYA 397
+ PD + A+S CA + +LE G + H K + ++V +Y
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG--LIHYVTVSNSLVTLYG 417
Query: 398 KCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTF 457
KCG ID + +F + + + + +++S A G I LF++M GL PDGVT
Sbjct: 418 KCGDIDDSTRLF--NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 458 VALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP 517
++ AC +GLV++G++ F+ M++ YG+ P + HY C++DL R G L EA I MP
Sbjct: 476 TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Query: 518 FKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAAS 577
F +A+ W LLSAC+ G++E+ K A + L+ ++ H A Y +LS++ A + D A
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 595
Query: 578 VRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHP-----EAKATELMLRDINMGVK 630
+R+ + ++K PG S+++ G LH F A D+S P AK EL + I+ G K
Sbjct: 596 LRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYK 653
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 116/280 (41%), Gaps = 45/280 (16%)
Query: 230 RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSL 289
R + +HG + R L L N +V YA A RV R + + +W +L
Sbjct: 23 RYVKMIHGNIIRALPY--PETFLYNNIVHAYALMKSSTYARRVFD--RIPQPNLFSWNNL 78
Query: 290 VSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYX-XXXXXXXXXXXXXXMKPD 348
+ AY+ G + F+++ +RD V+W +I GYS +G
Sbjct: 79 LLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT 138
Query: 349 EVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTA 405
V ++ L + G + LG++IH +K E++ ++ MYA G I A
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLL-----VGSPLLYMYANVGCISDA 193
Query: 406 LDVFCKTSKDKKTTILYNSI------------------------------ISGLAHHGLG 435
VF D + T++YNS+ I GLA +GL
Sbjct: 194 KKVF--YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLA 251
Query: 436 KYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKK 475
K AI F EM++ GL D F ++L ACG G ++EGK+
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQ 291
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 175/579 (30%), Positives = 283/579 (48%), Gaps = 55/579 (9%)
Query: 23 CRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNA 82
C++ QI A ++ GL D L + IS +++ +L +S +F V +P +LWN
Sbjct: 20 CKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNH 79
Query: 83 IIKAHSLSPNHAFXXXXXXXXXXXXXXX-----XXFTFPYLLKSCANARTPHLGLQLHCH 137
+IK +S + F +TFP ++K C+N +G +H
Sbjct: 80 LIKGYS----NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGL 135
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCS 197
+++ F V V + + FY +D +A KVF +MP R+ VS+ ++ +V++G +
Sbjct: 136 VLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEA 195
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALV 257
+ F + P+ R LG NALV
Sbjct: 196 KSM------FDLMPE----------------------------RNLGSW-------NALV 214
Query: 258 DMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSW 317
D K G L A+++ + K + ++TS++ YA GD+ AR LF++ DV +W
Sbjct: 215 DGLVKSGDLVNAKKLFDEM--PKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAW 272
Query: 318 TAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAA 377
+A+I GY+ G +KPDE +V +S C+++G EL ++ Y
Sbjct: 273 SALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVD-SYLH 331
Query: 378 ENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKY 437
+ + + A++DM AKCG +D A +F ++ + Y S++ G+A HG G
Sbjct: 332 QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLF--EEMPQRDLVSYCSMMEGMAIHGCGSE 389
Query: 438 AITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
AI LFE+M G+VPD V F +L CG S LV+EG + FE M Y + +HY C+V
Sbjct: 390 AIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIV 449
Query: 498 DLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGA 557
+LL R G L EAY LI +MPF+A+A W +LL C +HG+ E+A++ + L +E
Sbjct: 450 NLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAG 509
Query: 558 RYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYV 596
YV+LSN+ A +D+ + A +R ++ GI K G S++
Sbjct: 510 SYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 261/508 (51%), Gaps = 45/508 (8%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
T +L++C + R L ++ +++K+ F V N L+ Y D A VF
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
M +D VS+N +I+G++++G +MK+ M + D T + L+S + L D + G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
+ +H + C+ + + NAL+DMYAKCG + + ++ S + G +V W +++SA
Sbjct: 428 KGLHSNGIKSGICI--DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV--TWNTVISA 483
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
GD ++ QM + +VV PD
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVV-------------------------------PDMATF 512
Query: 353 VAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
+ L CA L A LG+ IH L++ E+ N A+++MY+KCG ++ + VF
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN-----ALIEMYSKCGCLENSSRVF 567
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+ S+ + + + +I +G G+ A+ F +M G+VPD V F+A++ AC HSGL
Sbjct: 568 ERMSR--RDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGL 625
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
VDEG FE M T Y ++P +EHY CVVDLL R +S+A I MP K +A IW ++L
Sbjct: 626 VDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Query: 530 SACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQK 589
AC+ GD+E A+ + ++ + D ++ SN A + + D+ + +RK++ + I K
Sbjct: 686 RACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITK 745
Query: 590 PPGWSYVEMNGALHKFLAGDKSHPEAKA 617
PG+S++E+ +H F +GD S P+++A
Sbjct: 746 NPGYSWIEVGKNVHVFSSGDDSAPQSEA 773
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 137/524 (26%), Positives = 228/524 (43%), Gaps = 56/524 (10%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTN-PDLFL 79
SS + + +I A ++ GL F S LI + ++ R SL +F V+ +++L
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKY-SHFREPASSLSVFRRVSPAKNVYL 73
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
WN+II+A S + +TFP ++K+CA +G ++ ++
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMK 199
F S +FV NAL+ Y A +VF++MPVRD VS+N +I+G+ G +++
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 200 VLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDM 259
+ +++ I PD +T+ ++L A +L + G+ +HG + ++ N LV M
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS--VVVVNNGLVAM 251
Query: 260 YAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTA 319
Y K + D ARR+FD+M RD VS+
Sbjct: 252 YLK------------------------------FRRPTD---ARRVFDEMDVRDSVSYNT 278
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
MI GY KPD + V + L C L L L + I+ N
Sbjct: 279 MICGYLKLE-MVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIY------N 331
Query: 380 WHCGQNGGFTCA------VVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG 433
+ GF ++D+YAKCG + TA DVF S + K T+ +NSIISG G
Sbjct: 332 YML--KAGFVLESTVRNILIDVYAKCGDMITARDVF--NSMECKDTVSWNSIISGYIQSG 387
Query: 434 LGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHY 493
A+ LF+ M ++ D +T++ L+ + GK S G+ +
Sbjct: 388 DLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG-LHSNGIKSGICIDLSVS 446
Query: 494 GCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGD 537
++D+ + G + ++ + +M + V W ++SAC GD
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGD 489
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 222/503 (44%), Gaps = 45/503 (8%)
Query: 40 GLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXX 99
G DLF+ AL+ + + L + ++F + DL WN++I +S +
Sbjct: 136 GFESDLFVGNALVDMY-SRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 100 XXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCV 159
FT +L + N G LH +KS +S V V N L+ Y
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 160 FRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKV-LGDMRGFGIRPDEYTLVT 218
FR +A +VF++M VRD VSYN MI G+++ S+++ L ++ F +PD T+ +
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF--KPDLLTVSS 312
Query: 219 LLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRN 278
+L AC L D + + ++ + + L + + N L+D+YAKCG + A V + +
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVL--ESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 279 GKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXX 338
+V +W S++S Y GD+ A +LF M MI
Sbjct: 371 KDTV--SWNSIISGYIQSGDLMEAMKLFKMM----------MI----------------- 401
Query: 339 XXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAK 398
+ D + + +S RL L+ G+ +H ++ C + + A++DMYAK
Sbjct: 402 ----MEEQADHITYLMLISVSTRLADLKFGKGLH-SNGIKSGIC-IDLSVSNALIDMYAK 455
Query: 399 CGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFV 458
CG + +L +F +S T+ +N++IS G + + +MR +VPD TF+
Sbjct: 456 CGEVGDSLKIF--SSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513
Query: 459 ALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPF 518
L C GK+ +G +++ ++++ + G L + + M
Sbjct: 514 VTLPMCASLAAKRLGKE-IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS- 571
Query: 519 KANAVIWRALLSACKVHGDVELA 541
+ + V W ++ A ++G+ E A
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKA 594
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 137/311 (44%), Gaps = 13/311 (4%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
R + A I +M+ G + + LI +A + + +F+ + D WN+I
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMIT-ARDVFNSMECKDTVSWNSI 379
Query: 84 IKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
I + S + T+ L+ G LH + +KS
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
+ V+NAL+ Y + ++ K+F M D V++N +I+ VR G ++V
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLV--NALVDMYA 261
MR + PD T + L C+SL +R+G+++H + R G + L NAL++MY+
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR----FGYESELQIGNALIEMYS 555
Query: 262 KCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER----DVVSW 317
KCGCLE + RV R + V WT ++ AY G+ E A F M + D V +
Sbjct: 556 KCGCLENSSRVFE--RMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 318 TAMISGYSHAG 328
A+I SH+G
Sbjct: 614 IAIIYACSHSG 624
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 201/463 (43%), Gaps = 55/463 (11%)
Query: 116 PYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM-P 174
P++ ++ +++ + ++H ++ S F + L+ Y FR+ ++ VF ++ P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQ 234
++ +N +I F + G +++ G +R + PD+YT +++ AC+ L D +G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG-- 125
Query: 235 VHGLVYRELGCLG-DNALLV-NALVDMYAKCGCLELAERVVS--GVRNGKSVVAAWTSLV 290
LVY ++ +G ++ L V NALVDMY++ G L A +V VR+ + +W SL+
Sbjct: 126 --DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRD----LVSWNSLI 179
Query: 291 SAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEV 350
S Y+S G E A ++ ++ SW PD
Sbjct: 180 SGYSSHGYYEEALEIYHELKN----SWIV---------------------------PDSF 208
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC 410
V + L L ++ G+ +H A +V MY K A VF
Sbjct: 209 TVSSVLPAFGNLLVVKQGQGLH--GFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF- 265
Query: 411 KTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLV 470
D + ++ YN++I G + + ++ +F E L PD +T ++L ACGH +
Sbjct: 266 -DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDL 323
Query: 471 DEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLS 530
K + M G + ++D+ + G + A + +M K + V W +++S
Sbjct: 324 SLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIIS 381
Query: 531 ACKVHGDV-ELAKLACQELLAVEHDHGARYVML---SNMLADM 569
GD+ E KL ++ E Y+ML S LAD+
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 26/303 (8%)
Query: 32 IQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSP 91
+ ++ + +G+ DL +S ALI +A + SL++FS + D WN +I A
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGE-VGDSLKIFSSMGTGDTVTWNTVISACVRFG 488
Query: 92 NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVAN 151
+ A TF L CA+ LG ++HC L++ + S + + N
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 152 ALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRP 211
AL+ Y N+ +VFE+M RD V++ MI + G +++ DM GI P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 212 DEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGD-------NALLVN--ALVDMYAK 262
D + ++ ACS GLV L C + ++ + +VD+ ++
Sbjct: 609 DSVVFIAIIYACSH----------SGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSR 658
Query: 263 CGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMIS 322
+ AE + + K + W S++ A + GD+E A R+ R ++
Sbjct: 659 SQKISKAEEFIQAM-PIKPDASIWASVLRACRTSGDMETAERV-----SRRIIELNPDDP 712
Query: 323 GYS 325
GYS
Sbjct: 713 GYS 715
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 154/521 (29%), Positives = 264/521 (50%), Gaps = 47/521 (9%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD 177
LL +C + R G ++H H++K+R+ ++ LL FY +A KV ++MP ++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
VS+ MI+ + + G + ++ V +M +P+E+T T+L++C +G+Q+HG
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 238 LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
L+ + N S + +SL+ YA G
Sbjct: 178 LIVK-----------------------------------WNYDSHIFVGSSLLDMYAKAG 202
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS 357
++ AR +F+ + ERDVVS TA+I+GY+ G M P+ V + L+
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLT 262
Query: 358 ECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSK 414
+ L L+ G++ H L+ + QN +++DMY+KCG++ A +F +
Sbjct: 263 ALSGLALLDHGKQAHCHVLRRELPFYAVLQN-----SLIDMYSKCGNLSYARRLF--DNM 315
Query: 415 DKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLV-PDGVTFVALLCACGHSGLVDEG 473
++T I +N+++ G + HGLG+ + LF MR V PD VT +A+L C H + D G
Sbjct: 316 PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTG 375
Query: 474 KKPFESM-STVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSAC 532
F+ M + YG P EHYGC+VD+LGR G + EA+ I MP K A + +LL AC
Sbjct: 376 LNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGAC 435
Query: 533 KVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPG 592
+VH V++ + + L+ +E ++ YV+LSN+ A + + +VR + + K PG
Sbjct: 436 RVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPG 495
Query: 593 WSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
S+++ LH F A D++HP + +++I++ +K G
Sbjct: 496 RSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAG 536
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 171/410 (41%), Gaps = 38/410 (9%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
R ++ ++ AHM+ T +L T L+ F+ L + ++ + ++ W A+
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD-CLEDARKVLDEMPEKNVVSWTAM 124
Query: 84 IKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
I +S + + + FTF +L SC A LG Q+H +VK +
Sbjct: 125 ISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY 184
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
SH+FV ++LL Y A ++FE +P RD VS +I G+ + G ++++
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKC 263
+ G+ P+ T +LL+A S L G+Q H V R L A+L N+L+DMY+KC
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE--LPFYAVLQNSLIDMYSKC 302
Query: 264 GCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISG 323
G L A RRLFD M ER +SW AM+ G
Sbjct: 303 GNLSYA---------------------------------RRLFDNMPERTAISWNAMLVG 329
Query: 324 YSHAGY-XXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHC 382
YS G +KPD V ++A LS C+ + G I A +
Sbjct: 330 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGT 389
Query: 383 GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHH 432
+VDM + G ID A + F K K T + S++ H
Sbjct: 390 KPGTEHYGCIVDMLGRAGRIDEAFE-FIKRMPSKPTAGVLGSLLGACRVH 438
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 168/627 (26%), Positives = 302/627 (48%), Gaps = 54/627 (8%)
Query: 17 ALLASSCRTIQQALQIQAHMVV--TGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTN 74
++L++ + + ++ H V TGL ++F+ AL+S +A + + +R+F ++
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 75 PDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLK---------SCANA 125
P+ + A+I + +L S +
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEI 262
Query: 126 RTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMI 185
LG Q+HC ++ F + + N+LL Y +D + A +F +MP + VS+N+MI
Sbjct: 263 YGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 186 NGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLV------ 239
GF + R+ S++ L MR G +P+E T +++L AC D GR++ +
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVS 382
Query: 240 ---------------------YRELGC--LGDNALLVNALVDMYAKCGCLELAERV---- 272
+R++ L + ++ ++ A+ LE +++
Sbjct: 383 AWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVV 442
Query: 273 -VSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQ-MGERDVVSWTAMISGYSHAGYX 330
+ + +V+ L++ Y+ +E++ +FD + E D+ W +MISG+ H
Sbjct: 443 IRTEISKNSHIVSG---LIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLD 499
Query: 331 XXXXXXXXXX-XXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT 389
+ P+E LS C+RL +L GR+ H + +
Sbjct: 500 TKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV--SDSFVE 557
Query: 390 CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG 449
A+ DMY KCG ID+A F + +K T+++N +I G H+G G A+ L+ +M G
Sbjct: 558 TALTDMYCKCGEIDSARQFF--DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSG 615
Query: 450 LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA 509
PDG+TFV++L AC HSGLV+ G + SM ++G+ P+++HY C+VD LGR G L +A
Sbjct: 616 EKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDA 675
Query: 510 YHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADM 569
L P+K+++V+W LLS+C+VHGDV LA+ ++L+ ++ A YV+LSN + +
Sbjct: 676 EKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSL 735
Query: 570 DQHDEAASVRKAIDNVGIQKPPGWSYV 596
Q D++A+++ ++ + K PG S+
Sbjct: 736 RQWDDSAALQGLMNKNRVHKTPGQSWT 762
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 197/464 (42%), Gaps = 57/464 (12%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFY--CVFRDAHNAYKVF 170
FT +L +C+ G++ H VK+ ++FV NALL Y C F + +VF
Sbjct: 139 FTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGV-RVF 197
Query: 171 EQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLS------ACS 224
E + + VSY +I G R + ++++ M G++ D L +LS C
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 225 SLED---QRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV----- 276
SL + +G+Q+H L R LG G + L N+L+++YAK + AE + + +
Sbjct: 258 SLSEIYGNELGKQIHCLALR-LG-FGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 277 --------------RNGKSV--------------VAAWTSLVSAYASRGDVEVARRLFDQ 308
R+ KSV S++ A GDVE RR+F
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 309 MGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
+ + V +W AM+SGYS+ + +KPD+ + LS CARL LE G
Sbjct: 376 IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Query: 369 RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF--CKTSKDKKTTILYNSII 426
++IH +N ++ +Y++C ++ + +F C D +NS+I
Sbjct: 436 KQIH--GVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELD---IACWNSMI 490
Query: 427 SGLAHHGLGKYAITLFEEMRLLG-LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYG 485
SG H+ L A+ LF M L P+ +F +L +C + G++ F + G
Sbjct: 491 SGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQ-FHGLVVKSG 549
Query: 486 VNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
+ D+ + G + A + + N VIW ++
Sbjct: 550 YVSDSFVETALTDMYCKCGEIDSARQF-FDAVLRKNTVIWNEMI 592
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 148/343 (43%), Gaps = 47/343 (13%)
Query: 147 VFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
V+ NA L F C D A +VF+ MP RD VS+N MI+ VR G ++ V M
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC 131
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCL 266
G P +TL ++LSACS + D G + HG+ + L N + NAL+ MYAKCG +
Sbjct: 132 DGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKT--GLDKNIFVGNALLSMYAKCGFI 189
Query: 267 ELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSH 326
V+ R+F+ + + + VS+TA+I G +
Sbjct: 190 --------------------------------VDYGVRVFESLSQPNEVSYTAVIGGLAR 217
Query: 327 AGYXXXXXXXXXXXXXXXMKPDEV------DVVAALSECARLGAL---ELGRRIHLKYAA 377
++ D V + A C L + ELG++IH A
Sbjct: 218 ENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHC--LA 275
Query: 378 ENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKY 437
G + +++++YAK ++ A +F + + + +N +I G
Sbjct: 276 LRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP--EVNVVSWNIMIVGFGQEYRSDK 333
Query: 438 AITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM 480
++ MR G P+ VT +++L AC SG V+ G++ F S+
Sbjct: 334 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 258/518 (49%), Gaps = 53/518 (10%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKS-RFHSHVFVANALLHFYCVFRDAHNAYKVFE 171
FT +L +C++ G +LH + +K+ + FV +AL+ YC + + +VF+
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 172 QMPVRDCVSYNMMINGFVRAGRAGCSMKV-LGDMRGFGIRPDEYTLVTLLSACSSLEDQR 230
M R +N MI G+ + ++ + +G G+ + T+ ++ AC
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 231 VGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLV 290
+HG V + L + + N L+DMY++ G
Sbjct: 423 RKEAIHGFVVKR--GLDRDRFVQNTLMDMYSRLG-------------------------- 454
Query: 291 SAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY-----------XXXXXXXXXX 339
+++A R+F +M +RD+V+W MI+GY + +
Sbjct: 455 -------KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 340 XXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKC 399
+KP+ + ++ L CA L AL G+ IH YA +N + + A+VDMYAKC
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIH-AYAIKN-NLATDVAVGSALVDMYAKC 565
Query: 400 GSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVA 459
G + + VF + + K I +N II HG G+ AI L M + G+ P+ VTF++
Sbjct: 566 GCLQMSRKVFDQIPQ--KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 460 LLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFK 519
+ AC HSG+VDEG + F M YGV P +HY CVVDLLGR G + EAY L+ MP
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 520 AN-AVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASV 578
N A W +LL A ++H ++E+ ++A Q L+ +E + + YV+L+N+ + D+A V
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 579 RKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAK 616
R+ + G++K PG S++E +HKF+AGD SHP+++
Sbjct: 744 RRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSE 781
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 50/426 (11%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFH-SHVFVANALLHFYCVFRDAHNAYKVFE 171
+ FP LLK+ A+ + LG Q+H H+ K + V VAN L++ Y D YKVF+
Sbjct: 98 YAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFD 157
Query: 172 QMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSL---ED 228
++ R+ VS+N +I+ + +++ M + P +TLV++++ACS+L E
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 229 QRVGRQVH--GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAW 286
+G+QVH GL EL N+ ++N LV MY K G L
Sbjct: 218 LMMGKQVHAYGLRKGEL-----NSFIINTLVAMYGKLGKL-------------------- 252
Query: 287 TSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK 346
++ L G RD+V+W ++S ++
Sbjct: 253 -------------ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 347 PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
PDE + + L C+ L L G+ +H YA +N +N A+VDMY C + +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELH-AYALKNGSLDENSFVGSALVDMYCNCKQVLSGR 358
Query: 407 DVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM-RLLGLVPDGVTFVALLCACG 465
VF D+K L+N++I+G + + K A+ LF M GL+ + T ++ AC
Sbjct: 359 RVF-DGMFDRKIG-LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 466 HSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIW 525
SG K+ G++ ++D+ R G + A + M + + V W
Sbjct: 417 RSGAFSR-KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTW 474
Query: 526 RALLSA 531
+++
Sbjct: 475 NTMITG 480
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 203 DMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAK 262
DM GI+PD Y LL A + L+D +G+Q+H VY+ G D+ + N LV++Y K
Sbjct: 87 DMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYK-FGYGVDSVTVANTLVNLYRK 145
Query: 263 CGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMIS 322
C GD ++FD++ ER+ VSW ++IS
Sbjct: 146 C---------------------------------GDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 323 GYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALE---LGRRIHLKYAAEN 379
++P +V+ ++ C+ L E +G+++H A
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH----AYG 228
Query: 380 WHCGQNGGFTC-AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
G+ F +V MY K G + ++ + S + + +N+++S L + A
Sbjct: 229 LRKGELNSFIINTLVAMYGKLGKLASSKVLL--GSFGGRDLVTWNTVLSSLCQNEQLLEA 286
Query: 439 ITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKK 475
+ EM L G+ PD T ++L AC H ++ GK+
Sbjct: 287 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 260/516 (50%), Gaps = 49/516 (9%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
FTF L KSC+ + + GLQLH + + F + ++V+ ++ Y F A F++
Sbjct: 79 FTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDE 138
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
MP R VS+ +I+G++R G L S L DQ
Sbjct: 139 MPHRSEVSWTALISGYIRCGE--------------------------LDLASKLFDQMPH 172
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
+ + ++ NA++D + K G + A R+ + + V WT+++
Sbjct: 173 VK--------------DVVIYNAMMDGFVKSGDMTSARRLFDEMTH--KTVITWTTMIHG 216
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGY-SHAGYXXXXXXXXXXXXXXXMKPDEVD 351
Y + D++ AR+LFD M ER++VSW MI GY + + PD+V
Sbjct: 217 YCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVT 276
Query: 352 VVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK 411
+++ L + GAL LG H + + A++DMY+KCG I+ A +F +
Sbjct: 277 ILSVLPAISDTGALSLGEWCHC--FVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDE 334
Query: 412 TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVD 471
+ K +N++I G A +G + A+ LF M ++ PD +T +A++ AC H GLV+
Sbjct: 335 MPE--KQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVE 391
Query: 472 EGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA 531
EG+K F M + G+N ++EHYGC+VDLLGR G L EA LI NMPF+ N +I + LSA
Sbjct: 392 EGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSA 450
Query: 532 CKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPP 591
C + D+E A+ ++ + +E + YV+L N+ A + D+ V+ + +K
Sbjct: 451 CGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEV 510
Query: 592 GWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINM 627
G S +E+N + +F++GD +HP ++ L+L D+ M
Sbjct: 511 GCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLM 546
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 161/380 (42%), Gaps = 53/380 (13%)
Query: 166 AYKVFEQMPVRD-CVSYNMMINGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVTLLSAC 223
A K+F+Q P RD N MI ++ + S + D+R PD +T TL +C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 224 SSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVV 283
S G Q+H ++R C + + +VDMYAK G + A + + V
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCA--DMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV- 145
Query: 284 AAWTSLVSAYASRGDVEVARRLFDQMGE-RDVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
+WT+L+S Y G++++A +LFDQM +DVV + AM+ G+ +G
Sbjct: 146 -SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSG-------------- 190
Query: 343 XXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSI 402
D E + IH G+ C + D I
Sbjct: 191 -----DMTSARRLFDEMTHKTVITWTTMIH--------------GY-CNIKD-------I 223
Query: 403 DTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR-LLGLVPDGVTFVALL 461
D A +F + ++ + +N++I G + + I LF+EM+ L PD VT +++L
Sbjct: 224 DAARKLF--DAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVL 281
Query: 462 CACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKAN 521
A +G + G+ ++ +++ ++D+ + G + +A + MP K
Sbjct: 282 PAISDTGALSLGEW-CHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQV 340
Query: 522 AVIWRALLSACKVHGDVELA 541
A W A++ ++G+ A
Sbjct: 341 AS-WNAMIHGYALNGNARAA 359
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 280/581 (48%), Gaps = 48/581 (8%)
Query: 41 LHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIK--AHSLSPNHAFXXX 98
D+ + +LI F + ++ ++F ++ ++ W +I P A
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 99 XXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYC 158
FT + +CA LG QLH ++S V + ++ C
Sbjct: 258 LDMVLSGFESDK--FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKC 315
Query: 159 VFRDA-HNAYKVFEQMPVRDCVSYNMMINGFVR-AGRAGCSMKVLGDMRGFG-IRPDEYT 215
+ + KVF++M +S+ +I G+++ A ++ + +M G + P+ +T
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 216 LVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSG 275
+ AC +L D RVG+QV G ++ L N+ + N+++ M+ K +E A+R
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKR--GLASNSSVANSVISMFVKSDRMEDAQRAFES 433
Query: 276 VRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXX 335
+ V ++ + + + E A +L ++ ER++ +S ++ A
Sbjct: 434 LSEKNLV--SYNTFLDGTCRNLNFEQAFKLLSEITEREL-----GVSAFTFA-------- 478
Query: 336 XXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC-AVVD 394
+ LS A +G++ G +IH + C Q C A++
Sbjct: 479 ------------------SLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP---VCNALIS 517
Query: 395 MYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDG 454
MY+KCGSIDTA VF + + I + S+I+G A HG + F +M G+ P+
Sbjct: 518 MYSKCGSIDTASRVF--NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 455 VTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLIL 514
VT+VA+L AC H GLV EG + F SM + + P+MEHY C+VDLL R GLL++A+ I
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 515 NMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDE 574
MPF+A+ ++WR L AC+VH + EL KLA +++L ++ + A Y+ LSN+ A + +E
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 575 AASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEA 615
+ +R+ + + K G S++E+ +HKF GD +HP A
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNA 736
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 51/363 (14%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
TF LLKSC AR LG +H L++ + N+L+ Y D+ A VFE M
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 174 P---VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQR 230
RD VS++ M+ + GR ++KV + G+ P++Y ++ ACS+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 231 VGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLV 290
VGR G + + G + + +L+DM+ K
Sbjct: 184 VGRVTLGFLMKT-GHFESDVCVGCSLIDMFVK---------------------------- 214
Query: 291 SAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEV 350
E A ++FD+M E +VV+WT MI+ G+ + D+
Sbjct: 215 ----GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENW--HCGQNGGFTCAVVDMYAKC---GSIDTA 405
+ + S CA L L LG+++H +W G C++VDMYAKC GS+D
Sbjct: 271 TLSSVFSACAELENLSLGKQLH------SWAIRSGLVDDVECSLVDMYAKCSADGSVDDC 324
Query: 406 LDVFCKTSKDKKTTILYNSIISG-LAHHGLGKYAITLFEEMRLLGLV-PDGVTFVALLCA 463
VF + + + + + ++I+G + + L AI LF EM G V P+ TF + A
Sbjct: 325 RKVFDRM--EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 464 CGH 466
CG+
Sbjct: 383 CGN 385
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 111/530 (20%), Positives = 219/530 (41%), Gaps = 55/530 (10%)
Query: 19 LASSC---RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALR-----HSLRLFS 70
L SC R + + A ++ + D L +LIS ++ + + + ++R F
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 71 LVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHL 130
D+ W+A++ + + + + ++++C+N+ +
Sbjct: 128 ---KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 131 GLQLHCHLVKS-RFHSHVFVANALLHFYCVFRDA-HNAYKVFEQMPVRDCVSYNMMINGF 188
G L+K+ F S V V +L+ + ++ NAYKVF++M + V++ +MI
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 189 VRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGD 248
++ G +++ DM G D++TL ++ SAC+ LE+ +G+Q+H R G + D
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDD 303
Query: 249 NALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQ 308
+ +LVDMYAKC ++ G V+ R++FD+
Sbjct: 304 ---VECSLVDMYAKC------------------------------SADGSVDDCRKVFDR 330
Query: 309 MGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXX--MKPDEVDVVAALSECARLGALE 366
M + V+SWTA+I+GY ++P+ +A C L
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 367 LGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSII 426
+G+++ + A N +V+ M+ K ++ A F S +K + YN+ +
Sbjct: 391 VGKQVLGQ--AFKRGLASNSSVANSVISMFVKSDRMEDAQRAF--ESLSEKNLVSYNTFL 446
Query: 427 SGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGV 486
G + + A L E+ L TF +LL + G + +G++ S G+
Sbjct: 447 DGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ-IHSQVVKLGL 505
Query: 487 NPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
+ ++ + + G + A + N N + W ++++ HG
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASR-VFNFMENRNVISWTSMITGFAKHG 554
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 1/194 (0%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
Q+ GL + ++ ++IS F + R + + R F ++ +L +N + +
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDR-MEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
N FTF LL AN + G Q+H +VK + V
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
NAL+ Y A +VF M R+ +S+ MI GF + G A ++ M G++
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 211 PDEYTLVTLLSACS 224
P+E T V +LSACS
Sbjct: 573 PNEVTYVAILSACS 586
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 49/287 (17%)
Query: 202 GDMRGF----------GIRP-DEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNA 250
GD+RG GIRP D T +LL +C D R+G+ VH + E D +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI-EFDIEPD-S 97
Query: 251 LLVNALVDMYAKCGCLELAERVVSGVRN-GKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
+L N+L+ +Y+K G AE V +R GK V +W+++++ Y + G A ++F +
Sbjct: 98 VLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 310 GERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGR 369
E +V P++ A + C+ + +G
Sbjct: 158 LELGLV-------------------------------PNDYCYTAVIRACSNSDFVGVG- 185
Query: 370 RIHLKYAAENWHCGQNGGFTCAVVDMYAKC-GSIDTALDVFCKTSKDKKTTILYNSIISG 428
R+ L + + H + C+++DM+ K S + A VF K S + + + +I+
Sbjct: 186 RVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS--ELNVVTWTLMITR 243
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKK 475
G + AI F +M L G D T ++ AC + GK+
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 345 MKP-DEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSID 403
++P D V + L C R LG+ +H + + + +++ +Y+K G
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI--EFDIEPDSVLYNSLISLYSKSGDSA 114
Query: 404 TALDVFCKTSK-DKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC 462
A DVF + K+ + ++++++ ++G AI +F E LGLVP+ + A++
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIR 174
Query: 463 ACGHSGLVDEGKKPFESMSTVYGVNPQMEHY------GC-VVDLLGRGGLLSEAYHLILN 515
AC +S V G+ G + H+ GC ++D+ +G E + + +
Sbjct: 175 ACSNSDFVGVGR-------VTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD 227
Query: 516 MPFKANAVIWRALLSACKVHG 536
+ N V W +++ C G
Sbjct: 228 KMSELNVVTWTLMITRCMQMG 248
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/626 (27%), Positives = 291/626 (46%), Gaps = 55/626 (8%)
Query: 14 RVKALLASSCRTIQQALQIQAHMVVTG-------LHHDLFLSTALISFFATNHRALRHSL 66
R+K L S + + QI A ++ TG + DL S I + ++
Sbjct: 19 RIK-FLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIG-------EISYAR 70
Query: 67 RLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANAR 126
++F + + ++N++I +S N TF +K+C +
Sbjct: 71 KVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGL 130
Query: 127 TPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMIN 186
G + C V + + VFV +++L+ Y A +F +M RD + + M+
Sbjct: 131 VLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVT 190
Query: 187 GFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCL 246
GF +AG++ +++ +M+ G D ++ LL A L D ++GR VHG +YR
Sbjct: 191 GFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYR----- 245
Query: 247 GDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLF 306
L +N +V+ TSLV YA G +EVA R+F
Sbjct: 246 --TGLPMNVVVE----------------------------TSLVDMYAKVGFIEVASRVF 275
Query: 307 DQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALE 366
+M + VSW ++ISG++ G +PD V +V L C+++G+L+
Sbjct: 276 SRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLK 335
Query: 367 LGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSII 426
GR +H H T A++DMY+KCG++ ++ ++F + K + +N++I
Sbjct: 336 TGRLVHCYILKR--HVLDRVTAT-ALMDMYSKCGALSSSREIFEHVGR--KDLVCWNTMI 390
Query: 427 SGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGV 486
S HG G+ ++LF +M + PD TF +LL A HSGLV++G+ F M Y +
Sbjct: 391 SCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKI 450
Query: 487 NPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQ 546
P +HY C++DLL R G + EA +I + IW ALLS C H ++ + +A
Sbjct: 451 QPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAAN 510
Query: 547 ELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFL 606
++L + D ++SN A ++ E A VRK + N ++K PG+S +E+NG L FL
Sbjct: 511 KILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFL 570
Query: 607 AGDKSHPEAKATELMLRDINMGVKSI 632
D SH E +LR++ ++ +
Sbjct: 571 MEDLSHHEHYHMLQVLRNLKTEIRDV 596
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/602 (28%), Positives = 270/602 (44%), Gaps = 54/602 (8%)
Query: 36 MVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAF 95
+VV GL +FL LI ++ + L ++ LF D WN++I +
Sbjct: 174 VVVNGLSQQVFLINVLIDMYSKCGK-LDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232
Query: 96 XXXXXXXXXXXXXXXXXFTFPYLLKSCA---NARTPHLGLQLHCHLVKSRFHSHVFVANA 152
+ +LK+C N G+ +HC+ K + V A
Sbjct: 233 PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTA 292
Query: 153 LLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGR-----AGCSMKVLGDMRGF 207
LL Y A K+F MP ++ V+YN MI+GF++ + + K+ DM+
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
G+ P T +L ACS+ + GRQ+H L+ +
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICK-------------------------- 386
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
N +S ++L+ YA G E + F ++D+ SWT+MI +
Sbjct: 387 ---------NNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQN 437
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG 387
++P+E V +S CA AL G +I YA ++
Sbjct: 438 EQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQ-GYAIKSGI----DA 492
Query: 388 FT---CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEE 444
FT + + MYAK G++ A VF + T Y+++IS LA HG A+ +FE
Sbjct: 493 FTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVAT--YSAMISSLAQHGSANEALNIFES 550
Query: 445 MRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGG 504
M+ G+ P+ F+ +L AC H GLV +G K F+ M Y +NP +H+ C+VDLLGR G
Sbjct: 551 MKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTG 610
Query: 505 LLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSN 564
LS+A +LIL+ F+ + V WRALLS+C+V+ D + K + L+ +E + YV+L N
Sbjct: 611 RLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHN 670
Query: 565 MLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRD 624
+ D + A VR+ + + G++K P S++ + H F D SHP ++ ML
Sbjct: 671 IYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLET 730
Query: 625 IN 626
++
Sbjct: 731 MD 732
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 167/368 (45%), Gaps = 45/368 (12%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
+ L ++ A + + LG H H++KS + +++ N LL+ YC R+ A ++F++MP
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQ 234
R+ +S+N +I+G+ + G +M++ + R ++ D++T L C D +G
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
+HGLV + L L+N L+DMY+KCG L+ A + R + +W SL+S Y
Sbjct: 170 LHGLVV--VNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD--RCDERDQVSWNSLISGYV 225
Query: 295 SRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVA 354
G E L +M RD ++ T G V+
Sbjct: 226 RVGAAEEPLNLLAKM-HRDGLNLTTYALG---------------------------SVLK 257
Query: 355 ALSECARLGALELGRRIHLKYAAENWHCGQNGGFT--CAVVDMYAKCGSIDTALDVFCKT 412
A G +E G IH Y A+ G A++DMYAK GS+ A+ +F +
Sbjct: 258 ACCINLNEGFIEKGMAIHC-YTAK---LGMEFDIVVRTALLDMYAKNGSLKEAIKLF--S 311
Query: 413 SKDKKTTILYNSIISGLAH-----HGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHS 467
K + YN++ISG A LF +M+ GL P TF +L AC +
Sbjct: 312 LMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAA 371
Query: 468 GLVDEGKK 475
++ G++
Sbjct: 372 KTLEYGRQ 379
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 188/488 (38%), Gaps = 45/488 (9%)
Query: 60 RALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLL 119
R L + +LF + ++ +N++I ++ + FT+ L
Sbjct: 96 RELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGAL 155
Query: 120 KSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCV 179
C LG LH +V + VF+ N L+ Y A +F++ RD V
Sbjct: 156 GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQV 215
Query: 180 SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACS-SLEDQRVGRQVHGL 238
S+N +I+G+VR G A + +L M G+ Y L ++L AC +L + + + +
Sbjct: 216 SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 239 VYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGD 298
Y + + ++ AL+DMYAK G
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAK---------------------------------NGS 302
Query: 299 VEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK-----PDEVDVV 353
++ A +LF M ++VV++ AMISG+ M+ P
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 354 AALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTS 413
L C+ LE GR+IH N+ + G A++++YA GS + + F TS
Sbjct: 363 VVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG--SALIELYALMGSTEDGMQCFASTS 420
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
K + + S+I + + A LF ++ + P+ T ++ AC + G
Sbjct: 421 KQDIAS--WTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSG 478
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
++ + + G++ + + + G + A + + + + + A++S+
Sbjct: 479 EQ-IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLA 536
Query: 534 VHGDVELA 541
HG A
Sbjct: 537 QHGSANEA 544
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 165/603 (27%), Positives = 280/603 (46%), Gaps = 43/603 (7%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
++ H+V G D+ + ALI+ + ++ + LF + D+ WNA+I + +
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCG-DVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
T ++ +C LG +H +++ + F + V
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
N+L Y A K+F +M +D VS+ MI+G+ ++ M ++
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 211 PDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAE 270
PDE T+ +LSAC++L D G ++H L + L ++ N L++MY+KC C
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKAR--LISYVIVANNLINMYSKCKC----- 448
Query: 271 RVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYX 330
++ A +F + ++V+SWT++I+G
Sbjct: 449 ----------------------------IDKALDIFHNIPRKNVISWTSIIAGL-RLNNR 479
Query: 331 XXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC 390
++P+ + + AAL+ CAR+GAL G+ IH G +
Sbjct: 480 CFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG--VGLDDFLPN 537
Query: 391 AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL 450
A++DMY +CG ++TA F + KK +N +++G + G G + LF+ M +
Sbjct: 538 ALLDMYVRCGRMNTAWSQF---NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRV 594
Query: 451 VPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAY 510
PD +TF++LLC C S +V +G F M YGV P ++HY CVVDLLGR G L EA+
Sbjct: 595 RPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAH 653
Query: 511 HLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMD 570
I MP + +W ALL+AC++H ++L +L+ Q + ++ Y++L N+ AD
Sbjct: 654 KFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCG 713
Query: 571 QHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVK 630
+ E A VR+ + G+ G S+VE+ G +H FL+ DK HP+ K +L +
Sbjct: 714 KWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMS 773
Query: 631 SIG 633
+G
Sbjct: 774 EVG 776
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 158/338 (46%), Gaps = 45/338 (13%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
+TFP +L++C G ++H H+V+ + + V NAL+ Y D +A +F++
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
MP RD +S+N MI+G+ G +++ MRG + PD TL +++SAC L D+R+G
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
R +H V + + N+L MY G AE++ S R + + +WT+++S
Sbjct: 317 RDIHAYVITT--GFAVDISVCNSLTQMYLNAGSWREAEKLFS--RMERKDIVSWTTMISG 372
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
Y + A + M + V KPDE+ V
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSV-------------------------------KPDEITV 401
Query: 353 VAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
A LS CA LG L+ G +H +K ++ N +++MY+KC ID ALD+F
Sbjct: 402 AAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-----LINMYSKCKCIDKALDIF 456
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRL 447
+K I + SII+GL + A+ +M++
Sbjct: 457 HNIP--RKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 187/430 (43%), Gaps = 56/430 (13%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
F L++ C R G +++ + S V + NA L + F + +A+ VF +M
Sbjct: 96 VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVTLLSACSSLEDQRVG 232
R+ S+N+++ G+ + G +M + M G ++PD YT +L C + D G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 233 RQVHGLVYR---ELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSL 289
++VH V R EL + +VNAL+ MY KCG
Sbjct: 216 KEVHVHVVRYGYEL-----DIDVVNALITMYVKCG------------------------- 245
Query: 290 VSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE 349
DV+ AR LFD+M RD++SW AMISGY G + PD
Sbjct: 246 --------DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 350 VDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
+ + + +S C LG LGR IH + + ++ MY GS A +F
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGF--AVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+ ++K + + ++ISG ++ L AI + M + PD +T A+L AC G
Sbjct: 356 SRM--ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD 413
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCV----VDLLGRGGLLSEAYHLILNMPFKANAVIW 525
+D G + + + ++ Y V +++ + + +A + N+P K N + W
Sbjct: 414 LDTGVELHK-----LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISW 467
Query: 526 RALLSACKVH 535
++++ +++
Sbjct: 468 TSIIAGLRLN 477
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 174/593 (29%), Positives = 281/593 (47%), Gaps = 42/593 (7%)
Query: 44 DLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXX 103
++F ++ +A + + + + +LF + PD +N +I ++ +
Sbjct: 73 NVFSYNVIVKAYAKDSK-IHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM 131
Query: 104 XXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDA 163
FT L+ +C + L QLHC V F S+ V NA + +Y
Sbjct: 132 RKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 164 HNAYKVFEQM-PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA 222
A VF M +RD VS+N MI + + ++ + +M G + D +TL ++L+A
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 223 CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV 282
+SL+ GRQ HG + + N+ + + L+D Y+KCG + G+ + + V
Sbjct: 250 LTSLDHLIGGRQFHGKLIK--AGFHQNSHVGSGLIDFYSKCGGCD-------GMYDSEKV 300
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYS-HAGYXXXXXXXXXXXX 341
F ++ D+V W MISGYS +
Sbjct: 301 -----------------------FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ 337
Query: 342 XXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNG-GFTCAVVDMYAKCG 400
+PD+ V S C+ L + ++IH A H N A++ +Y K G
Sbjct: 338 RIGHRPDDCSFVCVTSACSNLSSPSQCKQIH--GLAIKSHIPSNRISVNNALISLYYKSG 395
Query: 401 SIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVAL 460
++ A VF + + + +N +I G A HG G A+ L++ M G+ P+ +TFVA+
Sbjct: 396 NLQDARWVFDRMPE--LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAV 453
Query: 461 LCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKA 520
L AC H G VDEG++ F +M + + P+ EHY C++DLLGR G L EA I MP+K
Sbjct: 454 LSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKP 513
Query: 521 NAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRK 580
+V W ALL AC+ H ++ LA+ A EL+ ++ YVML+NM AD + +E ASVRK
Sbjct: 514 GSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRK 573
Query: 581 AIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
++ I+K PG S++E+ H F+A D SHP + L ++ +K +G
Sbjct: 574 SMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVG 626
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 23/256 (8%)
Query: 215 TLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVS 274
T LL + D G+ +H L + + + + L N V++Y+KCG L A
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSI--VASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 275 GVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXX 334
V ++ +V AYA + +AR+LFD++ + D VS+ +ISGY+ A
Sbjct: 68 STEEPN--VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAM 125
Query: 335 XXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHC-GQNGGFTC--- 390
+ D + ++ C R+ L + HC +GGF
Sbjct: 126 VLFKRMRKLGFEVDGFTLSGLIAACC--------DRVDL---IKQLHCFSVSGGFDSYSS 174
Query: 391 ---AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRL 447
A V Y+K G + A+ VF + + + +NS+I H G A+ L++EM
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMD-ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIF 233
Query: 448 LGLVPDGVTFVALLCA 463
G D T ++L A
Sbjct: 234 KGFKIDMFTLASVLNA 249
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 166/598 (27%), Positives = 288/598 (48%), Gaps = 51/598 (8%)
Query: 41 LHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSL--SPNHAFXXX 98
L DL++ ++LI + R + +LR+F + PD+ W++++ SP A
Sbjct: 92 LGSDLYVGSSLIYMYIKCGRMI-EALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFF 150
Query: 99 XXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYC 158
T L+ +C LG +H +++ F + + + N+LL+ Y
Sbjct: 151 RRMVMASDVTPDRV-TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYA 209
Query: 159 VFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVT 218
R A +F+ + +D +S++ +I +V+ G A ++ V DM G P+ T++
Sbjct: 210 KSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLC 269
Query: 219 LLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRN 278
+L AC++ D GR+ H L R+ L + ALVDMY KC E
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRK--GLETEVKVSTALVDMYMKCFSPE----------- 316
Query: 279 GKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYX-XXXXXXX 337
AYA +F ++ +DVVSW A+ISG++ G
Sbjct: 317 ------------EAYA----------VFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFS 354
Query: 338 XXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVD 394
+PD + +V L C+ LG LE + H +KY ++ N ++V+
Sbjct: 355 IMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS-----NPFIGASLVE 409
Query: 395 MYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM-RLLGLVPD 453
+Y++CGS+ A VF + K T+++ S+I+G HG G A+ F M + + P+
Sbjct: 410 LYSRCGSLGNASKVFNGIAL--KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 467
Query: 454 GVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLI 513
VTF+++L AC H+GL+ EG + F+ M Y + P +EHY +VDLLGR G L A +
Sbjct: 468 EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEIT 527
Query: 514 LNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHD 573
MPF I LL AC++H + E+A+ ++L +E +H Y+++SN+ + +
Sbjct: 528 KRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWE 587
Query: 574 EAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKS 631
+R ++ GI+K S +E+ +H+F+A D+ HPE + +L+++++ +K
Sbjct: 588 NVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKE 645
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 206/476 (43%), Gaps = 50/476 (10%)
Query: 67 RLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANAR 126
++F +T L+ WN ++K+ S FT P LK+C R
Sbjct: 15 QMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR 74
Query: 127 TPHLGLQLHCHLVKS-RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMI 185
+ G +H + K S ++V ++L++ Y A ++F+++ D V+++ M+
Sbjct: 75 EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 134
Query: 186 NGFVRAGRAGCSMKVLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELG 244
+GF + G +++ M + PD TL+TL+SAC+ L + R+GR VHG V R
Sbjct: 135 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR-- 192
Query: 245 CLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARR 304
++ LVN+L++ YAK SR E A
Sbjct: 193 GFSNDLSLVNSLLNCYAK--------------------------------SRAFKE-AVN 219
Query: 305 LFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGA 364
LF + E+DV+SW+ +I+ Y G +P+ V+ L CA
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 365 LELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL 421
LE GR+ H ++ E + A+VDMY KC S + A VF + +K +
Sbjct: 280 LEQGRKTHELAIRKGLET-----EVKVSTALVDMYMKCFSPEEAYAVFSRIP--RKDVVS 332
Query: 422 YNSIISGLAHHGLGKYAITLFEEMRLLGLV-PDGVTFVALLCACGHSGLVDEGKKPFESM 480
+ ++ISG +G+ +I F M L PD + V +L +C G +++ K F S
Sbjct: 333 WVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSY 391
Query: 481 STVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
YG + +V+L R G L A + + K + V+W +L++ +HG
Sbjct: 392 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIHG 446
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 169/378 (44%), Gaps = 41/378 (10%)
Query: 160 FRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTL 219
F + +A ++F +M R +N ++ R + + M +PD +TL
Sbjct: 7 FSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVA 66
Query: 220 LSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNG 279
L AC L + G +HG V +++ LG + + ++L+ MY KCG R++ +R
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDV-TLGSDLYVGSSLIYMYIKCG------RMIEALR-- 117
Query: 280 KSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY-XXXXXXXXX 338
+FD++ + D+V+W++M+SG+ G
Sbjct: 118 -------------------------MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRR 152
Query: 339 XXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAK 398
+ PD V ++ +S C +L LGR +H + + ++++ YAK
Sbjct: 153 MVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF--SNDLSLVNSLLNCYAK 210
Query: 399 CGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFV 458
+ A+++F + +K I ++++I+ +G A+ +F +M G P+ T +
Sbjct: 211 SRAFKEAVNLFKMIA--EKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVL 268
Query: 459 ALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPF 518
+L AC + +++G+K E ++ G+ +++ +VD+ + EAY + +P
Sbjct: 269 CVLQACAAAHDLEQGRKTHE-LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR 327
Query: 519 KANAVIWRALLSACKVHG 536
K + V W AL+S ++G
Sbjct: 328 K-DVVSWVALISGFTLNG 344
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/480 (30%), Positives = 252/480 (52%), Gaps = 42/480 (8%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG 192
+LHC+ +K F + VANA + Y A +VF + + S+N +I G ++
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 193 RAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALL 252
S+ M+ G+ PD +T+ +LLSACS L+ R+G++VHG + R N L
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-------NWLE 528
Query: 253 VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER 312
+ V + S++S Y G++ + LFD M ++
Sbjct: 529 RDLFV----------------------------YLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 313 DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH 372
+VSW +I+GY G+ ++ + ++ C+ L +L LGR H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 373 LKYAAENWHCGQNGGF-TCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAH 431
YA + H ++ F C+++DMYAK GSI + VF +K+T +N++I G
Sbjct: 621 -AYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKVF--NGLKEKSTASWNAMIMGYGI 675
Query: 432 HGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQME 491
HGL K AI LFEEM+ G PD +TF+ +L AC HSGL+ EG + + M + +G+ P ++
Sbjct: 676 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLK 735
Query: 492 HYGCVVDLLGRGGLLSEAYHLIL-NMPFKANAVIWRALLSACKVHGDVELAKLACQELLA 550
HY CV+D+LGR G L +A ++ M +A+ IW++LLS+C++H ++E+ + +L
Sbjct: 736 HYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 795
Query: 551 VEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDK 610
+E + YV+LSN+ A + + ++ VR+ ++ + ++K G S++E+N + F+ G++
Sbjct: 796 LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGER 855
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 213/468 (45%), Gaps = 50/468 (10%)
Query: 18 LLASSCRTIQQALQIQAHMVVTG---LHHDLFLSTALISFFATNHRALRHSLRLFSLVTN 74
LL +S + + + H +V+G L +D L T +I+ +A S +F + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSP-DDSRFVFDALRS 148
Query: 75 PDLFLWNAIIKAHSLSPNH-AFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQ 133
+LF WNA+I ++S + + FT+P ++K+CA +GL
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGR 193
+H +VK+ VFV NAL+ FY +A ++F+ MP R+ VS+N MI F G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 194 AGCSMKVLGDM---RGFG-IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDN 249
+ S +LG+M G G PD TLVT+L C+ + +G+ VHG + L
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR--LDKE 326
Query: 250 ALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
+L NAL+DMY+KCGC+ A+ + + N K+VV +W ++V +++ GD + QM
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVV-SWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 310 --GERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALEL 367
G DV K DEV ++ A+ C L
Sbjct: 385 LAGGEDV-------------------------------KADEVTILNAVPVCFHESFLPS 413
Query: 368 GRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIIS 427
+ +H + + N A V YAKCGS+ A VF KT +N++I
Sbjct: 414 LKELHCYSLKQEFV--YNELVANAFVASYAKCGSLSYAQRVFHGIR--SKTVNSWNALIG 469
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKK 475
G A + ++ +M++ GL+PD T +LL AC + GK+
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 173/387 (44%), Gaps = 40/387 (10%)
Query: 61 ALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLK 120
+L ++ R+F + + + WNA+I H+ S + FT LL
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 121 SCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVS 180
+C+ ++ LG ++H ++++ +FV ++L Y + +F+ M + VS
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 181 YNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVY 240
+N +I G+++ G ++ V M +GI+ +++ + ACS L R+GR+ H
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 241 RELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVE 300
+ L L D+A + +L+DMYAK G + + +V +G++ + A+W +++ Y G +
Sbjct: 625 KHL--LEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST--ASWNAMIMGYGIHGLAK 680
Query: 301 VARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECA 360
A +LF++M +G++ PD++ + L+ C
Sbjct: 681 EAIKLFEEMQR----------TGHN---------------------PDDLTFLGVLTACN 709
Query: 361 RLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTI 420
G + G R +L ++ N V+DM + G +D AL V + ++
Sbjct: 710 HSGLIHEGLR-YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 421 LYNSIISGLAHHG---LG-KYAITLFE 443
++ S++S H +G K A LFE
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFE 795
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 120/303 (39%), Gaps = 19/303 (6%)
Query: 271 RVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG-Y 329
++VSG ++ T +++ YA G + +R +FD + +++ W A+IS YS Y
Sbjct: 108 QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELY 167
Query: 330 XXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYA-AENWHCGQN 385
+ PD + CA + + +G +H +K E+ G
Sbjct: 168 DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN- 226
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM 445
A+V Y G + AL +F ++ + +NS+I + +G + + L EM
Sbjct: 227 -----ALVSFYGTHGFVTDALQLF--DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEM 279
Query: 446 RLL----GLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLG 501
+PD T V +L C + G K + ++ ++ ++D+
Sbjct: 280 MEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDMYS 338
Query: 502 RGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVM 561
+ G ++ A +I M N V W ++ GD +++LA D A V
Sbjct: 339 KCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 397
Query: 562 LSN 564
+ N
Sbjct: 398 ILN 400
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/472 (32%), Positives = 242/472 (51%), Gaps = 21/472 (4%)
Query: 165 NAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACS 224
A K+++ MPV+D V+ MI G R GR + + +MR + T T+++
Sbjct: 159 KARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYR 214
Query: 225 SLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVA 284
V R++ ++ + + LL Y G +E AE V K V+A
Sbjct: 215 QNNRVDVARKLFEVMPEKTEVSWTSMLL------GYTLSGRIEDAEEFFE-VMPMKPVIA 267
Query: 285 AWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXX 344
+++ + G++ ARR+FD M +RD +W MI Y G+
Sbjct: 268 C-NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG 326
Query: 345 MKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVV--DMYAKCGSI 402
++P +++ LS CA L +L+ GR++H C + A V MY KCG +
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLV----RCQFDDDVYVASVLMTMYVKCGEL 382
Query: 403 DTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC 462
A VF + S K I++NSIISG A HGLG+ A+ +F EM G +P+ VT +A+L
Sbjct: 383 VKAKLVFDRFSS--KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 463 ACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANA 522
AC ++G ++EG + FESM + + V P +EHY C VD+LGR G + +A LI +M K +A
Sbjct: 441 ACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDA 500
Query: 523 VIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAI 582
+W ALL ACK H ++LA++A ++L E D+ YV+LS++ A + + A VRK +
Sbjct: 501 TVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNM 560
Query: 583 DNVGIQKPPGWSYVEMNGALHKFLAGD-KSHPEAKATELMLRDINMGVKSIG 633
+ K PG S++E+ +H F G K+HPE +ML + ++ G
Sbjct: 561 RTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAG 612
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 38/264 (14%)
Query: 147 VFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
V NA++ + + A +VF+ M RD ++ MI + R G ++ + M+
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGC-LGDNALLVNALVDMYAKCGC 265
G+RP +L+++LS C++L + GRQVH + R C D+ + + L+ MY KCG
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR---CQFDDDVYVASVLMTMYVKCGE 381
Query: 266 LELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYS 325
L A+ V R + W S++S YAS G E A ++F +M +
Sbjct: 382 LVKAKLVFD--RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTM---------- 429
Query: 326 HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQN 385
P++V ++A L+ C+ G LE G I ++
Sbjct: 430 ---------------------PNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTV 468
Query: 386 GGFTCAVVDMYAKCGSIDTALDVF 409
++C VDM + G +D A+++
Sbjct: 469 EHYSCT-VDMLGRAGQVDKAMELI 491
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 12/249 (4%)
Query: 67 RLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYL---LKSCA 123
R+F L+ + D W +IKA+ F +FP L L CA
Sbjct: 286 RVFDLMEDRDNATWRGMIKAYE---RKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
Query: 124 NARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNM 183
+ G Q+H HLV+ +F V+VA+ L+ Y + A VF++ +D + +N
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402
Query: 184 MINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYREL 243
+I+G+ G ++K+ +M G P++ TL+ +L+ACS G ++ + +
Sbjct: 403 IISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKF 462
Query: 244 GCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEV-- 301
C+ + VDM + G ++ A ++ + K W +L+ A + +++
Sbjct: 463 -CVTPTVEHYSCTVDMLGRAGQVDKAMELIESM-TIKPDATVWGALLGACKTHSRLDLAE 520
Query: 302 --ARRLFDQ 308
A++LF+
Sbjct: 521 VAAKKLFEN 529
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 122/309 (39%), Gaps = 61/309 (19%)
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSH---------------- 326
+ +W S+VS Y S G + AR+LFD+M ER+VVSW ++SGY
Sbjct: 48 IGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPE 107
Query: 327 ----------AGYXXXXXXXXXXXXXXXM-KPDEVDVVAALSECARLGALELGRRIHLKY 375
GY M + +EV G ++ R+++
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 376 AAENWHCGQN--GGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG 433
++ N GG + G +D A +F + ++ + + ++I+G +
Sbjct: 168 PVKDVVASTNMIGGL--------CREGRVDEARLIFDEMR--ERNVVTWTTMITGYRQNN 217
Query: 434 LGKYAITLFEEMRLLGLVPDG--VTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQME 491
A LFE M P+ V++ ++L SG +++ ++ FE M P
Sbjct: 218 RVDVARKLFEVM------PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKP 264
Query: 492 HYGCVVDLLGRG--GLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELL 549
C ++G G G +S+A + M + NA WR ++ A + G EL L +L
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNAT-WRGMIKAYERKG-FELEAL---DLF 319
Query: 550 AVEHDHGAR 558
A G R
Sbjct: 320 AQMQKQGVR 328
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 259/489 (52%), Gaps = 19/489 (3%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQMP-VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGI 209
NA++ YC D A VF + P + D +S+N +I G+ + G ++K+ M G+
Sbjct: 197 NAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGL 256
Query: 210 RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELA 269
+ DE++ +L+ SSL+ ++G++VH V + G N + + +VD+Y KCG ++ A
Sbjct: 257 KWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKN-GSYS-NKFVSSGIVDVYCKCGNMKYA 314
Query: 270 ER--VVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
E ++ G N S +S++ Y+S+G + A+RLFD + E+++V WTAM GY +
Sbjct: 315 ESAHLLYGFGNLYSA----SSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 328 GYXXXXXXXXXXXXXXXMK-PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCG--Q 384
PD + +V+ L C+ +E G+ IH + G
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIH----GHSLRTGILM 426
Query: 385 NGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEE 444
+ A VDMY+KCG+++ A +F S ++ T++YN++I+G AHHG + FE+
Sbjct: 427 DKKLVTAFVDMYSKCGNVEYAERIF--DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFED 484
Query: 445 MRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGG 504
M G PD +TF+ALL AC H GLV EG+K F+SM Y ++P+ HY C++DL G+
Sbjct: 485 MTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAY 544
Query: 505 LLSEAYHLILNM-PFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLS 563
L +A L+ + + +AVI A L+AC + + EL K ++LL +E +G+RY+ ++
Sbjct: 545 RLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIA 604
Query: 564 NMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLR 623
N A + DE +R + ++ G S+ ++ H F + D SH E +A ML
Sbjct: 605 NAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLH 664
Query: 624 DINMGVKSI 632
+ + I
Sbjct: 665 FVTKDLSEI 673
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 193/443 (43%), Gaps = 74/443 (16%)
Query: 146 HVFVANALLHFYCVFRDAHNAYKVFEQMPV-RDCVSYNMMINGFVRAGRAGC---SMKVL 201
+V+ NA++ Y F + A ++FE RD ++YN +++GF + GC ++++
Sbjct: 53 NVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTD--GCESEAIEMF 110
Query: 202 GDM---RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
G+M I D++T+ T++ + L + G Q+HG++ + G G V++L+
Sbjct: 111 GEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVK-TGNDG-TKFAVSSLIH 168
Query: 259 MYAKCGCLELAERVVSGVRNGKSV----VAAWTSLVSAYASRGDVEVARRLFDQMGE-RD 313
MY+KCG + V + NG V A ++++AY GD++ A +F + E D
Sbjct: 169 MYSKCGKF----KEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELND 224
Query: 314 VVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHL 373
+SW +I+GY+ GY +K DE A L+ + L +L++G+ +H
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 374 KYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILY--------NSI 425
+ + N + +VD+Y KCG++ A + +LY +S+
Sbjct: 285 RVLKNGSY--SNKFVSSGIVDVYCKCGNMKYA----------ESAHLLYGFGNLYSASSM 332
Query: 426 ISGLAHHGLGKYAITLFEEMRLLGLV--------------------------------PD 453
I G + G A LF+ + LV PD
Sbjct: 333 IVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPD 392
Query: 454 GVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLI 513
+ V++L AC ++ GK+ S G+ + VD+ + G + A I
Sbjct: 393 SLVMVSVLGACSLQAYMEPGKE-IHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYA-ERI 450
Query: 514 LNMPFKANAVIWRALLSACKVHG 536
+ F+ + V++ A+++ C HG
Sbjct: 451 FDSSFERDTVMYNAMIAGCAHHG 473
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 23/261 (8%)
Query: 250 ALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
A+ N LV++Y+K G L A V + RN V +W ++++AY +V+ AR LF+
Sbjct: 23 AVSSNQLVNLYSKSGLLREARNVFDEMLERN----VYSWNAVIAAYVKFNNVKEARELFE 78
Query: 308 QMG-ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPD----EVDVVAALSECARL 362
ERD++++ ++SG++ K D + V + A+L
Sbjct: 79 SDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKL 138
Query: 363 GALELGRRIHLKYAAENWHCGQNGGFTCAV---VDMYAKCGSIDTALDVFCKTSKDKKTT 419
+ G ++H N G AV + MY+KCG ++F + + +
Sbjct: 139 TNVFYGEQLHGVLVKTG-----NDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDS 193
Query: 420 ILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFES 479
+ N++I+ G A+++F L D +++ L+ +G +E K S
Sbjct: 194 VARNAMIAAYCREGDIDKALSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 480 MSTVYGVNPQMEHYGCVVDLL 500
M G+ +G V+++L
Sbjct: 251 MEE-NGLKWDEHSFGAVLNVL 270
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 2/181 (1%)
Query: 44 DLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH-SLSPNHAFXXXXXXX 102
+L+ ++++I +++ + + + RLF ++ +L +W A+ + +L +
Sbjct: 325 NLYSASSMIVGYSSQGKMVE-AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF 383
Query: 103 XXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRD 162
+L +C+ G ++H H +++ + A + Y +
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGN 443
Query: 163 AHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA 222
A ++F+ RD V YN MI G G S + DM G +PDE T + LLSA
Sbjct: 444 VEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Query: 223 C 223
C
Sbjct: 504 C 504
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 172/587 (29%), Positives = 289/587 (49%), Gaps = 24/587 (4%)
Query: 19 LASSCRTIQQALQ---IQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNP 75
L SC + +Q + A +V TG D+F +TAL+S + + + +L++ +
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMY-MKVKQVTDALKVLDEMPER 95
Query: 76 DLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLH 135
+ NA + + T +L C + G+QLH
Sbjct: 96 GIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLH 152
Query: 136 CHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAG 195
C +KS F V+V +L+ Y + A ++FE++P + V+YN I+G + G
Sbjct: 153 CLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMN 212
Query: 196 CSMKVLGDMRGFGIR-PDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN 254
V MR F P++ T V ++AC+SL + + GRQ+HGLV ++ ++
Sbjct: 213 LVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE--FQFETMVGT 270
Query: 255 ALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER-- 312
AL+DMY+KC C + A V + +++ +++++ W S++S G E A LF+++
Sbjct: 271 ALIDMYSKCRCWKSAYIVFTELKDTRNLIS-WNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 313 --DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR 370
D +W ++ISG+S G M P + + LS C+ + L+ G+
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 371 IH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIIS 427
IH +K AAE ++ +++DMY KCG A +F + K + +N +IS
Sbjct: 390 IHGHVIKAAAE-----RDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVN 487
G HG + AI +FE +R + P TF A+L AC H G V++G + F M YG
Sbjct: 445 GYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK 504
Query: 488 PQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQE 547
P EH GC++DLLGR G L EA +I M +++V +LL +C+ H D L + A +
Sbjct: 505 PSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMK 563
Query: 548 LLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWS 594
L +E ++ A +V+LS++ A +++ ++ S+R+ ID + K PG S
Sbjct: 564 LAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 177/389 (45%), Gaps = 46/389 (11%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
FTFP LLKSCA G LH +VK+ F VF A AL+ Y + +A KV ++
Sbjct: 32 FTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDE 91
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
MP R S N ++G + G + ++ GD R G + T+ ++L C +E G
Sbjct: 92 MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---G 148
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
Q+H L + + +LV MY++CG W
Sbjct: 149 MQLHCLAMK--SGFEMEVYVGTSLVSMYSRCG--------------------EWV----- 181
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXX-XXXXXXXXMKPDEVD 351
+A R+F+++ + VV++ A ISG G +P++V
Sbjct: 182 --------LAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVT 233
Query: 352 VVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK 411
V A++ CA L L+ GR++H + + G A++DMY+KC +A VF +
Sbjct: 234 FVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG--TALIDMYSKCRCWKSAYIVFTE 291
Query: 412 TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVD 471
KD + I +NS+ISG+ +G + A+ LFE++ GL PD T+ +L+ G V
Sbjct: 292 L-KDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVI 350
Query: 472 EGKKPFESMSTVYGVNPQMEHYGCVVDLL 500
E K FE M +V V P ++ C+ LL
Sbjct: 351 EAFKFFERMLSVVMV-PSLK---CLTSLL 375
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 175/599 (29%), Positives = 281/599 (46%), Gaps = 46/599 (7%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS-L 89
Q+ A ++ L ALI+ + ++ + + R+F + DL W++II S L
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQ-MSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 90 SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFV 149
+ F LK+C++ P G Q+H +KS +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 150 ANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGI 209
+L Y ++A +VF+Q+ D S+N++I G G A ++ V MR G
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 210 RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELA 269
PD +L +LL A + G Q+H + + G L D + N+L+ MY C L
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLAD-LTVCNSLLTMYTFCSDLYCC 425
Query: 270 ERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY 329
+ RN V+ W ++++A RLF M +VS
Sbjct: 426 FNLFEDFRNNADSVS-WNTILTACLQHEQPVEMLRLFKLM----LVS------------- 467
Query: 330 XXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNG 386
+PD + + L C + +L+LG ++H LK +NG
Sbjct: 468 --------------ECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNG 513
Query: 387 GFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR 446
++DMYAKCGS+ A +F S D + + ++++I G A G G+ A+ LF+EM+
Sbjct: 514 -----LIDMYAKCGSLGQARRIF--DSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Query: 447 LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLL 506
G+ P+ VTFV +L AC H GLV+EG K + +M T +G++P EH CVVDLL R G L
Sbjct: 567 SAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRL 626
Query: 507 SEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNML 566
+EA I M + + V+W+ LLSACK G+V LA+ A + +L ++ + +V+L +M
Sbjct: 627 NEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMH 686
Query: 567 ADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDI 625
A + AA +R ++ ++K PG S++E+ +H F A D HPE +L +I
Sbjct: 687 ASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/538 (24%), Positives = 232/538 (43%), Gaps = 44/538 (8%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLW 80
SS R++ Q +I H++ + +D L+ ++S + +LR + +F + +L +
Sbjct: 78 SSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCG-SLRDAREVFDFMPERNLVSY 136
Query: 81 NAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVK 140
++I +S + A F F ++K+CA++ LG QLH ++K
Sbjct: 137 TSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK 196
Query: 141 SRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKV 200
SH+ NAL+ Y F +A +VF +P++D +S++ +I GF + G ++
Sbjct: 197 LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSH 256
Query: 201 LGDMRGFGI-RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDM 259
L +M FG+ P+EY + L ACSSL G Q+HGL + L NA+ +L DM
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE--LAGNAIAGCSLCDM 314
Query: 260 YAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTA 319
YA+CG L A RV FDQ+ D SW
Sbjct: 315 YARCGFLNSARRV---------------------------------FDQIERPDTASWNV 341
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
+I+G ++ GY PD + + + L + AL G +IH Y +
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH-SYIIK- 399
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAI 439
W + +++ MY C + ++F + ++ ++ +N+I++ H +
Sbjct: 400 WGFLADLTVCNSLLTMYTFCSDLYCCFNLF-EDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 440 TLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDL 499
LF+ M + PD +T LL C + G + S G+ P+ ++D+
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLIDM 517
Query: 500 LGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLA--VEHDH 555
+ G L +A + +M + + V W L+ G E A + +E+ + +E +H
Sbjct: 518 YAKCGSLGQARRIFDSMDNR-DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 208/444 (46%), Gaps = 66/444 (14%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
T+ L+ +C+++R+ G ++H H++ S + N +L Y +A +VF+ M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
P R+ VSY +I G+ + G+ ++++ M + PD++ +++ AC+S D +G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 234 QVHGLVYRELGCLGDNALLV--NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVS 291
Q+H V + L ++ L+ NAL+ MY + + A RV G+
Sbjct: 189 QLHAQVIK----LESSSHLIAQNALIAMYVRFNQMSDASRVFYGI--------------- 229
Query: 292 AYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXX-XXXXXXXXXMKPDEV 350
+D++SW+++I+G+S G+ P+E
Sbjct: 230 ------------------PMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 271
Query: 351 DVVAALSECARLGALELGRRIH-LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
++L C+ L + G +IH L +E N C++ DMYA+CG +++A VF
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSE---LAGNAIAGCSLCDMYARCGFLNSARRVF 328
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+ ++ T +N II+GLA++G A+++F +MR G +PD ++ +LLCA
Sbjct: 329 DQI--ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA------ 380
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSE---------AYHLILNMPFKA 520
KP ++S ++ + +G + DL LL+ ++L + A
Sbjct: 381 ---QTKPM-ALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA 436
Query: 521 NAVIWRALLSACKVHGD-VELAKL 543
++V W +L+AC H VE+ +L
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRL 460
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 144/310 (46%), Gaps = 6/310 (1%)
Query: 15 VKALLASSCR--TIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFS-L 71
+++LL + + + Q +QI ++++ G DL + +L++ + T L LF
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMY-TFCSDLYCCFNLFEDF 432
Query: 72 VTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLG 131
N D WN I+ A T LL+ C + LG
Sbjct: 433 RNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG 492
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRA 191
Q+HC+ +K+ F+ N L+ Y A ++F+ M RD VS++ +I G+ ++
Sbjct: 493 SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQS 552
Query: 192 GRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNAL 251
G ++ + +M+ GI P+ T V +L+ACS + G +++ + E G +
Sbjct: 553 GFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG-ISPTKE 611
Query: 252 LVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE 311
+ +VD+ A+ G L AER + ++ VV W +L+SA ++G+V +A++ + + +
Sbjct: 612 HCSCVVDLLARAGRLNEAERFIDEMKLEPDVV-VWKTLLSACKTQGNVHLAQKAAENILK 670
Query: 312 RDVVSWTAMI 321
D + TA +
Sbjct: 671 IDPFNSTAHV 680
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
++ + C+ +L GR+IH N C + ++ MY KCGS+ A +VF
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSN--CKYDTILNNHILSMYGKCGSLRDAREVF--D 126
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
++ + Y S+I+G + +G G AI L+ +M LVPD F +++ AC S V
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 473 GKK------PFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWR 526
GK+ ES S + N + Y R +S+A + +P K + + W
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMY-------VRFNQMSDASRVFYGIPMK-DLISWS 238
Query: 527 ALLSACKVHGDVELAKLA-CQELLAVEHDHGARYVMLSNMLA 567
++++ G E L+ +E+L+ H Y+ S++ A
Sbjct: 239 SIIAGFSQLG-FEFEALSHLKEMLSFGVFHPNEYIFGSSLKA 279
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 250/514 (48%), Gaps = 43/514 (8%)
Query: 123 ANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYN 182
A++ P ++H ++++ F + LL V D A +VF++M +N
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN 78
Query: 183 MMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRE 242
+ G+VR S+ + MR G+RPDE+T ++ A S L D G +H V +
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 243 -LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEV 301
GCLG +VA T LV Y G++
Sbjct: 139 GFGCLG----------------------------------IVA--TELVMMYMKFGELSS 162
Query: 302 ARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECAR 361
A LF+ M +D+V+W A ++ G ++ D VV+ LS C +
Sbjct: 163 AEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQ 222
Query: 362 LGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL 421
LG+LE+G I+ + E C N A +DM+ KCG+ + A +F ++ +
Sbjct: 223 LGSLEIGEEIYDRARKEEIDC--NIIVENARLDMHLKCGNTEAARVLF--EEMKQRNVVS 278
Query: 422 YNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM- 480
++++I G A +G + A+TLF M+ GL P+ VTF+ +L AC H+GLV+EGK+ F M
Sbjct: 279 WSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMV 338
Query: 481 -STVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVE 539
S + P+ EHY C+VDLLGR GLL EAY I MP + + IW ALL AC VH D+
Sbjct: 339 QSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMI 398
Query: 540 LAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMN 599
L + L+ D G+ +V+LSN+ A + D VR + +G +K +S VE
Sbjct: 399 LGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFE 458
Query: 600 GALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
G +H F GDKSHP++KA L +I ++ +G
Sbjct: 459 GKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMG 492
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 11/316 (3%)
Query: 18 LLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDL 77
LL +S +Q +I A ++ TG L T L+ + ++ ++F + P +
Sbjct: 16 LLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIG-DMCYARQVFDEMHKPRI 74
Query: 78 FLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCH 137
FLWN + K + + FT+P+++K+ + G LH H
Sbjct: 75 FLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAH 134
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCS 197
+VK F VA L+ Y F + +A +FE M V+D V++N + V+ G + +
Sbjct: 135 VVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYR-ELGCLGDNALLVNAL 256
++ M ++ D +T+V++LSAC L +G +++ + E+ C N ++ NA
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC---NIIVENAR 251
Query: 257 VDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER---- 312
+DM+ KCG E A RV+ ++VV +W++++ YA GD A LF M
Sbjct: 252 LDMHLKCGNTE-AARVLFEEMKQRNVV-SWSTMIVGYAMNGDSREALTLFTTMQNEGLRP 309
Query: 313 DVVSWTAMISGYSHAG 328
+ V++ ++S SHAG
Sbjct: 310 NYVTFLGVLSACSHAG 325
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 244/489 (49%), Gaps = 47/489 (9%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCV-----FRDAHNAYKVFEQMPVRDCVSYNMMING 187
++H H++ + H + N LL F V A + F+ P +N +I G
Sbjct: 23 KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTS--DWNYLIRG 80
Query: 188 FVRAGRAGCSMKVLGDMRGFGI-RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCL 246
F + S+ M + RPD +T L +C ++ ++HG V R G L
Sbjct: 81 FSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRS-GFL 139
Query: 247 GDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLF 306
D ++VA TSLV Y++ G VE+A ++F
Sbjct: 140 DD--------------------------------AIVA--TSLVRCYSANGSVEIASKVF 165
Query: 307 DQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALE 366
D+M RD+VSW MI +SH G + D +VA LS CA + AL
Sbjct: 166 DEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALN 225
Query: 367 LGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSII 426
+G +H A + C + A++DMYAKCGS++ A+ VF K+ + +NS+I
Sbjct: 226 MGVMLH--RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVF--NGMRKRDVLTWNSMI 281
Query: 427 SGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGV 486
G HG G AI+ F +M G+ P+ +TF+ LL C H GLV EG + FE MS+ + +
Sbjct: 282 IGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHL 341
Query: 487 NPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQ 546
P ++HYGC+VDL GR G L + +I + V+WR LL +CK+H ++EL ++A +
Sbjct: 342 TPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMK 401
Query: 547 ELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFL 606
+L+ +E + YV+++++ + + AS+RK I + +Q PGWS++E+ +HKF+
Sbjct: 402 KLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFV 461
Query: 607 AGDKSHPEA 615
DK HPE+
Sbjct: 462 VDDKMHPES 470
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 185/406 (45%), Gaps = 45/406 (11%)
Query: 14 RVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATN-HRALRHSLRLFS-L 71
RV + C ++++ +I +H+++ GL H + L+ F A + +L H+ LF
Sbjct: 6 RVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHF 65
Query: 72 VTNPDLFLWNAIIK--AHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPH 129
++P WN +I+ ++S SP ++ FTF + LKSC ++
Sbjct: 66 DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDL-FTFNFALKSCERIKSIP 124
Query: 130 LGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFV 189
L++H +++S F VA +L+ Y A KVF++MPVRD VS+N+MI F
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFS 184
Query: 190 RAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLV--YRELGCLG 247
G ++ + M G+ D YTLV LLS+C+ + +G +H + R C+
Sbjct: 185 HVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV- 243
Query: 248 DNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
+ NAL+DMYAKCG LE A V +G+R K V W S++ Y G A F
Sbjct: 244 ---FVSNALIDMYAKCGSLENAIGVFNGMR--KRDVLTWNSMIIGYGVHGHGVEAISFFR 298
Query: 308 QMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALEL 367
+M + SG ++P+ + + L C+ G ++
Sbjct: 299 KM----------VASG---------------------VRPNAITFLGLLLGCSHQGLVKE 327
Query: 368 GRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTS 413
G H + + +H N +VD+Y + G ++ +L++ +S
Sbjct: 328 GVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASS 372
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 177/660 (26%), Positives = 297/660 (45%), Gaps = 82/660 (12%)
Query: 29 ALQIQAHMVVTGLHH-DLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH 87
L I ++ GL + D + +A + F+ +L + +LF + D WN I+ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYG-RCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 88 SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
S N T LL+ C+N G Q+H ++++ S+V
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVR------------------------------- 176
+ N+L+ Y + KVF M R
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 177 ----DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
D V++N +++G+ G + ++ VL M+ G++P ++ +LL A + ++G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVA-------- 284
+ +HG + R L + + L+DMY K G L A R+V + + K++VA
Sbjct: 245 KAIHGYILRNQ--LWYDVYVETTLIDMYIKTGYLPYA-RMVFDMMDAKNIVAWNSLVSGL 301
Query: 285 --------------------------AWTSLVSAYASRGDVEVARRLFDQMGER----DV 314
W SL S YA+ G E A + +M E+ +V
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLK 374
VSWTA+ SG S G + P+ + L L L G+ +H
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
+N C + A+VDMY K G + +A+++F K+ +N ++ G A G
Sbjct: 422 CLRKNLIC--DAYVATALVDMYGKSGDLQSAIEIFWGIKN--KSLASWNCMLMGYAMFGR 477
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
G+ I F M G+ PD +TF ++L C +SGLV EG K F+ M + YG+ P +EH
Sbjct: 478 GEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCS 537
Query: 495 CVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHD 554
C+VDLLGR G L EA+ I M K +A IW A LS+CK+H D+ELA++A + L +E
Sbjct: 538 CMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPH 597
Query: 555 HGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPE 614
+ A Y+M+ N+ +++++ ++ +R + N ++ WS+++++ +H F A K+HP+
Sbjct: 598 NSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPD 657
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 200/399 (50%), Gaps = 28/399 (7%)
Query: 130 LGLQLHCHLVKSRF-HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGF 188
LGL +H L+K +S V +A + FY A K+F++MP RD +++N ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 189 VRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGD 248
+R+G ++++ +M+ G + + T+V LL CS+ E GRQ+HG V R LG L
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR-LG-LES 122
Query: 249 NALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQ 308
N + N+L+ MY++ G LEL+ +V + +++ +++W S++S+Y G V+ A L D+
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN--LSSWNSILSSYTKLGYVDDAIGLLDE 180
Query: 309 MG----ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGA 364
M + D+V+W +++SGY+ G +KP + + L A G
Sbjct: 181 MEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 365 LELGRRIHLKYAAEN--WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILY 422
L+LG+ IH Y N W+ + ++DMY K G + A VF D K + +
Sbjct: 241 LKLGKAIH-GYILRNQLWY---DVYVETTLIDMYIKTGYLPYARMVF--DMMDAKNIVAW 294
Query: 423 NSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMST 482
NS++SGL++ L K A L M G+ PD +T+ +L A G++ L KP +++
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL--ASGYATL----GKPEKALDV 348
Query: 483 V-----YGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM 516
+ GV P + + + + G A + + M
Sbjct: 349 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 387
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 118/301 (39%), Gaps = 6/301 (1%)
Query: 6 ASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFAT---NHRAL 62
A + +++ + + L+ +C ++ A + M G+ D +L S +AT +AL
Sbjct: 288 AKNIVAWNSLVSGLSYAC-LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 63 RHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSC 122
++ P++ W AI S + N T LLK
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Query: 123 ANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYN 182
H G ++H ++ +VA AL+ Y D +A ++F + + S+N
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWN 466
Query: 183 MMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRE 242
M+ G+ GR + M G+ PD T ++LS C + + G + L+
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR 526
Query: 243 LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVA 302
G + + +VD+ + G L+ A + + + K W + +S+ D+E+A
Sbjct: 527 YGII-PTIEHCSCMVDLLGRSGYLDEAWDFIQTM-SLKPDATIWGAFLSSCKIHRDLELA 584
Query: 303 R 303
Sbjct: 585 E 585
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 259/525 (49%), Gaps = 17/525 (3%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
T+ L++ C+ R G ++H H+ S F + + N LL Y +A KVF++M
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
P RD S+N+M+NG+ G + K+ +M D Y+ +++ +
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSG-VRNG-KSVVAAWTSLVS 291
++ L+ R + N V+ V A C+ + + VR G S W+SL+
Sbjct: 203 VLYSLMQR-VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 292 AYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVD 351
Y G ++ AR +FD++ E+DVVSWT+MI Y + +P+E
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 352 VVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDV 408
L+ CA L ELG+++H + + + + ++VDMY KCG+I++A V
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA-----SSSLVDMYTKCGNIESAKHV 376
Query: 409 FCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSG 468
K + + S+I G A +G A+ F+ + G PD VTFV +L AC H+G
Sbjct: 377 V--DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Query: 469 LVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRAL 528
LV++G + F S++ + ++ +HY C+VDLL R G + +I MP K + +W ++
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Query: 529 LSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQ 588
L C +G+++LA+ A QEL +E ++ YV ++N+ A + +E +RK + +G+
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
Query: 589 KPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
K PG S+ E+ H F+A D SHP LR++ +K G
Sbjct: 555 KRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 599
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 164/369 (44%), Gaps = 20/369 (5%)
Query: 183 MMINGFVRAGRAG------CSMKVLGD---MRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
+++ RA R G C K+L + + G +P T L+ CS G+
Sbjct: 46 VVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGK 105
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
+VH + R G + ++ N L+ MYAKCG L A +V + N + +W +V+ Y
Sbjct: 106 KVHEHI-RTSGFV-PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRD--LCSWNVMVNGY 161
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXX-XXXXXXXXXXXMKPDEVDV 352
A G +E AR+LFD+M E+D SWTAM++GY +P+ V
Sbjct: 162 AEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTV 221
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
A++ A + + G+ IH + +++DMY KCG ID A ++F K
Sbjct: 222 SIAVAAAAAVKCIRRGKEIHGHIVRAG--LDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
+K + + S+I + +LF E+ P+ TF +L AC +
Sbjct: 280 V--EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEEL 337
Query: 473 GKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSAC 532
GK+ M+ V G +P +VD+ + G + A H++ P K + V W +L+ C
Sbjct: 338 GKQVHGYMTRV-GFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGC 395
Query: 533 KVHGDVELA 541
+G + A
Sbjct: 396 AQNGQPDEA 404
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 182/427 (42%), Gaps = 47/427 (11%)
Query: 62 LRHSLRLFSLVTNPDLFLWNAIIKAH--SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLL 119
L + +LF +T D + W A++ + P A FT +
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNI-FTVSIAV 225
Query: 120 KSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCV 179
+ A + G ++H H+V++ S + ++L+ Y A +F+++ +D V
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Query: 180 SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLV 239
S+ MI+ + ++ R + ++ G RP+EYT +L+AC+ L + +G+QVHG +
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 240 YRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDV 299
R +G + ++LVDMY KCG +E A+ VV G K + +WTSL+ A G
Sbjct: 346 TR-VG-FDPYSFASSSLVDMYTKCGNIESAKHVVDGC--PKPDLVSWTSLIGGCAQNGQP 401
Query: 300 EVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSEC 359
+ A + FD + + SG KPD V V LS C
Sbjct: 402 DEALKYFDLL----------LKSG---------------------TKPDHVTFVNVLSAC 430
Query: 360 ARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTT 419
G +E G ++ + +TC +VD+ A+ G + V + K +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTC-LVDLLARSGRFEQLKSVISEMPM-KPSK 488
Query: 420 ILYNSIISGLAHHGLGKYAITLFEE--MRLLGLVPDG-VTFVALLCACGHSGLVDEGKKP 476
L+ S++ G + +G I L EE L + P+ VT+V + +G +E K
Sbjct: 489 FLWASVLGGCSTYG----NIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKM 544
Query: 477 FESMSTV 483
+ M +
Sbjct: 545 RKRMQEI 551
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 254/486 (52%), Gaps = 17/486 (3%)
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
L+ N+ P G ++H ++K+ F + ++ LL + A +VF+++P
Sbjct: 41 LQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTL 100
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSS-----LEDQRVGR 233
+YN MI+G+++ G + ++ M G + D YTL +L A +S + + + R
Sbjct: 101 SAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCR 160
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
VH + + L D +L+ ALVD Y K G LE A V +++ V TS++S Y
Sbjct: 161 LVHARIIKCDVELDD--VLITALVDTYVKSGKLESARTVFETMKDEN--VVCCTSMISGY 216
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXX-MKPDEVDV 352
++G VE A +F+ +D+V + AM+ G+S +G P+
Sbjct: 217 MNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTF 276
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
+ + C+ L + E+G+++H + + G +++DMYAKCG I+ A VF +
Sbjct: 277 ASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMG--SSLLDMYAKCGGINDARRVFDQM 334
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
+K + S+I G +G + A+ LF M+ + P+ VTF+ L AC HSGLVD+
Sbjct: 335 --QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDK 392
Query: 473 GKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSAC 532
G + FESM Y + P+MEHY C+VDL+GR G L++A+ MP + ++ IW ALLS+C
Sbjct: 393 GYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSC 452
Query: 533 KVHGDVELAKLACQELLAVEHDH--GARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKP 590
+HG+VELA +A EL + D GA Y+ LSN+ A D+ D + +R+ + I K
Sbjct: 453 NLHGNVELASIAASELFKLNADKRPGA-YLALSNVYASNDKWDNVSKIREVMKRRRISKT 511
Query: 591 PGWSYV 596
G S+
Sbjct: 512 IGRSWT 517
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 8/257 (3%)
Query: 49 TALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXX 108
T++IS + N + + +F+ D+ ++NA+++ S S A
Sbjct: 210 TSMISGY-MNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAG 268
Query: 109 XXXXF-TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAY 167
TF ++ +C+ + +G Q+H ++KS ++H+ + ++LL Y ++A
Sbjct: 269 FHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDAR 328
Query: 168 KVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSAC--SS 225
+VF+QM ++ S+ MI+G+ + G ++++ M+ F I P+ T + LSAC S
Sbjct: 329 RVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSG 388
Query: 226 LEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAA 285
L D+ G ++ + R+ + +VD+ + G L A + +
Sbjct: 389 LVDK--GYEIFESMQRDYS-MKPKMEHYACIVDLMGRAGDLNKAFEFARAMPE-RPDSDI 444
Query: 286 WTSLVSAYASRGDVEVA 302
W +L+S+ G+VE+A
Sbjct: 445 WAALLSSCNLHGNVELA 461
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 163/510 (31%), Positives = 253/510 (49%), Gaps = 41/510 (8%)
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
+V ++++ YC + D AY++F +MP R+ VS+ MI+GF ++ + +
Sbjct: 228 EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLE 287
Query: 204 MRGF--GIRPDEYTLVTLLSACSSL--EDQRVGRQVHGLV-------------------- 239
M+ + P+ TL++L AC L E +R+G Q+H V
Sbjct: 288 MKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVH 347
Query: 240 -YRELGCLGDNALLVNALVDM---------YAKCGCLELAERVVSGVRNGKSVVAAWTSL 289
Y G + L+N D+ Y K G LE AE + V++ V+ WTS+
Sbjct: 348 MYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVS-WTSM 406
Query: 290 VSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE 349
+ Y GDV A LF ++ ++D V+WT MISG +KP
Sbjct: 407 IDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLN 466
Query: 350 VDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
LS L+ G+ IH A + ++V MYAKCG+I+ A ++F
Sbjct: 467 STYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIF 526
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
K + K T+ +NS+I GL+HHGL A+ LF+EM G P+ VTF+ +L AC HSGL
Sbjct: 527 AKMVQ--KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
+ G + F++M Y + P ++HY ++DLLGR G L EA I +PF + ++ ALL
Sbjct: 585 ITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALL 644
Query: 530 SACKVH---GDVE-LAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNV 585
C ++ D E +A+ A LL ++ + +V L N+ A + +HD +RK +
Sbjct: 645 GLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIK 704
Query: 586 GIQKPPGWSYVEMNGALHKFLAGDKSHPEA 615
G++K PG S+V +NG + FL+GDKS EA
Sbjct: 705 GVKKTPGCSWVVVNGRANVFLSGDKSASEA 734
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 172/382 (45%), Gaps = 42/382 (10%)
Query: 146 HVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMR 205
++ NA+L Y R + A+ +F +MP ++ VS+ +M+ GR+ ++++ +M
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC 265
+ + TL++ D +QV + + + NA++ Y +
Sbjct: 166 ERNV----VSWNTLVTGLIRNGDMEKAKQVFDAMPSR------DVVSWNAMIKGYIENDG 215
Query: 266 LELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYS 325
+E A +++ G + K+VV WTS+V Y GDV A RLF +M ER++VSWTAMISG++
Sbjct: 216 MEEA-KLLFGDMSEKNVVT-WTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFA 273
Query: 326 HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSE--------CARLGA--LELGRRIHLKY 375
MK D VD V+ E C LG LG ++H +
Sbjct: 274 W-----NELYREALMLFLEMKKD-VDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 327
Query: 376 AAENWHC-GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
+ W +G ++V MYA G I +A + ++ + I+ N + +G
Sbjct: 328 ISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLK----NGD 383
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
+ A TLFE ++ L D V++ +++ +G V F+ + GV +
Sbjct: 384 LERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WT 435
Query: 495 CVVDLLGRGGLLSEAYHLILNM 516
++ L + L +EA L+ +M
Sbjct: 436 VMISGLVQNELFAEAASLLSDM 457
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSR--FHSHVFVANALLHFYCVFRDAHNAYKVFE 171
T+ LL S G +HC + K+ + + + N+L+ Y +AY++F
Sbjct: 468 TYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFA 527
Query: 172 QMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACS 224
+M +D VS+N MI G G A ++ + +M G +P+ T + +LSACS
Sbjct: 528 KMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS 580
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 169/632 (26%), Positives = 293/632 (46%), Gaps = 49/632 (7%)
Query: 32 IQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSP 91
+ ++V +GL +F++++L + L + ++F + + + WNA++ + +
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCG-VLDDASKVFDEIPDRNAVAWNALMVGYVQNG 253
Query: 92 NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVAN 151
+ T L + AN G Q H + + +
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 152 ALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRP 211
+LL+FYC A VF++M +D V++N++I+G+V+ G ++ + MR ++
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 212 DEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAER 271
D TL TL+SA + E+ ++G++V R + +L + ++DMYAKCG + A++
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRH--SFESDIVLASTVMDMYAKCGSIVDAKK 431
Query: 272 VVSGVRNGKSVVAAWTSLVSAYAS-----------------------------------R 296
V ++ W +L++AYA
Sbjct: 432 VFDSTVEKDLIL--WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 297 GDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
G V+ A+ +F QM +++SWT M++G G ++P+ +
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
ALS CA L +L +GR IH Y N ++VDMYAKCG I+ A VF
Sbjct: 550 TVALSACAHLASLHIGRTIH-GYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF--G 606
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
SK L N++IS A +G K AI L+ + +GL PD +T +L AC H+G +++
Sbjct: 607 SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQ 666
Query: 473 GKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSAC 532
+ F + + + P +EHYG +VDLL G +A LI MPFK +A + ++L+++C
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASC 726
Query: 533 KVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPG 592
EL ++LL E ++ YV +SN A DE +R+ + G++K PG
Sbjct: 727 NKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 786
Query: 593 WSYVEMNG--ALHKFLAGDKSHPEAKATELML 622
S++++ G +H F+A DK+H ++ML
Sbjct: 787 CSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 232/517 (44%), Gaps = 52/517 (10%)
Query: 24 RTIQQALQIQAHMVVTGLHH--DLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWN 81
R + QI A ++ G + + ++ T L+ F+A AL + LFS + ++F W
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCD-ALEIAEVLFSKLRVRNVFSWA 142
Query: 82 AIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKS 141
AII F P + K+C + G +H ++VKS
Sbjct: 143 AIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS 202
Query: 142 RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVL 201
VFVA++L Y +A KVF+++P R+ V++N ++ G+V+ G+ ++++
Sbjct: 203 GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLF 262
Query: 202 GDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYA 261
DMR G+ P T+ T LSA +++ G+Q H + G DN +L +L++ Y
Sbjct: 263 SDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN-GMELDN-ILGTSLLNFYC 320
Query: 262 KCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMI 321
K G +E AE V R + V W ++S Y +G VE A + M
Sbjct: 321 KVGLIEYAEMVFD--RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM------------ 366
Query: 322 SGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAE 378
+K D V + +S AR L+LG+ + ++++ E
Sbjct: 367 -------------------RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFE 407
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
+ + V+DMYAKCGSI A VF T +K IL+N++++ A GL A
Sbjct: 408 S-----DIVLASTVMDMYAKCGSIVDAKKVFDSTV--EKDLILWNTLLAAYAESGLSGEA 460
Query: 439 ITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVD 498
+ LF M+L G+ P+ +T+ ++ + +G VDE K F M + G+ P + + +++
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS-SGIIPNLISWTTMMN 519
Query: 499 LLGRGGLLSEAYHLILNMP---FKANAVIWRALLSAC 532
+ + G EA + M + NA LSAC
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 134/349 (38%), Gaps = 51/349 (14%)
Query: 203 DMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAK 262
D R I P+ Y +L C D G+Q+H + + N + LV YAK
Sbjct: 62 DFRNLRIGPEIYG--EILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAK 119
Query: 263 CGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMIS 322
C LE +A LF ++ R+V SW A+I
Sbjct: 120 CDALE---------------------------------IAEVLFSKLRVRNVFSWAAIIG 146
Query: 323 GYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHC 382
G + PD V C L GR +H +
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVH-------GYV 199
Query: 383 GQNGGFTCAVV-----DMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKY 437
++G C V DMY KCG +D A VF + + + +N+++ G +G +
Sbjct: 200 VKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIP--DRNAVAWNALMVGYVQNGKNEE 257
Query: 438 AITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
AI LF +MR G+ P VT L A + G V+EGK+ +++ V G+ ++
Sbjct: 258 AIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS-HAIAIVNGMELDNILGTSLL 316
Query: 498 DLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQ 546
+ + GL+ A ++ + F+ + V W ++S G VE A CQ
Sbjct: 317 NFYCKVGLIEYA-EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQ 364
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 242/473 (51%), Gaps = 24/473 (5%)
Query: 133 QLHCHLVKSRFHSHVFVANALL-HFYCV---FRDAHNAYKVFEQMPVRDCVSYNMMINGF 188
++H HL++ H +N LL HF + ++ A +VF + + + +N MI +
Sbjct: 22 EIHAHLLRHFLHG----SNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCY 77
Query: 189 VRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRE-LGCLG 247
G S+ M+ GI DEYT LL +CSSL D R G+ VHG + R LG
Sbjct: 78 SLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLG 137
Query: 248 DNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
+ +V++Y G + A++V + VV W ++ + GDVE LF
Sbjct: 138 KIRI---GVVELYTSGGRMGDAQKVFDEMSERNVVV--WNLMIRGFCDSGDVERGLHLFK 192
Query: 308 QMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALEL 367
QM ER +VSW +MIS S G PDE VV L A LG L+
Sbjct: 193 QMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDT 252
Query: 368 GRRIHLKYAAENWHCGQNGGFTC---AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNS 424
G+ IH AE+ G F A+VD Y K G ++ A +F K ++ + +N+
Sbjct: 253 GKWIH--STAES--SGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM--QRRNVVSWNT 306
Query: 425 IISGLAHHGLGKYAITLFEEMRLLGLV-PDGVTFVALLCACGHSGLVDEGKKPFESMSTV 483
+ISG A +G G++ I LF+ M G V P+ TF+ +L C ++G V+ G++ F M
Sbjct: 307 LISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER 366
Query: 484 YGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKL 543
+ + + EHYG +VDL+ R G ++EA+ + NMP ANA +W +LLSAC+ HGDV+LA++
Sbjct: 367 FKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEV 426
Query: 544 ACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYV 596
A EL+ +E + YV+LSN+ A+ + + VR + ++K G S +
Sbjct: 427 AAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 178/448 (39%), Gaps = 85/448 (18%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHS---LRLFSLVTNPDLFLWNAIIKAH 87
+I AH+ L H L S L++ F + +L +S R+FS + NP++ ++NA+IK +
Sbjct: 22 EIHAHL----LRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCY 77
Query: 88 SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFH--- 144
SL +T+ LLKSC++ G +H L+++ FH
Sbjct: 78 SLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLG 137
Query: 145 ----------------------------SHVFVANALLHFYCVFRDAHNAYKVFEQMPVR 176
+V V N ++ +C D +F+QM R
Sbjct: 138 KIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER 197
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVH 236
VS+N MI+ + GR ++++ +M G PDE T+VT+L +SL G+ +H
Sbjct: 198 SIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIH 257
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASR 296
G D + NALVD Y K G LE A + ++ + V +W +L+S A
Sbjct: 258 STAESS-GLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ--RRNVVSWNTLISGSAVN 314
Query: 297 GDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAAL 356
G E LFD M E V+ P+E + L
Sbjct: 315 GKGEFGIDLFDAMIEEGKVA------------------------------PNEATFLGVL 344
Query: 357 SECARLGALELGRRI------HLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC 410
+ C+ G +E G + K A H G A+VD+ ++ G I A F
Sbjct: 345 ACCSYTGQVERGEELFGLMMERFKLEARTEHYG-------AMVDLMSRSGRITEAFK-FL 396
Query: 411 KTSKDKKTTILYNSIISGLAHHGLGKYA 438
K ++ S++S HG K A
Sbjct: 397 KNMPVNANAAMWGSLLSACRSHGDVKLA 424
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 187/693 (26%), Positives = 314/693 (45%), Gaps = 87/693 (12%)
Query: 17 ALLASSCRTIQQ---ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVT 73
+L+ SSC ++ QI +V +GL L + +LIS + + ++ +F ++
Sbjct: 147 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN-VDYANYIFDQMS 205
Query: 74 NPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQ 133
D WN+I A++ + + T LL + G
Sbjct: 206 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 265
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGR 193
+H +VK F S V V N LL Y + A VF+QMP +D +S+N ++ FV GR
Sbjct: 266 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 325
Query: 194 AGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG------LVYREL---- 243
+ ++ +L M G + T + L+AC + + GR +HG L Y ++
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 244 -----GCLGD--------------NALLVNALVDMYAK---------------------- 262
G +G+ + + NAL+ YA+
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445
Query: 263 --------CGCL---ELAER--------VVSGVRNGKSVVAAWTSLVSAYASRGDVEVAR 303
CL +L ER V +G + + V SL++ YA GD+ ++
Sbjct: 446 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK---NSLITMYAKCGDLSSSQ 502
Query: 304 RLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG 363
LF+ + R++++W AM++ +H G+ + D+ LS A+L
Sbjct: 503 DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLA 562
Query: 364 ALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTI 420
LE G+++H +K E+ + A DMY+KCG I + + + ++
Sbjct: 563 VLEEGQQLHGLAVKLGFEH-----DSFIFNAAADMYSKCGEIGEVVKMLPPSVN--RSLP 615
Query: 421 LYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM 480
+N +IS L HG + F EM +G+ P VTFV+LL AC H GLVD+G ++ +
Sbjct: 616 SWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMI 675
Query: 481 STVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVEL 540
+ +G+ P +EH CV+DLLGR G L+EA I MP K N ++WR+LL++CK+HG+++
Sbjct: 676 ARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR 735
Query: 541 AKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNG 600
+ A + L +E + + YV+ SNM A + ++ +VRK + I+K S+V++
Sbjct: 736 GRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 795
Query: 601 ALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+ F GD++HP+ L DI +K G
Sbjct: 796 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 828
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/530 (22%), Positives = 215/530 (40%), Gaps = 47/530 (8%)
Query: 15 VKALLASSC----RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFS 70
V A L ++C ++ +Q+ + +GL D+++STA++ + + + S ++F
Sbjct: 43 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV-YGLVSCSRKVFE 101
Query: 71 LVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHL 130
+ + ++ W +++ +S + ++ SC + L
Sbjct: 102 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 161
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVR 190
G Q+ +VKS S + V N+L+ + A +F+QM RD +S+N + + +
Sbjct: 162 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 221
Query: 191 AGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNA 250
G S ++ MR F + T+ TLLS ++ Q+ GR +HGLV
Sbjct: 222 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV----------- 270
Query: 251 LLVNALVDMYAKCGCLELAERVVSGVRNG-KSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
V+ G SVV +L+ YA G A +F QM
Sbjct: 271 -------------------------VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 305
Query: 310 GERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGR 369
+D++SW ++++ + + G + V +AL+ C E GR
Sbjct: 306 PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR 365
Query: 370 RIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGL 429
+H Q G A+V MY K G + + V + ++ + +N++I G
Sbjct: 366 ILHGLVVVSGLFYNQIIG--NALVSMYGKIGEMSESRRVLLQMP--RRDVVAWNALIGGY 421
Query: 430 AHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQ 489
A A+ F+ MR+ G+ + +T V++L AC G + E KP + G
Sbjct: 422 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481
Query: 490 MEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVE 539
++ + + G LS + L + + N + W A+L+A HG E
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 530
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 156/377 (41%), Gaps = 76/377 (20%)
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQ-RV 231
MPVR+ VS+N M++G VR G M+ M GI+P + + +L++AC R
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 232 GRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSL 289
G QVHG V + G L D + A++ +Y G + + +V + RN V +WTSL
Sbjct: 61 GVQVHGFVAKS-GLLSD-VYVSTAILHLYGVYGLVSCSRKVFEEMPDRN----VVSWTSL 114
Query: 290 VSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE 349
+ Y+ +G+ E ++ M V +E
Sbjct: 115 MVGYSDKGEPEEVIDIYKGMRGEGV-------------------------------GCNE 143
Query: 350 VDVVAALSECARLGALELGRRI---------HLKYAAENWHCGQNGGFTCAVVDMYAKCG 400
+ +S C L LGR+I K A EN +++ M G
Sbjct: 144 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN-----------SLISMLGSMG 192
Query: 401 SIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVAL 460
++D A +F + S ++ TI +NSI + A +G + + +F MR + T L
Sbjct: 193 NVDYANYIFDQMS--ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTL 250
Query: 461 LCACGHSGLVDEGKKPFESMSTVYGVNPQM--EHYGCVVDLLGR----GGLLSEAYHLIL 514
L GH VD K ++G+ +M + CV + L R G EA +
Sbjct: 251 LSVLGH---VDHQKWG----RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 303
Query: 515 NMPFKANAVIWRALLSA 531
MP K + + W +L+++
Sbjct: 304 QMPTK-DLISWNSLMAS 319
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 187/693 (26%), Positives = 314/693 (45%), Gaps = 87/693 (12%)
Query: 17 ALLASSCRTIQQ---ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVT 73
+L+ SSC ++ QI +V +GL L + +LIS + + ++ +F ++
Sbjct: 164 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN-VDYANYIFDQMS 222
Query: 74 NPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQ 133
D WN+I A++ + + T LL + G
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 282
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGR 193
+H +VK F S V V N LL Y + A VF+QMP +D +S+N ++ FV GR
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 194 AGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVH------GLVYREL---- 243
+ ++ +L M G + T + L+AC + + GR +H GL Y ++
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402
Query: 244 -----GCLGD--------------NALLVNALVDMYAK---------------------- 262
G +G+ + + NAL+ YA+
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 462
Query: 263 --------CGCL---ELAER--------VVSGVRNGKSVVAAWTSLVSAYASRGDVEVAR 303
CL +L ER V +G + + V SL++ YA GD+ ++
Sbjct: 463 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK---NSLITMYAKCGDLSSSQ 519
Query: 304 RLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG 363
LF+ + R++++W AM++ +H G+ + D+ LS A+L
Sbjct: 520 DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLA 579
Query: 364 ALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTI 420
LE G+++H +K E+ + A DMY+KCG I + + + ++
Sbjct: 580 VLEEGQQLHGLAVKLGFEH-----DSFIFNAAADMYSKCGEIGEVVKMLPPSVN--RSLP 632
Query: 421 LYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM 480
+N +IS L HG + F EM +G+ P VTFV+LL AC H GLVD+G ++ +
Sbjct: 633 SWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMI 692
Query: 481 STVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVEL 540
+ +G+ P +EH CV+DLLGR G L+EA I MP K N ++WR+LL++CK+HG+++
Sbjct: 693 ARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR 752
Query: 541 AKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNG 600
+ A + L +E + + YV+ SNM A + ++ +VRK + I+K S+V++
Sbjct: 753 GRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 812
Query: 601 ALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+ F GD++HP+ L DI +K G
Sbjct: 813 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 845
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/530 (22%), Positives = 215/530 (40%), Gaps = 47/530 (8%)
Query: 15 VKALLASSC----RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFS 70
V A L ++C ++ +Q+ + +GL D+++STA++ + + + S ++F
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV-YGLVSCSRKVFE 118
Query: 71 LVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHL 130
+ + ++ W +++ +S + ++ SC + L
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVR 190
G Q+ +VKS S + V N+L+ + A +F+QM RD +S+N + + +
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 191 AGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNA 250
G S ++ MR F + T+ TLLS ++ Q+ GR +HGLV
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV----------- 287
Query: 251 LLVNALVDMYAKCGCLELAERVVSGVRNG-KSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
V+ G SVV +L+ YA G A +F QM
Sbjct: 288 -------------------------VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 322
Query: 310 GERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGR 369
+D++SW ++++ + + G + V +AL+ C E GR
Sbjct: 323 PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR 382
Query: 370 RIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGL 429
+H Q G A+V MY K G + + V + ++ + +N++I G
Sbjct: 383 ILHGLVVVSGLFYNQIIG--NALVSMYGKIGEMSESRRVLLQMP--RRDVVAWNALIGGY 438
Query: 430 AHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQ 489
A A+ F+ MR+ G+ + +T V++L AC G + E KP + G
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
Query: 490 MEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVE 539
++ + + G LS + L + + N + W A+L+A HG E
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 547
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 161/391 (41%), Gaps = 72/391 (18%)
Query: 157 YCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTL 216
Y F A +F+ MPVR+ VS+N M++G VR G M+ M GI+P + +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 217 VTLLSACSSLEDQ-RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSG 275
+L++AC R G QVHG V + G L D + A++ +Y G + + +V
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKS-GLLSD-VYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 276 VRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXX 335
+ + V +WTSL+ Y+ +G+ E ++ M V
Sbjct: 120 MPDRN--VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGV--------------------- 156
Query: 336 XXXXXXXXXMKPDEVDVVAALSECARLGALELGRRI---------HLKYAAENWHCGQNG 386
+E + +S C L LGR+I K A EN
Sbjct: 157 ----------GCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN------- 199
Query: 387 GFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR 446
+++ M G++D A +F + S ++ TI +NSI + A +G + + +F MR
Sbjct: 200 ----SLISMLGSMGNVDYANYIFDQMS--ERDTISWNSIAAAYAQNGHIEESFRIFSLMR 253
Query: 447 LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQM--EHYGCVVDLLGR-- 502
+ T LL GH VD K ++G+ +M + CV + L R
Sbjct: 254 RFHDEVNSTTVSTLLSVLGH---VDHQKWG----RGIHGLVVKMGFDSVVCVCNTLLRMY 306
Query: 503 --GGLLSEAYHLILNMPFKANAVIWRALLSA 531
G EA + MP K + + W +L+++
Sbjct: 307 AGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 9/249 (3%)
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
Y G V+ AR LFD M R+ VSW M+SG G +KP +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 353 VAALSECARLGAL-ELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK 411
+ ++ C R G++ G ++H A + + A++ +Y G + + VF
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLL--SDVYVSTAILHLYGVYGLVSCSRKVF-- 117
Query: 412 TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVD 471
+ + + S++ G + G + I +++ MR G+ + + ++ +CG L D
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL--LKD 175
Query: 472 EG-KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLS 530
E + G+ ++ ++ +LG G + A ++ M + + + W ++ +
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAA 234
Query: 531 ACKVHGDVE 539
A +G +E
Sbjct: 235 AYAQNGHIE 243
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/468 (32%), Positives = 229/468 (48%), Gaps = 39/468 (8%)
Query: 129 HLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGF 188
+LG Q+H + +KS + V ++L Y +YK+F+ +P +D + MI+GF
Sbjct: 467 NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526
Query: 189 VRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGD 248
G ++ + +M G PDE TL +L+ CSS G+++HG R +
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLR--AGIDK 584
Query: 249 NALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQ 308
L +ALV+MY+KCG L+L AR+++D+
Sbjct: 585 GMDLGSALVNMYSKCGSLKL---------------------------------ARQVYDR 611
Query: 309 MGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
+ E D VS +++ISGYS G D + + L A LG
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLG 671
Query: 369 RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISG 428
++H Y + C + +++ MY+K GSID F + + I + ++I+
Sbjct: 672 AQVH-AYITKIGLCTE-PSVGSSLLTMYSKFGSIDDCCKAFSQI--NGPDLIAWTALIAS 727
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNP 488
A HG A+ ++ M+ G PD VTFV +L AC H GLV+E SM YG+ P
Sbjct: 728 YAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEP 787
Query: 489 QMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQEL 548
+ HY C+VD LGR G L EA I NM K +A++W LL+ACK+HG+VEL K+A ++
Sbjct: 788 ENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKA 847
Query: 549 LAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYV 596
+ +E Y+ LSN+LA++ + DE RK + G+QK PGWS V
Sbjct: 848 IELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 214/509 (42%), Gaps = 52/509 (10%)
Query: 32 IQAHMVVTGL-HHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
+QAH++ L D+FL+ +L+S++ +N ++ + +LF + PD+ N +I +
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWY-SNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQH 128
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
++ ++ +C+ + P + CH +K + + V
Sbjct: 129 RLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM-RGFGI 209
+AL+ + +AYKVF + +N +I G +R G + +M GF
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ- 247
Query: 210 RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELA 269
+PD YT ++L+AC+SLE R G+ V R + C ++ + A+VD+YAKCG + A
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQA---RVIKCGAEDVFVCTAIVDLYAKCGHMAEA 304
Query: 270 ERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY 329
V S + N V +WT ++S Y D A +F +M H+G
Sbjct: 305 MEVFSRIPNPS--VVSWTVMLSGYTKSNDAFSALEIFKEM---------------RHSG- 346
Query: 330 XXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT 389
++ + V + +S C R + ++H ++ +
Sbjct: 347 ---------------VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYL--DSSVA 389
Query: 390 CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG 449
A++ MY+K G ID + VF ++ I+ N +I+ + AI LF M G
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEG 448
Query: 450 LVPDGVTFVALLCA--CGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLS 507
L D + +LL C + G K + G+ + + L + G L
Sbjct: 449 LRTDEFSVCSLLSVLDCLNLG------KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 508 EAYHLILNMPFKANAVIWRALLSACKVHG 536
E+Y L +PFK NA W +++S +G
Sbjct: 503 ESYKLFQGIPFKDNAC-WASMISGFNEYG 530
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 231/549 (42%), Gaps = 92/549 (16%)
Query: 32 IQAHMVVTGLHHDLFLSTALISFFAT-NHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
+QA ++ G D+F+ TA++ +A H A ++ +FS + NP + W ++ ++ S
Sbjct: 273 VQARVIKCG-AEDVFVCTAIVDLYAKCGHMA--EAMEVFSRIPNPSVVSWTVMLSGYTKS 329
Query: 91 PNHAFXXXXXXXXXX-XXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFV 149
N AF T ++ +C Q+H + KS F+ V
Sbjct: 330 -NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSV 388
Query: 150 ANALLHFYCVFRDAHNAYKVFEQMP-VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
A AL+ Y D + +VFE + ++ N+MI F ++ + G ++++ M G
Sbjct: 389 AAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEG 448
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
+R DE+++ +LLS L +G+QVHG + G + D + ++L +Y+KCG LE
Sbjct: 449 LRTDEFSVCSLLSVLDCL---NLGKQVHGYTLKS-GLVLD-LTVGSSLFTLYSKCGSLEE 503
Query: 269 AERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG 328
+ ++ G+ + A W S++S + G + A LF +M + G S
Sbjct: 504 SYKLFQGIPFKDN--ACWASMISGFNEYGYLREAIGLFSEM----------LDDGTS--- 548
Query: 329 YXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGF 388
PDE + A L+ C+ +L G+ IH G + G
Sbjct: 549 ------------------PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG- 589
Query: 389 TCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLL 448
A+V+MY+KCGS+ A V+ + + + +S+ISG + HGL + LF +M +
Sbjct: 590 -SALVNMYSKCGSLKLARQVYDRLPELDPVSC--SSLISGYSQHGLIQDGFLLFRDMVMS 646
Query: 449 GLVPDGVTFVALLCACGHS-----------------------------------GLVDEG 473
G D ++L A S G +D+
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA---YHLILNMPFKANAVIWRALLS 530
K F ++ P + + ++ + G +EA Y+L+ FK + V + +LS
Sbjct: 707 CKAFSQIN-----GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
Query: 531 ACKVHGDVE 539
AC G VE
Sbjct: 762 ACSHGGLVE 770
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/522 (22%), Positives = 219/522 (41%), Gaps = 48/522 (9%)
Query: 21 SSCRTIQQAL---QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDL 77
S+C +Q L + H + G + +ALI F+ N R + ++F + ++
Sbjct: 158 SACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR-FEDAYKVFRDSLSANV 216
Query: 78 FLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCH 137
+ WN II + N+ +T+ +L +CA+ G +
Sbjct: 217 YCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQAR 276
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCS 197
++K VFV A++ Y A +VF ++P VS+ +M++G+ ++ A +
Sbjct: 277 VIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSA 335
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALV 257
+++ +MR G+ + T+ +++SAC QVH V++ G D+++ AL+
Sbjct: 336 LEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS-GFYLDSSVAA-ALI 393
Query: 258 DMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSW 317
MY+K G ++L+E+V + D + +++V+
Sbjct: 394 SMYSKSGDIDLSEQVFEDL------------------------------DDIQRQNIVN- 422
Query: 318 TAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAA 377
MI+ +S + ++ DE V + LS L L LG+++H
Sbjct: 423 -VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS---VLDCLNLGKQVHGYTLK 478
Query: 378 ENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKY 437
G ++ +Y+KCGS++ + +F K + S+ISG +G +
Sbjct: 479 SGLVLDLTVG--SSLFTLYSKCGSLEESYKLF--QGIPFKDNACWASMISGFNEYGYLRE 534
Query: 438 AITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
AI LF EM G PD T A+L C + GK+ + G++ M+ +V
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE-IHGYTLRAGIDKGMDLGSALV 593
Query: 498 DLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVE 539
++ + G L A + +P + + V +L+S HG ++
Sbjct: 594 NMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHGLIQ 634
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 177/412 (42%), Gaps = 43/412 (10%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
Q+ + + +GL DL + ++L + + + +L S +LF + D W ++I +
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLY-SKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
T +L C++ + G ++H + +++ + +
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
+AL++ Y A +V++++P D VS + +I+G+ + G + DM G
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 211 PDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAE 270
D + + ++L A + ++ +G QVH + + C + + ++L+ MY+K G ++
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPS--VGSSLLTMYSKFGSIDDCC 707
Query: 271 RVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYX 330
+ S + NG ++ AWT+L+++YA G A ++++ M E+
Sbjct: 708 KAFSQI-NGPDLI-AWTALIASYAQHGKANEALQVYNLMKEKG----------------- 748
Query: 331 XXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHC-GQNGGFT 389
KPD+V V LS C+ G +E HL +++ +N +
Sbjct: 749 --------------FKPDKVTFVGVLSACSHGGLVE-ESYFHLNSMVKDYGIEPENRHYV 793
Query: 390 CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG---LGKYA 438
C +VD + G + A + F K +++ ++++ HG LGK A
Sbjct: 794 C-MVDALGRSGRLREA-ESFINNMHIKPDALVWGTLLAACKIHGEVELGKVA 843
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/509 (30%), Positives = 247/509 (48%), Gaps = 51/509 (10%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
T+ L+ C + + L++H H++ + F+A L+ Y A KVF++
Sbjct: 79 TYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLE----DQ 229
R +N + AG + + M G+ D +T +L AC + E
Sbjct: 139 RKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHL 198
Query: 230 RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSL 289
G+++H + R R S V T+L
Sbjct: 199 MKGKEIHAHLTR-----------------------------------RGYSSHVYIMTTL 223
Query: 290 VSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG--YXXXXXXXXXXXXXXXMKP 347
V YA G V+ A +F M R+VVSW+AMI+ Y+ G + P
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 348 DEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDT 404
+ V +V+ L CA L ALE G+ IH L+ ++ A+V MY +CG ++
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSIL-----PVISALVTMYGRCGKLEV 338
Query: 405 ALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCAC 464
VF + + + +NS+IS HG GK AI +FEEM G P VTFV++L AC
Sbjct: 339 GQRVFDRM--HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 465 GHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVI 524
H GLV+EGK+ FE+M +G+ PQ+EHY C+VDLLGR L EA ++ +M + +
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 525 WRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDN 584
W +LL +C++HG+VELA+ A + L A+E + YV+L+++ A+ DE V+K +++
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516
Query: 585 VGIQKPPGWSYVEMNGALHKFLAGDKSHP 613
G+QK PG ++E+ ++ F++ D+ +P
Sbjct: 517 RGLQKLPGRCWMEVRRKMYSFVSVDEFNP 545
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 220/488 (45%), Gaps = 64/488 (13%)
Query: 5 LASSSASYDRVKALLASSC---RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRA 61
L+ S+ + LL C ++ AL++ H++ G D FL+T LI + ++ +
Sbjct: 69 LSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMY-SDLGS 127
Query: 62 LRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKS 121
+ ++ ++F +++WNA+ +A +L+ + FT+ Y+LK+
Sbjct: 128 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 187
Query: 122 C--ANARTPHL--GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD 177
C + HL G ++H HL + + SHV++ L+ Y F A VF MPVR+
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDM--RGFGIRPDEYTLVTLLSACSSLEDQRVGRQV 235
VS++ MI + + G+A +++ +M P+ T+V++L AC+SL G+ +
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 236 HGLVYRELGCLGDNALL--VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
HG + R G +++L ++ALV MY +CG LE+ +RV R V +W SL+S+Y
Sbjct: 308 HGYILRR----GLDSILPVISALVTMYGRCGKLEVGQRVFD--RMHDRDVVSWNSLISSY 361
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
G + A ++F++M + +G S P V V
Sbjct: 362 GVHGYGKKAIQIFEEM----------LANGAS---------------------PTPVTFV 390
Query: 354 AALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTS 413
+ L C+ G +E G+R+ ++ Q + C +VD+ + +D A K
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC-MVDLLGRANRLDEA----AKMV 445
Query: 414 KDKKTTI---LYNSIISGLAHHGLGKYAITLFEE--MRLLGLVPDGV-TFVALLCACGHS 467
+D +T ++ S++ HG + L E RL L P +V L +
Sbjct: 446 QDMRTEPGPKVWGSLLGSCRIHG----NVELAERASRRLFALEPKNAGNYVLLADIYAEA 501
Query: 468 GLVDEGKK 475
+ DE K+
Sbjct: 502 QMWDEVKR 509
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 243/510 (47%), Gaps = 39/510 (7%)
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
VA L+ + + + +F R+ N +I G R S++ M G
Sbjct: 62 VAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLG 121
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
++PD T +L + S L + +GR +H + + ++ + +LVDMYAK G L+
Sbjct: 122 VKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNF--VDCDSFVRLSLVDMYAKTGQLKH 179
Query: 269 AERV-------------------VSGVRNGKSV--------------VAAWTSLVSAYAS 295
A +V ++G K + +W++L+ Y
Sbjct: 180 AFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVD 239
Query: 296 RGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAA 355
G++ A++LF+ M E++VVSWT +I+G+S G +KP+E + A
Sbjct: 240 SGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAV 299
Query: 356 LSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD 415
LS C++ GAL G RIH Y +N + A+VDMYAKCG +D A VF ++ +
Sbjct: 300 LSACSKSGALGSGIRIH-GYILDN-GIKLDRAIGTALVDMYAKCGELDCAATVF--SNMN 355
Query: 416 KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKK 475
K + + ++I G A HG AI F +M G PD V F+A+L AC +S VD G
Sbjct: 356 HKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLN 415
Query: 476 PFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVH 535
F+SM Y + P ++HY VVDLLGR G L+EA+ L+ NMP + W AL ACK H
Sbjct: 416 FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 475
Query: 536 GDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSY 595
A+ Q LL ++ + Y+ L A + R ++ ++ GWSY
Sbjct: 476 KGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSY 535
Query: 596 VEMNGALHKFLAGDKSHPEAKATELMLRDI 625
+E++G L+KF AGD SH + L L +I
Sbjct: 536 IELDGQLNKFSAGDYSHKLTQEIGLKLDEI 565
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 166/430 (38%), Gaps = 79/430 (18%)
Query: 14 RVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHR---ALRHSLRLFS 70
RV A L S C ++ ++ + + F+ ALI N R ++RH + +
Sbjct: 61 RVAAQLVS-CSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLR 119
Query: 71 LVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHL 130
L PD + ++K++S F L+ A
Sbjct: 120 LGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKH 179
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAH-------------------------- 164
Q+ + + N L++ YC +D H
Sbjct: 180 AFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVD 239
Query: 165 -----NAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTL 219
A ++FE MP ++ VS+ +INGF + G ++ +M G++P+EYT+ +
Sbjct: 240 SGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAV 299
Query: 220 LSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNG 279
LSACS G ++HG + + G D A + ALVDMYAKCG L+ A V S + N
Sbjct: 300 LSACSKSGALGSGIRIHGYIL-DNGIKLDRA-IGTALVDMYAKCGELDCAATVFSNM-NH 356
Query: 280 KSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXX 339
K ++ +WT+++ +A G A + F QM M SG
Sbjct: 357 KDIL-SWTAMIQGWAVHGRFHQAIQCFRQM----------MYSG---------------- 389
Query: 340 XXXXXMKPDEVDVVAALSECARLGALELG----RRIHLKYAAENWHCGQNGGFTCAVVDM 395
KPDEV +A L+ C ++LG + L YA E VVD+
Sbjct: 390 -----EKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIE-----PTLKHYVLVVDL 439
Query: 396 YAKCGSIDTA 405
+ G ++ A
Sbjct: 440 LGRAGKLNEA 449
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 157/490 (32%), Positives = 250/490 (51%), Gaps = 50/490 (10%)
Query: 150 ANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGI 209
+N L++ Y D NA KVF++MP R ++N MI G ++ + + +M G G
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 210 RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNA-LVDMYAKCGCLEL 268
PDEYTL ++ S + L +G+Q+HG + G D L+VN+ L MY + G L+
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK-YGLELD--LVVNSSLAHMYMRNGKLQD 144
Query: 269 AERVVSG--VRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSH 326
E V+ VRN + AW +L+ A G E L+ M ISG
Sbjct: 145 GEIVIRSMPVRN----LVAWNTLIMGNAQNGCPETVLYLYKMMK----------ISG--- 187
Query: 327 AGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNG 386
+P+++ V LS C+ L G++IH AE G +
Sbjct: 188 ------------------CRPNKITFVTVLSSCSDLAIRGQGQQIH----AEAIKIGASS 225
Query: 387 GFTCA--VVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEE 444
++ MY+KCG + A F + ++ + ++++S+IS HG G AI LF
Sbjct: 226 VVAVVSSLISMYSKCGCLGDAAKAF--SEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 283
Query: 445 M-RLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRG 503
M + + V F+ LL AC HSGL D+G + F+ M YG P ++HY CVVDLLGR
Sbjct: 284 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 343
Query: 504 GLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLS 563
G L +A +I +MP K + VIW+ LLSAC +H + E+A+ +E+L ++ + A YV+L+
Sbjct: 344 GCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLA 403
Query: 564 NMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLR 623
N+ A + + + VRK++ + ++K G S+ E G +H+F GD+S ++K L+
Sbjct: 404 NVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLK 463
Query: 624 DINMGVKSIG 633
++ + +K G
Sbjct: 464 ELTLEMKLKG 473
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 128/295 (43%), Gaps = 4/295 (1%)
Query: 20 ASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFL 79
++ R++ QI + + GL DL ++++L + N + + + S+ +L
Sbjct: 101 SAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR-NLVA 159
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
WN +I ++ + TF +L SC++ G Q+H +
Sbjct: 160 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 219
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMK 199
K S V V ++L+ Y +A K F + D V ++ MI+ + G+ +++
Sbjct: 220 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 279
Query: 200 VLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
+ M + +E + LL ACS + G ++ ++ + G +VD
Sbjct: 280 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG-FKPGLKHYTCVVD 338
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD 313
+ + GCL+ AE ++ + K+ + W +L+SA + E+A+R+F ++ + D
Sbjct: 339 LLGRAGCLDQAEAIIRSMPI-KTDIVIWKTLLSACNIHKNAEMAQRVFKEILQID 392
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/522 (30%), Positives = 253/522 (48%), Gaps = 64/522 (12%)
Query: 133 QLHCHLVKSRFHSH---VFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFV 189
QLH +++ + +F+ +L F D + A++VF+ + + M N +
Sbjct: 66 QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHS----SFMWNTLI 121
Query: 190 RAGRAGCSMKVLGDM-------RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRE 242
RA S K M RG PD++T +L AC+ + G+QVH + +
Sbjct: 122 RACAHDVSRKEEAFMLYRKMLERGES-SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKH 180
Query: 243 LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVA 302
G + + N L+ +Y CGCL+LA
Sbjct: 181 --GFGGDVYVNNGLIHLYGSCGCLDLA--------------------------------- 205
Query: 303 RRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARL 362
R++FD+M ER +VSW +MI G +PD + + LS CA L
Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVRFG-EYDSALQLFREMQRSFEPDGYTMQSVLSACAGL 264
Query: 363 GALELGRRIHLKYAAE-NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL 421
G+L LG H + + + ++++MY KCGS+ A VF K+
Sbjct: 265 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVF--QGMQKRDLAS 322
Query: 422 YNSIISGLAHHGLGKYAITLFEEM--RLLGLVPDGVTFVALLCACGHSGLVDEGKKPFES 479
+N++I G A HG + A+ F+ M + + P+ VTFV LL AC H G V++G++ F+
Sbjct: 323 WNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDM 382
Query: 480 MSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA-CKVHGDV 538
M Y + P +EHYGC+VDL+ R G ++EA ++++MP K +AVIWR+LL A CK V
Sbjct: 383 MVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASV 442
Query: 539 ELAKLACQELLAVEHDHGAR-------YVMLSNMLADMDQHDEAASVRKAIDNVGIQKPP 591
EL++ + ++ + D+ + YV+LS + A + ++ VRK + GI+K P
Sbjct: 443 ELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEP 502
Query: 592 GWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
G S +E+NG H+F AGD SHP+ K L+ I+ ++SIG
Sbjct: 503 GCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIG 544
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 208/456 (45%), Gaps = 60/456 (13%)
Query: 4 PLASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHD---LFLSTALISFFATNHR 60
P AS++ ++ + LA +C + Q Q+ A + T + LFL ++ +++
Sbjct: 39 PSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQL-SSSFS 97
Query: 61 ALRHSLRLFSLVTNPDLFLWNAIIKA--HSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYL 118
+ ++ R+F + N F+WN +I+A H +S TFP++
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
LK+CA G Q+HC +VK F V+V N L+H Y A KVF++MP R
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
VS+N MI+ VR G ++++ +M+ PD YT+ ++LSAC+ L +G H
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 239 VYRELGC-LGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
+ R+ + + L+ N+L++MY KCG L +AE+V G++ K +A+W +++ +A+ G
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ--KRDLASWNAMILGFATHG 334
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS 357
E A FD+M ++ ++P+ V V L
Sbjct: 335 RAEEAMNFFDRMVDK-----------------------------RENVRPNSVTFVGLLI 365
Query: 358 ECARLGALELGRRIH--------LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
C G + GR+ ++ A E++ C +VD+ A+ G I A+D+
Sbjct: 366 ACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGC---------IVDLIARAGYITEAIDMV 416
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM 445
K +++ S++ G ++ L EE+
Sbjct: 417 MSMPM-KPDAVIWRSLLDACCKKGA---SVELSEEI 448
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 230/471 (48%), Gaps = 49/471 (10%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG 192
Q+H ++ H + + LLH ++ A + Q+P YN +I+ V
Sbjct: 27 QIHAQIITIGLSHHTYPLSKLLHLSSTVCLSY-ALSILRQIPNPSVFLYNTLISSIVSNH 85
Query: 193 RAGCSM-------KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQ--RVGRQVHGLVYREL 243
+ + ++L F +RP+E+T +L A S + Q R GR +H V + L
Sbjct: 86 NSTQTHLAFSLYDQILSSRSNF-VRPNEFTYPSLFKA-SGFDAQWHRHGRALHAHVLKFL 143
Query: 244 GCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVAR 303
+ + + ALV YA CG L AR
Sbjct: 144 EPVNHDRFVQAALVGFYANCGKLR---------------------------------EAR 170
Query: 304 RLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG 363
LF+++ E D+ +W +++ Y+++ ++P+E+ +VA + CA LG
Sbjct: 171 SLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLG 230
Query: 364 ALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYN 423
G H+ N Q G +++D+Y+KCG + A VF + S+ + YN
Sbjct: 231 EFVRGVWAHVYVLKNNLTLNQFVG--TSLIDLYSKCGCLSFARKVFDEMSQ--RDVSCYN 286
Query: 424 SIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTV 483
++I GLA HG G+ I L++ + GLVPD TFV + AC HSGLVDEG + F SM V
Sbjct: 287 AMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAV 346
Query: 484 YGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKL 543
YG+ P++EHYGC+VDLLGR G L EA I MP K NA +WR+ L + + HGD E ++
Sbjct: 347 YGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEI 406
Query: 544 ACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWS 594
A + LL +E ++ YV+LSN+ A +++ + R+ + + + K PG S
Sbjct: 407 ALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 181/438 (41%), Gaps = 48/438 (10%)
Query: 5 LASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRH 64
+ S S S + L S C+++Q QI A ++ GL H + + L+ +T L +
Sbjct: 1 MTSPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSST--VCLSY 58
Query: 65 SLRLFSLVTNPDLFLWNAIIKA----HSLSPNH-AFXXX-XXXXXXXXXXXXXXFTFPYL 118
+L + + NP +FL+N +I + H+ + H AF FT+P L
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 119 LKSCA-NARTPHLGLQLHCHLVK--SRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPV 175
K+ +A+ G LH H++K + FV AL+ FY A +FE++
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 176 RDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQV 235
D ++N ++ + + +VL +RP+E +LV L+ +C++L + G
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWA 238
Query: 236 HGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYAS 295
H VY L N + +L+D+Y+KCGCL
Sbjct: 239 H--VYVLKNNLTLNQFVGTSLIDLYSKCGCLSF--------------------------- 269
Query: 296 RGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAA 355
AR++FD+M +RDV + AMI G + G+ + PD V
Sbjct: 270 ------ARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVT 323
Query: 356 LSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD 415
+S C+ G ++ G +I A + + C +VD+ + G ++ A + K
Sbjct: 324 ISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGC-LVDLLGRSGRLEEAEECI-KKMPV 381
Query: 416 KKTTILYNSIISGLAHHG 433
K L+ S + HG
Sbjct: 382 KPNATLWRSFLGSSQTHG 399
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 120/282 (42%), Gaps = 21/282 (7%)
Query: 28 QALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH 87
+AL + ++HD F+ AL+ F+A N LR + LF + PDL WN ++ A+
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYA-NCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 88 SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
+ S + L+KSCAN G+ H +++K+ +
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ 251
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
FV +L+ Y A KVF++M RD YN MI G G +++ +
Sbjct: 252 FVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQ 311
Query: 208 GIRPDEYTLVTLLSAC--SSLEDQRVG-----RQVHGLVYR--ELGCLGDNALLVNALVD 258
G+ PD T V +SAC S L D+ + + V+G+ + GC LVD
Sbjct: 312 GLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGC----------LVD 361
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVE 300
+ + G LE AE + + K W S + + + GD E
Sbjct: 362 LLGRSGRLEEAEECIKKMP-VKPNATLWRSFLGSSQTHGDFE 402
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 235/471 (49%), Gaps = 45/471 (9%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM---RGF 207
A LH + + H A +F+ + + + Y+ MI R+ + ++ M
Sbjct: 51 TAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEE 110
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
I P T L+ AC VG+Q+H V + N + L D + + G L
Sbjct: 111 DIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVK-------NGVF---LSDSHVQTGVLR 160
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
+ Y + AR++FD++ + DVV W +++GY
Sbjct: 161 I------------------------YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRC 196
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG 387
G ++PDE V AL+ CA++GAL G+ IH ++W +
Sbjct: 197 GLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSW-IESDVF 255
Query: 388 FTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM-R 446
A+VDMYAKCG I+TA++VF K ++ + + ++I G A +G K A+T E + R
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFKKLTR--RNVFSWAALIGGYAAYGYAKKAMTCLERLER 313
Query: 447 LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLL 506
G+ PD V + +L AC H G ++EG+ E+M Y + P+ EHY C+VDL+ R G L
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRL 373
Query: 507 SEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVE----HDHGARYVML 562
+A +LI MP K A +W ALL+ C+ H +VEL +LA + LL +E + A V L
Sbjct: 374 DDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQL 433
Query: 563 SNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHP 613
SN+ + ++ EA+ VR I+ G++K PGWS +E++G + KF++GD SHP
Sbjct: 434 SNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHP 484
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 208/444 (46%), Gaps = 49/444 (11%)
Query: 9 SASYDRVKALLASS--CRTIQQALQIQAHMVVTGLHHDLFLSTALISFF---ATNHRALR 63
S+ + K+L+ +S C T++Q + ++ GLH + + + L++ F ++
Sbjct: 5 SSFHQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFH 64
Query: 64 HSLRLFSLVTNPDLFLWNAIIK--AHSLSPNHAFXXXXXXXXXXXXXXXXXF-TFPYLLK 120
++ +F + P+ F+++ +I+ + S P+ + TF +L+
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIV 124
Query: 121 SCANARTPHLGLQLHCHLVKS-RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCV 179
+C A +G Q+HC +VK+ F S V +L Y + +A KVF+++P D V
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVV 184
Query: 180 SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLV 239
+++++NG+VR G ++V +M G+ PDE+++ T L+AC+ + G+ +H V
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 240 YRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDV 299
++ + + + ALVDMYAKCGC+E A V
Sbjct: 245 KKK-SWIESDVFVGTALVDMYAKCGCIETA-----------------------------V 274
Query: 300 EVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXX-XXXXXXXXXMKPDEVDVVAALSE 358
EV F ++ R+V SW A+I GY+ GY +KPD V ++ L+
Sbjct: 275 EV----FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAA 330
Query: 359 CARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT 418
CA G LE GR + A ++ ++C +VD+ + G +D AL++ K K
Sbjct: 331 CAHGGFLEEGRSMLENMEARYEITPKHEHYSC-IVDLMCRAGRLDDALNLIEKMPM-KPL 388
Query: 419 TILYNSIISGLAHHG---LGKYAI 439
++ ++++G H LG+ A+
Sbjct: 389 ASVWGALLNGCRTHKNVELGELAV 412
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 232/471 (49%), Gaps = 45/471 (9%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM---RGF 207
A LH + + H A +F+ + + + Y+ MI R+ + ++ M
Sbjct: 51 TAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEE 110
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
I P T L+ AC VG+Q+H V + N + L D + + G L
Sbjct: 111 DITPSYLTFHFLIVACLKACFFSVGKQIHCWVVK-------NGVF---LSDGHVQTGVLR 160
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
+ Y + AR++FD++ + DVV W +++GY
Sbjct: 161 I------------------------YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRC 196
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG 387
G ++PDE V AL+ CA++GAL G+ IH + W +
Sbjct: 197 GLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRW-IESDVF 255
Query: 388 FTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM-R 446
A+VDMYAKCG I+TA++VF K ++ + + ++I G A +G K A T + + R
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTR--RNVFSWAALIGGYAAYGYAKKATTCLDRIER 313
Query: 447 LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLL 506
G+ PD V + +L AC H G ++EG+ E+M YG+ P+ EHY C+VDL+ R G L
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRL 373
Query: 507 SEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVE----HDHGARYVML 562
+A LI MP K A +W ALL+ C+ H +VEL +LA Q LL +E + A V L
Sbjct: 374 DDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQL 433
Query: 563 SNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHP 613
SN+ + ++ EA VR I+ GI+K PGWS +E++G + KF++GD SHP
Sbjct: 434 SNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHP 484
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 208/444 (46%), Gaps = 49/444 (11%)
Query: 9 SASYDRVKALLASS--CRTIQQALQIQAHMVVTGLHHDLFLSTALISFF---ATNHRALR 63
S+ + K+L+ +S C T++Q + ++ GLH + + + L++ F ++
Sbjct: 5 SSFHQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFH 64
Query: 64 HSLRLFSLVTNPDLFLWNAIIK--AHSLSPNHAFXXXXXXXXXXXXXXXXXF-TFPYLLK 120
++ +F + P+ F+++ +I+ + S P+ + TF +L+
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 121 SCANARTPHLGLQLHCHLVKS-RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCV 179
+C A +G Q+HC +VK+ F S V +L Y + +A KVF+++P D V
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 180 SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLV 239
+++++NG+VR G ++V +M GI PDE+++ T L+AC+ + G+ +H V
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 240 YRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDV 299
++ D + ALVDMYAKCGC+E A V
Sbjct: 245 KKKRWIESD-VFVGTALVDMYAKCGCIETA-----------------------------V 274
Query: 300 EVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXX-XXXXXXXXXMKPDEVDVVAALSE 358
EV F+++ R+V SW A+I GY+ GY +KPD V ++ L+
Sbjct: 275 EV----FEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
Query: 359 CARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT 418
CA G LE GR + A ++ ++C +VD+ + G +D ALD+ K K
Sbjct: 331 CAHGGFLEEGRTMLENMEARYGITPKHEHYSC-IVDLMCRAGRLDDALDLIEKMPM-KPL 388
Query: 419 TILYNSIISGLAHHG---LGKYAI 439
++ ++++G H LG+ A+
Sbjct: 389 ASVWGALLNGCRTHKNVELGELAV 412
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 251/507 (49%), Gaps = 46/507 (9%)
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGR 193
LH +K F S F N L+ Y ++ + A K+F++M + VS+ +I+G+ G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 194 AGCSMKVLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALL 252
++ + M + P+EYT ++ ACS+L + R+G+ +H + E+ L N ++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARL--EISGLRRNIVV 168
Query: 253 VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM--G 310
++LVDMY KC DVE ARR+FD M
Sbjct: 169 SSSLVDMYGKCN---------------------------------DVETARRVFDSMIGY 195
Query: 311 ERDVVSWTAMISGYSH--AGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
R+VVSWT+MI+ Y+ G+ + ++ + + +S C+ LG L+ G
Sbjct: 196 GRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWG 255
Query: 369 RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISG 428
+ H + N +++DMYAKCGS+ A +F + + I Y S+I
Sbjct: 256 KVAHGLVTRGGYE--SNTVVATSLLDMYAKCGSLSCAEKIFLRIRC--HSVISYTSMIMA 311
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNP 488
A HGLG+ A+ LF+EM + P+ VT + +L AC HSGLV+EG + M+ YGV P
Sbjct: 312 KAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVP 371
Query: 489 QMEHYGCVVDLLGRGGLLSEAYHLILNMPFKAN--AVIWRALLSACKVHGDVELAKLACQ 546
HY CVVD+LGR G + EAY L + A A++W ALLSA ++HG VE+ A +
Sbjct: 372 DSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASK 431
Query: 547 ELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFL 606
L+ + Y+ LSN A +++ S+R + G K S++E +++ F
Sbjct: 432 RLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFH 491
Query: 607 AGDKSHPEAKATELMLRDINMGVKSIG 633
AGD S E+ E L+D+ +K G
Sbjct: 492 AGDLSCDESGEIERFLKDLEKRMKERG 518
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 181/415 (43%), Gaps = 61/415 (14%)
Query: 39 TGLHHDLFLSTALIS-FFATNH--------RALRHSLRLFSLVTNPDLFLWNAIIKAHSL 89
T L H L L S F NH + + + +LF + P++ W ++I ++
Sbjct: 48 TNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYND 107
Query: 90 --SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
P +A +TF + K+C+ +G +H L S ++
Sbjct: 108 MGKPQNALSMFQKMHEDRPVPPNE-YTFASVFKACSALAESRIGKNIHARLEISGLRRNI 166
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMP--VRDCVSYNMMINGFVRAGRAGCSMKVLGDMR 205
V+++L+ Y D A +VF+ M R+ VS+ MI + + R ++++ R
Sbjct: 167 VVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF---R 223
Query: 206 GFGI-----RPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMY 260
F R +++ L +++SACSSL + G+ HGLV R G N ++ +L+DMY
Sbjct: 224 SFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTR--GGYESNTVVATSLLDMY 281
Query: 261 AKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAM 320
AKCG L AE++ +R V ++TS++ A A G E A +LFD+ M
Sbjct: 282 AKCGSLSCAEKIFLRIRCHS--VISYTSMIMAKAKHGLGEAAVKLFDE-----------M 328
Query: 321 ISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENW 380
++G + P+ V ++ L C+ G + G +L AE +
Sbjct: 329 VAG--------------------RINPNYVTLLGVLHACSHSGLVNEGLE-YLSLMAEKY 367
Query: 381 HCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSK--DKKTTILYNSIISGLAHHG 433
+ VVDM + G +D A ++ KT + ++ +L+ +++S HG
Sbjct: 368 GVVPDSRHYTCVVDMLGRFGRVDEAYEL-AKTIEVGAEQGALLWGALLSAGRLHG 421
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 132/309 (42%), Gaps = 16/309 (5%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTN--PDLFLWNAIIKAHS 88
I A + ++GL ++ +S++L+ + + + + R+F + ++ W ++I A++
Sbjct: 152 NIHARLEISGLRRNIVVSSSLVDMYGKCN-DVETARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 89 LSP--NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSH 146
+ + A F ++ +C++ G H + + + S+
Sbjct: 211 QNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESN 270
Query: 147 VFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
VA +LL Y A K+F ++ +SY MI + G ++K+ +M
Sbjct: 271 TVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVA 330
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCG-- 264
I P+ TL+ +L ACS G + L+ + G + D+ +VDM + G
Sbjct: 331 GRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYT-CVVDMLGRFGRV 389
Query: 265 --CLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEV---ARRLFDQMGERDVVSWTA 319
ELA+ + G G + W +L+SA G VE+ A + Q ++ ++ A
Sbjct: 390 DEAYELAKTIEVGAEQGALL---WGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIA 446
Query: 320 MISGYSHAG 328
+ + Y+ +G
Sbjct: 447 LSNAYAVSG 455
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 248/496 (50%), Gaps = 60/496 (12%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
TF ++ SC+ A H Q+H +K+ + + V+NA + Y F D A+KVFE
Sbjct: 292 LTFVSVMGSCSCAAMGH---QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
+ +D V++N MI+ + +A +M V M G++PDE+T +LL+ L
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL------ 402
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
D +V A + + +E++ +L+SA
Sbjct: 403 ---------------DVLEMVQACIIKFGLSSKIEIS-----------------NALISA 430
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK--PDEV 350
Y+ G +E A LF++ ++++SW A+ISG+ H G+ ++ PD
Sbjct: 431 YSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAY 490
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT-----CAVVDMYAKCGSIDTA 405
+ LS C +L LG + H + ++G F A+++MY++CG+I +
Sbjct: 491 TLSTLLSICVSTSSLMLGSQTHA-------YVLRHGQFKETLIGNALINMYSQCGTIQNS 543
Query: 406 LDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG-LVPDGVTFVALLCAC 464
L+VF + S+ K + +NS+IS + HG G+ A+ ++ M+ G ++PD TF A+L AC
Sbjct: 544 LEVFNQMSE--KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
Query: 465 GHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHL--ILNMPFKANA 522
H+GLV+EG + F SM +GV ++H+ C+VDLLGR G L EA L I +
Sbjct: 602 SHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRV 661
Query: 523 VIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAI 582
+W AL SAC HGD++L K+ + L+ E D + YV LSN+ A EA R+AI
Sbjct: 662 DVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAI 721
Query: 583 DNVGIQKPPGWSYVEM 598
+ +G K G S++ +
Sbjct: 722 NMIGAMKQRGCSWMRL 737
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 161/361 (44%), Gaps = 27/361 (7%)
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
++ N + G R+G ++K+ D+ R +RPD+Y++ ++ L D G QVH
Sbjct: 22 LNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHC 81
Query: 238 LVYRE-LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASR 296
R L C ++ + N L+ +Y + G L ++ + V +WT+L+SA
Sbjct: 82 YAIRSGLLC---HSHVSNTLLSLYERLGNLASLKKKFDEIDEPD--VYSWTTLLSASFKL 136
Query: 297 GDVEVARRLFDQMGERDVVS-WTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAA 355
GD+E A +FD+M ERD V+ W AMI+G +GY ++ D+
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 356 LSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD 415
LS C G+L+ G+++H + + A++ MY C + A VF +T
Sbjct: 197 LSMC-DYGSLDFGKQVHSLVIKAGFFIASS--VVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 416 KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL--CACGHSGLVDEG 473
+ + +N +I GLA + ++ +F +M L P +TFV+++ C+C G G
Sbjct: 254 VRDQVTFNVVIDGLAGFKRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHG 312
Query: 474 ---KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLS 530
K +E + V N M Y D A H + + + V W ++S
Sbjct: 313 LAIKTGYEKYTLV--SNATMTMYSSFEDF--------GAAHKVFESLEEKDLVTWNTMIS 362
Query: 531 A 531
+
Sbjct: 363 S 363
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 186/448 (41%), Gaps = 101/448 (22%)
Query: 126 RTPHLGLQLHCHLVKSRFHSHVFVANALLHFY---------------------------- 157
R G Q+HC+ ++S H V+N LL Y
Sbjct: 71 RDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLL 130
Query: 158 -CVFR--DAHNAYKVFEQMPVRDCVS-YNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDE 213
F+ D A++VF++MP RD V+ +N MI G +G S+++ +M G+R D+
Sbjct: 131 SASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDK 190
Query: 214 YTLVTLLSACS--SLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKC-----GCL 266
+ T+LS C SL+ G+QVH LV + + + +VNAL+ MY C CL
Sbjct: 191 FGFATILSMCDYGSLD---FGKQVHSLVIKAGFFIASS--VVNALITMYFNCQVVVDACL 245
Query: 267 ELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSH 326
E DV V RD V++ +I G
Sbjct: 246 VFEET--------------------------DVAV----------RDQVTFNVVIDGL-- 267
Query: 327 AGYXX-XXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHC 382
AG+ ++P ++ V+ + C+ +G ++H +K E +
Sbjct: 268 AGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTL 324
Query: 383 GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLF 442
N A + MY+ A VF S ++K + +N++IS LGK A++++
Sbjct: 325 VSN-----ATMTMYSSFEDFGAAHKVF--ESLEEKDLVTWNTMISSYNQAKLGKSAMSVY 377
Query: 443 EEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGR 502
+ M ++G+ PD TF +LL + L + + ++ +G++ ++E ++ +
Sbjct: 378 KRMHIIGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSK 433
Query: 503 GGLLSEAYHLILNMPFKANAVIWRALLS 530
G + +A L+ + N + W A++S
Sbjct: 434 NGQIEKA-DLLFERSLRKNLISWNAIIS 460
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 6/286 (2%)
Query: 32 IQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKA--HSL 89
+QA ++ GL + +S ALIS ++ N + + L LF +L WNAII H+
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIEKADL-LFERSLRKNLISWNAIISGFYHNG 466
Query: 90 SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFV 149
P +T LL C + + LG Q H ++++ +
Sbjct: 467 FPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLI 526
Query: 150 ANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG- 208
NAL++ Y N+ +VF QM +D VS+N +I+ + R G ++ M+ G
Sbjct: 527 GNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGK 586
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
+ PD T +LSACS G ++ + G + N + LVD+ + G L+
Sbjct: 587 VIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVI-RNVDHFSCLVDLLGRAGHLDE 645
Query: 269 AERVVS-GVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD 313
AE +V + S V W +L SA A+ GD+++ + + + E++
Sbjct: 646 AESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKE 691
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 273/581 (46%), Gaps = 40/581 (6%)
Query: 20 ASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFL 79
A ++++ L + ++ + D ++ AL++ + N + + +F ++ N D+
Sbjct: 127 AGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMY-MNFGKVEMARDVFDVMKNRDVIS 185
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
WN +I + + T +L C + + +G +H +
Sbjct: 186 WNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE 245
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMK 199
+ R + V NAL++ Y A VF++M RD +++ MING+ G +++
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE 305
Query: 200 VLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDM 259
+ M+ G+RP+ T+ +L+S C G+ +HG R+ + + ++ +L+ M
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ--VYSDIIIETSLISM 363
Query: 260 YAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTA 319
YAKC ++L RV SG K W+++++ V A LF +M DV
Sbjct: 364 YAKCKRVDLCFRVFSGA--SKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV----- 416
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
+P+ + + L A L L IH
Sbjct: 417 --------------------------EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTG 450
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVF--CKTSKDKKTTILYNSIISGLAHHGLGKY 437
+ + +V +Y+KCG++++A +F + K +L+ ++ISG HG G
Sbjct: 451 FMSSLDAA--TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
Query: 438 AITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
A+ +F EM G+ P+ +TF + L AC HSGLV+EG F M Y + HY C+V
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIV 568
Query: 498 DLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGA 557
DLLGR G L EAY+LI +PF+ + +W ALL+AC H +V+L ++A +L +E ++
Sbjct: 569 DLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTG 628
Query: 558 RYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEM 598
YV+L+N+ A + + + VR ++NVG++K PG S +E+
Sbjct: 629 NYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 226/527 (42%), Gaps = 57/527 (10%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLW 80
++ ++I + + H++ G LST +++ H + ++ +LF + L +
Sbjct: 26 AATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGH--ITYARKLFEEMPQSSLLSY 83
Query: 81 NAIIKAHSLSP--NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
N +I+ + + A +T+P++ K+ ++ LGL +H +
Sbjct: 84 NIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI 143
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
++S F +V NALL Y F A VF+ M RD +S+N MI+G+ R G ++
Sbjct: 144 LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDAL 203
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
+ M + D T+V++L C L+D +GR VH LV E LGD + NALV+
Sbjct: 204 MMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV--EEKRLGDKIEVKNALVN 261
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWT 318
MY KCG ++ A V R + V WT +++ Y GDVE A L M V
Sbjct: 262 MYLKCGRMDEARFVFD--RMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV---- 315
Query: 319 AMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
+P+ V + + +S C + G+ +H
Sbjct: 316 ---------------------------RPNAVTIASLVSVCGDALKVNDGKCLH------ 342
Query: 379 NWHCGQ----NGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
W Q + +++ MYAKC +D VF S K T +++II+G + L
Sbjct: 343 GWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS--KYHTGPWSAIIAGCVQNEL 400
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVD-EGKKPFESMSTVYGVNPQMEHY 493
A+ LF+ MR + P+ T +LL A ++ L D T G ++
Sbjct: 401 VSDALGLFKRMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAA 458
Query: 494 GCVVDLLGRGGLLSEAYHLILNMPFK---ANAVIWRALLSACKVHGD 537
+V + + G L A+ + + K + V+W AL+S +HGD
Sbjct: 459 TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 8/262 (3%)
Query: 287 TSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK 346
++L YA G + AR+LF++M + ++S+ +I Y G +K
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 347 --PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDT 404
PD L +++LG +H + +W G++ A++ MY G ++
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGR-ILRSWF-GRDKYVQNALLAMYMNFGKVEM 170
Query: 405 ALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCAC 464
A DVF + I +N++ISG +G A+ +F+ M + D T V++L C
Sbjct: 171 ARDVF--DVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 465 GHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVI 524
GH ++ G+ + + ++E +V++ + G + EA + M + + +
Sbjct: 229 GHLKDLEMGRN-VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVIT 286
Query: 525 WRALLSACKVHGDVELAKLACQ 546
W +++ GDVE A C+
Sbjct: 287 WTCMINGYTEDGDVENALELCR 308
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 249/508 (49%), Gaps = 47/508 (9%)
Query: 117 YLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPV- 175
YLLK C + H Q H + S S+ F N++ A+ + + P
Sbjct: 9 YLLKLCRTLKHLH---QFHAQFITSGRISNDFKQNSVF--------ANVLFAITSISPSA 57
Query: 176 ---RDCVSYNMMINGFVRAGRAGC-----------------SMKVLGDMRGFGIRPDEYT 215
++ VSY + F+ C S + +MR + PD +T
Sbjct: 58 SASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHT 117
Query: 216 LVTLLSACSSLE--DQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVV 273
+ AC++ + D + + +H R G L D +N L+ +Y+ ++ A ++
Sbjct: 118 FPFVFKACAAKKNGDLTLVKTLHCQALR-FGLLSD-LFTLNTLIRVYSLIAPIDSALQLF 175
Query: 274 SGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXX 333
N + V + L+ ++ AR LFD M RD+VSW ++ISGY+ +
Sbjct: 176 D--ENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREA 233
Query: 334 XXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVV 393
+KPD V +V+ LS CA+ G + G+ IH Y + +V
Sbjct: 234 IKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIH-DYTKRK-RLFIDSFLATGLV 291
Query: 394 DMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPD 453
D YAKCG IDTA+++F S KT +N++I+GLA HG G+ + F +M G+ PD
Sbjct: 292 DFYAKCGFIDTAMEIFELCSD--KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPD 349
Query: 454 GVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLI 513
GVTF+++L C HSGLVDE + F+ M ++Y VN +M+HYGC+ DLLGR GL+ EA +I
Sbjct: 350 GVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMI 409
Query: 514 LNMP----FKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADM 569
MP + + W LL C++HG++E+A+ A + A+ + G Y ++ M A+
Sbjct: 410 EQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANA 469
Query: 570 DQHDEAASVRKAID-NVGIQKPPGWSYV 596
++ +E VR+ ID + ++K G+S V
Sbjct: 470 ERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 193/474 (40%), Gaps = 90/474 (18%)
Query: 8 SSASYDRVKALLASSCRTIQQALQIQAHMVVTG-LHHD----------LFLSTALISFFA 56
SS SY L CRT++ Q A + +G + +D LF T++ +
Sbjct: 5 SSCSY------LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSAS 58
Query: 57 TNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXF-TF 115
+ + ++ +F +TNP F +N II+ +L + F TF
Sbjct: 59 ASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTF 118
Query: 116 PYLLKSCANARTPHLGL--QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
P++ K+CA + L L LHC ++ S +F N L+ Y + +A ++F++
Sbjct: 119 PFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDEN 178
Query: 174 PVRDCVSYNMMINGFVRA--------------------------GRAGC-----SMKVLG 202
P RD V+YN++I+G V+A G A ++K+
Sbjct: 179 PQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFD 238
Query: 203 DMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAK 262
+M G++PD +V+ LSAC+ D + G+ +H R+ L ++ L LVD YAK
Sbjct: 239 EMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKR--LFIDSFLATGLVDFYAK 296
Query: 263 CGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMIS 322
CG ++ A +F+ ++ + +W AMI+
Sbjct: 297 CGF---------------------------------IDTAMEIFELCSDKTLFTWNAMIT 323
Query: 323 GYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHC 382
G + G +KPD V ++ L C+ G ++ R + + +
Sbjct: 324 GLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVN 383
Query: 383 GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD---KKTTILYNSIISGLAHHG 433
+ + C + D+ + G I+ A ++ + KD ++ + ++ ++ G HG
Sbjct: 384 REMKHYGC-MADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHG 436
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/457 (29%), Positives = 243/457 (53%), Gaps = 17/457 (3%)
Query: 164 HNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSAC 223
NA+KVF+++P D +S +I FV+ R + + + GIRP+E+T T++ +
Sbjct: 44 RNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSS 103
Query: 224 SSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVV 283
++ D ++G+Q+H + +G L N + +A+++ Y K L A R R+ V
Sbjct: 104 TTSRDVKLGKQLHCYALK-MG-LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPN--V 159
Query: 284 AAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXX 343
+ T+L+S Y + + E A LF M ER VV+W A+I G+S G
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLRE 219
Query: 344 -XMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKC 399
+ P+E A++ + + + G+ IH +K+ + + N +++ Y+KC
Sbjct: 220 GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF----NVFVWNSLISFYSKC 275
Query: 400 GSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM-RLLGLVPDGVTFV 458
G+++ +L F K ++++ + +NS+I G AH+G G+ A+ +FE+M + L P+ VT +
Sbjct: 276 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTIL 335
Query: 459 ALLCACGHSGLVDEGKKPFESMSTVYGVNP---QMEHYGCVVDLLGRGGLLSEAYHLILN 515
+L AC H+GL+ EG F Y +P ++EHY C+VD+L R G EA LI +
Sbjct: 336 GVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKS 394
Query: 516 MPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEA 575
MP W+ALL C++H + LAKLA ++L ++ + YVMLSN + M+
Sbjct: 395 MPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNV 454
Query: 576 ASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSH 612
+ +R+ + G+++ G S++E+ + F+ DK++
Sbjct: 455 SLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNN 491
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 33/229 (14%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYC----------VFRD 162
FTF ++ S +R LG QLHC+ +K S+VFV +A+L+ Y F D
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 163 AHN---------------------AYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVL 201
+ A +F MP R V++N +I GF + GR ++
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 202 GDMRGFGIR-PDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMY 260
DM G+ P+E T ++A S++ G+ +H + LG N + N+L+ Y
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF-NVFVWNSLISFY 272
Query: 261 AKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
+KCG +E + + + + + +W S++ YA G E A +F++M
Sbjct: 273 SKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM 321
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/351 (39%), Positives = 197/351 (56%), Gaps = 17/351 (4%)
Query: 265 CLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGY 324
CL L +S V G +SLV Y G+VE A ++F++M ER+VVSWTAMISG+
Sbjct: 144 CLALKGGFISDVYLG-------SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGF 196
Query: 325 SHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQ 384
+ P++ A LS C GAL GR +H + H G
Sbjct: 197 AQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVH----CQTLHMGL 252
Query: 385 NGGF--TCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLF 442
+ +++ MY KCG + A +F + S K + +NS+I+G A HGL AI LF
Sbjct: 253 KSYLHISNSLISMYCKCGDLKDAFRIFDQFSN--KDVVSWNSMIAGYAQHGLAMQAIELF 310
Query: 443 E-EMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLG 501
E M G PD +T++ +L +C H+GLV EG+K F M+ +G+ P++ HY C+VDLLG
Sbjct: 311 ELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLG 369
Query: 502 RGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVM 561
R GLL EA LI NMP K N+VIW +LL +C+VHGDV A +E L +E D A +V
Sbjct: 370 RFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQ 429
Query: 562 LSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSH 612
L+N+ A + EAA+VRK + + G++ PG S++E+N + F A D S+
Sbjct: 430 LANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSN 480
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 152/335 (45%), Gaps = 39/335 (11%)
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
++SC R G HC +K F S V++ ++L+ Y + NAYKVFE+MP R+
Sbjct: 127 VRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNV 186
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
VS+ MI+GF + R +K+ MR P++YT LLSAC+ GR VH
Sbjct: 187 VSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQ 246
Query: 239 VYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGD 298
+G L + N+L+ MY KCG L+ A R+ N V +W S+++ YA G
Sbjct: 247 TL-HMG-LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKD--VVSWNSMIAGYAQHGL 302
Query: 299 VEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSE 358
A LF+ M + SG KPD + + LS
Sbjct: 303 AMQAIELFELMMPK---------SG---------------------TKPDAITYLGVLSS 332
Query: 359 CARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT 418
C G ++ GR+ AE+ + ++C +VD+ + G + AL++ + K
Sbjct: 333 CRHAGLVKEGRKF-FNLMAEHGLKPELNHYSC-LVDLLGRFGLLQEALELI-ENMPMKPN 389
Query: 419 TILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPD 453
++++ S++ HG I EE RL+ L PD
Sbjct: 390 SVIWGSLLFSCRVHGDVWTGIRAAEE-RLM-LEPD 422
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 5/266 (1%)
Query: 40 GLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXX 99
G D++L ++L+ + + + ++ ++F + ++ W A+I +
Sbjct: 150 GFISDVYLGSSLVVLY-RDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKL 208
Query: 100 XXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCV 159
+TF LL +C + G +HC + S++ ++N+L+ YC
Sbjct: 209 YSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCK 268
Query: 160 FRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLG-DMRGFGIRPDEYTLVT 218
D +A+++F+Q +D VS+N MI G+ + G A ++++ M G +PD T +
Sbjct: 269 CGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLG 328
Query: 219 LLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRN 278
+LS+C + GR+ L+ E G L + LVD+ + G L+ A ++ +
Sbjct: 329 VLSSCRHAGLVKEGRKFFNLM-AEHG-LKPELNHYSCLVDLLGRFGLLQEALELIENMPM 386
Query: 279 GKSVVAAWTSLVSAYASRGDVEVARR 304
+ V W SL+ + GDV R
Sbjct: 387 KPNSV-IWGSLLFSCRVHGDVWTGIR 411
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 238/466 (51%), Gaps = 46/466 (9%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
N+++H Y F +A K+F+QMP ++ +S+ MI G + R+G ++ + +M I+
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 211 PDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAE 270
+++AC++ +G QVHGL+ + LG L E
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIK-LGFL----------------------YE 259
Query: 271 RVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYX 330
VS SL++ YA+ + +R++FD+ V WTA++SGYS
Sbjct: 260 EYVSA------------SLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH 307
Query: 331 XXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGG 387
+ P++ + L+ C+ LG L+ G+ +H +K E +
Sbjct: 308 EDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET-----DAF 362
Query: 388 FTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRL 447
++V MY+ G+++ A+ VF K K K+ + +NSII G A HG GK+A +F +M
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFK--KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 448 LGLVPDGVTFVALLCACGHSGLVDEGKKPFESMST-VYGVNPQMEHYGCVVDLLGRGGLL 506
L PD +TF LL AC H G +++G+K F MS+ + ++ +++HY C+VD+LGR G L
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKL 480
Query: 507 SEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNML 566
EA LI M K N ++W ALLSAC++H DV+ + A + ++ A YV+LSN+
Sbjct: 481 KEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540
Query: 567 ADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSH 612
A + + +R + GI K PG S+V + G H+F +GD+ H
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH 586
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 171/398 (42%), Gaps = 33/398 (8%)
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
+ V + N LL R A +VF Q+P Y MI G+ R+ R ++ + +
Sbjct: 37 NREVLICNHLLS-----RRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDE 91
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKC 263
M +R D + +++S C D + ++ E+ + + A+V+ +
Sbjct: 92 M---PVR-DVVSWNSMISGCVECGDMNTAVK----LFDEMP--ERSVVSWTAMVNGCFRS 141
Query: 264 GCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISG 323
G ++ AER+ + + AAW S+V Y G V+ A +LF QM ++V+SWT MI G
Sbjct: 142 GKVDQAERLFYQMPVKDT--AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICG 199
Query: 324 YSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH-----LKYAAE 378
+K ++ CA A +G ++H L + E
Sbjct: 200 LDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYE 259
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
+ + +++ YA C I + VF K + ++ +++SG + + + A
Sbjct: 260 EY-------VSASLITFYANCKRIGDSRKVF--DEKVHEQVAVWTALLSGYSLNKKHEDA 310
Query: 439 ITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVD 498
+++F M ++P+ TF + L +C G +D GK+ ++ G+ +V
Sbjct: 311 LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE-MHGVAVKLGLETDAFVGNSLVV 369
Query: 499 LLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
+ G +++A + + + FK + V W +++ C HG
Sbjct: 370 MYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHG 406
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 2/272 (0%)
Query: 29 ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS 88
+Q+ ++ G ++ ++S +LI+F+A N + + S ++F + + +W A++ +S
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYA-NCKRIGDSRKVFDEKVHEQVAVWTALLSGYS 302
Query: 89 LSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVF 148
L+ H TF L SC+ T G ++H VK + F
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAF 362
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
V N+L+ Y + ++A VF ++ + VS+N +I G + GR + + G M
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
PDE T LLSACS GR++ + + + +VD+ +CG L+
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKE 482
Query: 269 AERVVSGVRNGKSVVAAWTSLVSAYASRGDVE 300
AE ++ + K W +L+SA DV+
Sbjct: 483 AEELIERMV-VKPNEMVWLALLSACRMHSDVD 513
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 114/219 (52%), Gaps = 8/219 (3%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
F ++ +CANA H+G+Q+H ++K F +V+ +L+ FY + ++ KVF++
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQ 234
+ +++G+ + ++ + M I P++ T + L++CS+L G++
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE 347
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
+HG+ + LG L +A + N+LV MY+ G + A V ++ K + +W S++ A
Sbjct: 348 MHGVAVK-LG-LETDAFVGNSLVVMYSDSGNVNDAVSVF--IKIFKKSIVSWNSIIVGCA 403
Query: 295 SRGDVEVARRLFDQM----GERDVVSWTAMISGYSHAGY 329
G + A +F QM E D +++T ++S SH G+
Sbjct: 404 QHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGF 442
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 154/516 (29%), Positives = 253/516 (49%), Gaps = 40/516 (7%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD 177
LL S A R+ GLQLH ++VKS VAN L++FY + ++ + FE P +
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
+++ +I+ F + S++ L M +RPD++ L + +C+ L +GR VH
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 238 LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
L + G D + ++LVDMYAKC G
Sbjct: 141 LSMK-TGYDAD-VFVGSSLVDMYAKC---------------------------------G 165
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS 357
++ AR++FD+M +R+VV+W+ M+ GY+ G + ++ + +S
Sbjct: 166 EIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVIS 225
Query: 358 ECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKK 417
CA LELGR+IH + ++V +Y+KCG + A VF + K
Sbjct: 226 VCANSTLLELGRQIHGLSIKS--SFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPV--K 281
Query: 418 TTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPF 477
++N+++ A H + I LF+ M+L G+ P+ +TF+ +L AC H+GLVDEG+ F
Sbjct: 282 NLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYF 341
Query: 478 ESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGD 537
+ M + P +HY +VD+LGR G L EA +I NMP +W ALL++C VH +
Sbjct: 342 DQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKN 400
Query: 538 VELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVE 597
ELA A ++ + ++ LSN A + ++AA RK + + G +K G S+VE
Sbjct: 401 TELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVE 460
Query: 598 MNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+H F AG++ H ++K L ++ ++ G
Sbjct: 461 ERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAG 496
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 192/451 (42%), Gaps = 49/451 (10%)
Query: 11 SYDRVKALLASSCRTIQ--QALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRL 68
+Y+++ LL SS RT + LQ+ ++V +GL ++ LI+F++ + S R
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPF-DSRRA 72
Query: 69 FSLVTNPDLFLWNAIIKAHSLSPNHA--FXXXXXXXXXXXXXXXXXFTFPYLLKSCANAR 126
F +P + N P KSCA
Sbjct: 73 FE--DSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILS 130
Query: 127 TPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMIN 186
+G +HC +K+ + + VFV ++L+ Y + A K+F++MP R+ V+++ M+
Sbjct: 131 RCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMY 190
Query: 187 GFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCL 246
G+ + G ++ + + + ++Y+ +++S C++ +GRQ+HGL +
Sbjct: 191 GYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSS--F 248
Query: 247 GDNALLVNALVDMYAKCGCLELAERVVS--GVRNGKSVVAAWTSLVSAYASRGDVEVARR 304
++ + ++LV +Y+KCG E A +V + V+N + W +++ AYA +
Sbjct: 249 DSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKN----LGIWNAMLKAYAQHSHTQKVIE 304
Query: 305 LFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGA 364
LF +M +SG MKP+ + + L+ C+ G
Sbjct: 305 LFKRMK----------LSG---------------------MKPNFITFLNVLNACSHAGL 333
Query: 365 LELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNS 424
++ G R + E+ ++VDM + G + AL+V D T ++ +
Sbjct: 334 VDEG-RYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID-PTESVWGA 390
Query: 425 IISGLAHHGLGKYAITLFEEMRLLGLVPDGV 455
+++ H + A +++ LG V G+
Sbjct: 391 LLTSCTVHKNTELAAFAADKVFELGPVSSGM 421
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 225/423 (53%), Gaps = 10/423 (2%)
Query: 212 DEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAER 271
D L +L +C + + + Q H +++ LG +LLV+ V Y +C LA R
Sbjct: 29 DHGMLKQVLESCKAPSNSKCVLQAHAQIFK-LGYGTYPSLLVST-VAAYRRCNRSYLARR 86
Query: 272 VVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGY-SHAGYX 330
++ + V ++ + G+ +A+++ +++V++W MI GY + Y
Sbjct: 87 LLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYE 146
Query: 331 XXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC 390
+KP++ ++L+ CARLG L + +H N +
Sbjct: 147 EALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL--NAILSS 204
Query: 391 AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL 450
A+VD+YAKCG I T+ +VF ++ + ++N++I+G A HGL AI +F EM +
Sbjct: 205 ALVDVYAKCGDIGTSREVFYSVKRNDVS--IWNAMITGFATHGLATEAIRVFSEMEAEHV 262
Query: 451 VPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAY 510
PD +TF+ LL C H GL++EGK+ F MS + + P++EHYG +VDLLGR G + EAY
Sbjct: 263 SPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAY 322
Query: 511 HLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMD 570
LI +MP + + VIWR+LLS+ + + + EL ++A Q L + YV+LSN+ +
Sbjct: 323 ELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTK 379
Query: 571 QHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVK 630
+ + A VR+ + GI+K G S++E G +H+F AGD SH E KA +L + K
Sbjct: 380 KWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTK 439
Query: 631 SIG 633
S G
Sbjct: 440 SQG 442
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 166 AYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF-GIRPDEYTLVTLLSACS 224
A KV ++ +++N+MI G+VR + ++K L +M F I+P++++ + L+AC+
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 225 SLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVA 284
L D + VH L+ + NA+L +ALVD+YAKCG + + V V+ ++ V+
Sbjct: 177 RLGDLHHAKWVHSLMID--SGIELNAILSSALVDVYAKCGDIGTSREVFYSVK--RNDVS 232
Query: 285 AWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAG 328
W ++++ +A+ G A R+F +M D +++ +++ SH G
Sbjct: 233 IWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
F+F L +CA H +H ++ S + +++AL+ Y D + +VF
Sbjct: 166 FSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYS 225
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
+ D +N MI GF G A +++V +M + PD T + LL+ CS G
Sbjct: 226 VKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEG 285
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
++ GL+ R + A+VD+ + G ++ A ++ + VV W SL+S+
Sbjct: 286 KEYFGLMSRRFS-IQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVV-IWRSLLSS 343
Query: 293 YASRGDVEVA 302
+ + E+
Sbjct: 344 SRTYKNPELG 353
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 158/557 (28%), Positives = 256/557 (45%), Gaps = 42/557 (7%)
Query: 68 LFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANART 127
LF + D+ WN +I ++ N + TF L
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 128 PHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMING 187
+G LHC +VK+ F + + AL+ Y +Y+V E +P +D V + +MI+G
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 188 FVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLG 247
+R GRA ++ V +M G + +++++C+ L +G VHG V R L
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 248 DNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
AL N+L+ MYAKCG L+ KS+V +F+
Sbjct: 381 TPAL--NSLITMYAKCGHLD------------KSLV---------------------IFE 405
Query: 308 QMGERDVVSWTAMISGYS-HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALE 366
+M ERD+VSW A+ISGY+ + + D VV+ L C+ GAL
Sbjct: 406 RMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALP 465
Query: 367 LGRRIH-LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSI 425
+G+ IH + + C A+VDMY+KCG ++ A C S K + + +
Sbjct: 466 VGKLIHCIVIRSFIRPCSL---VDTALVDMYSKCGYLEAAQR--CFDSISWKDVVSWGIL 520
Query: 426 ISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYG 485
I+G HG G A+ ++ E G+ P+ V F+A+L +C H+G+V +G K F SM +G
Sbjct: 521 IAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFG 580
Query: 486 VNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLAC 545
V P EH CVVDLL R + +A+ + + + +L AC+ +G E+ + C
Sbjct: 581 VEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIIC 640
Query: 546 QELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKF 605
++++ ++ YV L + A M + D+ + + ++G++K PGWS +EMNG F
Sbjct: 641 EDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTF 700
Query: 606 LAGDKSHPEAKATELML 622
SH + + L L
Sbjct: 701 FMNHTSHSDDTVSLLKL 717
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 167/371 (45%), Gaps = 62/371 (16%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
FTFP LLK+CA+ + GL +H ++ + F S +++++L++ Y F +A KVFE+
Sbjct: 47 FTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEE 106
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
M RD V + MI + RAG G + ++ +MR GI+P TL+ +LS
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGV--------- 157
Query: 233 RQVHGLVYRELGCLGDNALL---------VNALVDMYAKCGCLELAERVVSGVRNGKSVV 283
L +L CL D A++ +N+++++Y KC + A+ + + V
Sbjct: 158 -----LEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMV- 211
Query: 284 AAWTSLVSAYASRGDV-EVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
+W +++S YAS G++ E+ + L+ G+
Sbjct: 212 -SWNTMISGYASVGNMSEILKLLYRMRGD------------------------------- 239
Query: 343 XXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSI 402
++PD+ A+LS + LE+GR +H + + + A++ MY KCG
Sbjct: 240 -GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMH--LKTALITMYLKCGKE 296
Query: 403 DTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC 462
+ + V + K + + +ISGL G + A+ +F EM G +++
Sbjct: 297 EASYRVL--ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVA 354
Query: 463 ACGHSGLVDEG 473
+C G D G
Sbjct: 355 SCAQLGSFDLG 365
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 149/381 (39%), Gaps = 58/381 (15%)
Query: 181 YNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVY 240
+N IN G + M + PD +T +LL AC+SL+ G +H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIH---- 69
Query: 241 RELGCLGDNALLVNALV-DMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDV 299
+LVN D Y +SLV+ YA G +
Sbjct: 70 --------QQVLVNGFSSDFYIS------------------------SSLVNLYAKFGLL 97
Query: 300 EVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSEC 359
AR++F++M ERDVV WTAMI YS AG +KP V ++ LS
Sbjct: 98 AHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGV 157
Query: 360 ARLGALELGRRIHLKYAAENWHCGQNGGFTC------AVVDMYAKCGSIDTALDVFCKTS 413
+ L+ + Y GF C +++++Y KC + A D+F
Sbjct: 158 LEITQLQCLHDFAVIY-----------GFDCDIAVMNSMLNLYCKCDHVGDAKDLF--DQ 204
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
+++ + +N++ISG A G + L MR GL PD TF A L G ++ G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
+ G + M ++ + + G +Y ++ +P K + V W ++S
Sbjct: 265 RM-LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK-DVVCWTVMISGLM 322
Query: 534 VHGDVELAKLACQELLAVEHD 554
G E A + E+L D
Sbjct: 323 RLGRAEKALIVFSEMLQSGSD 343
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/485 (30%), Positives = 234/485 (48%), Gaps = 38/485 (7%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
+T+ L+ +C H G H LVKS + +LL Y D NA +VF +
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
D V + MI G+ G ++ + M+G I+P+ T+ ++LS C +E+ +G
Sbjct: 303 HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELG 362
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
R VHGL + +G N + NALV MYAKC
Sbjct: 363 RSVHGLSIK-VGIWDTN--VANALVHMYAKC----------------------------- 390
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
Y +R A+ +F+ E+D+V+W ++ISG+S G + P+ V V
Sbjct: 391 YQNRD----AKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
+ S CA LG+L +G +H + + A++D YAKCG +A +F
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF--D 504
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
+ ++K TI ++++I G G ++ LFEEM P+ TF ++L ACGH+G+V+E
Sbjct: 505 TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNE 564
Query: 473 GKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSAC 532
GKK F SM Y P +HY C+VD+L R G L +A +I MP + + + A L C
Sbjct: 565 GKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGC 624
Query: 533 KVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPG 592
+H +L ++ +++L + D + YV++SN+ A + ++A VR + G+ K G
Sbjct: 625 GMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAG 684
Query: 593 WSYVE 597
S +E
Sbjct: 685 HSTME 689
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 139/530 (26%), Positives = 220/530 (41%), Gaps = 60/530 (11%)
Query: 18 LLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDL 77
LL S C I Q + GL D+ ++T L+S + + + +F + PD
Sbjct: 49 LLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGF-FGYTKDARLVFDQIPEPDF 107
Query: 78 FLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCH 137
+LW +++ + L+ F LK+C + G ++HC
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCS 197
LVK +V V LL Y + +A+KVF + +R+ V + MI G+V+
Sbjct: 168 LVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALV 257
+ + MR + +EYT TL+ AC+ L G+ HG + + + ++ LV +L+
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS--GIELSSCLVTSLL 284
Query: 258 DMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSW 317
DMY KC GD+ ARR+F++ D+V W
Sbjct: 285 DMYVKC---------------------------------GDISNARRVFNEHSHVDLVMW 311
Query: 318 TAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH-LKYA 376
TAMI GY+H G +KP+ V + + LS C + LELGR +H L
Sbjct: 312 TAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIK 371
Query: 377 AENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGK 436
W + A+V MYAKC A VF + +K + +NSIISG + +G
Sbjct: 372 VGIW----DTNVANALVHMYAKCYQNRDAKYVF--EMESEKDIVAWNSIISGFSQNGSIH 425
Query: 437 YAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG--------KKPFESMSTVYGVNP 488
A+ LF M + P+GVT +L AC G + G K F + S+V+
Sbjct: 426 EALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTA 485
Query: 489 QMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDV 538
++ Y D ++ LI + + N + W A++ GD
Sbjct: 486 LLDFYAKCGD--------PQSARLIFDTIEEKNTITWSAMIGGYGKQGDT 527
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 183/442 (41%), Gaps = 51/442 (11%)
Query: 26 IQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAII- 84
+ Q +V +G+ L T+L+ + + ++ R+F+ ++ DL +W A+I
Sbjct: 258 LHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGD-ISNARRVFNEHSHVDLVMWTAMIV 316
Query: 85 -KAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
H+ S N A T +L C LG +H +K
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCV--TIASVLSGCGLIENLELGRSVHGLSIKVGI 374
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
VANAL+H Y +A VFE +D V++N +I+GF + G ++ +
Sbjct: 375 WD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHR 433
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLV-NALVDMYAK 262
M + P+ T+ +L SAC+SL VG +H + LG L +++ V AL+D YAK
Sbjct: 434 MNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK-LGFLASSSVHVGTALLDFYAK 492
Query: 263 CGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMIS 322
CG + A + + ++ W++++ Y +GD + LF++M ++
Sbjct: 493 CGDPQSARLIFDTIEEKNTI--TWSAMIGGYGKQGDTIGSLELFEEMLKKQ--------- 541
Query: 323 GYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHC 382
KP+E + LS C G + G++ +
Sbjct: 542 ----------------------QKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFT 579
Query: 383 GQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLF 442
+TC +VDM A+ G ++ ALD+ +K I + G HG G ++
Sbjct: 580 PSTKHYTC-MVDMLARAGELEQALDII------EKMPIQPDVRCFGAFLHGCGMHSRFDL 632
Query: 443 EEM---RLLGLVPDGVTFVALL 461
E+ ++L L PD ++ L+
Sbjct: 633 GEIVIKKMLDLHPDDASYYVLV 654
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 127/301 (42%), Gaps = 19/301 (6%)
Query: 259 MYAKCGCLELAERVVSGVRNGKSV---VAAWTSLVSAYASRGDVEVARRLFDQMGERDVV 315
+ +KC ++ + R GV G + ++ T LVS Y G + AR +FDQ+ E D
Sbjct: 50 LLSKCTNID-SLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFY 108
Query: 316 SWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKY 375
W M+ Y + D++ AL C L L+ G++IH +
Sbjct: 109 LWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQL 168
Query: 376 AAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLG 435
+ ++DMYAKCG I +A VF + + + + S+I+G + L
Sbjct: 169 VKVP---SFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT--LRNVVCWTSMIAGYVKNDLC 223
Query: 436 KYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGC 495
+ + LF MR ++ + T+ L+ AC + +GK + V +E C
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCL-----VKSGIELSSC 278
Query: 496 VV----DLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAV 551
+V D+ + G +S A + N + V+W A++ +G V A Q++ V
Sbjct: 279 LVTSLLDMYVKCGDISNARR-VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV 337
Query: 552 E 552
E
Sbjct: 338 E 338
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 242/510 (47%), Gaps = 50/510 (9%)
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVR 190
L L L+++ H F++ L + RD + + +VF Q N MI F
Sbjct: 32 ALLLRTSLIRNSDVFHHFLSRLALSL--IPRDINYSCRVFSQRLNPTLSHCNTMIRAFSL 89
Query: 191 AGRAGCSMKVLGDMRGFGIRP-DEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDN 249
+ ++ +R P + + L C D G Q+HG ++ + G L D
Sbjct: 90 SQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSD-GFLSD- 147
Query: 250 ALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
+LL+ L+D+Y+ C + A ++FD++
Sbjct: 148 SLLMTTLMDLYSTCE---------------------------------NSTDACKVFDEI 174
Query: 310 GERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXX---MKPDEVDVVAALSECARLGALE 366
+RD VSW + S Y +KPD V + AL CA LGAL+
Sbjct: 175 PKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALD 234
Query: 367 LGRRIHLKYAAENWHCGQNGGFTCA--VVDMYAKCGSIDTALDVFCKTSKDKKTTILYNS 424
G+++H + EN G +G + +V MY++CGS+D A VF ++ + + +
Sbjct: 235 FGKQVH-DFIDEN---GLSGALNLSNTLVSMYSRCGSMDKAYQVF--YGMRERNVVSWTA 288
Query: 425 IISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM-STV 483
+ISGLA +G GK AI F EM G+ P+ T LL AC HSGLV EG F+ M S
Sbjct: 289 LISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGE 348
Query: 484 YGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKL 543
+ + P + HYGCVVDLLGR LL +AY LI +M K ++ IWR LL AC+VHGDVEL +
Sbjct: 349 FKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGER 408
Query: 544 ACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALH 603
L+ ++ + YV+L N + + + ++ +R + I PG S +E+ G +H
Sbjct: 409 VISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVH 468
Query: 604 KFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+F+ D SHP + ML +IN +K G
Sbjct: 469 EFIVDDVSHPRKEEIYKMLAEINQQLKIAG 498
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 164/345 (47%), Gaps = 30/345 (8%)
Query: 1 MLHPLASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGL-------HHDLFLSTALIS 53
ML ++SSS D + +L+ SS + QI A ++ T L HH FLS +S
Sbjct: 1 MLKSISSSSGD-DHLLSLIVSSTGKLHLR-QIHALLLRTSLIRNSDVFHH--FLSRLALS 56
Query: 54 FFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS--PNHAFXXXXXXXXXXXXXXXX 111
R + +S R+FS NP L N +I+A SLS P F
Sbjct: 57 LIP---RDINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANP 113
Query: 112 XFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFE 171
+ + LK C + GLQ+H + F S + L+ Y ++ +A KVF+
Sbjct: 114 -LSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFD 172
Query: 172 QMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF---GIRPDEYTLVTLLSACSSLED 228
++P RD VS+N++ + ++R R + + M+ ++PD T + L AC++L
Sbjct: 173 EIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGA 232
Query: 229 QRVGRQVHGLVYRELGCLGDNAL-LVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWT 287
G+QVH + E G G AL L N LV MY++CG ++ A +V G+R V +WT
Sbjct: 233 LDFGKQVHDFI-DENGLSG--ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERN--VVSWT 287
Query: 288 SLVSAYASRGDVEVARRLFDQMGERDVV----SWTAMISGYSHAG 328
+L+S A G + A F++M + + + T ++S SH+G
Sbjct: 288 ALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSG 332
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 126/311 (40%), Gaps = 18/311 (5%)
Query: 29 ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH- 87
LQI + G D L T L+ ++T + + ++F + D WN + +
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENST-DACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 88 --SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHS 145
+ + T L++CAN G Q+H + ++
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 146 HVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMR 205
+ ++N L+ Y AY+VF M R+ VS+ +I+G G +++ +M
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN-----ALVDMY 260
FGI P+E TL LLSACS G G+++ + G+ + N +VD+
Sbjct: 311 KFGISPEEQTLTGLLSACS-----HSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLL 365
Query: 261 AKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE---RDVVSW 317
+ L+ A ++ + K W +L+ A GDVE+ R+ + E + +
Sbjct: 366 GRARLLDKAYSLIKSMEM-KPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDY 424
Query: 318 TAMISGYSHAG 328
+++ YS G
Sbjct: 425 VLLLNTYSTVG 435
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 167/597 (27%), Positives = 283/597 (47%), Gaps = 43/597 (7%)
Query: 15 VKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTN 74
VK L ASS ++ I ++++V G+ ++ L T+L+ F++ + + ++R+ +
Sbjct: 229 VKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK-MEDAVRVLNSSGE 287
Query: 75 PDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQL 134
D+FLW +++ + FT+ +L C+ R+ G Q+
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 135 HCHLVKSRFHSHVFVANALLHFY--CVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG 192
H +K F V NAL+ Y C + A +VF M + VS+ +I G V G
Sbjct: 348 HSQTIKVGFEDSTDVGNALVDMYMKCSASEVE-ASRVFGAMVSPNVVSWTTLILGLVDHG 406
Query: 193 RAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALL 252
+L +M + P+ TL +L ACS L R ++H A L
Sbjct: 407 FVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIH-------------AYL 453
Query: 253 VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER 312
+ VD G+ VV SLV AYAS V+ A + M R
Sbjct: 454 LRRHVD--------------------GEMVVG--NSLVDAYASSRKVDYAWNVIRSMKRR 491
Query: 313 DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH 372
D +++T++++ ++ G ++ D++ + +S A LGALE G+ +H
Sbjct: 492 DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLH 551
Query: 373 LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHH 432
Y+ ++ G ++VDMY+KCGS++ A VF + + + +N ++SGLA +
Sbjct: 552 C-YSVKSGFSGA-ASVLNSLVDMYSKCGSLEDAKKVFEEIATPD--VVSWNGLVSGLASN 607
Query: 433 GLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEH 492
G A++ FEEMR+ PD VTF+ LL AC + L D G + F+ M +Y + PQ+EH
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEH 667
Query: 493 YGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVE 552
Y +V +LGR G L EA ++ M K NA+I++ LL AC+ G++ L + + LA+
Sbjct: 668 YVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALA 727
Query: 553 HDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGD 609
A Y++L+++ + + + A R + + K G S VE+ G +H F++ D
Sbjct: 728 PSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSED 784
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 179/428 (41%), Gaps = 47/428 (10%)
Query: 118 LLKSC------ANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFE 171
L KSC + + +GL +HC ++K ++ + N LL Y NA K+F+
Sbjct: 23 LQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFD 82
Query: 172 QMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRV 231
+M R ++ +MI+ F ++ ++ + +M G P+E+T +++ +C+ L D
Sbjct: 83 EMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISY 142
Query: 232 GRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVS 291
G +VHG V + G G N+++ ++L D+Y+KCG + A + S ++N
Sbjct: 143 GGRVHGSVIKT-GFEG-NSVVGSSLSDLYSKCGQFKEACELFSSLQNA------------ 188
Query: 292 AYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVD 351
D +SWT MIS A + P+E
Sbjct: 189 ---------------------DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 352 VVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK 411
V L + LG LE G+ IH N ++VD Y++ ++ A+ V
Sbjct: 228 FVKLLGASSFLG-LEFGKTIHSNIIVRG--IPLNVVLKTSLVDFYSQFSKMEDAVRVL-- 282
Query: 412 TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVD 471
S ++ L+ S++SG + K A+ F EMR LGL P+ T+ A+L C +D
Sbjct: 283 NSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLD 342
Query: 472 EGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA 531
GK+ S + G + +VD+ + + N V W L+
Sbjct: 343 FGKQ-IHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILG 401
Query: 532 CKVHGDVE 539
HG V+
Sbjct: 402 LVDHGFVQ 409
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 189/438 (43%), Gaps = 44/438 (10%)
Query: 29 ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS 88
L I ++ GL +L L L+S + + ++ +LF +++ +F W +I A +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTD-GIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 89 LSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVF 148
S A FTF +++SCA R G ++H ++K+ F +
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
V ++L Y A ++F + D +S+ MMI+ V A + +++ +M G
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVH-GLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
+ P+E+T V LL A SS G+ +H ++ R + N +L +LVD Y++ +E
Sbjct: 221 VPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPL---NVVLKTSLVDFYSQFSKME 276
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
A RV++ +G+ V WTS+VS + + A F +M
Sbjct: 277 DAVRVLNS--SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM------------------ 316
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG 387
++P+ A LS C+ + +L+ G++IH + + + G
Sbjct: 317 -------------RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 388 FTCAVVDMYAKCGSIDT-ALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR 446
A+VDMY KC + + A VF + + + ++I GL HG + L EM
Sbjct: 364 --NALVDMYMKCSASEVEASRVF--GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 447 LLGLVPDGVTFVALLCAC 464
+ P+ VT +L AC
Sbjct: 420 KREVEPNVVTLSGVLRAC 437
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 130/591 (21%), Positives = 233/591 (39%), Gaps = 61/591 (10%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
R I ++ ++ TG + + ++L ++ + + + LFS + N D W +
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ-FKEACELFSSLQNADTISWTMM 196
Query: 84 IKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQ----LHCHLV 139
I + + FTF LL + + LGL+ +H +++
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-----SSFLGLEFGKTIHSNII 251
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMK 199
+V + +L+ FY F +A +V +D + +++GFVR RA ++
Sbjct: 252 VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVG 311
Query: 200 VLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDM 259
+MR G++P+ +T +LS CS++ G+Q+H + +G D+ + NALVDM
Sbjct: 312 TFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK-VG-FEDSTDVGNALVDM 369
Query: 260 YAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTA 319
Y KC E+ A R+F M +VVSWT
Sbjct: 370 YMKCSASEVE--------------------------------ASRVFGAMVSPNVVSWTT 397
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
+I G G+ ++P+ V + L C++L + IH
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRR- 456
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAI 439
H ++VD YA +D A +V S ++ I Y S+++ G + A+
Sbjct: 457 -HVDGEMVVGNSLVDAYASSRKVDYAWNVI--RSMKRRDNITYTSLVTRFNELGKHEMAL 513
Query: 440 TLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDL 499
++ M G+ D ++ + A + G ++ GK S G + +VD+
Sbjct: 514 SVINYMYGDGIRMDQLSLPGFISASANLGALETGKH-LHCYSVKSGFSGAASVLNSLVDM 572
Query: 500 LGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELL--AVEHDHGA 557
+ G L +A + + + V W L+S +G + A A +E+ E D
Sbjct: 573 YSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVT 631
Query: 558 RYVMLS----NMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHK 604
++LS L D+ E V K I N+ +P YV + G L +
Sbjct: 632 FLILLSACSNGRLTDLGL--EYFQVMKKIYNI---EPQVEHYVHLVGILGR 677
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/612 (26%), Positives = 289/612 (47%), Gaps = 64/612 (10%)
Query: 29 ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS 88
LQ+Q+ +V TGL DL + + I+ ++ + + R + R+F ++ D+ WN+++ S
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSG-SFRGARRVFDEMSFKDMISWNSLLSGLS 251
Query: 89 LSPNHAFXXXXXXXXXXXXXXXXX-FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
F +F ++ +C + L Q+H +K + S +
Sbjct: 252 QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 311
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
V N L+ Y VF QM R+ VS+ MI + ++ + +MR
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFD 366
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
G+ P+E T V L++A E + G ++HGL C++
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGL--------------------------CIK 400
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
+G + SV S ++ YA +E A++ F+ + R+++SW AMISG++
Sbjct: 401 ------TGFVSEPSV---GNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 451
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG--ALELGRRIHLKYAAENWHCGQN 385
G+ M P+E + L+ A +++ G+R H H +
Sbjct: 452 GFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHA-------HLLKL 503
Query: 386 GGFTCAVV-----DMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAIT 440
G +C VV DMYAK G+ID + VF + S+ K ++ SIIS + HG + +
Sbjct: 504 GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ--KNQFVWTSIISAYSSHGDFETVMN 561
Query: 441 LFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLL 500
LF +M + PD VTF+++L AC G+VD+G + F M VY + P EHY C+VD+L
Sbjct: 562 LFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDML 621
Query: 501 GRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYV 560
GR G L EA L+ +P + +++L +C++HG+V++ + + ++ + YV
Sbjct: 622 GRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYV 681
Query: 561 MLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNG-----ALHKFLAGDKSHPEA 615
+ N+ A+ ++ D+AA +RKA+ + K G+S++++ + F +GDKSHP++
Sbjct: 682 QMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKS 741
Query: 616 KATELMLRDINM 627
M+ I +
Sbjct: 742 DEIYRMVEIIGL 753
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 223/534 (41%), Gaps = 60/534 (11%)
Query: 13 DRVKALLA-SSCR-TIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFS 70
D V LA +CR +++ QI +G + +S A++ + R ++L +F
Sbjct: 77 DEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGR-FDNALCIFE 135
Query: 71 LVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHL 130
+ +PD+ WN I+ ++ FT+ L C + L
Sbjct: 136 NLVDPDVVSWNTILSGFD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL 192
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVR 190
GLQL +VK+ S + V N+ + Y A +VF++M +D +S+N +++G +
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 191 AGRAGC-SMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDN 249
G G ++ + DM G+ D + ++++ C D ++ RQ+HGL + G
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR----GYE 308
Query: 250 ALLV--NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
+LL N L+ Y+KCG LE + V F
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSV---------------------------------FH 335
Query: 308 QMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALEL 367
QM ER+VVSWT MIS + P+EV V ++ ++
Sbjct: 336 QMSERNVVSWTTMISSNKDDA-----VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKE 390
Query: 368 GRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIIS 427
G +IH + + G + + +YAK +++ A F + + I +N++IS
Sbjct: 391 GLKIHGLCIKTGFVSEPSVG--NSFITLYAKFEALEDAKKAFEDIT--FREIISWNAMIS 446
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSG--LVDEGKKPFESMSTVYG 485
G A +G A+ +F + P+ TF ++L A + V +G++ + + G
Sbjct: 447 GFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL-G 504
Query: 486 VNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVE 539
+N ++D+ + G + E+ + M K N +W +++SA HGD E
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK-NQFVWTSIISAYSSHGDFE 557
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 236/477 (49%), Gaps = 47/477 (9%)
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVR 190
G LH HLV S +A L+ FY +A KVF++MP RD +MI R
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 191 AGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNA 250
G S+ +M G++ D + + +LL A +L D+ G+ +H LV + +A
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLK--FSYESDA 152
Query: 251 LLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG 310
+V++L+DMY+K G + A +V S + G+ + + +++S YA+ + A L M
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDL--GEQDLVVFNAMISGYANNSQADEALNLVKDMK 210
Query: 311 ----ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVD--------------- 351
+ DV++W A+ISG+SH KPD V
Sbjct: 211 LLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNE 270
Query: 352 --------------------VVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCA 391
++ L C L ++ G+ IH +G A
Sbjct: 271 KAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLE--DHGFVRSA 328
Query: 392 VVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLV 451
++DMY KCG I A+ +F KT K KTT+ +NS+I A+HGL A+ LF++M G
Sbjct: 329 LLDMYGKCGFISEAMILFRKTPK--KTTVTFNSMIFCYANHGLADKAVELFDQMEATGEK 386
Query: 452 PDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYH 511
D +TF A+L AC H+GL D G+ F M Y + P++EHY C+VDLLGR G L EAY
Sbjct: 387 LDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYE 446
Query: 512 LILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLAD 568
+I M + + +W ALL+AC+ HG++ELA++A + L +E ++ ++L+++ A+
Sbjct: 447 MIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYAN 503
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 15/285 (5%)
Query: 27 QQALQIQAHMVVTGLHHDLFLSTALISFFA--TNHRALRHSLRLFSLV-TNPDLFLWNAI 83
+AL + M + G+ D+ ALIS F+ N + L L L PD+ W +I
Sbjct: 200 DEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSI 259
Query: 84 IKA--HSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKS 141
I H+ AF T LL +C G ++H + V +
Sbjct: 260 ISGLVHNFQNEKAFDAFKQMLTHGLYPNSA--TIITLLPACTTLAYMKHGKEIHGYSVVT 317
Query: 142 RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVL 201
H FV +ALL Y A +F + P + V++N MI + G A ++++
Sbjct: 318 GLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELF 377
Query: 202 GDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLV---YRELGCLGDNALLVNALVD 258
M G + D T +L+ACS +G+ + L+ YR + L A +VD
Sbjct: 378 DQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYA----CMVD 433
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVAR 303
+ + G L A ++ +R + W +L++A + G++E+AR
Sbjct: 434 LLGRAGKLVEAYEMIKAMRMEPDLF-VWGALLAACRNHGNMELAR 477
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/547 (28%), Positives = 249/547 (45%), Gaps = 77/547 (14%)
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
++C+N G LH VK+ S FV +++ FY + AY F ++ D
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
S+ +I R+G S + +M+ G+ PD + L++ + G+ HG
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 239 VYRELGCLGDNALLVNALVDMYA----------------------------------KC- 263
V R C ++ + N+L+ MY KC
Sbjct: 357 VIRH--CFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCH 414
Query: 264 -GCLELAERV---------------------VSGVRNGKSV------------VAAWTSL 289
C+EL ++ + V GKS+ ++ SL
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 290 VSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE 349
+ Y GD+ VA R+F + + +V++W AMI+ Y H KP
Sbjct: 475 IDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 350 VDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
+ +V L C G+LE G+ IH +Y E H N + A++DMYAKCG ++ + ++F
Sbjct: 534 ITLVTLLMACVNTGSLERGQMIH-RYITETEH-EMNLSLSAALIDMYAKCGHLEKSRELF 591
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+ ++K + +N +ISG HG + AI LF++M + P G TF+ALL AC H+GL
Sbjct: 592 --DAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGL 649
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
V++GKK F M Y V P ++HY C+VDLL R G L EA +++MPF + VIW LL
Sbjct: 650 VEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLL 708
Query: 530 SACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQK 589
S+C HG+ E+ + +A + + Y+ML+NM + + +EA R+ + G+ K
Sbjct: 709 SSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGK 768
Query: 590 PPGWSYV 596
G S V
Sbjct: 769 RAGHSVV 775
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 242/537 (45%), Gaps = 50/537 (9%)
Query: 2 LHPLASSSASY-DR-VKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNH 59
L L+SSSASY DR + +L +++ + A ++ GL ++F+++ LIS +A+
Sbjct: 14 LRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYG 73
Query: 60 RALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLL 119
+ S R+F LVT D+FLWN+IIKAH + ++A FT P ++
Sbjct: 74 KP-NLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVV 132
Query: 120 KSCANARTPHLGLQLHCHLVK-SRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
+CA H+G +H ++K F + V + ++FY +A VF++MP RD
Sbjct: 133 SACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDV 192
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGI---RPDEYTLVTLLSACSSLEDQRVGRQV 235
V++ +I+G V+ G + + L M G +P+ TL ACS+L + GR +
Sbjct: 193 VAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCL 252
Query: 236 HGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYAS 295
HG + L + + +++ Y+K G +E +S G + +WTS++++ A
Sbjct: 253 HGFAVKN--GLASSKFVQSSMFSFYSKSG--NPSEAYLSFRELGDEDMFSWTSIIASLAR 308
Query: 296 RGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAA 355
GD+E + +F +M + M PD V +
Sbjct: 309 SGDMEESFDMFWEMQNKG-------------------------------MHPDGVVISCL 337
Query: 356 LSECARLGALELGRRIHLKYAAENWHCGQNGGFTC-AVVDMYAKCGSIDTALDVFCKTSK 414
++E ++ + G+ H HC C +++ MY K + A +FC+ S+
Sbjct: 338 INELGKMMLVPQGKAFHGFVIR---HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISE 394
Query: 415 DKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
+ +N+++ G I LF +++ LG+ D + +++ +C H G V GK
Sbjct: 395 EGNKEA-WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGK 453
Query: 475 KPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA 531
++ + ++DL G+ G L+ A+ + N + W A++++
Sbjct: 454 S-LHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA--DTNVITWNAMIAS 507
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 100/259 (38%), Gaps = 14/259 (5%)
Query: 287 TSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK 346
+ L+S+YAS G ++ R+F + RD+ W ++I + G
Sbjct: 63 SKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS 122
Query: 347 PDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSID 403
PD +S CA L +G +H LK+ + +N + V Y+KCG +
Sbjct: 123 PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFD----RNTAVGASFVYFYSKCGFLQ 178
Query: 404 TALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC- 462
A VF + + + +IISG +G + + +M G D L C
Sbjct: 179 DACLVF--DEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 463 --ACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKA 520
AC + G + EG + + G+ + + G SEAY L
Sbjct: 237 FQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY-LSFRELGDE 294
Query: 521 NAVIWRALLSACKVHGDVE 539
+ W +++++ GD+E
Sbjct: 295 DMFSWTSIIASLARSGDME 313
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 255/477 (53%), Gaps = 30/477 (6%)
Query: 165 NAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACS 224
+A K++E +P +D ++ MI+G + GR + ++ +M E +++T + +
Sbjct: 159 DACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM-------SERSVITWTTMVT 211
Query: 225 SL-EDQRV--GRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKS 281
++ RV R++ ++ + + L+ Y + G +E AE + V K
Sbjct: 212 GYGQNNRVDDARKIFDVMPEKTEVSWTSMLM------GYVQNGRIEDAEELFE-VMPVKP 264
Query: 282 VVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXX 341
V+A +++S +G++ ARR+FD M ER+ SW +I + G+
Sbjct: 265 VIAC-NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQ 323
Query: 342 XXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVV--DMYAKC 399
++P +++ LS CA L +L G+++H + C + A V MY KC
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV----RCQFDVDVYVASVLMTMYIKC 379
Query: 400 GSIDTALDVFCK-TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLV-PDGVTF 457
G + + +F + SKD I++NSIISG A HGLG+ A+ +F EM L G P+ VTF
Sbjct: 380 GELVKSKLIFDRFPSKD---IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTF 436
Query: 458 VALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP 517
VA L AC ++G+V+EG K +ESM +V+GV P HY C+VD+LGR G +EA +I +M
Sbjct: 437 VATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT 496
Query: 518 FKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAAS 577
+ +A +W +LL AC+ H +++A+ ++L+ +E ++ Y++LSNM A + + A
Sbjct: 497 VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAE 556
Query: 578 VRKAIDNVGIQKPPGWSYVEMNGALHKFLAGD-KSHPEAKATELMLRDINMGVKSIG 633
+RK + ++K PG S+ E+ +H F G SHPE ++ +L +++ ++ G
Sbjct: 557 LRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAG 613
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 9/240 (3%)
Query: 67 RLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYL---LKSCA 123
R+F + + W +IK H + F TFP L L CA
Sbjct: 286 RVFDSMKERNDASWQTVIKIHE---RNGFELEALDLFILMQKQGVRPTFPTLISILSVCA 342
Query: 124 NARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNM 183
+ + H G Q+H LV+ +F V+VA+ L+ Y + + +F++ P +D + +N
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNS 402
Query: 184 MINGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRE 242
+I+G+ G ++KV +M G +P+E T V LSACS G +++ +
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESV 462
Query: 243 LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVA 302
G A +VDM + G A ++ + + A W SL+ A + ++VA
Sbjct: 463 FGVKPITAHYA-CMVDMLGRAGRFNEAMEMIDSM-TVEPDAAVWGSLLGACRTHSQLDVA 520
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 107/263 (40%), Gaps = 59/263 (22%)
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
+ +W LVS Y G+++ AR++FD M ER+VVSWTA++ GY H G
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNG-------------- 124
Query: 343 XXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDM-YAKCGS 401
+VDV +L W + + V+ + + + G
Sbjct: 125 ------KVDVAESLF----------------------WKMPEKNKVSWTVMLIGFLQDGR 156
Query: 402 IDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL 461
ID A ++ K I S+I GL G A +F+EM + +T+ ++
Sbjct: 157 IDDACKLYEMIP--DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMV 210
Query: 462 CACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLG--RGGLLSEAYHLILNMPFK 519
G + VD+ +K F+ M P+ L+G + G + +A L MP K
Sbjct: 211 TGYGQNNRVDDARKIFDVM-------PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK 263
Query: 520 ANAVIWRALLSACKVHGDVELAK 542
+ A++S G++ A+
Sbjct: 264 P-VIACNAMISGLGQKGEIAKAR 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 249 NALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLF 306
N + N LV Y K G ++ A +V + RN V +WT+LV Y G V+VA LF
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERN----VVSWTALVKGYVHNGKVDVAESLF 133
Query: 307 DQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV--VAALSECARLGA 364
+M E++ VSWT M+ G+ G M PD+ ++ + + + G
Sbjct: 134 WKMPEKNKVSWTVMLIGFLQDG------RIDDACKLYEMIPDKDNIARTSMIHGLCKEGR 187
Query: 365 LELGRRIHLKYAAEN---WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL 421
++ R I + + + W +V Y + +D A +F +KT +
Sbjct: 188 VDEAREIFDEMSERSVITW---------TTMVTGYGQNNRVDDARKIF--DVMPEKTEVS 236
Query: 422 YNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMS 481
+ S++ G +G + A LFE M V + A++ G G + + ++ F+SM
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMP----VKPVIACNAMISGLGQKGEIAKARRVFDSMK 292
Query: 482 TVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKV 534
+ Q V+ + R G EA L + M + + L+S V
Sbjct: 293 ERNDASWQ-----TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 246/506 (48%), Gaps = 45/506 (8%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG 192
Q+H HL+ + + + L+ C R + +F +P+ D +N +I +
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLR 86
Query: 193 RAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALL 252
+ M + P YT +++ +C+ L R+G+ VH + + G + +
Sbjct: 87 LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVH--CHAVVSGFGLDTYV 144
Query: 253 VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER 312
ALV Y+KCG D+E AR++FD+M E+
Sbjct: 145 QAALVTFYSKCG---------------------------------DMEGARQVFDRMPEK 171
Query: 313 DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH 372
+V+W +++SG+ G +PD V+ LS CA+ GA+ LG +H
Sbjct: 172 SIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVH 231
Query: 373 LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL-YNSIISGLAH 431
+E N A++++Y++CG + A +VF K K+T + + ++IS
Sbjct: 232 QYIISEGLDL--NVKLGTALINLYSRCGDVGKAREVF---DKMKETNVAAWTAMISAYGT 286
Query: 432 HGLGKYAITLFEEMRL-LGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQM 490
HG G+ A+ LF +M G +P+ VTFVA+L AC H+GLV+EG+ ++ M+ Y + P +
Sbjct: 287 HGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGV 346
Query: 491 EHYGCVVDLLGRGGLLSEAYHLI--LNMPFKANA-VIWRALLSACKVHGDVELAKLACQE 547
EH+ C+VD+LGR G L EAY I L+ KA A +W A+L ACK+H + +L +
Sbjct: 347 EHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKR 406
Query: 548 LLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLA 607
L+A+E D+ +VMLSN+ A + DE + +R + ++K G+S +E+ + F
Sbjct: 407 LIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSM 466
Query: 608 GDKSHPEAKATELMLRDINMGVKSIG 633
GD+SH E L + K IG
Sbjct: 467 GDESHQETGEIYRYLETLISRCKEIG 492
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 215/455 (47%), Gaps = 44/455 (9%)
Query: 1 MLHPLASSSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHR 60
M +A++SA+Y+ A++ + R ++Q Q+ AH++VTG L T LI+ A + R
Sbjct: 1 MTTKVAANSAAYE---AIVRAGPR-VKQLQQVHAHLIVTGYGRSRSLLTKLITL-ACSAR 55
Query: 61 ALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLK 120
A+ ++ LF V PD FL+N++IK+ S +TF ++K
Sbjct: 56 AIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIK 115
Query: 121 SCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVS 180
SCA+ +G +HCH V S F +V AL+ FY D A +VF++MP + V+
Sbjct: 116 SCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVA 175
Query: 181 YNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVY 240
+N +++GF + G A +++V MR G PD T V+LLSAC+ +G VH +
Sbjct: 176 WNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII 235
Query: 241 RELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVE 300
E L N L AL+++Y++CG + A V ++ ++ VAAWT+++SAY + G +
Sbjct: 236 SE--GLDLNVKLGTALINLYSRCGDVGKAREVFDKMK--ETNVAAWTAMISAYGTHGYGQ 291
Query: 301 VARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECA 360
A LF++M E D P+ V VA LS CA
Sbjct: 292 QAVELFNKM-EDDCGPI-----------------------------PNNVTFVAVLSACA 321
Query: 361 RLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTT- 419
G +E GR ++ K +++ +VDM + G +D A + K T
Sbjct: 322 HAGLVEEGRSVY-KRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 420 -ILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPD 453
L+ +++ H Y + + RL+ L PD
Sbjct: 381 PALWTAMLGACKMH--RNYDLGVEIAKRLIALEPD 413
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 154/578 (26%), Positives = 271/578 (46%), Gaps = 45/578 (7%)
Query: 43 HDLFLSTALISFFATNHRALRHSLR-LFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXX 101
H + + ++S+F + L R LF + + D+ W A+I ++ S +A
Sbjct: 44 HHILATNLIVSYF---EKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 102 XXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFR 161
FT +LKSC N + G +H +VK ++V NA+++ Y
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 162 -DAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLL 220
A +F + V++ V++ +I GF G +K+ M Y + +
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 221 SACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGK 280
A +S++ G+Q+H V + N ++N+++D+Y +CG L
Sbjct: 221 RASASIDSVTTGKQIHASVIKR--GFQSNLPVMNSILDLYCRCGYLS------------- 265
Query: 281 SVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXX 340
A+ F +M ++D+++W +IS +
Sbjct: 266 --------------------EAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFE 305
Query: 341 XXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCG 400
+ P+ + ++ CA + AL G+++H + ++ +N A++DMYAKCG
Sbjct: 306 SQGFV-PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN--KNVELANALIDMYAKCG 362
Query: 401 SIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVAL 460
+I + VF + D++ + + S++ G HG G A+ LF++M G+ PD + F+A+
Sbjct: 363 NIPDSQRVFGEIV-DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAV 421
Query: 461 LCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKA 520
L AC H+GLV++G K F M + YG+NP + Y CVVDLLGR G + EAY L+ MPFK
Sbjct: 422 LSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKP 481
Query: 521 NAVIWRALLSACKVHG-DVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVR 579
+ W A+L ACK H + +++LA ++++ ++ YVMLS + A + + A VR
Sbjct: 482 DESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVR 541
Query: 580 KAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKA 617
K + +G +K G S++ + + F DK P A +
Sbjct: 542 KMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASS 579
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 39/390 (10%)
Query: 22 SCRTIQQ-ALQIQAHMVVT--GLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLF 78
SCR ++ A H VV G+ L++ A+++ +AT + + +F + +
Sbjct: 120 SCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDV 179
Query: 79 LWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
W +I + + + +++ A+ + G Q+H +
Sbjct: 180 TWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASV 239
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
+K F S++ V N++L YC A F +M +D +++N +I+ R+ + ++
Sbjct: 240 IKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE-AL 298
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
+ G P+ YT +L++AC+++ G+Q+HG ++R N L NAL+D
Sbjct: 299 LMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR--GFNKNVELANALID 356
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWT 318
MYAKCG + ++RV + + +++V +WTS++ Y S G A LFD+M
Sbjct: 357 MYAKCGNIPDSQRVFGEIVDRRNLV-SWTSMMIGYGSHGYGAEAVELFDKM--------- 406
Query: 319 AMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
+ SG ++PD + +A LS C G +E G + +E
Sbjct: 407 -VSSG---------------------IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESE 444
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALDV 408
+ C VVD+ + G I A ++
Sbjct: 445 YGINPDRDIYNC-VVDLLGRAGKIGEAYEL 473
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 114/258 (44%), Gaps = 8/258 (3%)
Query: 20 ASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFL 79
++S ++ QI A ++ G +L + +++ + L + F + + DL
Sbjct: 223 SASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGY-LSEAKHYFHEMEDKDLIT 281
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
WN +I S + + +TF L+ +CAN + G QLH +
Sbjct: 282 WNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIF 340
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVF-EQMPVRDCVSYNMMINGFVRAGRAGCSM 198
+ F+ +V +ANAL+ Y + ++ +VF E + R+ VS+ M+ G+ G ++
Sbjct: 341 RRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAV 400
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
++ M GIRPD + +LSAC G + ++ E G D + N +VD
Sbjct: 401 ELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIY-NCVVD 459
Query: 259 MYAKCGCL----ELAERV 272
+ + G + EL ER+
Sbjct: 460 LLGRAGKIGEAYELVERM 477
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 168/605 (27%), Positives = 270/605 (44%), Gaps = 51/605 (8%)
Query: 49 TALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXX 108
T+ I+ A + R + + ++F + D WN ++ ++S H
Sbjct: 8 TSKIASLAKSGR-IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 109 XXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFY--C-------- 158
++F +L +CA+ G ++ +++S F + + V N+L+ Y C
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 159 VFRDA-----------------------HNAYKVFEQMPVRDCVSYNMMINGFVRAGRAG 195
VFRD A VF +MP R ++N+MI+G G+
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 196 CSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRV-GRQVHGLVYRELGCLGDNALLVN 254
+ + +M +PD YT +L++ACS+ V GR VH ++ + A N
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEA--KN 244
Query: 255 ALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV 314
+++ Y K G + A R + + V +W S++ A G+ E A +F E+++
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQV--SWNSIIDACMKIGETEKALEVFHLAPEKNI 302
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLK 374
V+WT MI+GY G + D A L C+ L L G+ IH
Sbjct: 303 VTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC 362
Query: 375 YAAENWHCGQNGG--FTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHH 432
HCG G A+V++YAKCG I A F + K + +N+++ H
Sbjct: 363 LI----HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIAN--KDLVSWNTMLFAFGVH 416
Query: 433 GLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEH 492
GL A+ L++ M G+ PD VTF+ LL C HSGLV+EG FESM Y + +++H
Sbjct: 417 GLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDH 476
Query: 493 YGCVVDLLGRGGLLSEAYHLILN----MPFKANAVIWRALLSACKVHGDVELAKLACQEL 548
C++D+ GRGG L+EA L + +N W LL AC H EL + + L
Sbjct: 477 VTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVL 536
Query: 549 LAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAG 608
E +V+LSN+ + E VR+ + G++K PG S++E+ + F+ G
Sbjct: 537 KIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVG 596
Query: 609 DKSHP 613
D SHP
Sbjct: 597 DSSHP 601
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 121/295 (41%), Gaps = 40/295 (13%)
Query: 281 SVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXX 340
SV+ TS +++ A G + AR++FD M E D V+W M++ YS G
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 341 XXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCG 400
KPD+ A LS CA LG ++ GR+I + C + +++DMY KC
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQ-SLVIRSGFCA-SLPVNNSLIDMYGKCS 119
Query: 401 ---------------------------------SIDTALDVFCKTSKDKKTTILYNSIIS 427
+ ALDVF + K+ +N +IS
Sbjct: 120 DTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMP--KRVAFAWNIMIS 177
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCAC-GHSGLVDEGKKPFESMSTVYGV 486
G AH G + ++LF+EM PD TF +L+ AC S V G+ M G
Sbjct: 178 GHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVM-LKNGW 236
Query: 487 NPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA 541
+ +E V+ + G +A + ++ V W +++ AC G+ E A
Sbjct: 237 SSAVEAKNSVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETEKA 290
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 153/568 (26%), Positives = 270/568 (47%), Gaps = 55/568 (9%)
Query: 67 RLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANAR 126
RLF+ + D+ N+++ + L + + T +LK+CA
Sbjct: 145 RLFNAMPEKDVVTLNSLLHGYIL---NGYAEEALRLFKELNFSADAITLTTVLKACAELE 201
Query: 127 TPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMIN 186
G Q+H ++ + ++L++ Y D A + EQ+ D S + +I+
Sbjct: 202 ALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALIS 261
Query: 187 GFVRAGRAGCS--------------------------MK-----VLGDMRGFGIRPDEYT 215
G+ GR S MK + +MR R D T
Sbjct: 262 GYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRT 320
Query: 216 LVTLLSACSSLEDQRVGRQVH------GLVYRELGCLGDNALLVNALVDMYAKCGCLELA 269
L +++AC L G+Q+H GL+ D+ ++ + L+DMY+KCG A
Sbjct: 321 LAAVINACIGLGFLETGKQMHCHACKFGLI--------DDIVVASTLLDMYSKCGSPMEA 372
Query: 270 ERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGY 329
++ S V + +++ S++ Y S G ++ A+R+F+++ + ++SW +M +G+S G
Sbjct: 373 CKLFSEVESYDTILL--NSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 330 XXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFT 389
+ DEV + + +S CA + +LELG ++ + Q +
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQ--VVS 488
Query: 390 CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG 449
+++D+Y KCG ++ VF + K + +NS+ISG A +G G AI LF++M + G
Sbjct: 489 SSLIDLYCKCGFVEHGRRVF--DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG 546
Query: 450 LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA 509
+ P +TF+ +L AC + GLV+EG+K FESM +G P EH+ C+VDLL R G + EA
Sbjct: 547 IRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEA 606
Query: 510 YHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADM 569
+L+ MPF + +W ++L C +G + K A ++++ +E ++ YV LS + A
Sbjct: 607 INLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATS 666
Query: 570 DQHDEAASVRKAIDNVGIQKPPGWSYVE 597
+ +A VRK + + K PG S+ +
Sbjct: 667 GDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 215/515 (41%), Gaps = 112/515 (21%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSH-VFVANALLHFYCVFRDAHNAYKVFEQMPVR 176
LL+SC++ L Q + L+K F S V VAN LL Y A +F++MP R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDM-------------------------RGFGIRP 211
+ S+N MI G++ +G G S++ M R F P
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 212 DE-----------YTL-----------------------VTLLSACSSLEDQRVGRQVHG 237
++ Y L T+L AC+ LE + G+Q+H
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHA 211
Query: 238 LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
+ +G + ++ + ++LV++YAKCG L +A ++ +R + ++L+S YA+ G
Sbjct: 212 QIL--IGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDD--HSLSALISGYANCG 267
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS 357
V +R LFD+ R V+ W +MISGY A + D + A ++
Sbjct: 268 RVNESRGLFDRKSNRCVILWNSMISGYI-ANNMKMEALVLFNEMRNETREDSRTLAAVIN 326
Query: 358 ECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVV-----DMYAKCGS----------- 401
C LG LE G+++H H + G VV DMY+KCGS
Sbjct: 327 ACIGLGFLETGKQMHC-------HACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV 379
Query: 402 --------------------IDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITL 441
ID A VF + + K+ I +NS+ +G + +G +
Sbjct: 380 ESYDTILLNSMIKVYFSCGRIDDAKRVFERI--ENKSLISWNSMTNGFSQNGCTVETLEY 437
Query: 442 FEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLG 501
F +M L L D V+ +++ AC ++ G++ F + +T+ G++ ++DL
Sbjct: 438 FHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYC 496
Query: 502 RGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
+ G + + M K++ V W +++S +G
Sbjct: 497 KCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 197/474 (41%), Gaps = 79/474 (16%)
Query: 30 LQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSL 89
L++ ++M+ D +ALIS +A R + S LF +N + LWN++I + +
Sbjct: 238 LRMASYMLEQIREPDDHSLSALISGYANCGR-VNESRGLFDRKSNRCVILWNSMISGY-I 295
Query: 90 SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFV 149
+ N T ++ +C G Q+HCH K + V
Sbjct: 296 ANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVV 355
Query: 150 ANALLHFYC----------VFRDAH---------------------NAYKVFEQMPVRDC 178
A+ LL Y +F + +A +VFE++ +
Sbjct: 356 ASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSL 415
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
+S+N M NGF + G +++ M + DE +L +++SAC+S+ +G QV
Sbjct: 416 ISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR 475
Query: 239 VYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGD 298
+ L + ++ ++L+D+Y KCG +E RV + KS W S++S YA+ G
Sbjct: 476 A--TIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMV--KSDEVPWNSMISGYATNGQ 531
Query: 299 VEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSE 358
A LF +M S AG ++P ++ + L+
Sbjct: 532 GFEAIDLFKKM---------------SVAG----------------IRPTQITFMVVLTA 560
Query: 359 CARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT 418
C G +E GR++ ++ F+C +VD+ A+ G ++ A+++ + D
Sbjct: 561 CNYCGLVEEGRKLFESMKVDHGFVPDKEHFSC-MVDLLARAGYVEEAINLVEEMPFDVDG 619
Query: 419 TILYNSIISGLAHHG---LGKYAITLFEEMRLLGLVPDG-VTFVALLCACGHSG 468
+ +++SI+ G +G +GK A +++ L P+ V +V L SG
Sbjct: 620 S-MWSSILRGCVANGYKAMGKKAAE-----KIIELEPENSVAYVQLSAIFATSG 667
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 127/316 (40%), Gaps = 63/316 (19%)
Query: 217 VTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV 276
V LL +CSS + + RQ +GL+ ++ G L ++ N L+ MY++ G + +A + +
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKK-GFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 277 RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXX---- 332
+ +W +++ Y + G+ + R FD M ERD SW ++SG++ AG
Sbjct: 89 PDRNYF--SWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRL 146
Query: 333 ------------------------XXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
D + + L CA L AL+ G
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCG 206
Query: 369 RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSI--------------DTALDVFCK--- 411
++IH + C + ++V++YAKCG + D +L
Sbjct: 207 KQIHAQILIGGVEC--DSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYA 264
Query: 412 ------------TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVA 459
K + IL+NS+ISG + + A+ LF EMR D T A
Sbjct: 265 NCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAA 323
Query: 460 LLCACGHSGLVDEGKK 475
++ AC G ++ GK+
Sbjct: 324 VINACIGLGFLETGKQ 339
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 165/652 (25%), Positives = 298/652 (45%), Gaps = 75/652 (11%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
++ ++ G+ D + T+L+ + L + ++F + DL W+ ++ + +
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGN-LSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
T +++ CA + +H + + F +
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
N+LL Y D ++ ++FE++ ++ VS+ MI+ + R + +++ +M GI
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 211 PDEYTLVTLLSACSSLEDQRVGRQVHGL-------------------VYRELGCLGD--- 248
P+ TL ++LS+C + R G+ VHG +Y E G L D
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 249 --------NALLVNALVDMYAKCG----CLELAERVVSG--------------------- 275
N + N+L+ +YA G L L ++V+
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 276 -----------VRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGY 324
+R S SL+ Y+ G V+ A +F+Q+ R VV+W +M+ G+
Sbjct: 421 VPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGF 480
Query: 325 SHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQ 384
S G ++ +EV +A + C+ +G+LE G+ +H K G
Sbjct: 481 SQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS----GL 536
Query: 385 NGGFT-CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFE 443
FT A++DMYAKCG ++ A VF + ++ + ++S+I+ HG AI+ F
Sbjct: 537 KDLFTDTALIDMYAKCGDLNAAETVF--RAMSSRSIVSWSSMINAYGMHGRIGSAISTFN 594
Query: 444 EMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRG 503
+M G P+ V F+ +L ACGHSG V+EGK F M + +GV+P EH+ C +DLL R
Sbjct: 595 QMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRS 653
Query: 504 GLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLS 563
G L EAY I MPF A+A +W +L++ C++H +++ K +L + D Y +LS
Sbjct: 654 GDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLS 713
Query: 564 NMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEA 615
N+ A+ + +E +R A+ + ++K PG+S +E++ + +F AG+++ +
Sbjct: 714 NIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQT 765
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 217/460 (47%), Gaps = 43/460 (9%)
Query: 19 LASSCRTIQQALQIQAHMVVTG-LHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDL 77
L SC +++ Q+ AH++VTG L D T LI +A L +F PD
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRL-VFEAFPYPDS 65
Query: 78 FLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHL--GLQLH 135
F++ +IK + F FP +L++CA +R HL G ++H
Sbjct: 66 FMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSR-EHLSVGGKVH 124
Query: 136 CHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAG 195
++K + +LL Y + +A KVF+ MPVRD V+++ +++ + G
Sbjct: 125 GRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVV 184
Query: 196 CSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNA 255
++++ M G+ PD T+++++ C+ L R+ R VHG + R++ L + L N+
Sbjct: 185 KALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET--LCNS 242
Query: 256 LVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVV 315
L+ MY+KCG L +ER+ + +V +WT+++S+Y +RG + E+ +
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIAKKNAV--SWTAMISSY-NRG----------EFSEKALR 289
Query: 316 SWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKY 375
S++ MI ++P+ V + + LS C +G + G+ +H +
Sbjct: 290 SFSEMIKS--------------------GIEPNLVTLYSVLSSCGLIGLIREGKSVH-GF 328
Query: 376 AAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLG 435
A + A+V++YA+CG + V S + + +NS+IS AH G+
Sbjct: 329 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS--DRNIVAWNSLISLYAHRGMV 386
Query: 436 KYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKK 475
A+ LF +M + PD T + + AC ++GLV GK+
Sbjct: 387 IQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQ 426
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 172/624 (27%), Positives = 283/624 (45%), Gaps = 74/624 (11%)
Query: 28 QALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH 87
Q Q+Q H+ +GL +++ T+L++ + + + LF + D +WNA+I +
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLY-LKKGCVTSAQMLFDEMPERDTVVWNALICGY 126
Query: 88 SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
S + T LL C G +H KS
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
V NAL+ FY + +A +F +M + VS+N MI + ++G ++ V +M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 208 GIRPDEYTLVTLLSA-------------CSSLEDQRVGRQVHGLV--YRELGCL------ 246
+ T++ LLSA C + D V V LV Y GCL
Sbjct: 247 NVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISV---VTSLVCAYSRCGCLVSAERL 303
Query: 247 -----GDNALLVNALVDMYAKCG---------------CLELAERVVSGVRNG------- 279
D+ + + ++V YA+ G C+++ + G+ +G
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 280 -----------KSVVAAWT----SLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGY 324
KS + T L++ Y+ DVE LF+Q+ E ++SW ++ISG
Sbjct: 364 DIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGC 423
Query: 325 SHAGYXXXXXXXX-XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCG 383
+G + PD + + + L+ C++L L LG+ +H N+
Sbjct: 424 VQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF--- 480
Query: 384 QNGGFTC-AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLF 442
+N F C A++DMYAKCG+ A VF S T +NS+ISG + GL A++ +
Sbjct: 481 ENENFVCTALIDMYAKCGNEVQAESVF--KSIKAPCTATWNSMISGYSLSGLQHRALSCY 538
Query: 443 EEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGR 502
EMR GL PD +TF+ +L AC H G VDEGK F +M +G++P ++HY +V LLGR
Sbjct: 539 LEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGR 598
Query: 503 GGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVML 562
L +EA +LI M K ++ +W ALLSAC +H ++E+ + +++ +++ +G YV++
Sbjct: 599 ACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLM 658
Query: 563 SNMLADMDQHDEAASVRKAIDNVG 586
SN+ A D+ VR + + G
Sbjct: 659 SNLYATEAMWDDVVRVRNMMKDNG 682
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 120/290 (41%), Gaps = 16/290 (5%)
Query: 26 IQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIK 85
I + + + + +GL + LI+ + + + L LF + L WN++I
Sbjct: 363 IDIGMSLHGYAIKSGLCTKTLVVNGLITMY-SKFDDVETVLFLFEQLQETPLISWNSVIS 421
Query: 86 A--HSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
S + AF T LL C+ +LG +LH + +++ F
Sbjct: 422 GCVQSGRASTAFEVFHQMMLTGGLLPDA-ITIASLLAGCSQLCCLNLGKELHGYTLRNNF 480
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
+ FV AL+ Y + A VF+ + ++N MI+G+ +G ++ +
Sbjct: 481 ENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLE 540
Query: 204 MRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELG---CLGDNALLVNALVDMY 260
MR G++PDE T + +LSAC+ G+ + +E G L AL+V L
Sbjct: 541 MREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGR-- 598
Query: 261 AKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVE----VARRLF 306
CL + + K A W +L+SA ++E VAR++F
Sbjct: 599 ---ACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMF 645
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 199/353 (56%), Gaps = 16/353 (4%)
Query: 281 SVVAAWTSLVSAYASRGDVEVARRLFDQMGER-DVVSWTAMISGYSHAGYXXXXXXXXXX 339
+V+ TSLV Y+S GDV+ AR++FD+ E+ ++V WTAMIS Y+
Sbjct: 98 AVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKR 157
Query: 340 XXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKC 399
++ D V V ALS CA LGA+++G I+ + + ++++MY K
Sbjct: 158 MEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKS 217
Query: 400 GSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG------LVPD 453
G + A +F ++ + TT Y S+I G A +G + ++ LF++M+ + + P+
Sbjct: 218 GETEKARKLFDESMRKDVTT--YTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPN 275
Query: 454 GVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLI 513
VTF+ +L AC HSGLV+EGK+ F+SM Y + P+ H+GC+VDL R G L +A+ I
Sbjct: 276 DVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFI 335
Query: 514 LNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHD 573
MP K N VIWR LL AC +HG+VEL + + + ++ DH YV LSN+ A D
Sbjct: 336 NQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWD 395
Query: 574 EAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDIN 626
E + +R D V ++ PG S++E+ +++F++G P+ +LM+ +I+
Sbjct: 396 EKSKMR---DRVRKRRMPGKSWIELGSIINEFVSG----PDNNDEQLMMGEIS 441
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 157/374 (41%), Gaps = 50/374 (13%)
Query: 113 FTFPYLLKSCANARTPHL-GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFE 171
F+ + +K + + L G Q+H + K F++ + + +L+ FY D A +VF+
Sbjct: 65 FSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFD 124
Query: 172 QMPVR-DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQR 230
+ P + + V + MI+ + + ++++ M I D + LSAC+ L +
Sbjct: 125 ETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQ 184
Query: 231 VGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLV 290
+G +++ + L + L N+L++MY K G
Sbjct: 185 MGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSG-------------------------- 218
Query: 291 SAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXX------XXXXXXXXXXXXX 344
+ E AR+LFD+ +DV ++T+MI GY+ G
Sbjct: 219 -------ETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTV 271
Query: 345 MKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDT 404
+ P++V + L C+ G +E G+R H K +++ +VD++ + G +
Sbjct: 272 ITPNDVTFIGVLMACSHSGLVEEGKR-HFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 405 ALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM--RLLGLVPDGV-TFVALL 461
A + F K T+++ +++ + HG + L EE+ R+ L D V +VAL
Sbjct: 331 AHE-FINQMPIKPNTVIWRTLLGACSLHG----NVELGEEVQRRIFELDRDHVGDYVALS 385
Query: 462 CACGHSGLVDEGKK 475
G+ DE K
Sbjct: 386 NIYASKGMWDEKSK 399
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 177/682 (25%), Positives = 296/682 (43%), Gaps = 127/682 (18%)
Query: 44 DLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXX 103
D+F+ T L+S +A + + ++F + +LF W+A+I A+S
Sbjct: 114 DVFVETKLLSMYAKCG-CIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 104 XXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDA 163
F FP +L+ CAN G +H ++K S + V+N++L Y +
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 232
Query: 164 HNAYKVFEQMPVRDC-----------------------------------VSYNMMINGF 188
A K F +M RD V++N++I G+
Sbjct: 233 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 189 VRAGRAGCSMKVLGDMRGFGIR-----------------------------------PDE 213
+ G+ +M ++ M FGI P+
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 214 YTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVV 273
T+++ +SACS L+ G +VH + + +G + D+ L+ N+LVDMY+KCG LE A +V
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVK-MGFI-DDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 274 SGVRN-------------------GKSV--------------VAAWTSLVSAYASRGDVE 300
V+N GK+ + W +++S Y GD
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEG 470
Query: 301 VARRLFDQMG-----ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAA 355
A LF +M +R+ +W +I+GY G P+ V +++
Sbjct: 471 EAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSL 530
Query: 356 LSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
L CA L ++ R IH L+ + H +N A+ D YAK G I+ + +F
Sbjct: 531 LPACANLLGAKMVREIHGCVLRRNLDAIHAVKN-----ALTDTYAKSGDIEYSRTIF--L 583
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
+ K I +NS+I G HG A+ LF +M+ G+ P+ T +++ A G G VDE
Sbjct: 584 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDE 643
Query: 473 GKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSAC 532
GKK F S++ Y + P +EH +V L GR L EA I M ++ IW + L+ C
Sbjct: 644 GKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGC 703
Query: 533 KVHGDVELAKLACQELLAVEHDHGARYVMLSNML---ADMDQHDEAASVRKAIDNVGIQK 589
++HGD+++A A + L ++E ++ A ++S + A + + E R+ DN+ ++K
Sbjct: 704 RIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRR--DNL-LKK 760
Query: 590 PPGWSYVEMNGALHKFLAGDKS 611
P G S++E+ +H F GD+S
Sbjct: 761 PLGQSWIEVRNLIHTFTTGDQS 782
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 197/473 (41%), Gaps = 75/473 (15%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRF----HSHVFVANALLHFYCVFRDAHNAYKV 169
T+ LL+SC ++ + HLG LH +RF VFV LL Y +A KV
Sbjct: 83 TYLKLLESCIDSGSIHLGRILH-----ARFGLFTEPDVFVETKLLSMYAKCGCIADARKV 137
Query: 170 FEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQ 229
F+ M R+ +++ MI + R R K+ M G+ PD++ +L C++ D
Sbjct: 138 FDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDV 197
Query: 230 RVGRQVHGLVYRELGCLGDNALL--VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWT 287
G+ +H +V + LG ++ L N+++ +YAKCG L+ A + +R + V AW
Sbjct: 198 EAGKVIHSVVIK----LGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR--ERDVIAWN 251
Query: 288 SLVSAYASRGDVEVARRL----------------------FDQMGE-------------- 311
S++ AY G E A L ++Q+G+
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETF 311
Query: 312 ---RDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
DV +WTAMISG H G + P+ V +++A+S C+ L + G
Sbjct: 312 GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG 371
Query: 369 RRIHLKYAAENWHCGQNGGFT------CAVVDMYAKCGSIDTALDVFCKTSKDKKTTILY 422
+H GF ++VDMY+KCG ++ A VF S K +
Sbjct: 372 SEVH--------SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF--DSVKNKDVYTW 421
Query: 423 NSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMST 482
NS+I+G G A LF M+ L P+ +T+ ++ +G E F+ M
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Query: 483 VYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFK---ANAVIWRALLSAC 532
V + ++ + G EA L M F N+V +LL AC
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/632 (26%), Positives = 281/632 (44%), Gaps = 56/632 (8%)
Query: 13 DRVKALLA--SSCRTIQQALQIQAHMVVTGLH---HDLFLSTALISFFATNHRALRHSLR 67
DR+ LL ++ ++ I AH++VT D + +LI+ + +R + +
Sbjct: 32 DRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR-ARK 90
Query: 68 LFSLVTNPDLFLWNAIIKAHSLSP-NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANAR 126
LF L+ ++ W A++K + S + F + KSC+N+
Sbjct: 91 LFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG 150
Query: 127 TPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMIN 186
G Q H +K SH FV N L++ Y + A +V + +P D ++ ++
Sbjct: 151 RIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALS 210
Query: 187 GFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCL 246
G++ G + VL + T ++ L S+L D + QVH + R
Sbjct: 211 GYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR----F 266
Query: 247 GDNALL--VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARR 304
G NA + AL++MY KCG + A+RV + T+++ AY E A
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN--TTIMDAYFQDKSFEEALN 324
Query: 305 LFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGA 364
LF +M ++V P+E L+ A L
Sbjct: 325 LFSKMDTKEV-------------------------------PPNEYTFAILLNSIAELSL 353
Query: 365 LELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTIL 421
L+ G +H LK N N A+V+MYAK GSI+ A F + + +
Sbjct: 354 LKQGDLLHGLVLKSGYRNHVMVGN-----ALVNMYAKSGSIEDARKAF--SGMTFRDIVT 406
Query: 422 YNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMS 481
+N++ISG +HHGLG+ A+ F+ M G +P+ +TF+ +L AC H G V++G F +
Sbjct: 407 WNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLM 466
Query: 482 TVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA 541
+ V P ++HY C+V LL + G+ +A + P + + V WR LL+AC V + L
Sbjct: 467 KKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLG 526
Query: 542 KLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGA 601
K + + + YV+LSN+ A + + A VR ++N G++K PG S++ +
Sbjct: 527 KKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQ 586
Query: 602 LHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
H FLA D HPE ++++ +K +G
Sbjct: 587 THVFLAEDNQHPEITLIYAKVKEVMSKIKPLG 618
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 197/347 (56%), Gaps = 8/347 (2%)
Query: 287 TSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK 346
T+L+ AY+ GD+ A +LFD+M RDV SW A+I+G ++
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 347 PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
EV VVAAL C+ LG ++ G I Y+ +N A +DMY+KCG +D A
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSN------AAIDMYSKCGFVDKAY 261
Query: 407 DVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGH 466
VF + KK+ + +N++I+G A HG A+ +F+++ G+ PD V+++A L AC H
Sbjct: 262 QVF-EQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRH 320
Query: 467 SGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWR 526
+GLV+ G F +M+ GV M+HYGCVVDLL R G L EA+ +I +M + V+W+
Sbjct: 321 AGLVEYGLSVFNNMAC-KGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQ 379
Query: 527 ALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVG 586
+LL A +++ DVE+A++A +E+ + ++ +V+LSN+ A + + VR +++
Sbjct: 380 SLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQ 439
Query: 587 IQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
++K PG SY+E G +H+F DKSH + + + +I ++ G
Sbjct: 440 VKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDG 486
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 196/450 (43%), Gaps = 51/450 (11%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRA-LRHSLRLFSLVTNPDL 77
+ C + Q Q+Q+H + G FL + L+ A + L ++++F + P
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLT 68
Query: 78 FLWNAIIK--AHSLSPNHAFXXXXXXXXXXXXXXXX----XFTFPYLLKSCANARTPHLG 131
WNAII+ A S P+ AF T + LK+CA A
Sbjct: 69 NDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRA 191
QLHC + + + + LL Y D +AYK+F++MPVRD S+N +I G V
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSG 188
Query: 192 GRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQV-HGLVYRELGCLGDNA 250
RA +M++ M GIR E T+V L ACS L D + G + HG DN
Sbjct: 189 NRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-------NDNV 241
Query: 251 LLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG 310
++ NA +DMY+KCG ++ A +V KSVV W ++++ +A G+ A +FD++
Sbjct: 242 IVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVV-TWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 311 ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR 370
+ + KPD+V +AAL+ C G +E G
Sbjct: 301 DNGI-------------------------------KPDDVSYLAALTACRHAGLVEYGLS 329
Query: 371 IHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLA 430
+ A + +N VVD+ ++ G + A D+ C S +L+ S++
Sbjct: 330 VFNNMACKG--VERNMKHYGCVVDLLSRAGRLREAHDIICSMSM-IPDPVLWQSLLGASE 386
Query: 431 HHGLGKYAITLFEEMRLLGLVPDGVTFVAL 460
+ + A E++ +G+ DG FV L
Sbjct: 387 IYSDVEMAEIASREIKEMGVNNDG-DFVLL 415
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 17/252 (6%)
Query: 297 GDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAAL 356
GD+ A ++F + + W A+I G++ + + + V AL
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 357 SECARLGALELGRRIHLKYAAENWHCGQN------GGFTC-AVVDMYAKCGSIDTALDVF 409
+ L A R A + HC N C ++D Y+K G + +A +F
Sbjct: 111 TCSFTLKACA---RALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+ + +N++I+GL A+ L++ M G+ VT VA L AC H G
Sbjct: 168 DEMP--VRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
V EG+ F S N + +D+ + G + +AY + K + V W ++
Sbjct: 226 VKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
Query: 530 SACKVHGDVELA 541
+ VHG+ A
Sbjct: 281 TGFAVHGEAHRA 292
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/573 (27%), Positives = 270/573 (47%), Gaps = 56/573 (9%)
Query: 28 QALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH 87
+ + I + V GL D+ ++T+L+S ++ L + +LF + + D+ W+A+I ++
Sbjct: 318 KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGE-LEIAEQLFINIEDRDVVSWSAMIASY 376
Query: 88 SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
+ H T +L+ CA LG +HC+ +K+ S +
Sbjct: 377 EQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESEL 436
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
A A++ Y A K FE++P++D V++N + G+ + G A + V +M+
Sbjct: 437 ETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH 496
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
G+ PD T+V +L C+ D G V+G + + + +AL++M+ KC L
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKH--GFDSECHVAHALINMFTKCDAL- 553
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG-ERDVVSWTAMISGYSH 326
A +V LFD+ G E+ VSW M++GY
Sbjct: 554 -AAAIV-------------------------------LFDKCGFEKSTVSWNIMMNGYLL 581
Query: 327 AGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNG 386
G +P+ V V + A L AL +G +H + C Q
Sbjct: 582 HGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF-CSQTP 640
Query: 387 GFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR 446
++VDMYAKCG I+++ F + S K + +N+++S A HGL A++LF M+
Sbjct: 641 -VGNSLVDMYAKCGMIESSEKCFIEISN--KYIVSWNTMLSAYAAHGLASCAVSLFLSMQ 697
Query: 447 LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLL 506
L PD V+F+++L AC H+GLV+EGK+ FE M + + ++EHY C+VDLLG+ GL
Sbjct: 698 ENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLF 757
Query: 507 SEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNML 566
EA ++ M K + +W ALL++ ++H ++ L+ A +L+ +E + + Y +
Sbjct: 758 GEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQDRRL- 816
Query: 567 ADMDQHDEAASVRKAIDNVG-IQKPPGWSYVEM 598
++NV I+K P S++E+
Sbjct: 817 -------------GEVNNVSRIKKVPACSWIEV 836
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 233/530 (43%), Gaps = 59/530 (11%)
Query: 18 LLASSCRTIQQALQIQAHMVVTGL--HHDLFLSTALISFFATNHRALRHSLR--LFSLVT 73
L+ C+ + LQ+ ++V+GL H+ L + +L R L +F V
Sbjct: 10 LMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQ---------RQDLSRVIFDSVR 60
Query: 74 NPDLFLWNAIIKAHSLSPNH-AFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGL 132
+P + LWN++I+ ++ + H ++F + LK+CA + GL
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG 192
++H + + S V++ AL+ YC RD +A +VF++M V+D V++N M++G + G
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 193 RAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALL 252
+ ++ + DMR + D +L L+ A S LE V R +HGLV ++ G
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK----GFIFAF 236
Query: 253 VNALVDMYAKCGCLELAERVVSGV-RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE 311
+ L+DMY C L AE V V R +S +W ++++AYA G E LFD M
Sbjct: 237 SSGLIDMYCNCADLYAAESVFEEVWRKDES---SWGTMMAAYAHNGFFEEVLELFDLMRN 293
Query: 312 RDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRI 371
DV + ++V +AL A +G L G I
Sbjct: 294 YDV-------------------------------RMNKVAAASALQAAAYVGDLVKGIAI 322
Query: 372 HLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAH 431
H YA + G T +++ MY+KCG ++ A +F + + + ++++I+
Sbjct: 323 H-DYAVQQGLIGDVSVAT-SLMSMYSKCGELEIAEQLFINI--EDRDVVSWSAMIASYEQ 378
Query: 432 HGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQME 491
G AI+LF +M + + P+ VT ++L C G K + + ++E
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG-KSIHCYAIKADIESELE 437
Query: 492 HYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA 541
V+ + + G S A +P K +AV + AL GD A
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNALAQGYTQIGDANKA 486
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 241/504 (47%), Gaps = 39/504 (7%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
T +L C + +H + S + + V N L+ Y + + VF+ M
Sbjct: 157 TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGM 216
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
R+ ++ +I+G + +++ MR + P+ T ++ L+ACS + G+
Sbjct: 217 SHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQ 276
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
Q+H L+++ + + +AL+DMY+KCG +E AWT
Sbjct: 277 QIHALLWKY--GIESELCIESALMDMYSKCGSIE----------------DAWT------ 312
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
+F+ E D VS T ++ G + G ++ D V
Sbjct: 313 -----------IFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVS 361
Query: 354 AALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTS 413
A L +L LG+++H + N +++MY+KCG + + VF +
Sbjct: 362 AVLGVSFIDNSLGLGKQLHSLVIKRKF--SGNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
K + + +NS+I+ A HG G A+ L+EEM L + P VTF++LL AC H GL+D+G
Sbjct: 420 K--RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKG 477
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
++ M V+G+ P+ EHY C++D+LGR GLL EA I ++P K + IW+ALL AC
Sbjct: 478 RELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACS 537
Query: 534 VHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGW 593
HGD E+ + A ++L D + +++++N+ + + E A K + +G+ K G
Sbjct: 538 FHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGI 597
Query: 594 SYVEMNGALHKFLAGDKSHPEAKA 617
S +E+ H F+ DK HP+A+A
Sbjct: 598 SSIEIEHKTHSFVVEDKLHPQAEA 621
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 182/422 (43%), Gaps = 58/422 (13%)
Query: 128 PHLGLQLHCHLVK---------SRFHSHVFVA-NALLHFYCVFRDAHNAYKVFEQMPVRD 177
PHLG LH ++K + H + V N+LL Y +A K+F++MP+RD
Sbjct: 61 PHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRD 120
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
+S N++ GF+R +L M G G D TL +LS C + E V + +H
Sbjct: 121 VISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHA 179
Query: 238 LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
L L + N L+ Y KCGC VSG
Sbjct: 180 LAI--LSGYDKEISVGNKLITSYFKCGC------SVSG---------------------- 209
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS 357
R +FD M R+V++ TA+ISG + P+ V ++AL+
Sbjct: 210 -----RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 358 ECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSK 414
C+ + G++IH KY E+ C ++ A++DMY+KCGSI+ A +F T++
Sbjct: 265 ACSGSQRIVEGQQIHALLWKYGIESELCIES-----ALMDMYSKCGSIEDAWTIFESTTE 319
Query: 415 DKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
+ ++ I+ GLA +G + AI F M G+ D A+L + GK
Sbjct: 320 VDEVSM--TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGK 377
Query: 475 KPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKV 534
+ S+ + ++++ + G L+++ + MP K N V W ++++A
Sbjct: 378 Q-LHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFAR 435
Query: 535 HG 536
HG
Sbjct: 436 HG 437
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 274/587 (46%), Gaps = 44/587 (7%)
Query: 15 VKALLASSCRTIQ-QALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVT 73
+KAL S + ++ Q L I + + G +L L LI + ++H+ +LF ++
Sbjct: 16 LKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLY-LKQGDVKHARKLFDRIS 74
Query: 74 NPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQ 133
D+ W A+I S H FT+ +LKSC + G+Q
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGR 193
+H + K ++ V +ALL Y A F+ M RD VS+N MI+G+
Sbjct: 135 IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
Query: 194 AGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLV 253
A S + M G +PD +T +LL A ++ + ++HGL + LG G ++ L+
Sbjct: 195 ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIK-LG-FGRSSALI 252
Query: 254 NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD 313
+LV+ Y KCG S+ AW +L + +RD
Sbjct: 253 RSLVNAYVKCG----------------SLANAW-----------------KLHEGTKKRD 279
Query: 314 VVSWTAMISGYSHAGY-XXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH 372
++S TA+I+G+S K DEV V + L C + ++ +GR+IH
Sbjct: 280 LLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIH 339
Query: 373 LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHH 432
+A ++ + +++DMYAK G I+ A+ F +K + S+I+G H
Sbjct: 340 -GFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF--EEMKEKDVRSWTSLIAGYGRH 396
Query: 433 GLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEH 492
G + AI L+ M + P+ VTF++LL AC H+G + G K +++M +G+ + EH
Sbjct: 397 GNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEH 456
Query: 493 YGCVVDLLGRGGLLSEAYHLILNMP--FKANAVIWRALLSACKVHGDVELAKLACQELLA 550
C++D+L R G L EAY LI + ++ W A L AC+ HG+V+L+K+A +LL+
Sbjct: 457 LSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLS 516
Query: 551 VEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVG-IQKPPGWSYV 596
+E Y+ L+++ A D A + RK + G K PG+S V
Sbjct: 517 MEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 156/517 (30%), Positives = 246/517 (47%), Gaps = 21/517 (4%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFA---TNHRALRHSLRLFSLVTNPDL 77
S + + + Q+ GL ++ + +LIS + H A R +F + D+
Sbjct: 226 SCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAER----MFQDAGSWDI 281
Query: 78 FLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCH 137
WNAII A + S N T+ +L + + G Q+H
Sbjct: 282 VSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGM 341
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCS 197
L+K+ + + + NAL+ FY + ++ F+ + ++ V +N +++G+ C
Sbjct: 342 LIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPIC- 400
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALV 257
+ + M G RP EYT T L +C E Q Q+H ++ R +G DN ++++L+
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCCVTELQ----QLHSVIVR-MG-YEDNDYVLSSLM 454
Query: 258 DMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSW 317
YAK + A ++ +G + V + Y+ RG + +L + + D VSW
Sbjct: 455 RSYAKNQLMNDALLLLDWA-SGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSW 513
Query: 318 TAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAA 377
I+ S + Y ++PD+ V+ LS C++L L LG IH
Sbjct: 514 NIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITK 573
Query: 378 ENWHCGQNGGFTCAV-VDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGK 436
++ C F C V +DMY KCGSI + + VF +T + K I + ++IS L HG G+
Sbjct: 574 TDFSCADT--FVCNVLIDMYGKCGSIRSVMKVFEETRE--KNLITWTALISCLGIHGYGQ 629
Query: 437 YAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCV 496
A+ F+E LG PD V+F+++L AC H G+V EG F+ M YGV P+M+HY C
Sbjct: 630 EALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCA 688
Query: 497 VDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
VDLL R G L EA HLI MPF A+A +WR L C
Sbjct: 689 VDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 156/385 (40%), Gaps = 42/385 (10%)
Query: 147 VFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
V+V N ++ Y + A KVF+QMP R+ VS+N +I G+ + G + V +MR
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCL 266
FG P++ T+ LLS C+SL D R G Q+HGL + G +A + L+ +Y + L
Sbjct: 109 FGYLPNQSTVSGLLS-CASL-DVRAGTQLHGLSLK-YGLFMADAFVGTCLLCLYGRLDLL 165
Query: 267 ELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSH 326
E+AE+V F+ M + + +W M+S H
Sbjct: 166 EMAEQV---------------------------------FEDMPFKSLETWNHMMSLLGH 192
Query: 327 AGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNG 386
G+ E + L + + L++ +++H + C
Sbjct: 193 RGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDC--EI 250
Query: 387 GFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR 446
+++ Y KCG+ A +F + +N+II A A+ LF M
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMF--QDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 447 LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLL 506
G P+ T+V++L L+ G++ M G + ++D + G L
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQ-IHGMLIKNGCETGIVLGNALIDFYAKCGNL 367
Query: 507 SEAYHLILNMPFKANAVIWRALLSA 531
++ L + N V W ALLS
Sbjct: 368 EDS-RLCFDYIRDKNIVCWNALLSG 391
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 185/457 (40%), Gaps = 81/457 (17%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
+F +LK + + + QLHC K + V N+L+ Y + H A ++F+
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA 276
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
D VS+N +I ++ ++K+ M G P++ T V++L S ++ GR
Sbjct: 277 GSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
Q+HG++ + GC +L NAL+D YAKCG LE + +R+ + W +L+S Y
Sbjct: 337 QIHGMLIKN-GC-ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKN--IVCWNALLSGY 392
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
A++ D + LF QM + +P E
Sbjct: 393 ANK-DGPICLSLFLQMLQ-------------------------------MGFRPTEYTFS 420
Query: 354 AALSEC------------ARLG------ALELGRRIHLKYAAEN-------WHCGQNGGF 388
AL C R+G L R + K N W G
Sbjct: 421 TALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 389 TCAVV-DMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRL 447
+V +Y++ G ++ + ++ ++ T+ +N I+ + + I LF+ M
Sbjct: 481 PLNIVAGIYSRRGQYHESVKLI--STLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 448 LGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGC--------VVDL 499
+ PD TFV++L C S L D S+++G+ + + + C ++D+
Sbjct: 539 SNIRPDKYTFVSILSLC--SKLCD-----LTLGSSIHGLITKTD-FSCADTFVCNVLIDM 590
Query: 500 LGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
G+ G + + + N + W AL+S +HG
Sbjct: 591 YGKCGSIRSVMK-VFEETREKNLITWTALISCLGIHG 626
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 266/505 (52%), Gaps = 28/505 (5%)
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGD 203
+V A++ Y + A +F++MP R+ VS+N MI+G+ ++GR ++++ +
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 204 MRGFGIRPDEYTLVTLLSACSSLED-----QRVGRQ--------VHGLV--------YRE 242
M I ++V L +++ +R+ R+ V GL R
Sbjct: 166 MPERNI-VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRL 224
Query: 243 LGCLGD-NALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEV 301
C+ + N + NA++ YA+ ++ A+++ + + A+W ++++ + ++
Sbjct: 225 FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM--PERDFASWNTMITGFIRNREMNK 282
Query: 302 ARRLFDQMGERDVVSWTAMISGY-SHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECA 360
A LFD+M E++V+SWT MI+GY + +KP+ V+ LS C+
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 361 RLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTI 420
L L G++IH + +++ H +N T A+++MY+K G + A +F ++ I
Sbjct: 343 DLAGLVEGQQIH-QLISKSVH-QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLI 400
Query: 421 LYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM 480
+NS+I+ AHHG GK AI ++ +MR G P VT++ LL AC H+GLV++G + F+ +
Sbjct: 401 SWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDL 460
Query: 481 STVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVEL 540
+ + EHY C+VDL GR G L + + I + + + A+LSAC VH +V +
Sbjct: 461 VRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSI 520
Query: 541 AKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNG 600
AK +++L D YV++SN+ A + +EAA +R + G++K PG S+V++
Sbjct: 521 AKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGK 580
Query: 601 ALHKFLAGDKSHPEAKATELMLRDI 625
H F+ GDKSHP+ +A + +L D+
Sbjct: 581 QNHLFVVGDKSHPQFEALDSILSDL 605
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 170/380 (44%), Gaps = 40/380 (10%)
Query: 166 AYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM---RGFGIRPDEYTLVTLLSA 222
A K+F+ +P RD V++ +I G+++ LGDM R R D V +A
Sbjct: 65 ARKLFDGLPERDVVTWTHVITGYIK----------LGDMREARELFDRVDSRKNVVTWTA 114
Query: 223 CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV--RNGK 280
S + + ++++E+ N + N ++D YA+ G ++ A + + RN
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMP--ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN-- 170
Query: 281 SVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXX 340
+ +W S+V A RG ++ A LF++M RDVVSWTAM+ G + G
Sbjct: 171 --IVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 341 XXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCG 400
+ ++ ++ R+ + ++ + +W+ G +M CG
Sbjct: 229 PERNIISWNA-MITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNR--EMNKACG 285
Query: 401 SIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLV-PDGVTFVA 459
D +K I + ++I+G + + A+ +F +M G V P+ T+V+
Sbjct: 286 LFDRM---------PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 460 LLCACGH-SGLVDEGKKPFESMS-TVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILN-M 516
+L AC +GLV EG++ + +S +V+ N + ++++ + G L A + N +
Sbjct: 337 ILSACSDLAGLV-EGQQIHQLISKSVHQKNEIV--TSALLNMYSKSGELIAARKMFDNGL 393
Query: 517 PFKANAVIWRALLSACKVHG 536
+ + + W ++++ HG
Sbjct: 394 VCQRDLISWNSMIAVYAHHG 413
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 4/186 (2%)
Query: 42 HHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAH-SLSPNHAFXXXXX 100
D +I+ F N R + + LF + ++ W +I + N
Sbjct: 261 ERDFASWNTMITGFIRN-REMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFS 319
Query: 101 XXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVF 160
T+ +L +C++ G Q+H + KS + V +ALL+ Y
Sbjct: 320 KMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKS 379
Query: 161 RDAHNAYKVFEQMPV--RDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVT 218
+ A K+F+ V RD +S+N MI + G ++++ MR G +P T +
Sbjct: 380 GELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLN 439
Query: 219 LLSACS 224
LL ACS
Sbjct: 440 LLFACS 445
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 247/497 (49%), Gaps = 39/497 (7%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
T+ L+++C ++ +++ ++ + F ++ N +L + +A ++F+++
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
P R+ SY +I+GFV G + ++ M + +T +L A + L VG+
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
Q+H + LG + DN + L+DMY+KCG
Sbjct: 245 QLHVCALK-LGVV-DNTFVSCGLIDMYSKCG----------------------------- 273
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
D+E AR F+ M E+ V+W +I+GY+ GY + D+ +
Sbjct: 274 ----DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLS 329
Query: 354 AALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTS 413
+ +L LEL ++ H + A+VD Y+K G +DTA VF K
Sbjct: 330 IMIRISTKLAKLELTKQAHASLIRNGFESEIVA--NTALVDFYSKWGRVDTARYVFDKLP 387
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
+ K I +N+++ G A+HG G A+ LFE+M + P+ VTF+A+L AC +SGL ++G
Sbjct: 388 R--KNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQG 445
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
+ F SMS V+G+ P+ HY C+++LLGR GLL EA I P K +W ALL+AC+
Sbjct: 446 WEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACR 505
Query: 534 VHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGW 593
+ ++EL ++ ++L + + YV++ NM M + EAA V + +++ G+ P
Sbjct: 506 MQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPAC 565
Query: 594 SYVEMNGALHKFLAGDK 610
++VE+ H FL+GD+
Sbjct: 566 TWVEVGDQTHSFLSGDR 582
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 130/296 (43%), Gaps = 14/296 (4%)
Query: 40 GLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXX 99
G+ + F+S LI ++ + + F + WN +I ++L
Sbjct: 254 GVVDNTFVSCGLIDMYSKCG-DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCL 312
Query: 100 XXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCV 159
FT +++ L Q H L+++ F S + AL+ FY
Sbjct: 313 LYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSK 372
Query: 160 FRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTL 219
+ A VF+++P ++ +S+N ++ G+ GR ++K+ M + P+ T + +
Sbjct: 373 WGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAV 432
Query: 220 LSAC--SSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR 277
LSAC S L +Q G ++ L E+ + A+ ++++ + G L+ A ++ +R
Sbjct: 433 LSACAYSGLSEQ--GWEIF-LSMSEVHGIKPRAMHYACMIELLGRDGLLDEA---IAFIR 486
Query: 278 NG--KSVVAAWTSLVSAYASRGDVEVARRLFDQ---MGERDVVSWTAMISGYSHAG 328
K+ V W +L++A + ++E+ R + ++ MG + ++ M + Y+ G
Sbjct: 487 RAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMG 542
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 176/325 (54%), Gaps = 6/325 (1%)
Query: 289 LVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPD 348
L+ YA GD++ A LF + RD++ W AMISGY G + PD
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 349 EVDVVAALSECARLGALELGRRIHLKYAAENWHC-GQNGGFTCAVVDMYAKCGSIDTALD 407
+ + C+ L LE G+R H A C N A+VDMY KC S
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAH---AVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHR 265
Query: 408 VFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHS 467
VF + S + I + S+ISG +HG + FE+M+ G P+ VTF+ +L AC H
Sbjct: 266 VFDQLST--RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHG 323
Query: 468 GLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRA 527
GLVD+G + F SM YG+ P+ +HY +VD LGR G L EAY ++ P K + +W +
Sbjct: 324 GLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGS 383
Query: 528 LLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGI 587
LL AC++HG+V+L +LA + L ++ +G YV+ +N A + A+ VR+ ++N G+
Sbjct: 384 LLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGV 443
Query: 588 QKPPGWSYVEMNGALHKFLAGDKSH 612
+K PG+S +E+ G +H+F+ D SH
Sbjct: 444 KKDPGYSQIELQGEVHRFMKDDTSH 468
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 142/337 (42%), Gaps = 44/337 (13%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
T+ LL+ C + G ++H + F + ++ LL Y + D A +F +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
+RD + +N MI+G+V+ G + + DMR I PD+YT ++ ACS+L+ G+
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVS--GVRNGKSVVAAWTSLVS 291
+ H ++ + C+ N ++ +ALVDMY KC RV RN V WTSL+S
Sbjct: 230 RAHAVMIKR--CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRN----VITWTSLIS 283
Query: 292 AYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVD 351
Y G V + F++M E +P+ V
Sbjct: 284 GYGYHGKVSEVLKCFEKMKEEGC-------------------------------RPNPVT 312
Query: 352 VVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK 411
+ L+ C G ++ G H ++ G A+VD + G + A + F
Sbjct: 313 FLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYE-FVM 370
Query: 412 TSKDKKTTILYNSIISGLAHHG---LGKYAITLFEEM 445
S K+ ++ S++ HG L + A T F E+
Sbjct: 371 KSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLEL 407
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 13/320 (4%)
Query: 17 ALLASSCRTIQQ---ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVT 73
A+L C+ ++ +I A M V G + +L L+ +A + L+ + LF +
Sbjct: 112 AVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSG-DLQTAGILFRSLK 170
Query: 74 NPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQ 133
DL WNA+I + +TF + ++C+ G +
Sbjct: 171 IRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKR 230
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGR 193
H ++K S++ V +AL+ Y + ++VF+Q+ R+ +++ +I+G+ G+
Sbjct: 231 AHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 290
Query: 194 AGCSMKVLGDMRGFGIRPDEYTLVTLLSACS--SLEDQRVGRQVHGLVYRELGCLGDNAL 251
+K M+ G RP+ T + +L+AC+ L D+ G + + R+ G +
Sbjct: 291 VSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK--GWEHFYSMKRDYG-IEPEGQ 347
Query: 252 LVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDV---EVARRLFDQ 308
A+VD + G L+ A V K W SL+ A G+V E+A F +
Sbjct: 348 HYAAMVDTLGRAGRLQEAYEFVMK-SPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLE 406
Query: 309 MGERDVVSWTAMISGYSHAG 328
+ + ++ +GY+ G
Sbjct: 407 LDPTNGGNYVVFANGYASCG 426
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/497 (29%), Positives = 242/497 (48%), Gaps = 47/497 (9%)
Query: 118 LLKSCANARTPHLGLQLHCHLV--KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPV 175
LL +C +A++ H G+++ C L+ + + + L+ + V R A K+F+ +
Sbjct: 137 LLHACISAKSLHHGIKI-CSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTD 195
Query: 176 RDCVS---YNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
++ + M G+ R G ++ V DM I P +++ L AC L+D RVG
Sbjct: 196 SSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVG 255
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
R +H + + E ++VV V L+
Sbjct: 256 RGIHAQIVKRK-----------------------EKVDQVVYNV------------LLKL 280
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
Y G + AR++FD M ER+VV+W ++IS S + +
Sbjct: 281 YMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATL 340
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF-CK 411
L C+R+ AL G+ IH + + +++DMY KCG ++ + VF
Sbjct: 341 TTILPACSRVAALLTGKEIHAQILKSKEK--PDVPLLNSLMDMYGKCGEVEYSRRVFDVM 398
Query: 412 TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVD 471
+KD + +N +++ A +G + I LFE M G+ PDG+TFVALL C +GL +
Sbjct: 399 LTKDLAS---WNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTE 455
Query: 472 EGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA 531
G FE M T + V+P +EHY C+VD+LGR G + EA +I MPFK +A IW +LL++
Sbjct: 456 YGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS 515
Query: 532 CKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPP 591
C++HG+V + ++A +EL +E + YVM+SN+ AD D +R+ + G++K
Sbjct: 516 CRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEA 575
Query: 592 GWSYVEMNGALHKFLAG 608
G S+V++ + F+AG
Sbjct: 576 GCSWVQVKDKIQIFVAG 592
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 164/396 (41%), Gaps = 41/396 (10%)
Query: 41 LHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLF---LWNAIIKAHSLSPNHAFXX 97
L H+ L + LI+ F+ R L + ++F VT+ L +W A+ +S + +
Sbjct: 163 LRHNPKLLSKLITLFSVCRR-LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDAL 221
Query: 98 XXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFY 157
F+ LK+C + + +G +H +VK + V N LL Y
Sbjct: 222 IVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLY 281
Query: 158 CVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLV 217
+A KVF+ M R+ V++N +I+ + R + M+ I TL
Sbjct: 282 MESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLT 341
Query: 218 TLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR 277
T+L ACS + G+++H + + + L+N+L+DMY KCG +E + RV +
Sbjct: 342 TILPACSRVAALLTGKEIHAQILKSKE--KPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 278 NGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXX 337
+A+W +++ YA G++E LF+ M E V
Sbjct: 400 TKD--LASWNIMLNCYAINGNIEEVINLFEWMIESGVA---------------------- 435
Query: 338 XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYA 397
PD + VA LS C+ G E G + + E + C +VD+
Sbjct: 436 ---------PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYAC-LVDILG 485
Query: 398 KCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG 433
+ G I A+ V +T K + ++ S+++ HG
Sbjct: 486 RAGKIKEAVKVI-ETMPFKPSASIWGSLLNSCRLHG 520
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
T +L +C+ G ++H ++KS+ V + N+L+ Y + + +VF+ M
Sbjct: 339 TLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM 398
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
+D S+N+M+N + G + + M G+ PD T V LLS CS G
Sbjct: 399 LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGL 458
Query: 234 QVHGLVYRELGCLGDNALLVNA-LVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
+ + E AL A LVD+ + G ++ A +V+ + K + W SL+++
Sbjct: 459 SLFERMKTEFRV--SPALEHYACLVDILGRAGKIKEAVKVIETM-PFKPSASIWGSLLNS 515
Query: 293 YASRGDVEV----ARRLF 306
G+V V A+ LF
Sbjct: 516 CRLHGNVSVGEIAAKELF 533
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 244/485 (50%), Gaps = 21/485 (4%)
Query: 116 PYLLKSCANARTPH--LGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
P +L++CA P LG LH +K S V V ++L+ Y +A KVF++M
Sbjct: 49 PLILRACACV-VPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEM 107
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
P R+ ++N MI G++ G A + + ++ + + T + ++ + R
Sbjct: 108 PERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKAR 164
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
++ + EL N + ++ +Y +E A + + + V W+ ++S Y
Sbjct: 165 ELFERMPFEL----KNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFV--WSLMMSGY 218
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
GDV AR +F ++ RD+V W +I+GY+ GY +PD V V
Sbjct: 219 FRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVS 278
Query: 354 AALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTS 413
+ LS CA+ G L++GR +H Q + A++DMYAKCG ++ A VF S
Sbjct: 279 SILSACAQSGRLDVGREVHSLINHRGIELNQF--VSNALIDMYAKCGDLENATSVF--ES 334
Query: 414 KDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
++ NS+IS LA HG GK A+ +F M L L PD +TF+A+L AC H G + EG
Sbjct: 335 ISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEG 394
Query: 474 KKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACK 533
K F M T V P ++H+GC++ LLGR G L EAY L+ M K N + ALL ACK
Sbjct: 395 LKIFSEMKT-QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACK 453
Query: 534 VHGDVELAKLACQELL---AVEHDHGARYVM-LSNMLADMDQHDEAASVRKAIDNVGIQK 589
VH D E+A+ + + ++ + + ++ +SN+ A ++ A ++R ++ G++K
Sbjct: 454 VHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEK 513
Query: 590 PPGWS 594
PG S
Sbjct: 514 SPGLS 518
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%)
Query: 68 LFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANART 127
+F V DL +WN +I ++ + T +L +CA +
Sbjct: 230 IFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGR 289
Query: 128 PHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMING 187
+G ++H + + FV+NAL+ Y D NA VFE + VR N MI+
Sbjct: 290 LDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISC 349
Query: 188 FVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSAC 223
G+ ++++ M ++PDE T + +L+AC
Sbjct: 350 LAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 385
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 232/464 (50%), Gaps = 46/464 (9%)
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCS 197
LV R V ++ AL+ Y F D A+ VF+QM V++ VS+ MI+G V
Sbjct: 176 LVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMG 235
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLE-DQRVGRQVHGLVYRELGCLGDNALLVNAL 256
+ + M+ +RP+ TL+++L AC L + +++HG +R GC D L A
Sbjct: 236 VDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRH-GCHADERLTA-AF 293
Query: 257 VDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVS 316
+ MY +CG +V ++R LF+ RDVV
Sbjct: 294 MTMYCRCG---------------------------------NVSLSRVLFETSKVRDVVM 320
Query: 317 WTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYA 376
W++MISGY+ G ++ + V ++A +S C L +H
Sbjct: 321 WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH---- 376
Query: 377 AENWHCGQNGGFTC--AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
++ CG A++DMYAKCGS+ A +VF + ++ K + ++S+I+ HG
Sbjct: 377 SQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE--KDLVSWSSMINAYGLHGH 434
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
G A+ +F+ M G D + F+A+L AC H+GLV+E + F + + Y + +EHY
Sbjct: 435 GSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYA 493
Query: 495 CVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA-KLACQELLAVEH 553
C ++LLGR G + +A+ + +NMP K +A IW +LLSAC+ HG +++A K+ EL+ E
Sbjct: 494 CYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEP 553
Query: 554 DHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVE 597
D+ A YV+LS + + + A VR+ + + K G+S +E
Sbjct: 554 DNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 190/425 (44%), Gaps = 43/425 (10%)
Query: 115 FPYLLKSCANARTPHL-GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
P ++K+CA + P L G QLHC +K+ V+N+L+ Y F + KVF++M
Sbjct: 49 LPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEM 108
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSL-EDQRVG 232
RD VSY +IN + G +MK++ +M +G P + +LL+ C+ + +V
Sbjct: 109 LHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVA 168
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
R H LV + + ++ LL ALVDMY K
Sbjct: 169 RMFHALVLVDER-MQESVLLSTALVDMYLK------------------------------ 197
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
D A +FDQM ++ VSWTAMISG ++P+ V +
Sbjct: 198 ---FDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTL 254
Query: 353 VAALSECARLG-ALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK 411
++ L C L L + IH H + T A + MY +CG++ + +F +
Sbjct: 255 LSVLPACVELNYGSSLVKEIHGFSFRHGCHADER--LTAAFMTMYCRCGNVSLSRVLF-E 311
Query: 412 TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVD 471
TSK + ++++S+ISG A G + L +MR G+ + VT +A++ AC +S L+
Sbjct: 312 TSK-VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLS 370
Query: 472 EGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA 531
S G + ++D+ + G LS A + + K + V W ++++A
Sbjct: 371 FA-STVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINA 428
Query: 532 CKVHG 536
+HG
Sbjct: 429 YGLHG 433
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 159/409 (38%), Gaps = 60/409 (14%)
Query: 36 MVVTGLHHDLFLSTALISFFAT--NHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNH 93
+V + + LSTAL+ + +H A H +F + + W A+I + N+
Sbjct: 176 LVDERMQESVLLSTALVDMYLKFDDHAAAFH---VFDQMEVKNEVSWTAMISGCVANQNY 232
Query: 94 AFXXXXXXXXXXXXXXXXXFTFPYLLKSCANART-PHLGLQLHCHLVKSRFHSHVFVANA 152
T +L +C L ++H + H+ + A
Sbjct: 233 EMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAA 292
Query: 153 LLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPD 212
+ YC + + +FE VRD V ++ MI+G+ G M +L MR GI +
Sbjct: 293 FMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEAN 352
Query: 213 EYTLVTLLSACSSLEDQRVGRQVHGLVYRELGC-LGDNALLVNALVDMYAKCGCLELAER 271
TL+ ++SAC++ VH + L C + LL NAL+DMYAKCG L A
Sbjct: 353 SVTLLAIVSACTNSTLLSFASTVHSQI---LKCGFMSHILLGNALIDMYAKCGSLSAARE 409
Query: 272 VVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXX 331
V F ++ E+D+VSW++MI+ Y G+
Sbjct: 410 V---------------------------------FYELTEKDLVSWSSMINAYGLHGHGS 436
Query: 332 XXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRI-------HLKYAAENWHCGQ 384
+ D++ +A LS C G +E + I H+ E++ C
Sbjct: 437 EALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYAC-- 494
Query: 385 NGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHG 433
+++ + G ID A +V K + +++S++S HG
Sbjct: 495 -------YINLLGRFGKIDDAFEVTINMPM-KPSARIWSSLLSACETHG 535
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 3/251 (1%)
Query: 287 TSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK 346
SL+S YA R++FD+M RD VS+ ++I+ G
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 347 PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
P V + L+ C R+G+ R+ + ++ + A+VDMY K A
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 407 DVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGH 466
VF + K + + ++ISG + + + LF M+ L P+ VT +++L AC
Sbjct: 206 HVF--DQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE 263
Query: 467 SGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWR 526
K S +G + + + R G +S + L + + V+W
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR-DVVMWS 322
Query: 527 ALLSACKVHGD 537
+++S GD
Sbjct: 323 SMISGYAETGD 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 16/273 (5%)
Query: 40 GLHHDLFLSTALISFFATNHRALRHSLR--LFSLVTNPDLFLWNAIIKAHSLSPNHAFXX 97
G H D L+ A ++ + R SL LF D+ +W+++I ++ + + +
Sbjct: 282 GCHADERLTAAFMTMYC---RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVM 338
Query: 98 XXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFY 157
T ++ +C N+ +H ++K F SH+ + NAL+ Y
Sbjct: 339 NLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMY 398
Query: 158 CVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLV 217
A +VF ++ +D VS++ MIN + G ++++ M G D+ +
Sbjct: 399 AKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFL 458
Query: 218 TLLSACSSL----EDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVV 273
+LSAC+ E Q + Q Y L A +N L + G ++ A V
Sbjct: 459 AILSACNHAGLVEEAQTIFTQAGK--YHMPVTLEHYACYINLL----GRFGKIDDAFEVT 512
Query: 274 SGVRNGKSVVAAWTSLVSAYASRGDVEVARRLF 306
+ K W+SL+SA + G ++VA ++
Sbjct: 513 INMPM-KPSARIWSSLLSACETHGRLDVAGKII 544
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 238/503 (47%), Gaps = 50/503 (9%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHF--YCVFRDAHNAYKVFEQMPV 175
LK C++ + HL LQ+H + S + F+ + L+ + +D A +
Sbjct: 19 FLKLCSSIK--HL-LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSD 75
Query: 176 RDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQV 235
++NM+ G+ + S+ V +M+ GI+P++ T LL AC+S GRQ+
Sbjct: 76 STPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQI 135
Query: 236 HGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYAS 295
V + + + N L+ +Y C
Sbjct: 136 QVEVLKH--GFDFDVYVGNNLIHLYGTCK------------------------------- 162
Query: 296 RGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAA 355
AR++FD+M ER+VVSW ++++ G PDE +V
Sbjct: 163 --KTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVL 220
Query: 356 LSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD 415
LS C G L LG+ +H + N A+VDMYAK G ++ A VF +
Sbjct: 221 LSACG--GNLSLGKLVHSQVMVRELEL--NCRLGTALVDMYAKSGGLEYARLVFERMVD- 275
Query: 416 KKTTILYNSIISGLAHHGLGKYAITLFEEM-RLLGLVPDGVTFVALLCACGHSGLVDEGK 474
K ++++I GLA +G + A+ LF +M + + P+ VTF+ +LCAC H+GLVD+G
Sbjct: 276 -KNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGY 334
Query: 475 KPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKV 534
K F M ++ + P M HYG +VD+LGR G L+EAY I MPF+ +AV+WR LLSAC +
Sbjct: 335 KYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSI 394
Query: 535 HGDVE---LAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPP 591
H D + + + + L+ +E V+++N A+ EAA VR+ + ++K
Sbjct: 395 HHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIA 454
Query: 592 GWSYVEMNGALHKFLAGDKSHPE 614
G S +E+ G+ H+F +G E
Sbjct: 455 GESCLELGGSFHRFFSGYDPRSE 477
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 189/443 (42%), Gaps = 62/443 (13%)
Query: 23 CRTIQQALQIQAHMVVTGLHHDLFLSTALI---SFFATNHRALRHSLRLFSLVTNPDLFL 79
C +I+ LQI + ++ L +D F+ + L+ S A +L L S + P
Sbjct: 23 CSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPST-- 80
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
WN + + +S S + TFP+LLK+CA+ G Q+ ++
Sbjct: 81 WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMK 199
K F V+V N L+H Y + +A KVF++M R+ VS+N ++ V G+ +
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 200 VLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVY-RELGCLGDNALLVNALVD 258
+M G PDE T+V LLSAC + +G+ VH V REL N L ALVD
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELEL---NCRLGTALVD 255
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWT 318
MYAK G L E AR +F++M +++V +W+
Sbjct: 256 MYAKSGGL---------------------------------EYARLVFERMVDKNVWTWS 282
Query: 319 AMISGYSHAGYXXXXXXX-XXXXXXXXMKPDEVDVVAALSECARLGALELG-------RR 370
AMI G + G+ ++P+ V + L C+ G ++ G +
Sbjct: 283 AMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEK 342
Query: 371 IHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLA 430
IH K H G A+VD+ + G ++ A D F K + +++ +++S +
Sbjct: 343 IH-KIKPMMIHYG-------AMVDILGRAGRLNEAYD-FIKKMPFEPDAVVWRTLLSACS 393
Query: 431 -HHGLGKYAITLFEEMRLLGLVP 452
HH I + RL+ L P
Sbjct: 394 IHHDEDDEGIGEKVKKRLIELEP 416
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 243/493 (49%), Gaps = 48/493 (9%)
Query: 145 SHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM 204
S+VFV +AL+ Y F A V +++ +D V +I G+ + G ++K M
Sbjct: 199 SNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM 258
Query: 205 RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCG 264
++P+EYT ++L +C +L+D G+ +HGL+
Sbjct: 259 LVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLM------------------------- 293
Query: 265 CLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGY 324
V SG +S +A+ TSL++ Y V+ + R+F + + VSWT++ISG
Sbjct: 294 -------VKSGF---ESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGL 343
Query: 325 SHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWH 381
G +KP+ + +AL C+ L E GR+IH KY +
Sbjct: 344 VQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDK 403
Query: 382 CGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITL 441
+G ++D+Y KCG D A VF S+ I N++I A +G G+ A+ L
Sbjct: 404 YAGSG-----LIDLYGKCGCSDMARLVFDTLSE--VDVISLNTMIYSYAQNGFGREALDL 456
Query: 442 FEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLG 501
FE M LGL P+ VT +++L AC +S LV+EG + F+S + +HY C+VDLLG
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLLG 515
Query: 502 RGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVM 561
R G L EA L + + V+WR LLSACKVH VE+A+ +++L +E ++
Sbjct: 516 RAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLIL 574
Query: 562 LSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDK-SHPEAKATEL 620
+SN+ A + + ++ + ++ ++K P S+VE+N H F+AGD SHP ++
Sbjct: 575 MSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILE 634
Query: 621 MLRDINMGVKSIG 633
L ++ K +G
Sbjct: 635 NLEELIKKSKDLG 647
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 167/394 (42%), Gaps = 46/394 (11%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
F LL+ C + R+ + H++KS F + + + L+ D A +VF+ M
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGM 125
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
R V++N +I ++ R+ ++++ M + PDEYTL ++ A S L ++ +
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
+ HGL LG N + +ALVDMY K
Sbjct: 186 RSHGLAVI-LGLEVSNVFVGSALVDMYVKF------------------------------ 214
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
G A+ + D++ E+DVV TA+I GYS G ++P+E
Sbjct: 215 ---GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYA 271
Query: 354 AALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC 410
+ L C L + G+ IH +K E+ Q T MY +C +D +L VF
Sbjct: 272 SVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLT-----MYLRCSLVDDSLRVF- 325
Query: 411 KTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLV 470
+ + + S+ISGL +G + A+ F +M + P+ T + L C + +
Sbjct: 326 -KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMF 384
Query: 471 DEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGG 504
+EG++ + T YG + ++DL G+ G
Sbjct: 385 EEGRQ-IHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 152/370 (41%), Gaps = 39/370 (10%)
Query: 37 VVTGLH-HDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAF 95
V+ GL ++F+ +AL+ + + R + + V D+ L A+I +S
Sbjct: 192 VILGLEVSNVFVGSALVDMYVKFGKT-REAKLVLDRVEEKDVVLITALIVGYSQKGEDTE 250
Query: 96 XXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLH 155
+T+ +L SC N + G +H +VKS F S + +LL
Sbjct: 251 AVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLT 310
Query: 156 FYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYT 215
Y ++ +VF+ + + VS+ +I+G V+ GR ++ M I+P+ +T
Sbjct: 311 MYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFT 370
Query: 216 LVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSG 275
L + L CS+L GRQ+HG+V + + + L+D+Y KCGC ++
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKY--GFDRDKYAGSGLIDLYGKCGCSDM------- 421
Query: 276 VRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXX 335
AR +FD + E DV+S MI Y+ G+
Sbjct: 422 --------------------------ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALD 455
Query: 336 XXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDM 395
++P++V V++ L C +E G + + + N + C +VD+
Sbjct: 456 LFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIML-TNDHYAC-MVDL 513
Query: 396 YAKCGSIDTA 405
+ G ++ A
Sbjct: 514 LGRAGRLEEA 523
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 13/284 (4%)
Query: 32 IQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSP 91
I MV +G L T+L++ + + SLR+F + P+ W ++I +
Sbjct: 289 IHGLMVKSGFESALASQTSLLTMY-LRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNG 347
Query: 92 NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVAN 151
FT L+ C+N G Q+H + K F + +
Sbjct: 348 REEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGS 407
Query: 152 ALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRP 211
L+ Y + A VF+ + D +S N MI + + G ++ + M G++P
Sbjct: 408 GLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP 467
Query: 212 DEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN----ALVDMYAKCGCLE 267
++ T++++L AC++ G ++ + D +L N +VD+ + G LE
Sbjct: 468 NDVTVLSVLLACNNSRLVEEGCELFDSFRK------DKIMLTNDHYACMVDLLGRAGRLE 521
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE 311
AE + + V N V+ W +L+SA VE+A R+ ++ E
Sbjct: 522 EAEMLTTEVINPDLVL--WRTLLSACKVHRKVEMAERITRKILE 563
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 125/295 (42%), Gaps = 23/295 (7%)
Query: 268 LAERVVSGVR--------NGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTA 319
+ ER +SG++ +G + + LV A GD++ AR++FD M ER +V+W +
Sbjct: 76 IDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNS 135
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH-----LK 374
+I+ + PDE + + + L + +R H L
Sbjct: 136 LIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILG 195
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
N G A+VDMY K G A V + ++K +L ++I G + G
Sbjct: 196 LEVSNVFVGS------ALVDMYVKFGKTREAKLVLDRV--EEKDVVLITALIVGYSQKGE 247
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
A+ F+ M + + P+ T+ ++L +CG+ + G K + G +
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNG-KLIHGLMVKSGFESALASQT 306
Query: 495 CVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELL 549
++ + R L+ ++ + + + N V W +L+S +G E+A + ++++
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGREEMALIEFRKMM 360
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 246/480 (51%), Gaps = 54/480 (11%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
F LL++C + R G+++H + +++ +++ L+ Y A A++VF++M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 175 VRDC--VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
RD ++N +I+G+ G+ +M + M G++PD +T +L AC + ++G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
+H + +E G + ++NALV MYAKCG
Sbjct: 215 EAIHRDLVKE--GFGYDVYVLNALVVMYAKCG---------------------------- 244
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
D+ AR +FD + +D VSW +M++GY H G ++PD+V +
Sbjct: 245 -----DIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAI 299
Query: 353 VAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF 409
+ L AR+ + + GR++H ++ E W A++ +Y+K G + A +F
Sbjct: 300 SSVL---ARVLSFKHGRQLHGWVIRRGME-WELS----VANALIVLYSKRGQLGQACFIF 351
Query: 410 CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+ + + T+ +N+IIS H + FE+M PDG+TFV++L C ++G+
Sbjct: 352 DQMLE--RDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGM 406
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILN-MPFKANAVIWRAL 528
V++G++ F MS YG++P+MEHY C+V+L GR G++ EAY +I+ M +A +W AL
Sbjct: 407 VEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGAL 466
Query: 529 LSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQ 588
L AC +HG+ ++ ++A Q L +E D+ + +L + + + ++ VR+ + + G++
Sbjct: 467 LYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 183/435 (42%), Gaps = 49/435 (11%)
Query: 22 SCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFAT-NHRALRHSL--RLFSLVTNPDLF 78
S R I +++ + L ++L +S+ L+ +A+ + + H + R+ ++P F
Sbjct: 104 SLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSP--F 161
Query: 79 LWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
WN++I ++ + FTFP +LK+C + +G +H L
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
VK F V+V NAL+ Y D A VF+ +P +D VS+N M+ G++ G ++
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEAL 281
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
+ M GI PD+ + ++L+ S + GRQ+HG V R
Sbjct: 282 DIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIR----------------- 321
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWT 318
R + ++ +L+ Y+ RG + A +FDQM ERD VSW
Sbjct: 322 ------------------RGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWN 363
Query: 319 AMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
A+IS +S KPD + V+ LS CA G +E G R+ + E
Sbjct: 364 AIISAHSK---NSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE 420
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
+ + C +V++Y + G ++ A + + + ++ +++ H G
Sbjct: 421 YGIDPKMEHYAC-MVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLH--GNTD 477
Query: 439 ITLFEEMRLLGLVPD 453
I RL L PD
Sbjct: 478 IGEVAAQRLFELEPD 492
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 349 EVDVVAALSE-CARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALD 407
E ++ A+L E C L A++ G R+H + + N G + +V +YA CG + A +
Sbjct: 91 EPEIFASLLETCYSLRAIDHGVRVH--HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHE 148
Query: 408 VFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHS 467
VF + SK + +NS+ISG A G + A+ L+ +M G+ PD TF +L ACG
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 468 GLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRA 527
G V G+ + G + +V + + G + +A ++ +P K + V W +
Sbjct: 209 GSVQIGEAIHRDL-VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNS 266
Query: 528 LLSACKVHG 536
+L+ HG
Sbjct: 267 MLTGYLHHG 275
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 218/422 (51%), Gaps = 14/422 (3%)
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
CV YN +I ++ G S+ + M ++P+ T +L+ A S G +HG
Sbjct: 52 CV-YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHG 110
Query: 238 LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
+ G L D + + V Y + G LE + ++ + N V A SL+ A G
Sbjct: 111 QALKR-GFLWD-PFVQTSFVRFYGEVGDLESSRKMFDDILN--PCVVACNSLLDACGRNG 166
Query: 298 DVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXX---XXXXXXXXMKPDEVDVVA 354
+++ A F +M DVVSWT +I+G+S G + P+E V+
Sbjct: 167 EMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 355 ALSECARL--GALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
LS CA G + LG++IH ++ A++DMY K G ++ AL +F +
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSK--EIILTTTLGTALLDMYGKAGDLEMALTIFDQI 284
Query: 413 SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE 472
+DKK +N+IIS LA +G K A+ +FE M+ + P+G+T +A+L AC S LVD
Sbjct: 285 -RDKKVCA-WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDL 342
Query: 473 GKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSAC 532
G + F S+ + Y + P EHYGCVVDL+GR GLL +A + I ++PF+ +A + ALL AC
Sbjct: 343 GIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGAC 402
Query: 533 KVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPG 592
K+H + EL ++L+ ++ H +YV LS A EA +RKA+ GI+K P
Sbjct: 403 KIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPA 462
Query: 593 WS 594
+S
Sbjct: 463 YS 464
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 74/325 (22%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYC----------VFRD 162
TFP L+K+ ++ + G+ LH +K F FV + + FY +F D
Sbjct: 87 LTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDD 146
Query: 163 AHN---------------------AYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVL 201
N A++ F++MPV D VS+ +INGF + G ++ V
Sbjct: 147 ILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVF 206
Query: 202 GDM----RGFGIRPDEYTLVTLLSACSSLEDQ--RVGRQVHGLVYRELGCLGDNALLVNA 255
G+M R I P+E T V++LS+C++ + R+G+Q+HG V + + L A
Sbjct: 207 GEMIQNERAV-ITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKE--IILTTTLGTA 263
Query: 256 LVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVV 315
L+DMY K G LE+A + +R+ K V AW +++SA AS G + A +F+ M
Sbjct: 264 LLDMYGKAGDLEMALTIFDQIRDKK--VCAWNAIISALASNGRPKQALEMFEMMK----- 316
Query: 316 SWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKY 375
S Y H P+ + ++A L+ CAR ++LG ++
Sbjct: 317 ------SSYVH--------------------PNGITLLAILTACARSKLVDLGIQLFSSI 350
Query: 376 AAENWHCGQNGGFTCAVVDMYAKCG 400
+E + + C VVD+ + G
Sbjct: 351 CSEYKIIPTSEHYGC-VVDLIGRAG 374
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 166/610 (27%), Positives = 278/610 (45%), Gaps = 63/610 (10%)
Query: 19 LASSCRTIQQAL---QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNP 75
L C ++ L + + ++ G ++ + T+++ +++ L + R+F V N
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGD-LESARRIFDCVNNR 263
Query: 76 DLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLH 135
D WN +I + FT+ +L C+ + LG +H
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 136 CHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAG 195
++ S + + + NALL YC D A+ VF ++ + VS+N +I+G G
Sbjct: 324 ARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGE 383
Query: 196 CSMKVLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN 254
+M + + R RPDEYT +SA + E G+ +HG V + LG
Sbjct: 384 QAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTK----LG------- 432
Query: 255 ALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV 314
Y + V T+L+S Y + E A+++FD M ERDV
Sbjct: 433 -----YERS-------------------VFVGTTLLSMYFKNREAESAQKVFDVMKERDV 468
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLK 374
V WT MI G+S G + D + + + C+ + L G
Sbjct: 469 VLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG------ 522
Query: 375 YAAENWHC-GQNGGFTC------AVVDMYAKCGSIDTALDVFCKTSK-DKKTTILYNSII 426
E +HC GF C A+VDMY K G +TA +F S D K +NS++
Sbjct: 523 ---EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKC---WNSML 576
Query: 427 SGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGV 486
+ HG+ + A++ FE++ G +PD VT+++LL AC H G +GK + M G+
Sbjct: 577 GAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGI 635
Query: 487 NPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKAN-AVIWRALLSACKVHGDVELAKLAC 545
+HY C+V+L+ + GL+ EA LI P N A +WR LLSAC ++++ A
Sbjct: 636 KAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAA 695
Query: 546 QELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEM-NGALHK 604
+++L ++ + A +++LSN+ A + ++ A +R+ I + K PG S++E+ N
Sbjct: 696 EQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQV 755
Query: 605 FLAGDKSHPE 614
F +GD+S+PE
Sbjct: 756 FSSGDQSNPE 765
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 121/535 (22%), Positives = 224/535 (41%), Gaps = 51/535 (9%)
Query: 22 SCRTIQQALQIQAHMVVTGL---HHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLF 78
S +++A QI A ++ G + + LIS + +L + ++F + + ++
Sbjct: 106 SITVLKRARQIHALVLTAGAGAATESPYANNNLISMY-VRCGSLEQARKVFDKMPHRNVV 164
Query: 79 LWNAIIKAHSLSPNHA-FXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCH 137
+NA+ A+S +P+ A + TF L++ CA +G L+
Sbjct: 165 SYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQ 224
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCS 197
++K + +V V ++L Y D +A ++F+ + RD V++N MI G ++ +
Sbjct: 225 IIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDG 284
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG--LVYRELGCLGDNALLVNA 255
+ +M G+ P ++T +L+ CS L +G+ +H +V L L L NA
Sbjct: 285 LMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP----LDNA 340
Query: 256 LVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVV 315
L+DMY C GD+ A +F ++ ++V
Sbjct: 341 LLDMYCSC---------------------------------GDMREAFYVFGRIHNPNLV 367
Query: 316 SWTAMISGYSHAGYXXXXXXXXXXXXXXXM-KPDEVDVVAALSECARLGALELGRRIHLK 374
SW ++ISG S G+ +PDE AA+S A G+ +H +
Sbjct: 368 SWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQ 427
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
+ G T ++ MY K ++A VF ++ +L+ +I G + G
Sbjct: 428 VTKLGYERSVFVGTT--LLSMYFKNREAESAQKVF--DVMKERDVVLWTEMIVGHSRLGN 483
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
+ A+ F EM DG + +++ AC ++ +G + F ++ G + M G
Sbjct: 484 SELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCG 542
Query: 495 CVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELL 549
+VD+ G+ G E I ++ + W ++L A HG VE A +++L
Sbjct: 543 ALVDMYGKNGKY-ETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL 596
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 171/424 (40%), Gaps = 49/424 (11%)
Query: 146 HVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMM--INGFVRAGRAGCSMKV-LG 202
+ + N L+ Y A KVF++MP R+ V+ + + +V G + S + LG
Sbjct: 21 YPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLG 80
Query: 203 DMRGFGIRP-DEY--TLVTLLSACSSLEDQRVGRQVHGLVYRE-LGCLGDNALLVNALVD 258
+ P +E ++V L C S+ + RQ+H LV G ++ N L+
Sbjct: 81 SFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLIS 140
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWT 318
MY +CG L E AR++FD+M R+VVS+
Sbjct: 141 MYVRCGSL---------------------------------EQARKVFDKMPHRNVVSYN 167
Query: 319 AMISGYS-HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAA 377
A+ S YS + + +KP+ + + CA L + +G ++ +
Sbjct: 168 ALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIK 227
Query: 378 ENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF-CKTSKDKKTTILYNSIISGLAHHGLGK 436
+ N +V+ MY+ CG +++A +F C ++D + +N++I G + +
Sbjct: 228 LGY--SDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD---AVAWNTMIVGSLKNDKIE 282
Query: 437 YAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCV 496
+ F M + G+ P T+ +L C G GK + V + +
Sbjct: 283 DGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL-IHARIIVSDSLADLPLDNAL 341
Query: 497 VDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHG 556
+D+ G + EA++ + N V W +++S C +G E A L + LL +
Sbjct: 342 LDMYCSCGDMREAFY-VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 557 ARYV 560
Y
Sbjct: 401 DEYT 404
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 183/345 (53%), Gaps = 5/345 (1%)
Query: 254 NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD 313
ALV MY G + A +V + V W +++ + GD E A ++M R
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPV--TWNVMITGLTNLGDFEKALCFLEKMPNRT 219
Query: 314 VVSWTAMISGYSHAGYXXXXXXXXXXXXX-XXMKPDEVDVVAALSECARLGALELGRRIH 372
VVSWT +I GY+ +KP+E+ ++A L LG L++ +H
Sbjct: 220 VVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVH 279
Query: 373 LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHH 432
Y + + T +++D YAKCG I +A F + +K + + ++IS A H
Sbjct: 280 -AYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIH 338
Query: 433 GLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG-KKPFESMSTVYGVNPQME 491
G+GK A+++F++M LGL P+ VT +++L AC H GL +E + F +M Y + P ++
Sbjct: 339 GMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVK 398
Query: 492 HYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAV 551
HYGC+VD+L R G L EA + L +P + AV+WR LL AC V+ D ELA+ ++L+ +
Sbjct: 399 HYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMEL 458
Query: 552 EHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYV 596
E HG YV++SN+ + +A RK +D G+ K PG S V
Sbjct: 459 ERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 162/352 (46%), Gaps = 52/352 (14%)
Query: 77 LFLWNAIIKAHSL--SPNHAFXXXXXXXX-------XXXXXXXXXFTFPYLLKSCANART 127
LFL+N +++ +SL +P HA+ FT+ +LLK+ +N R
Sbjct: 77 LFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRF 136
Query: 128 PHLGLQLHCHLVKSR--FHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMI 185
P L L + H + + F SHV+V AL+ Y V + +A+KVF++MP R+ V++N+MI
Sbjct: 137 PSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMI 196
Query: 186 NGFVRAG---RAGCSMKVLGD---------MRGF--------------------GIRPDE 213
G G +A C ++ + + + G+ I+P+E
Sbjct: 197 TGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNE 256
Query: 214 YTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVV 273
T++ +L A +L D ++ VH V + G + + + N+L+D YAKCGC++ A +
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKR-GFVPCDIRVTNSLIDAYAKCGCIQSAFKFF 315
Query: 274 SGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER-----DVVSWTAMISGYSHAG 328
+ NG+ + +WT+++SA+A G + A +F M ER + V+ ++++ SH G
Sbjct: 316 IEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM-ERLGLKPNRVTMISVLNACSHGG 374
Query: 329 YXXXXXXXXXXXXXXXMK--PDEVDVVAALSECARLGALELGRRIHLKYAAE 378
K PD + R G LE +I L+ E
Sbjct: 375 LAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIE 426
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/581 (27%), Positives = 261/581 (44%), Gaps = 53/581 (9%)
Query: 59 HRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYL 118
R + + +LF ++ D+ WN +I + +S F++ +
Sbjct: 84 RREMNQARKLFDVMPKRDVVTWNTMISGY-VSCGGIRFLEEARKLFDEMPSRDSFSWNTM 142
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
+ A R L L + + S +A++ +C + +A +F +MPV+D
Sbjct: 143 ISGYAKNRRIGEALLLFEKMPERNAVSW----SAMITGFCQNGEVDSAVVLFRKMPVKDS 198
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGF--GIRPDEYTLVTLL---------SACSSLE 227
++ G ++ R + VLG G Y TL+ A L
Sbjct: 199 SPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLF 258
Query: 228 DQ--RVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV--- 282
DQ + HG +RE C N + N+++ Y K G + A + +++ ++
Sbjct: 259 DQIPDLCGDDHGGEFRERFC--KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWN 316
Query: 283 --------------------------VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVS 316
+W +VS YAS G+VE+AR F++ E+ VS
Sbjct: 317 TMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS 376
Query: 317 WTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYA 376
W ++I+ Y KPD + + LS L L LG ++H
Sbjct: 377 WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV 436
Query: 377 AENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGK 436
+ A++ MY++CG I + +F + K K+ I +N++I G A HG
Sbjct: 437 KT---VIPDVPVHNALITMYSRCGEIMESRRIFDEM-KLKREVITWNAMIGGYAFHGNAS 492
Query: 437 YAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCV 496
A+ LF M+ G+ P +TFV++L AC H+GLVDE K F SM +VY + PQMEHY +
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSL 552
Query: 497 VDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHG 556
V++ G EA ++I +MPF+ + +W ALL AC+++ +V LA +A + + +E +
Sbjct: 553 VNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESS 612
Query: 557 ARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVE 597
YV+L NM ADM DEA+ VR +++ I+K G S+V+
Sbjct: 613 TPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 185/444 (41%), Gaps = 77/444 (17%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG-FGI 209
N ++ Y R+ + A K+F+ MP RD V++N MI+G+V G ++ L + R F
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCG----GIRFLEEARKLFDE 130
Query: 210 RP--DEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
P D ++ T++S + +++R+G + L++ ++ NA+ +A++ + + G ++
Sbjct: 131 MPSRDSFSWNTMISGYA--KNRRIGEAL--LLFEKMP--ERNAVSWSAMITGFCQNGEVD 184
Query: 268 ----------------LAERVVSGVRNGKSVVAAW-------------------TSLVSA 292
L V ++N + AAW +L+
Sbjct: 185 SAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVG 244
Query: 293 YASRGDVEVARRLFDQM---------GE------RDVVSWTAMISGYSHAGYXXXXXXXX 337
Y RG VE AR LFDQ+ GE ++VVSW +MI Y G
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVG--------- 295
Query: 338 XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYA 397
+ D++ +S + R+ +A + ++ +V YA
Sbjct: 296 -DVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYA 354
Query: 398 KCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTF 457
G+++ A F KT +K T+ +NSII+ + K A+ LF M + G PD T
Sbjct: 355 SVGNVELARHYFEKTP--EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 458 VALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP 517
+LL A +GLV+ V V P + + ++ + R G + E+ + M
Sbjct: 413 TSLLSAS--TGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 518 FKANAVIWRALLSACKVHGDVELA 541
K + W A++ HG+ A
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEA 494
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 110/286 (38%), Gaps = 73/286 (25%)
Query: 285 AWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXX 344
W +++S Y R ++ AR+LFD M +RDVV+W MISGY
Sbjct: 73 TWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGY-------------------- 112
Query: 345 MKPDEVDVVAALSECARLGALELGRRIHLKYAAEN---WHCGQNGGFTCAVVDMYAKCGS 401
C + LE R++ + + + W+ +G YAK
Sbjct: 113 ------------VSCGGIRFLEEARKLFDEMPSRDSFSWNTMISG---------YAKNRR 151
Query: 402 IDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL 461
I AL +F K ++ + ++++I+G +G A+ LF +M + P L+
Sbjct: 152 IGEALLLFEKMP--ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLI 209
Query: 462 ---------CACGHSGLVDEGKK----PFESMSTVYGVNPQMEHYGCVVDLL------GR 502
G G + G++ + ++ YG Q+E C+ D +
Sbjct: 210 KNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDH 269
Query: 503 GGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQEL 548
GG E F N V W +++ A GDV A+L ++
Sbjct: 270 GGEFRER--------FCKNVVSWNSMIKAYLKVGDVVSARLLFDQM 307
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 247/541 (45%), Gaps = 50/541 (9%)
Query: 62 LRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKS 121
+ ++ LF + P++ WN +I + F P LK+
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGF-VDKGSPRALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 122 CANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVF--EQMPVRDCV 179
C+ +G QLHC +VKS S F +AL+ Y A VF E++ V V
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 180 S-YNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
+ +N M++GF+ ++ +L + + D YTL L C + + R+G QVH L
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSL 367
Query: 239 VYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGD 298
V VVSG V + LV +A+ G+
Sbjct: 368 V--------------------------------VVSGYELDYIVGSI---LVDLHANVGN 392
Query: 299 VEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSE 358
++ A +LF ++ +D+++++ +I G +G+ + D+ V L
Sbjct: 393 IQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKV 452
Query: 359 CARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD 415
C+ L +L G++IH +K E+ A+VDMY KCG ID + +F
Sbjct: 453 CSSLASLGWGKQIHGLCIKKGYESEPVT-----ATALVDMYVKCGEIDNGVVLF--DGML 505
Query: 416 KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKK 475
++ + + II G +G + A F +M +G+ P+ VTF+ LL AC HSGL++E +
Sbjct: 506 ERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARS 565
Query: 476 PFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVH 535
E+M + YG+ P +EHY CVVDLLG+ GL EA LI MP + + IW +LL+AC H
Sbjct: 566 TLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTH 625
Query: 536 GDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSY 595
+ L + ++LL D + Y LSN A + D+ + VR+A +G K G S+
Sbjct: 626 KNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSW 684
Query: 596 V 596
+
Sbjct: 685 I 685
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 205/452 (45%), Gaps = 17/452 (3%)
Query: 119 LKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC 178
L+ C + G + H++K +VF+AN ++ Y FR +A+KVF++M R+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR-PDEYTLVTLLSACSSLEDQRVGRQVHG 237
V++ M++G+ G+ ++++ M +E+ +L AC + D ++G
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI---- 127
Query: 238 LVYRELG--CLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYAS 295
LVY +G L + +L+N++VDMY K G L A + S +W +L+S Y
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSS--TSWNTLISGYCK 185
Query: 296 RGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAA 355
G ++ A LF +M + +VVSW +ISG+ G + D +
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCG 244
Query: 356 LSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD 415
L C+ G L +G+++H A++DMY+ CGS+ A DVF +
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFA--ISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 416 KKTTI-LYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
+++ ++NS++SG + + A+ L ++ L D T L C + + G
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGL 362
Query: 475 KPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKV 534
+ S+ V G +VDL G + +A+ L +P K + + + L+ C
Sbjct: 363 Q-VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVK 420
Query: 535 HGDVELAKLACQELLAVEHDHGARYVMLSNML 566
G LA +EL+ + D A ++SN+L
Sbjct: 421 SGFNSLAFYLFRELIKLGLD--ADQFIVSNIL 450
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 190/460 (41%), Gaps = 58/460 (12%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLF---SLVTNPDLFLWNAIIKAH 87
Q+ +V +GL F +ALI + +N +L ++ +F L N + +WN+++
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMY-SNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 88 SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
++ + +T LK C N LGLQ+H +V S +
Sbjct: 318 LINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDY 377
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
V + L+ + + +A+K+F ++P +D ++++ +I G V++G + + ++
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
G+ D++ + +L CSSL G+Q+HGL ++ + ALVDMY KCG ++
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKK--GYESEPVTATALVDMYVKCGEID 495
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
+ G+ + V +WT ++ + G VE A R F +M
Sbjct: 496 NGVVLFDGML--ERDVVSWTGIIVGFGQNGRVEEAFRYFHKM------------------ 535
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGR--------RIHLKYAAEN 379
++P++V + LS C G LE R L+ E+
Sbjct: 536 -------------INIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEH 582
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAI 439
++C VVD+ + G A ++ K + TI + + + H G +
Sbjct: 583 YYC---------VVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAG--LV 631
Query: 440 TLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFES 479
T+ E L G D + +L A G+ D+ K E+
Sbjct: 632 TVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREA 671
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 124/585 (21%), Positives = 224/585 (38%), Gaps = 105/585 (17%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
+ ++ IQAH++ G+ ++F++ +IS + + R L + ++F ++ ++ W +
Sbjct: 19 QAFKRGESIQAHVIKQGISQNVFIANNVISMY-VDFRLLSDAHKVFDEMSERNIVTWTTM 77
Query: 84 IKAHSL--SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKS 141
+ ++ PN A F + +LK+C LG+ ++ + K
Sbjct: 78 VSGYTSDGKPNKAIELYRRMLDSEEEAANE-FMYSAVLKACGLVGDIQLGILVYERIGKE 136
Query: 142 RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG--------- 192
V + N+++ Y A F+++ S+N +I+G+ +AG
Sbjct: 137 NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLF 196
Query: 193 ---------RAGC------------SMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRV 231
C +++ L M+ G+ D + L L ACS +
Sbjct: 197 HRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM 256
Query: 232 GRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNG-KSVVAAWTSLV 290
G+Q+H V + L + ++AL+DMY+ CG L A V + S VA W S++
Sbjct: 257 GKQLHCCVVKS--GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 291 SAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEV 350
S + + E A L Q+ + D+ + +SG
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSG--------------------------- 347
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC 410
AL C L LG ++H + G +VD++A G+I A +F
Sbjct: 348 ----ALKICINYVNLRLGLQVHSLVVVSGYELDYIVG--SILVDLHANVGNIQDAHKLFH 401
Query: 411 KTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGH---- 466
+ K I ++ +I G G A LF E+ LGL D +L C
Sbjct: 402 RLP--NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASL 459
Query: 467 ----------------------SGLVDEGKKPFESMSTVYGVNPQMEH----YGCVVDLL 500
+ LVD K E + V + +E + ++
Sbjct: 460 GWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGF 519
Query: 501 GRGGLLSEA---YHLILNMPFKANAVIWRALLSACKVHGDVELAK 542
G+ G + EA +H ++N+ + N V + LLSAC+ G +E A+
Sbjct: 520 GQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEAR 564
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/573 (24%), Positives = 278/573 (48%), Gaps = 42/573 (7%)
Query: 27 QQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKA 86
++ +Q+ ++ G ++F+ +AL+ +A R + +L+LF + + +L + N +++
Sbjct: 129 REGIQVHCRVISLGFGCNMFVRSALVGLYAC-LRLVDVALKLFDEMLDRNLAVCNLLLRC 187
Query: 87 HSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFH-S 145
+ T+ Y+++ C++ R + G QLH +VKS ++ S
Sbjct: 188 FCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNIS 247
Query: 146 HVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMR 205
++FVAN L+ +Y D + + F +P +D +S+N +++ G S+ + M+
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC 265
+G RP ++ L+ CS D + G+Q+H V + +G + + +AL+DMY KC
Sbjct: 308 FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLK-MGFDVSSLHVQSALIDMYGKCNG 366
Query: 266 LELAERVVSGVR--NGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISG 323
+E + + + N + + TSL+ ++ +E+ + D+ D V+ + ++
Sbjct: 367 IENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKA 426
Query: 324 YSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCG 383
S + P+ + + CA I YAA+
Sbjct: 427 LSLS------------------LPESLHSCTLVHCCA----------IKSGYAAD----- 453
Query: 384 QNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFE 443
+C+++D Y K G + + VF D SII+G A +G+G + +
Sbjct: 454 --VAVSCSLIDAYTKSGQNEVSRKVF--DELDTPNIFCLTSIINGYARNGMGTDCVKMLR 509
Query: 444 EMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRG 503
EM + L+PD VT +++L C HSGLV+EG+ F+S+ + YG++P + Y C+VDLLGR
Sbjct: 510 EMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRA 569
Query: 504 GLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLS 563
GL+ +A L+L A+ V W +LL +C++H + + + A + L+ +E ++ A Y+ +S
Sbjct: 570 GLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVS 629
Query: 564 NMLADMDQHDEAASVRKAIDNVGIQKPPGWSYV 596
++ + + +R+ + + + G+S V
Sbjct: 630 KFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 148/353 (41%), Gaps = 47/353 (13%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
TFP +L C++ G+Q+HC ++ F ++FV +AL+ Y R A K+F++M
Sbjct: 114 TFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
R+ N+++ F + G + +V M G+ + T ++ CS G+
Sbjct: 174 LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGK 233
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
Q+H LV + G N + N LVD Y+ CG
Sbjct: 234 QLHSLVVKS-GWNISNIFVANVLVDYYSACG----------------------------- 263
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
D+ + R F+ + E+DV+SW +++S + G +P +
Sbjct: 264 ----DLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFM 319
Query: 354 AALSECARLGALELGRRIH-----LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDV 408
+ L+ C+R ++ G++IH + + + H A++DMY KC I+ + +
Sbjct: 320 SFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQS------ALIDMYGKCNGIENSALL 373
Query: 409 FCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL 461
+ S NS+++ L H G+ K I +F M G D VT +L
Sbjct: 374 Y--QSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVL 424
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 136/314 (43%), Gaps = 44/314 (14%)
Query: 165 NAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVL---GDMRGFGIRPDEYTLVTLLS 221
+A++ F++M VRD V+YN++I+G R GCS++ + +M G+R T ++LS
Sbjct: 64 SAHEAFDEMSVRDVVTYNLLISG---NSRYGCSLRAIELYAEMVSCGLRESASTFPSVLS 120
Query: 222 ACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKS 281
CS R G QVH V LG G N + +ALV +YA CL L
Sbjct: 121 VCSDELFCREGIQVHCRVI-SLG-FGCNMFVRSALVGLYA---CLRL------------- 162
Query: 282 VVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXX 341
V+VA +LFD+M +R++ ++ + G
Sbjct: 163 -----------------VDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME 205
Query: 342 XXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGS 401
+ + + + C+ + G+++H W+ N +VD Y+ CG
Sbjct: 206 LEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNI-SNIFVANVLVDYYSACGD 264
Query: 402 IDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL 461
+ ++ F + +K I +NSI+S A +G ++ LF +M+ G P F++ L
Sbjct: 265 LSGSMRSF--NAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFL 322
Query: 462 CACGHSGLVDEGKK 475
C + + GK+
Sbjct: 323 NFCSRNSDIQSGKQ 336
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 19/249 (7%)
Query: 297 GDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAAL 356
G++ A FD+M RDVV++ +ISG S G ++ + L
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 357 SECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDK 416
S C+ G ++H + + + C N A+V +YA +D AL +F D+
Sbjct: 120 SVCSDELFCREGIQVHCRVISLGFGC--NMFVRSALVGLYACLRLVDVALKLF-DEMLDR 176
Query: 417 KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK-- 474
+ N ++ G K ++ M L G+ +G+T+ ++ C H LV EGK
Sbjct: 177 NLAVC-NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL 235
Query: 475 -----KPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
K ++S ++ N +++Y DL G + S N + + + W +++
Sbjct: 236 HSLVVKSGWNISNIFVANVLVDYYSACGDL--SGSMRS------FNAVPEKDVISWNSIV 287
Query: 530 SACKVHGDV 538
S C +G V
Sbjct: 288 SVCADYGSV 296
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 151/536 (28%), Positives = 240/536 (44%), Gaps = 66/536 (12%)
Query: 68 LFSLVTNPDLFLWNAIIKAHSLS--PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANA 125
LF T+ DL WN++I A S + + A T +L SC ++
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Query: 126 RTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP-VRDCVSYNMM 184
+ G +HC L K D +A+ E M RD S+N +
Sbjct: 511 DSLIFGKSVHCWLQK-------------------LGDLTSAFLRLETMSETRDLTSWNSV 551
Query: 185 INGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYREL 243
I+G +G S++ M G IR D TL+ +SA +L GR HGL + L
Sbjct: 552 ISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSL 611
Query: 244 GCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVAR 303
L + L N L+ MY +C D+E A
Sbjct: 612 REL--DTQLQNTLITMYGRCK---------------------------------DIESAV 636
Query: 304 RLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG 363
++F + + ++ SW +IS S ++P+E+ V LS +LG
Sbjct: 637 KVFGLISDPNLCSWNCVISALSQ---NKAGREVFQLFRNLKLEPNEITFVGLLSASTQLG 693
Query: 364 ALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYN 423
+ G + H + N + A+VDMY+ CG ++T + VF + + + +N
Sbjct: 694 STSYGMQAHCHLIRRGFQA--NPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISA--WN 749
Query: 424 SIISGLAHHGLGKYAITLFEEMRLLG-LVPDGVTFVALLCACGHSGLVDEGKKPFESMST 482
S+IS HG+G+ A+ LF+E+ + P+ +F++LL AC HSG +DEG ++ M
Sbjct: 750 SVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEE 809
Query: 483 VYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAK 542
+GV P EH +VD+LGR G L EAY I + A +W ALLSAC HGD +L K
Sbjct: 810 KFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGK 869
Query: 543 LACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEM 598
+ L +E D+ + Y+ L+N + +EA +RK +++ ++K PG+S +++
Sbjct: 870 EVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 128/530 (24%), Positives = 219/530 (41%), Gaps = 91/530 (17%)
Query: 37 VVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFX 96
+ TGL D L AL++ +A L + +F+ + + D+ WN I+ + +
Sbjct: 215 IETGLVGDSSLCNALMNLYAKGEN-LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKS 273
Query: 97 XXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF--HSHVFVANALL 154
TF ++ +C++ LG LH ++KS + +HV V N+++
Sbjct: 274 LQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSII 333
Query: 155 HFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG-IRPDE 213
Y D A VFE++ RD +S N ++NGF G + +L M+ I+PD
Sbjct: 334 SMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDI 393
Query: 214 YTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNAL-LVNALVDMYAKCGCLELAERV 272
T+V++ S C L R GR VHG R + AL ++N+++DMY KCG AE +
Sbjct: 394 ATVVSITSICGDLSFSREGRAVHGYTVRME--MQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 273 VSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXX 332
+ V +W S++SA++ G A+ LF + ++S YS + +
Sbjct: 452 FKTTTHRDLV--SWNSMISAFSQNGFTHKAKNLFKE-----------VVSEYSCSKFSLS 498
Query: 333 XXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAV 392
V+A L+ C +L G+ +H W
Sbjct: 499 T------------------VLAILTSCDSSDSLIFGKSVHC------W------------ 522
Query: 393 VDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVP 452
K G + +A + +T + + +NS+ISG A G ++ F+ M G +
Sbjct: 523 ---LQKLGDLTSAF-LRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIR 578
Query: 453 -DGVTFVALLCACGHSGLVDEGK----------------------------KPFESMSTV 483
D +T + + A G+ GLV +G+ K ES V
Sbjct: 579 HDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKV 638
Query: 484 YGV--NPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSA 531
+G+ +P + + CV+ L + E + L N+ + N + + LLSA
Sbjct: 639 FGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSA 688
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 170/407 (41%), Gaps = 38/407 (9%)
Query: 40 GLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXX 99
GL DL S+ L++F+ + S LF + D+ +WN++I A + + +
Sbjct: 117 GLLQDLATSSKLLTFYGRTGELVSSSC-LFDELKEKDVIVWNSMITALNQNGRYIAAVGL 175
Query: 100 XXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCV 159
T + ++ LHC +++ + NAL++ Y
Sbjct: 176 FIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAK 235
Query: 160 FRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTL 219
+ +A VF M RD VS+N ++ + G S++ M G G D T +
Sbjct: 236 GENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCV 295
Query: 220 LSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNG 279
+SACSS+E+ +G +HGLV + + + N+++ MY+KC
Sbjct: 296 ISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKC---------------- 339
Query: 280 KSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAG-YXXXXXXXXX 338
GD E A +F+++ RDV+S A+++G++ G +
Sbjct: 340 -----------------GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQ 382
Query: 339 XXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAK 398
++PD VV+ S C L GR +H Y + +V+DMY K
Sbjct: 383 MQSVDKIQPDIATVVSITSICGDLSFSREGRAVH-GYTVRMEMQSRALEVINSVIDMYGK 441
Query: 399 CGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM 445
CG + T ++ KT+ + + +NS+IS + +G A LF+E+
Sbjct: 442 CG-LTTQAELLFKTTTHRD-LVSWNSMISAFSQNGFTHKAKNLFKEV 486
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 158/401 (39%), Gaps = 58/401 (14%)
Query: 66 LRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANA 125
LRL ++ DL WN++I + S +H LL + + +
Sbjct: 534 LRLETMSETRDLTSWNSVISGCASSGHH--LESLRAFQAMSREGKIRHDLITLLGTISAS 591
Query: 126 RTPHLGLQLHCH---LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYN 182
L LQ C +KS + N L+ Y +D +A KVF + + S+N
Sbjct: 592 GNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWN 651
Query: 183 MMINGFV--RAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVY 240
+I+ +AGR +V R + P+E T V LLSA + L G Q H +
Sbjct: 652 CVISALSQNKAGR-----EVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLI 706
Query: 241 RELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRN-GKSVVAAWTSLVSAYASRGDV 299
R N + ALVDMY+ CG LE +V RN G + ++AW S++SA+ G
Sbjct: 707 RR--GFQANPFVSAALVDMYSSCGMLETGMKV---FRNSGVNSISAWNSVISAHGFHGMG 761
Query: 300 EVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSEC 359
E A LF ++ M+P++ ++ LS C
Sbjct: 762 EKAMELFKELSSNS------------------------------EMEPNKSSFISLLSAC 791
Query: 360 ARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTT 419
+ G ++ G + K E + +VDM + G + A + + +K
Sbjct: 792 SHSGFIDEGLS-YYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAG 850
Query: 420 ILYNSIISGLAHHG---LGKYAITLFEEMRLLGLVPDGVTF 457
+ + +++S +HG LGK + EM PD ++
Sbjct: 851 V-WGALLSACNYHGDTKLGKEVAEVLFEME-----PDNASY 885
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 11/269 (4%)
Query: 44 DLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXX 103
D L LI+ + + + ++++F L+++P+L WN +I A LS N A
Sbjct: 615 DTQLQNTLITMYG-RCKDIESAVKVFGLISDPNLCSWNCVISA--LSQNKA-GREVFQLF 670
Query: 104 XXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDA 163
TF LL + + G+Q HCHL++ F ++ FV+ AL+ Y
Sbjct: 671 RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGML 730
Query: 164 HNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVTLLSA 222
KVF V ++N +I+ G +M++ ++ + P++ + ++LLSA
Sbjct: 731 ETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSA 790
Query: 223 CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV 282
CS G + + + G V +VDM + G L A ++G+ +
Sbjct: 791 CSHSGFIDEGLSYYKQMEEKFGVKPVTEHRV-WIVDMLGRAGKLREAYEFITGIGEPQK- 848
Query: 283 VAAWTSLVSAYASRGDV----EVARRLFD 307
W +L+SA GD EVA LF+
Sbjct: 849 AGVWGALLSACNYHGDTKLGKEVAEVLFE 877
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 157/590 (26%), Positives = 264/590 (44%), Gaps = 61/590 (10%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLF 78
L++S + Q MV G+++ LFL L+ + T R + +LF + ++
Sbjct: 45 LSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAY-TKIREFDDADKLFDEMPLRNIV 103
Query: 79 LWNAIIKA---HSLSPNHA--FXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQ 133
WN +I NH +F L++ C ++ G+Q
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG- 192
LHC +VK S F + +L+HFY A +VFE + RD V +N +++ +V G
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 193 --RAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNA 250
A +K++G + R D +T +LLSAC + G+Q+H ++++
Sbjct: 224 IDEAFGLLKLMGSDKN-RFRGDYFTFSSLLSACRIEQ----GKQIHAILFK--------- 269
Query: 251 LLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG 310
V+ D + T+L++ YA + AR F+ M
Sbjct: 270 --VSYQFD------------------------IPVATALLNMYAKSNHLSDARECFESMV 303
Query: 311 ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR 370
R+VVSW AMI G++ G ++PDE+ + LS CA+ A+ ++
Sbjct: 304 VRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQ 363
Query: 371 IH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIIS 427
+ K + ++ N +++ Y++ G++ AL C S + + + S+I
Sbjct: 364 VQAMVTKKGSADFLSVAN-----SLISSYSRNGNLSEAL--LCFHSIREPDLVSWTSVIG 416
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVN 487
LA HG + ++ +FE M L L PD +TF+ +L AC H GLV EG + F+ M+ Y +
Sbjct: 417 ALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIE 475
Query: 488 PQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQE 547
+ EHY C++DLLGR G + EA ++ +MP + + A C +H E K ++
Sbjct: 476 AEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKK 535
Query: 548 LLAVEHDHGARYVMLSNMLADMDQHDEAASVRK-AIDNVGIQKPPGWSYV 596
LL +E Y +LSN ++AA +RK N K PG S++
Sbjct: 536 LLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 206/428 (48%), Gaps = 39/428 (9%)
Query: 168 KVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLE 227
++ +Q P+ +N ++ ++R +++V M + PD Y+L ++ A +
Sbjct: 74 RILDQYPI--AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH 131
Query: 228 DQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWT 287
D +G+++H + R LG +GD E E +
Sbjct: 132 DFTLGKELHSVAVR-LGFVGD------------------EFCE----------------S 156
Query: 288 SLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKP 347
++ Y G+ E AR++FD+ ER + SW A+I G +HAG ++P
Sbjct: 157 GFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEP 216
Query: 348 DEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALD 407
D+ +V+ + C LG L L ++H + +++DMY KCG +D A
Sbjct: 217 DDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASH 276
Query: 408 VFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHS 467
+F ++ + ++S+I G A +G A+ F +MR G+ P+ +TFV +L AC H
Sbjct: 277 IF--EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHG 334
Query: 468 GLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRA 527
GLV+EGK F M + + + P + HYGC+VDLL R G L EA ++ MP K N ++W
Sbjct: 335 GLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGC 394
Query: 528 LLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGI 587
L+ C+ GDVE+A+ ++ +E + YV+L+N+ A + VRK + +
Sbjct: 395 LMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKV 454
Query: 588 QKPPGWSY 595
K P +SY
Sbjct: 455 AKIPAYSY 462
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 148/325 (45%), Gaps = 35/325 (10%)
Query: 8 SSASYDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLR 67
S +++ A L S+C ++ + +I H D+F S L +
Sbjct: 42 SPQDRNKLLATLLSNCTSLARVRRI---------HGDIFRSRILDQY------------- 79
Query: 68 LFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANART 127
P FLWN I++++ + ++ P ++K+
Sbjct: 80 -------PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHD 132
Query: 128 PHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMING 187
LG +LH V+ F F + + YC + NA KVF++ P R S+N +I G
Sbjct: 133 FTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGG 192
Query: 188 FVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLG 247
AGRA ++++ DM+ G+ PD++T+V++ ++C L D + Q+H V +
Sbjct: 193 LNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEK 252
Query: 248 DNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
+ +++N+L+DMY KCG ++LA + +R V +W+S++ YA+ G+ A F
Sbjct: 253 SDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN--VVSWSSMIVGYAANGNTLEALECFR 310
Query: 308 QMGERDV----VSWTAMISGYSHAG 328
QM E V +++ ++S H G
Sbjct: 311 QMREFGVRPNKITFVGVLSACVHGG 335
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 164/637 (25%), Positives = 276/637 (43%), Gaps = 82/637 (12%)
Query: 17 ALLASSCRTIQQAL---QIQAHMVVTGLHHDLFLSTALISFF-ATNHRALRHSLRLFSLV 72
A L S+C + + Q+ AH + +GL D L L++F+ A N ++ S +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 73 TNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGL 132
+P WN +I ++ + FT+P ++K+CA G
Sbjct: 147 LHP--LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG 192
+H + S +++V NAL+ Y F A ++F++M RD VS+N +IN +
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 193 RAGCSMKVLGDM-----------------------------------RGFGIRPDEYTLV 217
+ G + K+L M R +R ++
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 218 TLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR 277
L ACS + + G+ H LV R D + N+L+ MY++C L A V V
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 278 NGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXX 337
++ W S++S +A E L +M ++SG+
Sbjct: 385 ANS--LSTWNSIISGFAYNERSEETSFLLKEM----------LLSGF------------- 419
Query: 338 XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYA 397
P+ + + + L AR+G L+ G+ H Y ++VDMYA
Sbjct: 420 --------HPNHITLASILPLFARVGNLQHGKEFHC-YILRRQSYKDCLILWNSLVDMYA 470
Query: 398 KCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTF 457
K G I A VF S K+ + Y S+I G G G+ A+ F++M G+ PD VT
Sbjct: 471 KSGEIIAAKRVF--DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTM 528
Query: 458 VALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP 517
VA+L AC HS LV EG F M V+G+ ++EHY C+VDL R G L +A + +P
Sbjct: 529 VAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Query: 518 FKANAVIWRALLSACKVHGDVELAKLACQE-LLAVEHDHGARYVMLSNMLADMDQHDEAA 576
++ ++ + LL AC +HG+ + + A + LL + +H Y++L++M A +
Sbjct: 589 YEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLV 648
Query: 577 SVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHP 613
+V+ + ++G+QK ++ +E + L G+ + P
Sbjct: 649 TVKTLLSDLGVQKAHEFALMETDSELD----GENNKP 681
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 164/637 (25%), Positives = 276/637 (43%), Gaps = 82/637 (12%)
Query: 17 ALLASSCRTIQQAL---QIQAHMVVTGLHHDLFLSTALISFF-ATNHRALRHSLRLFSLV 72
A L S+C + + Q+ AH + +GL D L L++F+ A N ++ S +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 73 TNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGL 132
+P WN +I ++ + FT+P ++K+CA G
Sbjct: 147 LHP--LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG 192
+H + S +++V NAL+ Y F A ++F++M RD VS+N +IN +
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 193 RAGCSMKVLGDM-----------------------------------RGFGIRPDEYTLV 217
+ G + K+L M R +R ++
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 218 TLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR 277
L ACS + + G+ H LV R D + N+L+ MY++C L A V V
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 278 NGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXX 337
++ W S++S +A E L +M ++SG+
Sbjct: 385 ANS--LSTWNSIISGFAYNERSEETSFLLKEM----------LLSGF------------- 419
Query: 338 XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYA 397
P+ + + + L AR+G L+ G+ H Y ++VDMYA
Sbjct: 420 --------HPNHITLASILPLFARVGNLQHGKEFHC-YILRRQSYKDCLILWNSLVDMYA 470
Query: 398 KCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTF 457
K G I A VF S K+ + Y S+I G G G+ A+ F++M G+ PD VT
Sbjct: 471 KSGEIIAAKRVF--DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTM 528
Query: 458 VALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP 517
VA+L AC HS LV EG F M V+G+ ++EHY C+VDL R G L +A + +P
Sbjct: 529 VAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Query: 518 FKANAVIWRALLSACKVHGDVELAKLACQE-LLAVEHDHGARYVMLSNMLADMDQHDEAA 576
++ ++ + LL AC +HG+ + + A + LL + +H Y++L++M A +
Sbjct: 589 YEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLV 648
Query: 577 SVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHP 613
+V+ + ++G+QK ++ +E + L G+ + P
Sbjct: 649 TVKTLLSDLGVQKAHEFALMETDSELD----GENNKP 681
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 148/497 (29%), Positives = 235/497 (47%), Gaps = 65/497 (13%)
Query: 124 NARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYK-----VFEQMPVRDC 178
N++T Q+H LV + H + + H YC ++ K VF + D
Sbjct: 17 NSKTLIQAKQIHAQLVINGCHDNSLFGKLIGH-YCSKPSTESSSKLAHLLVFPRFGHPD- 74
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDM--RGFGIRPDEYTLVTLLSACSSLEDQ---RVGR 233
+ N ++ + S+++ + + + +E T V +L AC+ RVGR
Sbjct: 75 ---KFLFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGR 131
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
VHG+V ++LG L ++ L+ T+L+ Y
Sbjct: 132 IVHGMV-KKLGFLYESELI---------------------------------GTTLLHFY 157
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMISGY-------SHAGYXXXXXXXXXXXXXXXMK 346
A GD+ AR++FD+M ER V+W AMI GY +H ++
Sbjct: 158 AKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVR 217
Query: 347 PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
P + +V LS ++ G LE+G +H + + A+VDMY+KCG ++ A
Sbjct: 218 PTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAF 277
Query: 407 DVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGH 466
VF K + S+ +GLA +G G L M G+ P+ +TF +LL A H
Sbjct: 278 SVF--ELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRH 335
Query: 467 SGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWR 526
GLV+EG + F+SM T +GV P +EHYGC+VDLLG+ G + EAY IL MP K +A++ R
Sbjct: 336 IGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLR 395
Query: 527 ALLSACKVHGDVELAKLACQELLAVEHD----HGAR---YVMLSNMLADMDQHDEAASVR 579
+L +AC ++G+ + + + LL +E + G+ YV LSN+LA + E +R
Sbjct: 396 SLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLR 455
Query: 580 KAIDNVGIQKPPGWSYV 596
K + I+ PG+S+V
Sbjct: 456 KEMKERRIKTRPGYSFV 472
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 155/337 (45%), Gaps = 30/337 (8%)
Query: 14 RVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHS----LRLF 69
R +LL + +T+ QA QI A +V+ G H D L LI + + S L +F
Sbjct: 9 RFLSLLQQNSKTLIQAKQIHAQLVINGCH-DNSLFGKLIGHYCSKPSTESSSKLAHLLVF 67
Query: 70 SLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTP- 128
+PD FL+N ++K P + TF ++L +CA + +
Sbjct: 68 PRFGHPDKFLFNTLLKCSK--PEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSS 125
Query: 129 --HLGLQLHCHLVKSRF-HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMI 185
+G +H + K F + + LLHFY D A KVF++MP R V++N MI
Sbjct: 126 ALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 186 NGFVRAGRAGC--SMKVLGDMRGF-----GIRPDEYTLVTLLSACSSLEDQRVGRQVHGL 238
G+ G + K + R F G+RP + T+V +LSA S +G VHG
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 239 VYRELGCLGD-NALLVNALVDMYAKCGCLELAERVVS--GVRNGKSVVAAWTSLVSAYAS 295
+ +LG + + + ALVDMY+KCGCL A V V+N V WTS+ + A
Sbjct: 246 I-EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKN----VFTWTSMATGLAL 300
Query: 296 RGDVEVARRLFDQMGERDV----VSWTAMISGYSHAG 328
G L ++M E + +++T+++S Y H G
Sbjct: 301 NGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIG 337
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 165/594 (27%), Positives = 267/594 (44%), Gaps = 52/594 (8%)
Query: 10 ASYDRVKALLASSCRTIQQALQIQA-HMVVTG--LHHDLFLSTALISFFATNHRALRHSL 66
AS +++ ++ R IQ L Q H VT L D + +T L F+A N L +
Sbjct: 2 ASQTQLRLIIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDD-LISAR 60
Query: 67 RLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANAR 126
+LF + +FLWN+II+A++ + FT+ L + + +
Sbjct: 61 KLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESF 120
Query: 127 TPHLGLQ-LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMI 185
GL+ +H + S +A++ Y A K+F +P D +N+MI
Sbjct: 121 DTK-GLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMI 179
Query: 186 NGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGC 245
G+ G + + M+ G +P+ YT+V L S V VH +
Sbjct: 180 LGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKI--N 237
Query: 246 LGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRL 305
L ++ + ALV+MY++C C+ A V
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSV--------------------------------- 264
Query: 306 FDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGAL 365
F+ + E D+V+ +++I+GYS G KPD V V L CA L
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 366 ELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILY 422
G+ +H ++ E + A++DMY+KCG + A+ +F +K + +
Sbjct: 325 VSGKEVHSYVIRLGLE-----LDIKVCSALIDMYSKCGLLKCAMSLF--AGIPEKNIVSF 377
Query: 423 NSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMST 482
NS+I GL HG A F E+ +GL+PD +TF ALLC C HSGL+++G++ FE M +
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKS 437
Query: 483 VYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAK 542
+G+ PQ EHY +V L+G G L EA+ ++++ ++ I ALLS C+VH + LA+
Sbjct: 438 EFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAE 497
Query: 543 LACQELLAVEHDHGARY-VMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSY 595
+ + + + + Y VMLSN+ A + DE +R I K PG S+
Sbjct: 498 VVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/434 (32%), Positives = 211/434 (48%), Gaps = 43/434 (9%)
Query: 165 NAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM-RGFGIRPDEYTLVTLLSAC 223
+ VF MP R+ S+N++I F R+G A S+ + M R +RPD++TL +L AC
Sbjct: 85 TSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRAC 144
Query: 224 SSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVV 283
S+ + + G +H L CL+L G + V
Sbjct: 145 SASREAKSGDLIHVL--------------------------CLKL------GFSSSLFVS 172
Query: 284 AAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXX 343
+A LV Y G + AR+LFD M RD V +TAM GY G
Sbjct: 173 SA---LVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYS 229
Query: 344 XMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHC-GQNGGFTCAVVDMYAKCGSI 402
D V +V+ L C +LGAL+ G+ +H + C G N G A+ DMY KC +
Sbjct: 230 GFALDSVVMVSLLMACGQLGALKHGKSVH-GWCIRRCSCLGLNLG--NAITDMYVKCSIL 286
Query: 403 DTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC 462
D A VF S+ + I ++S+I G G + LF+EM G+ P+ VTF+ +L
Sbjct: 287 DYAHTVFVNMSR--RDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLS 344
Query: 463 ACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANA 522
AC H GLV++ F M Y + P+++HY V D + R GLL EA + +MP K +
Sbjct: 345 ACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDE 403
Query: 523 VIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAI 582
+ A+LS CKV+G+VE+ + +EL+ ++ + YV L+ + + + DEA S+R+ +
Sbjct: 404 AVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWM 463
Query: 583 DNVGIQKPPGWSYV 596
I K PG S +
Sbjct: 464 KEKQISKVPGCSSI 477
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 160/334 (47%), Gaps = 11/334 (3%)
Query: 39 TGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXX 98
T L+ ++ LS+ L+ ++ + SL +F + ++F WN II S S +
Sbjct: 60 TFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSID 119
Query: 99 XXXXXXXXX-XXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFY 157
FT P +L++C+ +R G +H +K F S +FV++AL+ Y
Sbjct: 120 LFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY 179
Query: 158 CVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLV 217
+A K+F+ MPVRD V Y M G+V+ G A + + +M G D +V
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 218 TLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR 277
+LL AC L + G+ VHG R CLG N L NA+ DMY KC L+ A V V
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLN--LGNAITDMYVKCSILDYAHTVF--VN 295
Query: 278 NGKSVVAAWTSLVSAYASRGDVEVARRLFDQM----GERDVVSWTAMISGYSHAGYXXXX 333
+ V +W+SL+ Y GDV ++ +LFD+M E + V++ ++S +H G
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKS 355
Query: 334 XXXXXXXXXXXMKPDEVDVVAALSEC-ARLGALE 366
+ P E+ A++++C +R G LE
Sbjct: 356 WLYFRLMQEYNIVP-ELKHYASVADCMSRAGLLE 388
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 161/587 (27%), Positives = 265/587 (45%), Gaps = 61/587 (10%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
R I I +H+ + D+++ TAL+ F+A L ++++F + D+ WNA+
Sbjct: 117 RAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGE-LEMAIKVFDEMPKRDMVAWNAM 175
Query: 84 IKAHSL-----SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
I SL F FP L A G +H +
Sbjct: 176 ISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPAL----GRAGALREGKAVHGYC 231
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
+ F + + V +L Y + A +VF+ ++ V+++ MI G+V +
Sbjct: 232 TRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAG 291
Query: 199 KVLGDMRGFGIRPDEYTLVT------LLSACSSLEDQRVGRQVHGLVYRELGCLGDNALL 252
+V M + D +VT +L C+ D GR VH C A
Sbjct: 292 EVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVH--------CYAVKAGF 339
Query: 253 VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER 312
+ L+L V+N +++S YA G + A R F ++G +
Sbjct: 340 I------------LDLT------VQN---------TIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 313 DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH 372
DV+S+ ++I+G ++PD ++ L+ C+ L AL G H
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 373 LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHH 432
+ N A++DMY KCG +D A VF + K+ + +N+++ G H
Sbjct: 433 GYCVVHGY--AVNTSICNALMDMYTKCGKLDVAKRVF--DTMHKRDIVSWNTMLFGFGIH 488
Query: 433 GLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMST-VYGVNPQME 491
GLGK A++LF M+ G+ PD VT +A+L AC HSGLVDEGK+ F SMS + V P+++
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID 548
Query: 492 HYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAV 551
HY C+ DLL R G L EAY + MPF+ + + LLSAC + + EL +++ ++
Sbjct: 549 HYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL 608
Query: 552 EHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEM 598
+ V+LSN + ++ ++AA +R G+ K PG+S+V++
Sbjct: 609 -GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 192/434 (44%), Gaps = 58/434 (13%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
+T+P++LK+CA R G +H H+ S F + ++V AL+ FY + A KVF++
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE 163
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLG---DMRGF-GIRPDEYTLVTLLSACSSLED 228
MP RD V++N MI+GF C V+G DMR G+ P+ T+V + A
Sbjct: 164 MPKRDMVAWNAMISGF---SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGA 220
Query: 229 QRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTS 288
R G+ VHG R +G ++ ++ ++D+YAK C+ A RV + K W++
Sbjct: 221 LREGKAVHGYCTR-MG-FSNDLVVKTGILDVYAKSKCIIYARRVFD--LDFKKNEVTWSA 276
Query: 289 LVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPD 348
++ Y ++ A +F QM D V AM++ P
Sbjct: 277 MIGGYVENEMIKEAGEVFFQMLVNDNV---AMVT------------------------PV 309
Query: 349 EVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC------AVVDMYAKCGSI 402
+ ++ L CAR G L GR +H YA + GF ++ YAK GS+
Sbjct: 310 AIGLI--LMGCARFGDLSGGRCVHC-YAVK-------AGFILDLTVQNTIISFYAKYGSL 359
Query: 403 DTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC 462
A F + K I YNS+I+G + + + LF EMR G+ PD T + +L
Sbjct: 360 CDAFRQFSEIG--LKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLT 417
Query: 463 ACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANA 522
AC H + G V+G ++D+ + G L A + M K +
Sbjct: 418 ACSHLAALGHGSSC-HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM-HKRDI 475
Query: 523 VIWRALLSACKVHG 536
V W +L +HG
Sbjct: 476 VSWNTMLFGFGIHG 489
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 176/436 (40%), Gaps = 65/436 (14%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFH-SHVFVANALLHFYCVFRDAHNAYKVFEQM 173
F LL++C +R LG +H HL+K S V L Y + A VF+++
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 174 P--VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRV 231
P + +++++MI + A ++ + M G+RP +YT +L AC+ L
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 232 GRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVS 291
G+ +H V + + ALVD YAKCG LE+A +V
Sbjct: 122 GKLIHSHV--NCSDFATDMYVCTALVDFYAKCGELEMAIKV------------------- 160
Query: 292 AYASRGDVEVARRLFDQMGERDVVSWTAMISGYS-HAGYXXXXXXXXXXXXXXXMKPDEV 350
FD+M +RD+V+W AMISG+S H + P+
Sbjct: 161 --------------FDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLS 206
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG-----FTCAVVDMYAKCGSIDTA 405
+V R GAL G+ +H +C + G ++D+YAK I A
Sbjct: 207 TIVGMFPALGRAGALREGKAVH-------GYCTRMGFSNDLVVKTGILDVYAKSKCIIYA 259
Query: 406 LDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVA------ 459
VF KK + ++++I G + + K A +F +M LV D V V
Sbjct: 260 RRVF--DLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGL 313
Query: 460 LLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFK 519
+L C G + G + + G + ++ + G L +A+ + K
Sbjct: 314 ILMGCARFGDL-SGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 520 ANAVIWRALLSACKVH 535
+ + + +L++ C V+
Sbjct: 373 -DVISYNSLITGCVVN 387
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 247/549 (44%), Gaps = 47/549 (8%)
Query: 67 RLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXX-XXXXXXXXFTFPYLLKSCANA 125
+LF ++ D+ W+ +I+++ S T +LK+C
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 239
Query: 126 RTPHLGLQLHCHLVKSRFH-SHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMM 184
+G +H ++ F + VFV N+L+ Y D +A++VF++ R+ VS+N +
Sbjct: 240 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSI 299
Query: 185 INGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELG 244
+ GFV R ++++ M + DE T+V+LL C E + +HG++ R
Sbjct: 300 LAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR--- 356
Query: 245 CLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARR 304
R +S A +SL+ AY S V+ A
Sbjct: 357 --------------------------------RGYESNEVALSSLIDAYTSCSLVDDAGT 384
Query: 305 LFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGA 364
+ D M +DVVS + MISG +HAG P+ + V++ L+ C+
Sbjct: 385 VLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSAD 441
Query: 365 LELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNS 424
L + H A + ++VD YAKCG+I+ A F + + +K I +
Sbjct: 442 LRTSKWAH-GIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT--EKNIISWTV 498
Query: 425 IISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVY 484
IIS A +GL A+ LF+EM+ G P+ VT++A L AC H GLV +G F+SM
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM-VEE 557
Query: 485 GVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP--FKANAVIWRALLSACKVH-GDVELA 541
P ++HY C+VD+L R G + A LI N+P KA A W A+LS C+ + +
Sbjct: 558 DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIIT 617
Query: 542 KLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGA 601
E+L +E + Y++ S+ A ++ A +R+ + ++ G+S V
Sbjct: 618 SEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNL 677
Query: 602 LHKFLAGDK 610
+FLAGDK
Sbjct: 678 AKRFLAGDK 686
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 188/464 (40%), Gaps = 93/464 (20%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
F FP + K+CA S +F N++ FY D + + F+
Sbjct: 46 FVFPIVFKACAKL-------------------SWLFQGNSIADFYMKCGDLCSGLREFDC 86
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
M RD VS+N+++ G + G + +R +G P+ TLV ++ AC SL G
Sbjct: 87 MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD--G 144
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
++HG V R CG +S V+N S++
Sbjct: 145 EKIHGYVIRS------------------GFCG--------ISSVQN---------SILCM 169
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXX-XXXMKPDEVD 351
YA D AR+LFD+M ERDV+SW+ +I Y + +PD V
Sbjct: 170 YAD-SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVT 228
Query: 352 VVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC-AVVDMYAKCGSIDTALDVFC 410
V + L C + +++GR +H + F C +++DMY+K +D+A VF
Sbjct: 229 VTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV--FVCNSLIDMYSKGFDVDSAFRVFD 286
Query: 411 KTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACG----- 465
+T+ + + +NSI++G H+ A+ +F M + D VT V+LL C
Sbjct: 287 ETT--CRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQP 344
Query: 466 ------HSGLVDEGKKPFE----SMSTVYGVNPQMEHYGCVVDL---------------L 500
H ++ G + E S+ Y ++ G V+D L
Sbjct: 345 LPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGL 404
Query: 501 GRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLA 544
G EA + +M NA+ +LL+AC V D+ +K A
Sbjct: 405 AHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 448
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 200/366 (54%), Gaps = 14/366 (3%)
Query: 136 CHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAG 195
C L + V ++ + +D NA K F++MP + VS+N M++G+ + G
Sbjct: 187 CKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTE 246
Query: 196 CSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNA 255
++++ DM G+RP+E T V ++SACS D + R + L+ + L N + A
Sbjct: 247 DALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRL--NCFVKTA 304
Query: 256 LVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVV 315
L+DM+AKC ++ A R+ + + +++V W +++S Y GD+ AR+LFD M +R+VV
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLV-TWNAMISGYTRIGDMSSARQLFDTMPKRNVV 363
Query: 316 SWTAMISGYSHAGYXXXXXXXXXXXXXX-XMKPDEVDVVAALSECARLGALELGRRIHLK 374
SW ++I+GY+H G KPDEV +++ LS C + LELG I +
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCI-VD 422
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGL 434
Y +N + G+ +++ MYA+ G++ A VF + ++ + YN++ + A +G
Sbjct: 423 YIRKNQIKLNDSGYR-SLIFMYARGGNLWEAKRVFDEMK--ERDVVSYNTLFTAFAANGD 479
Query: 435 GKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYG 494
G + L +M+ G+ PD VT+ ++L AC +GL+ EG++ F+S+ NP +HY
Sbjct: 480 GVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYA 534
Query: 495 CVVDLL 500
C +DLL
Sbjct: 535 C-MDLL 539
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 188/482 (39%), Gaps = 109/482 (22%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD 177
++ C R P +L + S +VFV N++ ++ A++ +++EQ
Sbjct: 45 IISCCTRLRAPSYYTRL---IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQ----- 96
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
R+ C GI PD ++ ++ + R G
Sbjct: 97 ---------------RSRC-----------GIMPDAFSFPVVIKSAG-----RFGILFQA 125
Query: 238 LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRG 297
LV +LG D + N ++DMY K +E A +V + K + W ++S Y G
Sbjct: 126 LV-EKLGFFKD-PYVRNVIMDMYVKHESVESARKVFDQISQRKG--SDWNVMISGYWKWG 181
Query: 298 DVEVARRLFDQMGERDVVSWT-------------------------------AMISGYSH 326
+ E A +LFD M E DVVSWT AM+SGY+
Sbjct: 182 NKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQ 241
Query: 327 AGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNG 386
G+ ++P+E V +S C+ L R + +K E N
Sbjct: 242 NGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSL-VKLIDEK-RVRLNC 299
Query: 387 GFTCAVVDMYAKCGSIDTALDVFCK--TSKD----------------------------K 416
A++DM+AKC I +A +F + T ++ K
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 359
Query: 417 KTTILYNSIISGLAHHGLGKYAITLFEEMRLLG-LVPDGVTFVALLCACGHSGLVDEGKK 475
+ + +NS+I+G AH+G AI FE+M G PD VT +++L ACGH ++ G
Sbjct: 360 RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDC 419
Query: 476 PFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVH 535
+ + + Y ++ + RGG L EA + M + + V + L +A +
Sbjct: 420 IVDYIRK-NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAAN 477
Query: 536 GD 537
GD
Sbjct: 478 GD 479
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 164/604 (27%), Positives = 268/604 (44%), Gaps = 63/604 (10%)
Query: 43 HDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXX 102
++ L+ LI+ +A L ++ ++F + ++ W A+I + + N
Sbjct: 94 QNVILANFLINMYAKCGNIL-YARQVFDTMPERNVVSWTALITGYVQAGNEQ-EGFCLFS 151
Query: 103 XXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRD 162
FT +L SC G Q+H +K H ++VANA++ Y D
Sbjct: 152 SMLSHCFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCHD 207
Query: 163 ---AHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTL 219
A+ A+ VFE + ++ V++N MI F ++ V M G+ D TL
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDR---ATL 264
Query: 220 LSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNG 279
L+ CSSL + LV E+ +KC CL+L V
Sbjct: 265 LNICSSL------YKSSDLVPNEV-----------------SKC-CLQLHSLTVKSGLVT 300
Query: 280 KSVVAAWTSLVSAYASR-GDVEVARRLFDQMGE-RDVVSWTAMISGYSHAGYXXXXXXXX 337
++ VA T+L+ Y+ D +LF +M RD+V+W +I+ + A Y
Sbjct: 301 QTEVA--TALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAF--AVYDPERAIHL 356
Query: 338 X-XXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC------ 390
+ PD + L CA L IH + GGF
Sbjct: 357 FGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVI--------KGGFLADTVLNN 408
Query: 391 AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL 450
+++ YAKCGS+D + VF D + + +NS++ + HG + +F++M +
Sbjct: 409 SLIHAYAKCGSLDLCMRVF--DDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DI 463
Query: 451 VPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAY 510
PD TF+ALL AC H+G V+EG + F SM PQ+ HY CV+D+L R +EA
Sbjct: 464 NPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAE 523
Query: 511 HLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLA-VEHDHGARYVMLSNMLADM 569
+I MP +AV+W ALL +C+ HG+ L KLA +L VE + Y+ +SN+
Sbjct: 524 EVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAE 583
Query: 570 DQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGV 629
+EA K ++ ++K P S+ E+ +H+F +G + P+ +A L+ + +
Sbjct: 584 GSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWL 643
Query: 630 KSIG 633
K +G
Sbjct: 644 KEMG 647
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 21/309 (6%)
Query: 30 LQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTN-PDLFLWNAIIKAHS 88
LQ+ + V +GL ++TALI ++ +LF +++ D+ WN II A +
Sbjct: 287 LQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA 346
Query: 89 L-SPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHV 147
+ P A +TF +LK+CA T L +H ++K F +
Sbjct: 347 VYDPERAIHLFGQLRQEKLSPDW--YTFSSVLKACAGLVTARHALSIHAQVIKGGFLADT 404
Query: 148 FVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGF 207
+ N+L+H Y +VF+ M RD VS+N M+ + G+ + V M
Sbjct: 405 VLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM--- 461
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGL-VYRELGCLGDNALLVN---ALVDMYAKC 263
I PD T + LLSACS GR GL ++R + + +N ++DM ++
Sbjct: 462 DINPDSATFIALLSACS-----HAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRA 516
Query: 264 GCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE----RDVVSWTA 319
AE V+ + V W +L+ + G+ + + D++ E + +S+
Sbjct: 517 ERFAEAEEVIKQMPMDPDAV-VWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQ 575
Query: 320 MISGYSHAG 328
M + Y+ G
Sbjct: 576 MSNIYNAEG 584
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 189/442 (42%), Gaps = 68/442 (15%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRF--HSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
+ L ++CA R G+ LH H++ + +V +AN L++ Y + A +VF+
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
MP R+ VS+ +I G+V+AG + M P+E+TL ++L++C G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR----YEPG 176
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
+QVHGL + LG L + + NA++ MY +C +G + AWT
Sbjct: 177 KQVHGLALK-LG-LHCSIYVANAVISMYGRC-------------HDGAAAYEAWT----- 216
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE--- 349
+F+ + +++V+W +MI+ + + D
Sbjct: 217 ------------VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATL 264
Query: 350 VDVVAALSECARLGALELGR---RIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
+++ ++L + + L E+ + ++H ++ Q T A++ +Y++ T
Sbjct: 265 LNICSSLYKSSDLVPNEVSKCCLQLH-SLTVKSGLVTQTEVAT-ALIKVYSEMLEDYTDC 322
Query: 407 DVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGH 466
+ + +N II+ A + + AI LF ++R L PD TF ++L AC
Sbjct: 323 YKLFMEMSHCRDIVAWNGIITAFAVYDPER-AIHLFGQLRQEKLSPDWYTFSSVLKAC-- 379
Query: 467 SGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLL---------GRGGLLSEAYHLILNMP 517
+GLV + ++ Q+ G + D + + G L + +M
Sbjct: 380 AGLV--------TARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMD 431
Query: 518 FKANAVIWRALLSACKVHGDVE 539
+ + V W ++L A +HG V+
Sbjct: 432 SR-DVVSWNSMLKAYSLHGQVD 452
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 156/637 (24%), Positives = 270/637 (42%), Gaps = 73/637 (11%)
Query: 17 ALLASSCRTIQQALQIQAH--MVVTGLHHDLFLSTALISFFATNH-RALRHSLRLFSLVT 73
A+L + R + +L IQ H +V +G + +F+S +L+S + + + L+LF +
Sbjct: 186 AILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIP 245
Query: 74 NPDLFLWNAIIKAH-SLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGL 132
D+ WN ++ + +H FT LL SC ++ G
Sbjct: 246 QRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGR 305
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVS------------ 180
+LH ++ + V NAL+ FY F D ++E M +D V+
Sbjct: 306 ELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFG 365
Query: 181 -------------------YNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLS 221
YN ++ GF R G ++K+ DM G+ +++L + +
Sbjct: 366 MVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVD 425
Query: 222 ACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKS 281
AC + +++V Q+HG + G N + AL+DM +C + AE + +
Sbjct: 426 ACGLVSEKKVSEQIHGFCIK-FGT-AFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLD 483
Query: 282 VVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXX 341
A TS++ YA G + A LF R + +
Sbjct: 484 SSKATTSIIGGYARNGLPDKAVSLF----HRTLCEQKLFL-------------------- 519
Query: 342 XXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGS 401
DEV + L+ C LG E+G +IH + + G +++ MYAKC
Sbjct: 520 ------DEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLG--NSLISMYAKCCD 571
Query: 402 IDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL 461
D A+ +F + + I +NS+IS G A+ L+ M + PD +T ++
Sbjct: 572 SDDAIKIF--NTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVI 629
Query: 462 CACGH--SGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFK 519
A + S + + F SM T+Y + P EHY V +LG GLL EA I +MP +
Sbjct: 630 SAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQ 689
Query: 520 ANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVR 579
+ RALL +C++H + +AK + +L+ + + + Y++ SN+ + + +R
Sbjct: 690 PEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIR 749
Query: 580 KAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAK 616
+ + G +K P S++ +H F A D SHP+ K
Sbjct: 750 EEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEK 786
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 188/374 (50%), Gaps = 28/374 (7%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDA----HNAYK 168
+TF +L +C LG+Q+H +VKS F + VFV+N+L+ Y +D+ + K
Sbjct: 182 YTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYD--KDSGSSCDDVLK 239
Query: 169 VFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM---RGFGIRPDEYTLVTLLSACSS 225
+F+++P RD S+N +++ V+ G++ + + +M GFG+ D +TL TLLS+C+
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV--DSFTLSTLLSSCTD 297
Query: 226 LEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAA 285
GR++HG R +G + + + + NAL+ Y+K ++ E + + +V
Sbjct: 298 SSVLLRGRELHGRAIR-IGLMQELS-VNNALIGFYSKFWDMKKVESLYEMMMAQDAV--T 353
Query: 286 WTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXM 345
+T +++AY S G V+ A +F + E++ +++ A+++G+ G+ +
Sbjct: 354 FTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 346 KPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSI 402
+ + + +A+ C + ++ +IH +K+ C Q A++DM +C +
Sbjct: 414 ELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQT-----ALLDMCTRCERM 468
Query: 403 DTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLL---GLVPDGVTFVA 459
A ++F + + ++ SII G A +GL A++LF R L L D V+
Sbjct: 469 ADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFH--RTLCEQKLFLDEVSLTL 526
Query: 460 LLCACGHSGLVDEG 473
+L CG G + G
Sbjct: 527 ILAVCGTLGFREMG 540
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 159/395 (40%), Gaps = 78/395 (19%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
F YLL+ A + +H +K R + NAL+ Y A VF +
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLS 141
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG-IRPDEYTLVTLLSACSSLEDQRVGR 233
VSY +I+GF R ++KV MR G ++P+EYT V +L+AC + +G
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
Q+HGL+ + G L ++ + N+L+ +Y K +
Sbjct: 202 QIHGLIVKS-GFL-NSVFVSNSLMSLYDK----------------------------DSG 231
Query: 294 ASRGDVEVARRLFDQMGERDVVSWTAMIS-----GYSHAGYXXXXXXXXXXXXXXXMKPD 348
+S DV +LFD++ +RDV SW ++S G SH + D
Sbjct: 232 SSCDDV---LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV----D 284
Query: 349 EVDVVAALSECARLGALELGRRIH------------------LKYAAENWH--------- 381
+ LS C L GR +H + + ++ W
Sbjct: 285 SFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYE 344
Query: 382 --CGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAI 439
Q+ ++ Y G +D+A+++F + +K TI YN++++G +G G A+
Sbjct: 345 MMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT--EKNTITYNALMAGFCRNGHGLKAL 402
Query: 440 TLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
LF +M G+ + + + AC GLV E K
Sbjct: 403 KLFTDMLQRGVELTDFSLTSAVDAC---GLVSEKK 434
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 10/193 (5%)
Query: 288 SLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXM-K 346
+L+S Y G A +F + VVS+TA+ISG+S + +
Sbjct: 119 ALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQ 178
Query: 347 PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC-AVVDMYAK--CGSID 403
P+E VA L+ C R+ LG +IH + N F +++ +Y K S D
Sbjct: 179 PNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGF---LNSVFVSNSLMSLYDKDSGSSCD 235
Query: 404 TALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM-RLLGLVPDGVTFVALLC 462
L +F + ++ +N+++S L G A LF EM R+ G D T LL
Sbjct: 236 DVLKLFDEIP--QRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLS 293
Query: 463 ACGHSGLVDEGKK 475
+C S ++ G++
Sbjct: 294 SCTDSSVLLRGRE 306
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 152/585 (25%), Positives = 261/585 (44%), Gaps = 23/585 (3%)
Query: 23 CRTIQQALQIQAHMVVTGLHH-DLFLSTALISFFATNHRAL-RHSLRLFSLVTNPDLFLW 80
C ++QA Q+ A +VV +H + L + F R + + R+ D F W
Sbjct: 13 CVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSW 72
Query: 81 NAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVK 140
+++ S +L++C G +H +K
Sbjct: 73 GCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALK 132
Query: 141 SRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKV 200
+ V+V L+ Y A K F+ + ++ VS+N +++G++ +G + +V
Sbjct: 133 NGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRV 192
Query: 201 LGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMY 260
F P++ + L S + +G L + N L+ Y
Sbjct: 193 ------FDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPL----KSPASWNILIGGY 242
Query: 261 AKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAM 320
C ++LA + V +W +++S Y GDV+ A LF M ++D + + AM
Sbjct: 243 VNCREMKLARTYFDAMPQKNGV--SWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAM 300
Query: 321 ISGYSHAGYXXXXXX--XXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
I+ Y+ G ++PDE+ + + +S ++LG G + Y E
Sbjct: 301 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE-SYITE 359
Query: 379 NWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYA 438
+ + + +++D+Y K G A +F ++ +KK T+ Y+++I G +G+ A
Sbjct: 360 H-GIKIDDLLSTSLIDLYMKGGDFAKAFKMF--SNLNKKDTVSYSAMIMGCGINGMATEA 416
Query: 439 ITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVD 498
+LF M + P+ VTF LL A HSGLV EG K F SM + + P +HYG +VD
Sbjct: 417 NSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVD 475
Query: 499 LLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGAR 558
+LGR G L EAY LI +MP + NA +W ALL A +H +VE ++AC + +E D
Sbjct: 476 MLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGY 535
Query: 559 YVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALH 603
L+ + + + + D+A +VR +I + K G S+VE G+ H
Sbjct: 536 LSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE--GSYH 578
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 199/395 (50%), Gaps = 18/395 (4%)
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCL 266
F + D + L +C++ +G VH + N + AL+DMY KC +
Sbjct: 42 FALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVK--SNFLSNPFVGCALLDMYGKCLSV 99
Query: 267 ELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVV----SWTAMIS 322
A ++ + +VV W +++S Y G V+ A L++ M DV+ S+ A+I
Sbjct: 100 SHARKLFDEIPQRNAVV--WNAMISHYTHCGKVKEAVELYEAM---DVMPNESSFNAIIK 154
Query: 323 GY--SHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENW 380
G + G KP+ + ++A +S C+ +GA L + IH YA N
Sbjct: 155 GLVGTEDG-SYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIH-SYAFRNL 212
Query: 381 HCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAIT 440
+ +V+ Y +CGSI VF S + + + ++S+IS A HG + A+
Sbjct: 213 -IEPHPQLKSGLVEAYGRCGSIVYVQLVF--DSMEDRDVVAWSSLISAYALHGDAESALK 269
Query: 441 LFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLL 500
F+EM L + PD + F+ +L AC H+GL DE F+ M YG+ +HY C+VD+L
Sbjct: 270 TFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVL 329
Query: 501 GRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYV 560
R G EAY +I MP K A W ALL AC+ +G++ELA++A +ELL VE ++ A YV
Sbjct: 330 SRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYV 389
Query: 561 MLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSY 595
+L + + + +EA +R + G++ PG S+
Sbjct: 390 LLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 41/252 (16%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
F LKSCA A P LG +H H VKS F S+ FV ALL Y +A K+F+++
Sbjct: 50 VFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEI 109
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVL------------------------GDMRG--- 206
P R+ V +N MI+ + G+ ++++ G R
Sbjct: 110 PQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEF 169
Query: 207 ------FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMY 260
F +P+ TL+ L+SACS++ R+ +++H +R L + + L + LV+ Y
Sbjct: 170 YRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNL--IEPHPQLKSGLVEAY 227
Query: 261 AKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG----ERDVVS 316
+CG + + V + + V AW+SL+SAYA GD E A + F +M D ++
Sbjct: 228 GRCGSIVYVQLVFDSMEDRD--VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIA 285
Query: 317 WTAMISGYSHAG 328
+ ++ SHAG
Sbjct: 286 FLNVLKACSHAG 297
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 239/557 (42%), Gaps = 76/557 (13%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
Q+ +V G ++ L T+++ + R + + R+F + NP WN I++ +
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYG-KCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
+ T ++ +C+ + +G +H VK + V+
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 151 NALLHFYCVFRDAHNAYKVFEQ-------------------------------MPVRDCV 179
++ Y +A +VF+Q MP R+ V
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 180 SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLV 239
S+N M+ G+V A ++ L MR D TLV +L+ CS + D ++G+Q HG +
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 240 YRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDV 299
YR N ++ NAL+DMY KCG L+ A W
Sbjct: 422 YRH--GYDTNVIVANALLDMYGKCGTLQSAN--------------IW------------- 452
Query: 300 EVARRLFDQMGE-RDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSE 358
F QM E RD VSW A+++G + G KP + + L+
Sbjct: 453 ------FRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAG 505
Query: 359 CARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT 418
CA + AL LG+ IH + + + A+VDMY+KC D A++VF + + +
Sbjct: 506 CANIPALNLGKAIHGFLIRDGYKI--DVVIRGAMVDMYSKCRCFDYAIEVFKEAAT--RD 561
Query: 419 TILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFE 478
IL+NSII G +G K LF + G+ PD VTF+ +L AC G V+ G + F
Sbjct: 562 LILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFS 621
Query: 479 SMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDV 538
SMST Y ++PQ+EHY C+++L + G L + +L MPF + + AC+ +
Sbjct: 622 SMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWS 681
Query: 539 ELAKLACQELLAVEHDH 555
+L A + L+ +DH
Sbjct: 682 KLGAWAAKRLM---NDH 695
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 212/454 (46%), Gaps = 9/454 (1%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLW 80
SS + QA ++Q+H+V +FL I + + + LF + D W
Sbjct: 72 SSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCG-CVDDARELFEEMPERDGGSW 130
Query: 81 NAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVK 140
NA+I A + + +F +LKSC L QLHC +VK
Sbjct: 131 NAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVK 190
Query: 141 SRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKV 200
+ +V + +++ Y R +A +VF+++ VS+N+++ ++ G ++ +
Sbjct: 191 YGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVM 250
Query: 201 LGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMY 260
M +RP +T+ +++ ACS VG+ +H + + L + D ++ ++ DMY
Sbjct: 251 FFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVK-LSVVADT-VVSTSVFDMY 308
Query: 261 AKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAM 320
KC LE A RV R+ + +WTS +S YA G AR LFD M ER++VSW AM
Sbjct: 309 VKCDRLESARRVFDQTRSKD--LKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAM 366
Query: 321 ISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENW 380
+ GY HA D V +V L+ C+ + +++G++ H +
Sbjct: 367 LGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGY 426
Query: 381 HCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAIT 440
N A++DMY KCG++ +A +++ + + + + +N++++G+A G + A++
Sbjct: 427 D--TNVIVANALLDMYGKCGTLQSA-NIWFRQMSELRDEVSWNALLTGVARVGRSEQALS 483
Query: 441 LFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
FE M++ P T LL C + ++ GK
Sbjct: 484 FFEGMQVEA-KPSKYTLATLLAGCANIPALNLGK 516
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 182/461 (39%), Gaps = 73/461 (15%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
+ + L +SC++ ++ HLV +F+ N + Y +A ++FE+
Sbjct: 62 WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEE 121
Query: 173 MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVG 232
MP RD S+N +I + G + ++ M G+R E + +L +C + D R+
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSA 292
RQ+H V + G G N L ++VD+Y KC RV+S R
Sbjct: 182 RQLHCAVVK-YGYSG-NVDLETSIVDVYGKC-------RVMSDAR--------------- 217
Query: 293 YASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDV 352
R+FD++ VSW ++ Y G+ ++P V
Sbjct: 218 -----------RVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTV 266
Query: 353 VAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
+ + C+R ALE+G+ IH A + + +V DMY KC +++A VF +T
Sbjct: 267 SSVMLACSRSLALEVGKVIHA--IAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 413 -SKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVP------------------- 452
SKD K+ + S +SG A GL + A LF+ M +V
Sbjct: 325 RSKDLKS---WTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALD 381
Query: 453 ------------DGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLL 500
D VT V +L C V GK+ +G + + ++D+
Sbjct: 382 FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA-HGFIYRHGYDTNVIVANALLDMY 440
Query: 501 GRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELA 541
G+ G L A M + V W ALL+ G E A
Sbjct: 441 GKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 243/520 (46%), Gaps = 50/520 (9%)
Query: 117 YLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR 176
+LL+ N L QLH ++ K F S+ ++N+L+ FY +A+KVF++MP
Sbjct: 60 HLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP 119
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVH 236
D +S+N +++G+V++GR + + ++ + P+E++ L+AC+ L +G +H
Sbjct: 120 DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIH 179
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLE--------LAER--------VVSGVRNGK 280
+ + LG N ++ N L+DMY KCG ++ + E+ V S RNGK
Sbjct: 180 SKLVK-LGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGK 238
Query: 281 SVVAAW-------------TSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
+ W L+ A+ GD A ++ M + SW +++GY ++
Sbjct: 239 LELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNS 298
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG 387
++ DE + L+ A L + G IH C G
Sbjct: 299 EKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHA--------CAHKLG 350
Query: 388 F------TCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITL 441
A++DMY+KCG + A +F + +K I++N +ISG A +G AI L
Sbjct: 351 LDSRVVVASALIDMYSKCGMLKHAELMFW--TMPRKNLIVWNEMISGYARNGDSIEAIKL 408
Query: 442 FEEMRLLG-LVPDGVTFVALLCACGHSGLVDEGK-KPFESMSTVYGVNPQMEHYGCVVDL 499
F +++ L PD TF+ LL C H + E FE M Y + P +EH ++
Sbjct: 409 FNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRA 468
Query: 500 LGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAV-EHDHGAR 558
+G+ G + +A +I F + V WRALL AC D++ AK +++ + + D
Sbjct: 469 MGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEY 528
Query: 559 -YVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVE 597
Y+++SN+ A ++ E +RK + G+ K G S+++
Sbjct: 529 LYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 144/345 (41%), Gaps = 68/345 (19%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
Q+ ++ G + LS +L+ F+ T+ +L + ++F + +PD+ WN+++ + S
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSD-SLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHS-HVFV 149
F+F L +CA LG +H LVK +V V
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 150 ANALLHFY--CVFRD------AHNAYK-----------------------VFEQMPVRDC 178
N L+ Y C F D H K F QMP D
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDT 254
Query: 179 VSYNMMINGFVRAGRAGCSMKVLGDM------------RGF------------------- 207
V+YN +I+ FV++G + +VL DM G+
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS 314
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
G+R DEY+L +L+A ++L G +H ++ LG L ++ +AL+DMY+KCG L+
Sbjct: 315 GVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHK-LG-LDSRVVVASALIDMYSKCGMLK 372
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER 312
AE + + +V W ++S YA GD A +LF+Q+ +
Sbjct: 373 HAELMFWTMPRKNLIV--WNEMISGYARNGDSIEAIKLFNQLKQE 415
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 203/409 (49%), Gaps = 27/409 (6%)
Query: 117 YLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR 176
Y L++C+N Q+H ++K + + L+ F + A VF Q+
Sbjct: 25 YFLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 177 DCVSYNMMINGFV--RAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQ 234
++N+MI R + +L M + D++T ++ AC + R+G Q
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILM-MISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
VHGL + G D N L+D+Y KCG + +V + G+S+V+ WT+++
Sbjct: 141 VHGLAIKA-GFFND-VFFQNTLMDLYFKCGKPDSGRKVFDKMP-GRSIVS-WTTMLYGLV 196
Query: 295 SRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVA 354
S ++ A +F+QM R+VVSWTAMI+ Y +KP+E +V
Sbjct: 197 SNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVN 256
Query: 355 ALSECARLGALELGRRIHLKYAAENWHCGQNGGFT------CAVVDMYAKCGSIDTALDV 408
L +LG+L +GR +H YA +N GF A++DMY+KCGS+ A V
Sbjct: 257 LLQASTQLGSLSMGRWVH-DYAHKN-------GFVLDCFLGTALIDMYSKCGSLQDARKV 308
Query: 409 FCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLV-PDGVTFVALLCACGHS 467
F K+ +NS+I+ L HG G+ A++LFEEM V PD +TFV +L AC ++
Sbjct: 309 F--DVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANT 366
Query: 468 GLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM 516
G V +G + F M VYG++P EH C++ LL + + +A +L+ +M
Sbjct: 367 GNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 46/346 (13%)
Query: 22 SCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWN 81
+C Q QI ++ L +D L LIS +++ +++ +F+ + +P F WN
Sbjct: 29 TCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISV-SSSFGETQYASLVFNQLQSPSTFTWN 87
Query: 82 AIIKAHSLSPNHAFXXXXXXXXXXX---XXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
+I+ SLS NH FTFP+++K+C + + LG Q+H
Sbjct: 88 LMIR--SLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 139 VKSRFHSHVFVANAL--LHFYCVFRDA-----------------------------HNAY 167
+K+ F + VF N L L+F C D+ +A
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 168 KVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLE 227
VF QMP+R+ VS+ MI +V+ R + ++ M+ ++P+E+T+V LL A + L
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 228 DQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWT 287
+GR VH ++ L + L AL+DMY+KCG L+ A +V V GKS +A W
Sbjct: 266 SLSMGRWVHDYAHKNGFVL--DCFLGTALIDMYSKCGSLQDARKVFD-VMQGKS-LATWN 321
Query: 288 SLVSAYASRGDVEVARRLFDQMG-----ERDVVSWTAMISGYSHAG 328
S++++ G E A LF++M E D +++ ++S ++ G
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTG 367
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 233/495 (47%), Gaps = 65/495 (13%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
TF +L +C+ P G Q+H ++K + AL+ Y + ++ +VFE +
Sbjct: 86 TFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESV 145
Query: 174 PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
+D VS+N +++GF+R G+ ++ V M + E+TL +++ C+SL+ + G+
Sbjct: 146 EEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGK 205
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAY 293
QVH +V V G+ +V T+++S Y
Sbjct: 206 QVHAMV------------------------------------VVTGRDLVVLGTAMISFY 229
Query: 294 ASRGDVEVARRLFDQMG-ERDVVSWTAMISG-YSHAGYXXXXXXXXXXXXXXXMKPDEVD 351
+S G + A ++++ + D V ++ISG + Y +P+
Sbjct: 230 SSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR------QRPNVRV 283
Query: 352 VVAALSECARLGALELGRRIHL-----KYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
+ ++L+ C+ L +G++IH + +++ C NG ++DMY KCG I A
Sbjct: 284 LSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC--NG-----LMDMYGKCGQIVQAR 336
Query: 407 DVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEM--RLLGLVPDGVTFVALLCAC 464
+F + K+ + + S+I A +G G A+ +F EM G++P+ VTF+ ++ AC
Sbjct: 337 TIF--RAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISAC 394
Query: 465 GHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANA-- 522
H+GLV EGK+ F M Y + P EHY C +D+L + G E + L+ M N
Sbjct: 395 AHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSI 454
Query: 523 --VIWRALLSACKVHGDVELAKLACQELL-AVEHDHGARYVMLSNMLADMDQHDEAASVR 579
IW A+LSAC ++ D+ + + L+ ++ + YV++SN A M + D +R
Sbjct: 455 PCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELR 514
Query: 580 KAIDNVGIQKPPGWS 594
+ N G+ K G S
Sbjct: 515 GKLKNKGLVKTAGHS 529
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 149/323 (46%), Gaps = 28/323 (8%)
Query: 21 SSCRTIQQALQIQAHMVVTGLHHDLF-LSTALISFFATNHRALRHSLRLF-SLVTNPDLF 78
+S + +QQ Q+ A +VVTG DL L TA+ISF+++ + +++++ SL + D
Sbjct: 196 ASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVG-LINEAMKVYNSLNVHTDEV 252
Query: 79 LWNAIIKAHSLSPNH--AFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHC 136
+ N++I + N+ AF L C++ +G Q+HC
Sbjct: 253 MLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSS-------LAGCSDNSDLWIGKQIHC 305
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC 196
+++ F S + N L+ Y A +F +P + VS+ MI+ + G
Sbjct: 306 VALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVK 365
Query: 197 SMKVLGDM--RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN 254
++++ +M G G+ P+ T + ++SAC+ + G++ G++ + + V
Sbjct: 366 ALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV- 424
Query: 255 ALVDMYAKCGCLE----LAERVVSGVRNGKSVVAAWTSLVSAYA-----SRGDVEVARRL 305
+D+ +K G E L ER++ N A W +++SA + +RG+ VARRL
Sbjct: 425 CFIDILSKAGETEEIWRLVERMMEN-DNQSIPCAIWVAVLSACSLNMDLTRGEY-VARRL 482
Query: 306 FDQMGERDVVSWTAMISGYSHAG 328
++ G + + + + Y+ G
Sbjct: 483 MEETGPENASIYVLVSNFYAAMG 505
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 12/234 (5%)
Query: 302 ARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECAR 361
A LFD++ +RD+ S + +S + +G L C+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 362 LGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT 418
L E GR++H +K AE + A++DMY+K G + ++ VF S ++K
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKT-----ALIDMYSKYGHLVDSVRVF--ESVEEKD 149
Query: 419 TILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFE 478
+ +N+++SG +G GK A+ +F M + T +++ C ++ +GK+
Sbjct: 150 LVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQ-VH 208
Query: 479 SMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSAC 532
+M V G + + ++ GL++EA + ++ + V+ +L+S C
Sbjct: 209 AMVVVTGRDLVVLGTA-MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 220/495 (44%), Gaps = 54/495 (10%)
Query: 26 IQQALQIQAHMVVTGLHHDLFLSTALIS-FFATNHRALRHSLRLFSLVTNPDLFLWNAII 84
++Q L+ A + GL + +FL T+L+ +F L + R+F + D+ +W A+I
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGL--ARRVFDEIVERDIVVWGAMI 287
Query: 85 K--AHSLSPNHA---FXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
AH+ A F P L + + LG ++H H++
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVL----GDVKALKLGKEVHAHVL 343
Query: 140 KSR-FHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
KS+ + FV + L+ YC D + +VF R+ +S+ +++G+ GR ++
Sbjct: 344 KSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQAL 403
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
+ + M+ G RPD T+ T+L C+ L + G+++H + L N LV +L+
Sbjct: 404 RSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL--FLPNVSLVTSLMV 461
Query: 259 MYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWT 318
MY+KCG E RLFD++ +R+V +WT
Sbjct: 462 MYSKCGV---------------------------------PEYPIRLFDRLEQRNVKAWT 488
Query: 319 AMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
AMI Y +PD V + L+ C+ L AL+LG+ +H +
Sbjct: 489 AMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKK 548
Query: 379 NWHCGQNGGFTCA-VVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKY 437
+ ++ F A ++ MY KCG + +A F + K ++ + +II + L +
Sbjct: 549 EF---ESIPFVSARIIKMYGKCGDLRSA--NFSFDAVAVKGSLTWTAIIEAYGCNELFRD 603
Query: 438 AITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
AI FE+M G P+ TF A+L C +G VDE + F M +Y + P EHY V+
Sbjct: 604 AINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVI 663
Query: 498 DLLGRGGLLSEAYHL 512
+LL R G + EA L
Sbjct: 664 ELLNRCGRVEEAQRL 678
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 217/516 (42%), Gaps = 68/516 (13%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
Q+ H+ + GL + FL T L+ + T +++ + ++F T+ +++ WNA+++ +S
Sbjct: 132 QVHVHIRINGLESNEFLRTKLVHMY-TACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 91 PNHAFXXXXXXXXXXXX--XXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVF 148
+ ++ + KS A A GL+ H +K+ + VF
Sbjct: 191 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF 250
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM-RGF 207
+ +L+ Y A +VF+++ RD V + MI G R ++ + M
Sbjct: 251 LKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE 310
Query: 208 GIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLE 267
I P+ L T+L ++ ++G++VH V + + + + + L+D+Y KCG +
Sbjct: 311 KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYV-EQPFVHSGLIDLYCKCGDMA 369
Query: 268 LAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHA 327
RV G + ++ +WT+L+S YA+ G FDQ R +V W
Sbjct: 370 SGRRVFYGSKQRNAI--SWTALMSGYAANGR-------FDQ-ALRSIV-WM------QQE 412
Query: 328 GYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGG 387
G+ +PD V + L CA L A++ G+ IH YA +N N
Sbjct: 413 GF----------------RPDVVTIATVLPVCAELRAIKQGKEIHC-YALKNLFL-PNVS 454
Query: 388 FTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRL 447
+++ MY+KCG + + +F + +++ + ++I + + I +F M L
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRL--EQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLL 512
Query: 448 LGLVPDGVTFVALLCACGHSGLVDEG--------KKPFESMSTVYGVNPQMEHYGCVVDL 499
PD VT +L C + G KK FES+ V ++ +
Sbjct: 513 SKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAR---------IIKM 563
Query: 500 LGRGGLLSEAYHLILNMPFKANAV----IWRALLSA 531
G+ G L A N F A AV W A++ A
Sbjct: 564 YGKCGDLRSA-----NFSFDAVAVKGSLTWTAIIEA 594
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 159/365 (43%), Gaps = 41/365 (11%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
TF LL++C ++ G Q+H H+ + S+ F+ L+H Y +A KVF++
Sbjct: 113 TFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDES 172
Query: 174 PVRDCVSYNMMINGFVRAGRAGCS--MKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRV 231
+ S+N ++ G V +G+ + +MR G+ + Y+L + + + R
Sbjct: 173 TSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 232 GRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVS 291
G + H L + L ++ L +LVDMY KCG
Sbjct: 233 GLKTHALAIK--NGLFNSVFLKTSLVDMYFKCG--------------------------- 263
Query: 292 AYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYX-XXXXXXXXXXXXXXMKPDEV 350
V +ARR+FD++ ERD+V W AMI+G +H + P+ V
Sbjct: 264 ------KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSV 317
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC 410
+ L + AL+LG+ +H + ++ + + ++D+Y KCG + + VF
Sbjct: 318 ILTTILPVLGDVKALKLGKEVH-AHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFY 376
Query: 411 KTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLV 470
+ ++ I + +++SG A +G A+ M+ G PD VT +L C +
Sbjct: 377 GSK--QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAI 434
Query: 471 DEGKK 475
+GK+
Sbjct: 435 KQGKE 439
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 106/255 (41%), Gaps = 14/255 (5%)
Query: 24 RTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAI 83
R I+Q +I + + ++ L T+L+ ++ + +RLF + ++ W A+
Sbjct: 432 RAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG-VPEYPIRLFDRLEQRNVKAWTAM 490
Query: 84 IKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
I + + + T +L C++ + LG +LH H++K F
Sbjct: 491 IDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF 550
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGC------S 197
S FV+ ++ Y D +A F+ + V+ +++ +I + GC +
Sbjct: 551 ESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAY------GCNELFRDA 604
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALV 257
+ M G P+ +T +LS CS + L+ R + L + + ++
Sbjct: 605 INCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLR-MYNLQPSEEHYSLVI 663
Query: 258 DMYAKCGCLELAERV 272
++ +CG +E A+R+
Sbjct: 664 ELLNRCGRVEEAQRL 678
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 142/551 (25%), Positives = 249/551 (45%), Gaps = 51/551 (9%)
Query: 62 LRHSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKS 121
L ++L LF + D+ WN +I H + FTF L
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 122 CANARTPHLGLQLHCHLVKSRFHSH-VFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVS 180
R G Q+H + + S + + V N+++ Y A VF M RD VS
Sbjct: 146 VTCVRH---GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 181 YNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVY 240
+N +I +G ++ MR I+PDEYT+ ++S CS L + G+Q L
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCI 262
Query: 241 RELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVE 300
+ +G L N++++ A +DM++KC L+ + ++ + SV+ S++ +Y+ E
Sbjct: 263 K-MGFLS-NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC--NSMIGSYSWHCCGE 318
Query: 301 VARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECA 360
A RLF ++PD+ + LS
Sbjct: 319 DALRLF-------------------------------ILAMTQSVRPDKFTFSSVLSSMN 347
Query: 361 RLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKK 417
+ L+ G +H +K + + ++++MY K GS+D A+ VF KT D K
Sbjct: 348 AV-MLDHGADVHSLVIKLGFD-----LDTAVATSLMEMYFKTGSVDLAMGVFAKT--DGK 399
Query: 418 TTILYNSIISGLAHHGLGKYAITLFEEMRL-LGLVPDGVTFVALLCACGHSGLVDEGKKP 476
I +N++I GLA + ++ +F ++ + L PD VT + +L AC ++G V+EG +
Sbjct: 400 DLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQI 459
Query: 477 FESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
F SM +GVNP EHY C+++LL R G+++EA + +PF+ ++ IW +L A G
Sbjct: 460 FSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLG 519
Query: 537 DVELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYV 596
D LA+ + +L E Y++L + + + + +R A++ ++ G S +
Sbjct: 520 DTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKI 579
Query: 597 EMNGALHKFLA 607
+ ++ F A
Sbjct: 580 SIESSVFSFEA 590
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 134/326 (41%), Gaps = 22/326 (6%)
Query: 254 NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD 313
N + +Y K G + A ++ + + ++ W + G + A LFD+M ERD
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTI--TWNVCLKGLFKNGYLNNALDLFDEMPERD 100
Query: 314 VVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE--VDVVAALSECARLGALELGRRI 371
VVSW MISG G+ ++P E ++A+L C R G G I
Sbjct: 101 VVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAI 160
Query: 372 ---HLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISG 428
+Y W+ +V+DMY + G D AL VF + + + + +N +I
Sbjct: 161 CSGVSRYNLVVWN---------SVMDMYRRLGVFDYALSVF--LTMEDRDVVSWNCLILS 209
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNP 488
+ G + A+ F MR + + PD T ++ C + +GK+ ++ G
Sbjct: 210 CSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL-ALCIKMGFLS 268
Query: 489 QMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVH--GDVELAKLACQ 546
G +D+ + L ++ L + K ++V+ +++ + H G+ L
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWHCCGEDALRLFILA 327
Query: 547 ELLAVEHDHGARYVMLSNMLADMDQH 572
+V D +LS+M A M H
Sbjct: 328 MTQSVRPDKFTFSSVLSSMNAVMLDH 353
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 114/296 (38%), Gaps = 5/296 (1%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLF 78
+ S R + + Q A + G + + A I F+ +R L S++LF + D
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNR-LDDSVKLFRELEKWDSV 302
Query: 79 LWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
L N++I ++S FTF +L S H G +H +
Sbjct: 303 LCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDH-GADVHSLV 361
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSM 198
+K F VA +L+ Y A VF + +D + +N +I G R RA S+
Sbjct: 362 IKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESL 421
Query: 199 KVLGDM-RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALV 257
+ + ++PD TL+ +L AC G Q+ + + G N ++
Sbjct: 422 AIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYA-CII 480
Query: 258 DMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD 313
++ + G + A+ + + S W ++ A GD +A + M E +
Sbjct: 481 ELLCRVGMINEAKDIADKIPFEPS-SHIWEPILCASLDLGDTRLAETVAKTMLESE 535
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 210/483 (43%), Gaps = 15/483 (3%)
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRA 191
Q+H L+ S A LL F D+ ++ + C N + ++ +
Sbjct: 39 FQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCA--NPVFKAYLVS 96
Query: 192 GRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNAL 251
++ D+ FG PD YT V+L+S G+ HG + GC D L
Sbjct: 97 SSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKH-GC--DQVL 153
Query: 252 LV-NALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG 310
V N+L+ MY CG L+LA+++ V K + +W S+++ GDV A +LFD+M
Sbjct: 154 PVQNSLMHMYTCCGALDLAKKLF--VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMP 211
Query: 311 ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR 370
+++++SW MIS Y A + +E +V L+ C R L+ GR
Sbjct: 212 DKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRS 271
Query: 371 IHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLA 430
+H + A++DMY KC + A +F S K T +N +I
Sbjct: 272 VHASLIRT--FLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVT--WNVMILAHC 327
Query: 431 HHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQM 490
HG + + LFE M L PD VTFV +LC C +GLV +G+ + M + + P
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNF 387
Query: 491 EHYGCVVDLLGRGGLLSEAYHLILNMP---FKANAVIWRALLSACKVHGDVELAKLACQE 547
H C+ +L G EA + N+P + W LLS+ + G+ L + +
Sbjct: 388 GHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKS 447
Query: 548 LLAVEHDHGARYVMLSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLA 607
L+ + + Y +L N+ + + ++ VR+ + I + PG V++ +H
Sbjct: 448 LIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRL 507
Query: 608 GDK 610
G K
Sbjct: 508 GCK 510
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 155/432 (35%), Gaps = 71/432 (16%)
Query: 19 LASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLF 78
L +I Q+ A ++ +G D S+ I ++ R S + + L+
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWD---SSWAIRLLKSSSRFGDSSYTVSIYRSIGKLY 84
Query: 79 LWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHL 138
N + KA+ +S + +TF L+ G H
Sbjct: 85 CANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQA 144
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG------ 192
+K + V N+L+H Y A K+F ++P RD VS+N +I G VR G
Sbjct: 145 IKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAH 204
Query: 193 -------------------------RAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLE 227
G S+ + +M G + +E TLV LL+AC
Sbjct: 205 KLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSA 264
Query: 228 DQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWT 287
+ GR VH + R L + ++ AL+DMY KC
Sbjct: 265 RLKEGRSVHASLIRTF--LNSSVVIDTALIDMYGKC------------------------ 298
Query: 288 SLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKP 347
+V +ARR+FD + R+ V+W MI + G ++P
Sbjct: 299 ---------KEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRP 349
Query: 348 DEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALD 407
DEV V L CAR G + G+ + + + N G + ++Y+ G + A +
Sbjct: 350 DEVTFVGVLCGCARAGLVSQGQS-YYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEE 408
Query: 408 VFCKTSKDKKTT 419
K D+ T
Sbjct: 409 AL-KNLPDEDVT 419
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 122/291 (41%), Gaps = 4/291 (1%)
Query: 29 ALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHS 88
AL + + V D+ ++I+ N L + +LF + + ++ WN +I A+
Sbjct: 168 ALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL-AAHKLFDEMPDKNIISWNIMISAYL 226
Query: 89 LSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVF 148
+ N T LL +C + G +H L+++ +S V
Sbjct: 227 GANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV 286
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFG 208
+ AL+ Y ++ A ++F+ + +R+ V++N+MI GR +++ M
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 209 IRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLEL 268
+RPDE T V +L C+ G+ + L+ E + N + ++Y+ G E
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ-IKPNFGHQWCMANLYSSAGFPEE 405
Query: 269 AERVVSGVRNGKSVVAA--WTSLVSAYASRGDVEVARRLFDQMGERDVVSW 317
AE + + + + W +L+S+ G+ + + + E D +++
Sbjct: 406 AEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNY 456
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 196/454 (43%), Gaps = 45/454 (9%)
Query: 31 QIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTNPDLFLWNAIIKAHSLS 90
Q+ +MV G+ +L + ++L+ F+A L +LR F ++ D+ W A+I A S
Sbjct: 205 QVHGNMVKVGVG-NLIVESSLVYFYAQCGE-LTSALRAFDMMEEKDVISWTAVISACSRK 262
Query: 91 PNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVA 150
+ FT +LK+C+ + G Q+H +VK + VFV
Sbjct: 263 GHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVG 322
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
+L+ Y + + KVF+ M R+ V++ +I R G ++ + M+ +
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382
Query: 211 PDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAE 270
+ T+V++L AC S+ +G+++H + + + N + + LV +Y KCG
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIK--NSIEKNVYIGSTLVWLYCKCG------ 434
Query: 271 RVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYX 330
SR A + Q+ RDVVSWTAMISG S G+
Sbjct: 435 -----------------------ESRD----AFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 331 XXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC 390
++P+ +AL CA +L +GR IH A +N H N
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIH-SIAKKN-HALSNVFVGS 525
Query: 391 AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL 450
A++ MYAKCG + A VF S +K + + ++I G A +G + A+ L M G
Sbjct: 526 ALIHMYAKCGFVSEAFRVF--DSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583
Query: 451 VPDGVTFVALLCACGHSGLVDEGKKPFESMSTVY 484
D F +L CG L DE ES +T Y
Sbjct: 584 EVDDYIFATILSTCGDIEL-DEA---VESSATCY 613
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 183/406 (45%), Gaps = 45/406 (11%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVSYNMMINGFVRAG 192
++H +K ++ N L+ D A KVF+ MP ++ V++ MI+G+++ G
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 193 RAGCSMKVLGDMRGFGIR-PDEYTLVTLLSACSSLEDQRVGRQVHG-LVYRELGCLGDNA 250
+ + D GIR +E V LL+ CS + +GRQVHG +V +G N
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG----NL 218
Query: 251 LLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMG 310
++ ++LV YA+C G++ A R FD M
Sbjct: 219 IVESSLVYFYAQC---------------------------------GELTSALRAFDMME 245
Query: 311 ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR 370
E+DV+SWTA+IS S G+ P+E V + L C+ AL GR+
Sbjct: 246 EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ 305
Query: 371 IHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLA 430
+H G +++DMYAKCG I VF S + T+ + SII+ A
Sbjct: 306 VHSLVVKRMIKTDVFVG--TSLMDMYAKCGEISDCRKVFDGMS--NRNTVTWTSIIAAHA 361
Query: 431 HHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQM 490
G G+ AI+LF M+ L+ + +T V++L ACG G + GK+ + + +
Sbjct: 362 REGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKE-LHAQIIKNSIEKNV 420
Query: 491 EHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHG 536
+V L + G +A++++ +P + + V W A++S C G
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGCSSLG 465
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 198/418 (47%), Gaps = 48/418 (11%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
F LL C+ LG Q+H ++VK ++ V ++L++FY + +A + F+ M
Sbjct: 187 FVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMME 245
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQ 234
+D +S+ +I+ R G ++ + M P+E+T+ ++L ACS + R GRQ
Sbjct: 246 EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ 305
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
VH LV + + + + + +L+DMYAKCG + +V G+ N +V WTS+++A+A
Sbjct: 306 VHSLVVKRM--IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVT--WTSIIAAHA 361
Query: 295 SRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVA 354
G E A LF M R +++ + + VV+
Sbjct: 362 REGFGEEAISLFRIMKRRHLIA-------------------------------NNLTVVS 390
Query: 355 ALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSK 414
L C +GAL LG+ +H + + +N +V +Y KCG A +V +
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIE--KNVYIGSTLVWLYCKCGESRDAFNVLQQLP- 447
Query: 415 DKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
+ + + ++ISG + G A+ +EM G+ P+ T+ + L AC +S + G+
Sbjct: 448 -SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGR 506
Query: 475 KPFESMSTVYGVNPQMEHY---GCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALL 529
S+ ++ N + + ++ + + G +SEA+ + +MP K N V W+A++
Sbjct: 507 ----SIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEK-NLVSWKAMI 559
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 129/277 (46%), Gaps = 19/277 (6%)
Query: 359 CARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT 418
C L+ + +H K +A H + +++MY+ CG + A VF K S+
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHV--LLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 419 TILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFE 478
T + II A +G G+ AI +F + G +PDG F + ACG G VDEG FE
Sbjct: 322 T--WCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFE 379
Query: 479 SMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDV 538
SMS YG+ P +E Y +V++ G L EA + MP + N +W L++ +VHG++
Sbjct: 380 SMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNL 439
Query: 539 ELAKLACQELLAVEHDHGARYVMLSNMLADMDQHDEAASVRKA--IDNVGIQKPPGWSYV 596
EL D+ A V + Q E KA ++ ++K G +
Sbjct: 440 ELG------------DYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGILH- 486
Query: 597 EMNGALHKFLAGDKSHPEAKATELMLRDINMGVKSIG 633
+ ++ +F AGD + PE +LR++ M + +G
Sbjct: 487 GVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVG 523
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 5/191 (2%)
Query: 359 CARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT 418
C + ALE R +H A C + G A+++MY+ C S+D AL VF + +
Sbjct: 129 CGKPEALEAARVVHECIIALVSPC--DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSG 186
Query: 419 TILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFE 478
T+ ++ ++G G+ AI LF + G P+G F + C +G V EG F+
Sbjct: 187 TLCV--MMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQ 244
Query: 479 SMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVHGDV 538
+M YG+ P MEHY V +L G L EA + + MP + + +W L++ +VHGDV
Sbjct: 245 AMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDV 304
Query: 539 ELAKLACQELL 549
EL C EL+
Sbjct: 305 ELGD-RCAELV 314
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 6/207 (2%)
Query: 347 PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
PD V CA L +LE +++H + + + V+ M+ +C SI A
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRG--DPKLNNMVISMFGECSSITDAK 291
Query: 407 DVFCK-TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACG 465
VF KD + ++ ++ + +G+G A+ LFEEM GL P+ TF+ + AC
Sbjct: 292 RVFDHMVDKDMDS---WHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACA 348
Query: 466 HSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIW 525
G ++E F+SM +G++P+ EHY V+ +LG+ G L EA I ++PF+ A W
Sbjct: 349 TVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFW 408
Query: 526 RALLSACKVHGDVELAKLACQELLAVE 552
A+ + ++HGD++L + ++ V+
Sbjct: 409 EAMRNYARLHGDIDLEDYMEELMVDVD 435
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
F L +SCAN ++ ++H H ++S+F + N ++ + +A +VF+ M
Sbjct: 239 FVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMV 298
Query: 175 VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSS---LEDQRV 231
+D S+++M+ + G ++ + +M G++P+E T +T+ AC++ +E+ +
Sbjct: 299 DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFL 358
Query: 232 G----RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWT 287
+ HG+ + LG ++ + KCG L AE+ + + + W
Sbjct: 359 HFDSMKNEHGISPKTEHYLG--------VLGVLGKCGHLVEAEQYIRDL-PFEPTADFWE 409
Query: 288 SLVSAYASRGDVEVARRLFDQMGERD 313
++ + GD+++ + + M + D
Sbjct: 410 AMRNYARLHGDIDLEDYMEELMVDVD 435
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 391 AVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL 450
++++MY+ CGS++ AL VF S ++ + +I A +G G+ AI F + G
Sbjct: 221 SIIEMYSGCGSVEDALTVF--NSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN 278
Query: 451 VPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAY 510
PDG F + ACG G ++EG FESM YG+ P MEHY +V +L G L EA
Sbjct: 279 KPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEAL 338
Query: 511 HLILNMPFKANAVIWRALLSACKVHGDVELAKLACQELLAVEHDHGARYVMLSNMLADMD 570
+ +M + N +W L++ +VHGD+ L CQ++ VE +R S A +
Sbjct: 339 RFVESM--EPNVDLWETLMNLSRVHGDLILGD-RCQDM--VEQLDASRLNKESK--AGLV 391
Query: 571 QHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGVK 630
+ V++ + + K P N + AGD S PE + + L+ + +
Sbjct: 392 PVKSSDLVKEKLQRMA--KGP-------NYGIRYMAAGDISRPENRELYMALKSLKEHMI 442
Query: 631 SIG 633
IG
Sbjct: 443 EIG 445
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 4/197 (2%)
Query: 117 YLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR 176
++ + C +A+ +H + S S + N+++ Y +A VF MP R
Sbjct: 186 WIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPER 245
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVH 236
+ ++ +I F + G+ ++ + G +PD + AC L D G
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHF 305
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASR 296
+Y+E G + V +LV M A+ G L+ A R V + + V W +L++
Sbjct: 306 ESMYKEYGIIPCMEHYV-SLVKMLAEPGYLDEALRFVESM---EPNVDLWETLMNLSRVH 361
Query: 297 GDVEVARRLFDQMGERD 313
GD+ + R D + + D
Sbjct: 362 GDLILGDRCQDMVEQLD 378
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 116/264 (43%), Gaps = 36/264 (13%)
Query: 359 CARLGALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD 415
C + ALE R +H A ++H V++MY+ C S D AL+VF + K
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSYH---------TVIEMYSGCRSTDDALNVFNEMPKR 172
Query: 416 KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKK 475
T + ++I LA +G G+ AI +F G PD F A+ AC G ++EG
Sbjct: 173 NSET--WGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLL 230
Query: 476 PFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLSACKVH 535
FESM YG+ ME Y V+++L G L EA + M + + +W L++ C V
Sbjct: 231 HFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQ 290
Query: 536 GDVELAKLACQELLAVEHDHGARYVMLSNML--ADMDQHDEAASVRKAIDNVGIQKPPGW 593
G +EL G R+ L L + M + A V + ++K
Sbjct: 291 GYLEL---------------GDRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKEL 335
Query: 594 SYVEM-----NGALHKFLAGDKSH 612
Y +M +H+F AGD SH
Sbjct: 336 RYCQMIRDDPKKRMHEFRAGDTSH 359
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 122/537 (22%), Positives = 204/537 (37%), Gaps = 74/537 (13%)
Query: 75 PDLFLWNAIIKAHSLSP-NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQ 133
P + +NA++ A S N +F FT+ L++ A + L
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFV 189
L + +V N L+ YC R + +K+ M ++ + +SYN++ING
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 190 RAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDN 249
R GR VL +M G DE T TL+ + +H + R L +
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH--GLTPS 344
Query: 250 ALLVNALVDMYAKCGCLELAERVVSGVR------NGKSVVAAWTSLVSAYASRGDVEVAR 303
+ +L+ K G + A + +R N ++ +T+LV ++ +G + A
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT----YTTLVDGFSQKGYMNEAY 400
Query: 304 RLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSEC 359
R+ +M + VV++ A+I+G+ G + PD V LS
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS-- 458
Query: 360 ARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KK 417
GF C D +D AL V + + K
Sbjct: 459 ---------------------------GF-CRSYD-------VDEALRVKREMVEKGIKP 483
Query: 418 TTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPF 477
TI Y+S+I G K A L+EEM +GL PD T+ AL+ A G +++ +
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 478 ESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANA---VIWRALLSAC-- 532
M GV P + Y +++ L + EA L+L + ++ + V + L+ C
Sbjct: 544 NEM-VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 533 -KVHGDVELAKLACQELLAVEHDHGARYVMLSNMLAD-------MDQHDEAASVRKA 581
+ V L K C + + E D ++ N D + H A +RKA
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 172/436 (39%), Gaps = 59/436 (13%)
Query: 124 NARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC----V 179
N+ L L+ +LV + H N+++ F C A + MP C +
Sbjct: 33 NSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVI 92
Query: 180 SYNMMINGFVRAGRAGCSMKVLGDMR---GFGIRPDEYTLVTLLSACSSLEDQRVGRQVH 236
SYN +I+G R G + VL +R GF +PD + +L + S + ++ +V
Sbjct: 93 SYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKM---KMLDEVF 149
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNG--KSVVAAWTSLVSAYA 294
+ L C N + + +D + K G L+LA + ++ V +T L+ Y
Sbjct: 150 VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC 209
Query: 295 SRGDVEVARRLFDQMGE----RDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEV 350
GD+EVA L+ +M +VV++TA+I G+ G ++P+
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNS- 268
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC 410
L Y ++D + + G D A+
Sbjct: 269 ----------------------LVYT--------------TIIDGFFQRGDSDNAMKFLA 292
Query: 411 KTSKD--KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSG 468
K + Y IISGL +G K A + E+M LVPD V F ++ A SG
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 469 LVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRAL 528
+ + + G P + ++D + + G L EA ++ KAN V++ L
Sbjct: 353 RMKAAVNMYHKL-IERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEKANDVMYTVL 409
Query: 529 LSACKVHGD-VELAKL 543
+ A GD +E+ +L
Sbjct: 410 IDALCKEGDFIEVERL 425
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 149/386 (38%), Gaps = 59/386 (15%)
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVH 236
+ V+Y+ I+ F ++G ++K M+ + P+ T L+ D V ++
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAE----RVVSGVRNGKSVVAAWTSLVSA 292
+ R L N + AL+D + K G ++ AE R+V S+V +T+++
Sbjct: 222 KEMRRVRMSL--NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLV--YTTIIDG 277
Query: 293 YASRGDVEVARRLFDQM---GER-DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPD 348
+ RGD + A + +M G R D+ ++ +ISG G + PD
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 349 EVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVV------DMYAKCGSI 402
V ++ + G +K A +H GF VV D AK G +
Sbjct: 338 MVIFTTMMNAYFKSG--------RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 403 DTALDVFC-KTSKDKKTTIL-------------------------------YNSIISGLA 430
A+ FC + + D T+L Y S I+GL
Sbjct: 390 HEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLC 449
Query: 431 HHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQM 490
G A L M GL+ D + + L+ GL+ E ++ F+ M G++P
Sbjct: 450 KQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLN-SGISPDS 508
Query: 491 EHYGCVVDLLGRGGLLSEAYHLILNM 516
+ ++ + G ++ A L+L+M
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDM 534
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 121/581 (20%), Positives = 233/581 (40%), Gaps = 74/581 (12%)
Query: 29 ALQIQAHMVVTGLHHDLFLSTALISFFATNHR---ALRHSLRLFSLVTNPDLFLWNAII- 84
A I M+ +G ++ + T LI F N R A+R + PD+F +N++I
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 85 ---KAHSLSPNHAFXXXXXXXXXXXXXXXX-XFTFPYLLKSCANARTPHLGLQLHCHLVK 140
KA + +F F Y+ S + ++ C ++
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 141 SRFHSHVFVANALLHFYCV---FRDAHNAYK-VFEQMPVRDCVSYNMMINGFVRAGRAGC 196
++ + L++ YC +A +AY+ + +Q + D +Y +++NG + +
Sbjct: 556 NKV-----LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 197 SMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNAL 256
+ ++ +MRG GI PD ++ L++ S L + + + + E L N ++ N L
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE--GLTPNVIIYNML 668
Query: 257 VDMYAKCGCLELAERVVS--GVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV 314
+ + + G +E A+ ++ V+ + +++ Y GD+ A RLFD+M + +
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLK 374
V PD + C RL +E R I +
Sbjct: 729 V-------------------------------PDSFVYTTLVDGCCRLNDVE--RAITI- 754
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT---SKD---KKTTILYNSIISG 428
+ C + A+++ K G + +V + S D K + YN +I
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNP 488
L G + A LF +M+ L+P +T+ +LL G E F+ + G+ P
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-AIAAGIEP 873
Query: 489 QMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAV---------IWRALLSACKVHGDVE 539
Y +++ + G+ ++A L+ M F NAV RALLS G++E
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQM-FAKNAVDDGCKLSISTCRALLSGFAKVGEME 932
Query: 540 LAKLACQELLAVEH--DHGARYVMLSNMLADMDQHDEAASV 578
+A+ + ++ +++ D +++ +Q EA +V
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 176/462 (38%), Gaps = 55/462 (11%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMP 174
+ L++ + G +L + K + ++ C D AY + ++M
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 175 VRDC----VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQR 230
C V Y +I F++ R G +M+VL +M+ GI PD + +L+ S + +R
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS--KAKR 502
Query: 231 VGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVV--AAWTS 288
+ LV L NA A + Y + A++ V +R + T
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 289 LVSAYASRGDVEVA----RRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXX 344
L++ Y +G V A R + DQ D ++T +++G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 345 MKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVV--DM----YAK 398
+ PD ++ ++LG ++ I + E G T V+ +M + +
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE--------GLTPNVIIYNMLLGGFCR 674
Query: 399 CGSIDTALDVFCKTSKDK--KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVT 456
G I+ A ++ + S + Y +II G G A LF+EM+L GLVPD
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 457 FVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCV------------VDLLGRGG 504
+ L+ C V E T++G N + GC V G+
Sbjct: 735 YTTLVDGCCRLNDV-------ERAITIFGTNKK----GCASSTAPFNALINWVFKFGKTE 783
Query: 505 LLSEAYHLILNMPF----KANAVIWRALLSACKVHGDVELAK 542
L +E + +++ F K N V + ++ G++E AK
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 191/458 (41%), Gaps = 72/458 (15%)
Query: 143 FHSHVFVANALLHFYCVFRDAHNAYKVFEQMPV----RDCVSYNMMINGFVRAGRAGCSM 198
+ + V+ +AL+ Y A VF M + V+YN +I+ G+ G
Sbjct: 264 YGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA---CGKGGMEF 320
Query: 199 KVLG----DMRGFGIRPDEYTLVTLLSACS---------SLEDQRVGRQVHGLVYRELGC 245
K + +M+ G++PD T +LL+ CS +L D+ R++ V+
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS---- 376
Query: 246 LGDNALLVNALVDMYAKCGCLELAERVVSG--VRNGKSVVAAWTSLVSAYASRGDVEVAR 303
N L+D K G ++LA +++ V+ V ++++++ +A G + A
Sbjct: 377 -------YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 304 RLFDQMG----ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSEC 359
LF +M D VS+ ++S Y+ G +K D V A L
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 360 ARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF--CKTSKDKK 417
+ G + +++ + E H N ++D Y+K G A+++F K++ +
Sbjct: 490 GKQGKYDEVKKVFTEMKRE--HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 418 TTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDE----- 472
+LY+++I L +GL A++L +EM G+ P+ VT+ +++ A G S +D
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYS 607
Query: 473 --GKKPFESMSTVYGVNPQMEHYGC-VVDLLGRGGLLS-------------------EAY 510
G PF S + ++ E G V+ L G+ S E +
Sbjct: 608 NGGSLPFSSSA----LSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVF 663
Query: 511 HLILNMPFKANAVIWRALLSACKVHGDVELAKLACQEL 548
+ + K N V + A+L+AC E A + +EL
Sbjct: 664 RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 51/330 (15%)
Query: 252 LVNALVDMYAKCGCLELAERVVSGVRNGK--SVVAAWTSLVSAYASRGDVEVARRLFDQM 309
L +A++ + G + +A+R+ G + V A+++L+SAY G E A +F+ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 310 GE----RDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXX-MKPDEVDVVAALSECARLGA 364
E ++V++ A+I G ++PD + + L+ C+R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 365 LELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDK--KTTILY 422
E R + + N Q+ ++D K G +D A ++ + + + Y
Sbjct: 355 WEAARNLFDEMT--NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 423 NSIISGLAHHGLGKYAITLFEEMRLLGLV------------------------------- 451
+++I G A G A+ LF EMR LG+
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 452 ----PDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLS 507
D VT+ ALL G G DE KK F M + V P + Y ++D +GGL
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSKGGLYK 531
Query: 508 EAYHLILNMP---FKANAVIWRALLSA-CK 533
EA + +A+ V++ AL+ A CK
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCK 561
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 384 QNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDK--KTTILYNSIISGLAHHGLGKYAITL 441
+ G A++ + G + A +F T ++++IS GL + AI++
Sbjct: 231 EQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISV 290
Query: 442 FEEMRLLGLVPDGVTFVALLCACGHSGL-VDEGKKPFESMSTVYGVNPQMEHYGCVVDLL 500
F M+ GL P+ VT+ A++ ACG G+ + K F+ M GV P + ++ +
Sbjct: 291 FNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVC 349
Query: 501 GRGGLLSEAYHL---ILNMPFKANAVIWRALLSACKVHGDVELA 541
RGGL A +L + N + + + LL A G ++LA
Sbjct: 350 SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 169/407 (41%), Gaps = 57/407 (14%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
N ++HF C A+ + M ++ D +SY+ ++NG+ R G K++ M+
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCL 266
G++P+ Y +++ GL+ R C
Sbjct: 310 KGLKPNSYIYGSII----------------GLLCR--------------------ICKLA 333
Query: 267 ELAERVVSGVRNG---KSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD----VVSWTA 319
E E +R G +VV +T+L+ + RGD+ A + F +M RD V+++TA
Sbjct: 334 EAEEAFSEMIRQGILPDTVV--YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
+ISG+ G ++PD V ++ + G ++ R+H
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILYNSIISGLAHHGLGKY 437
C N ++D K G +D+A ++ + K + YNSI++GL G +
Sbjct: 452 --CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 438 AITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
A+ L E GL D VT+ L+ A SG +D+ ++ + M G+ P + + ++
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLM 568
Query: 498 DLLGRGGLLSEAYHLILNMPFKA---NAVIWRALLSACKVHGDVELA 541
+ G+L + L+ M K NA + +L+ + +++ A
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 139/351 (39%), Gaps = 30/351 (8%)
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRD----CVSYNMMINGFVRAGRAGCSMKVLGDM 204
V L+ +C D A K F +M RD ++Y +I+GF + G + K+ +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 205 RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCG 264
G+ PD T L++ + +VH + + GC N + L+D K G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI-QAGC-SPNVVTYTTLIDGLCKEG 470
Query: 265 CLELAERVVSGV-RNG-KSVVAAWTSLVSAYASRGDVEVARRL---FDQMG-ERDVVSWT 318
L+ A ++ + + G + + + S+V+ G++E A +L F+ G D V++T
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 319 AMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
++ Y +G ++P V ++ G LE G ++
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL------ 584
Query: 379 NWHCGQ----NGGFTCAVVDMYAKCGSIDTALDVF---CK--TSKDKKTTILYNSIISGL 429
NW + N ++V Y ++ A ++ C D KT Y +++ G
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT---YENLVKGH 641
Query: 430 AHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM 480
K A LF+EM+ G T+ L+ E ++ F+ M
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 169/407 (41%), Gaps = 57/407 (14%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
N ++HF C A+ + M ++ D +SY+ ++NG+ R G K++ M+
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCL 266
G++P+ Y +++ GL+ R C
Sbjct: 310 KGLKPNSYIYGSII----------------GLLCR--------------------ICKLA 333
Query: 267 ELAERVVSGVRNG---KSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD----VVSWTA 319
E E +R G +VV +T+L+ + RGD+ A + F +M RD V+++TA
Sbjct: 334 EAEEAFSEMIRQGILPDTVV--YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
+ISG+ G ++PD V ++ + G ++ R+H
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILYNSIISGLAHHGLGKY 437
C N ++D K G +D+A ++ + K + YNSI++GL G +
Sbjct: 452 --CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 438 AITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
A+ L E GL D VT+ L+ A SG +D+ ++ + M G+ P + + ++
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLM 568
Query: 498 DLLGRGGLLSEAYHLILNMPFKA---NAVIWRALLSACKVHGDVELA 541
+ G+L + L+ M K NA + +L+ + +++ A
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 139/351 (39%), Gaps = 30/351 (8%)
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMPVRD----CVSYNMMINGFVRAGRAGCSMKVLGDM 204
V L+ +C D A K F +M RD ++Y +I+GF + G + K+ +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 205 RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCG 264
G+ PD T L++ + +VH + + GC N + L+D K G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI-QAGC-SPNVVTYTTLIDGLCKEG 470
Query: 265 CLELAERVVSGV-RNG-KSVVAAWTSLVSAYASRGDVEVARRL---FDQMG-ERDVVSWT 318
L+ A ++ + + G + + + S+V+ G++E A +L F+ G D V++T
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 319 AMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE 378
++ Y +G ++P V ++ G LE G ++
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL------ 584
Query: 379 NWHCGQ----NGGFTCAVVDMYAKCGSIDTALDVF---CK--TSKDKKTTILYNSIISGL 429
NW + N ++V Y ++ A ++ C D KT Y +++ G
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT---YENLVKGH 641
Query: 430 AHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM 480
K A LF+EM+ G T+ L+ E ++ F+ M
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 168/387 (43%), Gaps = 30/387 (7%)
Query: 134 LHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD----CVSYNMMINGFV 189
+ ++ + F +V+V N L++ +C + +A KVF+++ R VS+N +ING+
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 190 RAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLG-- 247
+ G ++ M RPD +T L++A E++ G HGL + E+ G
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK-ENKMDG--AHGL-FDEMCKRGLI 342
Query: 248 DNALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRL 305
N ++ L+ +++ G ++L + + + + + + +LV+ + GD+ AR +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 306 FDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECAR 361
D M R D +++T +I G+ G ++ D V A +
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC---- 458
Query: 362 LGALELGRRIHLKYA-AENWHCG--QNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDK-- 416
G + GR I + A E G + ++D + K G T + + D
Sbjct: 459 -GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 417 KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKP 476
+ + YN +++GL G K A L + M +G+VPD +T+ LL GH + K+
Sbjct: 518 PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL--EGHHRHANSSKRY 575
Query: 477 FESMSTVYGVNPQMEHYGCVVDLLGRG 503
+ G+ + Y +V+ L R
Sbjct: 576 IQKPEI--GIVADLASYKSIVNELDRA 600
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 176/427 (41%), Gaps = 55/427 (12%)
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC----VSYNMMING------ 187
+V++ F +L+ YC +D +A+KVF +MP++ C V+Y +I+G
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 188 -------FVRAGRAGC----------------------SMKVLGDMRGFGIRPDEYTLVT 218
FV+ C ++ ++ +M GI+P+ +T
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 219 LL-SACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR 277
L+ S CS + ++ R++ G + E G L N + NAL++ Y K G +E A VV +
Sbjct: 364 LIDSLCSQCKFEK-ARELLGQML-EKG-LMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 278 NGK--SVVAAWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXX 331
+ K + L+ Y + +V A + ++M ER DVV++ ++I G +G
Sbjct: 421 SRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 332 XXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCA 391
+ PD+ + + + +E L + E N A
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE--EACDLFDSLEQKGVNPNVVMYTA 537
Query: 392 VVDMYAKCGSIDTALDVFCKT-SKD-KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG 449
++D Y K G +D A + K SK+ ++ +N++I GL G K A L E+M +G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 450 LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA 509
L P T L+ G D F+ M + G P Y + R G L +A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 510 YHLILNM 516
++ M
Sbjct: 657 EDMMAKM 663
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 203/526 (38%), Gaps = 90/526 (17%)
Query: 12 YDRVKALLASSCRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSL 71
+DRV+++L S MV + +H ++ LI FF N L+ LRL
Sbjct: 152 FDRVRSILDS--------------MVKSNVHGNISTVNILIGFFG-NTEDLQMCLRL--- 193
Query: 72 VTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLG 131
+K L N FT+ LL++ +R
Sbjct: 194 ------------VKKWDLKMN-------------------SFTYKCLLQAYLRSRDYSKA 222
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC----VSYNMMING 187
++C + + +F N LL A +VFE M R C +Y +MI
Sbjct: 223 FDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRT 279
Query: 188 FVRAGRAGCSMKVLGDM--RGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGC 245
R G+ ++ + +M G + Y + + A + D+ + QV + E GC
Sbjct: 280 MGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI--QVFSRMV-ETGC 336
Query: 246 LGDN---ALLVNALV---DMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDV 299
+ +LL+N LV + G +E+++R ++ ++ LV + G V
Sbjct: 337 RPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ--------GIYSYLVRTLSKLGHV 388
Query: 300 EVARRLFDQM------GERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVV 353
A RLF M GERD S+ +M+ AG + D +
Sbjct: 389 SEAHRLFCDMWSFPVKGERD--SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 354 AALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAV-VDMYAKCGSIDTALDVFCKT 412
S LG L+ IH + FT + + + + G +D A+++F +
Sbjct: 447 TVFSA---LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL 503
Query: 413 SKD--KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLV 470
+ K I YNS+I+ L +G A F+EM+ GL PD VT+ L+ G + V
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 471 DEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM 516
+ FE M V G P + Y ++D L + G +EA L M
Sbjct: 564 EMAYSLFEEM-LVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 17/266 (6%)
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGE----RDVVSWTAMISGYSHAGYX-XXXXXXX 337
V A+T+++ AY+ G E A LF++M E +V++ ++ + G
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 269
Query: 338 XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC--AVVDM 395
+K DE LS CAR G L + ++ AE CG G A++ +
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAK----EFFAELKSCGYEPGTVTYNALLQV 325
Query: 396 YAKCGSIDTALDVFCKTSKDK--KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPD 453
+ K G AL V + ++ ++ YN +++ G K A + E M G++P+
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 454 GVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLI 513
+T+ ++ A G +G DE K F SM G P Y V+ LLG+ +E ++
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 514 LNMPFKA---NAVIWRALLSACKVHG 536
+M N W +L+ C G
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKG 470
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 157/385 (40%), Gaps = 57/385 (14%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQM----PVRDCVSYNMMINGFVRAGRAGCS-MKVLGDMR 205
+LH Y A +FE+M P V+YN++++ F + GR+ + VL +MR
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLG--DNALLVNALVDMYAKC 263
G++ DE+T T+LSAC+ R ++ + EL G + NAL+ ++ K
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEF----FAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 264 GCLELAERVVSGVRNGKSVV--AAWTSLVSAYASRGDVEVARRLFDQMGERDV----VSW 317
G A V+ + + LV+AY G + A + + M ++ V +++
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY 389
Query: 318 TAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAA 377
T +I Y AG K DE + L Y+
Sbjct: 390 TTVIDAYGKAG-----------------KEDEA--------------------LKLFYSM 412
Query: 378 ENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC--KTSKDKKTTILYNSIISGLAHHGLG 435
+ C N AV+ + K + + + C K++ +N++++ + G+
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMD 472
Query: 436 KYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGC 495
K+ +F EM+ G PD TF L+ A G G + K + M T G N + Y
Sbjct: 473 KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM-TRAGFNACVTTYNA 531
Query: 496 VVDLLGRGGLLSEAYHLILNMPFKA 520
+++ L R G ++I +M K
Sbjct: 532 LLNALARKGDWRSGENVISDMKSKG 556
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 194/473 (41%), Gaps = 24/473 (5%)
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMING 187
++L H+ + V N L+H C Y + M R + V+YN +ING
Sbjct: 288 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347
Query: 188 FVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLG 247
F G+ + ++L +M FG+ P+ T L+ + + + E L
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG--HISEGNFKEALKMFYMMEAKGLT 405
Query: 248 DNALLVNALVDMYAKCGCLELAERVVSGV-RNGKSV-VAAWTSLVSAYASRGDVEVARRL 305
+ + L+D K +LA + RNG V +T ++ G ++ A L
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465
Query: 306 FDQMG----ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECAR 361
++M + D+V+++A+I+G+ G + P+ + + C R
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525
Query: 362 LGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF-CKTSKDK-KTT 419
+G L+ RI+ E H + F V + K G + A + C TS T
Sbjct: 526 MGCLKEAIRIYEAMILEG-HTRDHFTFNVLVTSL-CKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 420 ILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFES 479
+ ++ +I+G + G G A ++F+EM +G P T+ +LL G + E +K +S
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 480 MSTV-YGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKA---NAVIWRALLSACKVH 535
+ V V+ M Y ++ + + G L++A L M ++ ++ + +L+S
Sbjct: 644 LHAVPAAVDTVM--YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 536 GDVELAKLACQELLAVEH--DHGARYVMLSNMLADMDQHDEAASVRKAIDNVG 586
G +A L +E A + + Y + + Q R+ +DN+G
Sbjct: 702 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 199/495 (40%), Gaps = 31/495 (6%)
Query: 62 LRHSLRLFSLVT----NPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPY 117
++ SL +F L+ NP ++ NAI+ + S TF
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR- 176
L+ + L + KS + + N +LH+YC A ++ + M +
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 177 ---DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGR 233
D +YNM+I+ R+ R +L DMR I P+E T TL++ S+ +
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 234 QVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTS---LV 290
Q+ + G L N + NAL+D + G + A ++ + K + + S L+
Sbjct: 359 QLLNEML-SFG-LSPNHVTFNALIDGHISEGNFKEALKMFY-MMEAKGLTPSEVSYGVLL 415
Query: 291 SAYASRGDVEVARRLFDQMGERDV----VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK 346
+ ++AR + +M V +++T MI G G+ +
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475
Query: 347 PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCG--QNGGFTCAVVDMYAKCGSIDT 404
PD V A ++ ++G + + I + + G NG ++ + G +
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRI----YRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 405 ALDVFCKTSKDKKTT--ILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLC 462
A+ ++ + T +N +++ L G A M G++P+ V+F L+
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Query: 463 ACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM---PFK 519
G+SG + F+ M+ V G +P YG ++ L +GG L EA + ++ P
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 650
Query: 520 ANAVIWRALLSA-CK 533
+ V++ LL+A CK
Sbjct: 651 VDTVMYNTLLTAMCK 665
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/366 (18%), Positives = 153/366 (41%), Gaps = 29/366 (7%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPV----RDCVSYNMMINGF 188
++ C + + + + + L++ C A +++E M + RD ++N+++
Sbjct: 499 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Query: 189 VRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL----VYRELG 244
+AG+ + + + M GI P+ + L++ G GL V+ E+
Sbjct: 559 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING--------YGNSGEGLKAFSVFDEMT 610
Query: 245 CLGDNALLVN--ALVDMYAKCGCLELAERVVSGVRNGKSVV--AAWTSLVSAYASRGDVE 300
+G + +L+ K G L AE+ + + + V + +L++A G++
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 301 VARRLFDQMGERDVV----SWTAMISGYSHAGYXXXXXXXXXXXXXX-XMKPDEVDVVAA 355
A LF +M +R ++ ++T++ISG G + P++V
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730
Query: 356 LSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD 415
+ + G + G I+ + +N + T A++D Y++ G I+ D+ +
Sbjct: 731 VDGMFKAGQWKAG--IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 416 KKTTIL--YNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEG 473
L YN ++ G + + L+ + L G++PD +T +L+ S +++ G
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 474 KKPFES 479
K ++
Sbjct: 849 LKILKA 854
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 159/374 (42%), Gaps = 28/374 (7%)
Query: 151 NALLHFYCVFRDAHNAYKVFEQMP----VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
+ +L++ C A+ +FE+M V D +Y +M++ F +AG + K +MR
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCL 266
G P+ T L+ A + ++ + E GCL N + +AL+D + K G +
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE-GCLP-NIVTYSALIDGHCKAGQV 604
Query: 267 ELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER-DVVSWTAMISGYS 325
E A ++ + K V DV++ + +D ER +VV++ A++ G+
Sbjct: 605 EKACQIFERMCGSKDV--------------PDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 326 HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQN 385
+ +P+++ A + ++G L+ + + + + H
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE---HGFPA 707
Query: 386 GGFT-CAVVDMYAKCGSIDTALDVFCKTSKDK--KTTILYNSIISGLAHHGLGKYAITLF 442
+T +++D Y K D A V K ++ ++Y +I GL G A L
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 443 EEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGR 502
+ M G P+ VT+ A++ G G ++ + E M + GV P Y ++D +
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS-KGVAPNYVTYRVLIDHCCK 826
Query: 503 GGLLSEAYHLILNM 516
G L A++L+ M
Sbjct: 827 NGALDVAHNLLEEM 840
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 151/365 (41%), Gaps = 22/365 (6%)
Query: 162 DAHNAYKVFEQMPVR-DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLL 220
D +K ++ R + V+Y +++GF ++ R + K+L M G P++ L+
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 221 SACSSLEDQRVGRQVHGLVYRELGCLGDNALLV--NALVDMYAKCGCLELAERVVSGVRN 278
+ ++V E+ G A L ++L+D Y K +LA +V+S +
Sbjct: 682 DGLCKVGKLDEAQEVKT----EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 279 GKSV--VAAWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXX 332
V +T ++ G + A +L M E+ +VV++TAMI G+ G
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 797
Query: 333 XXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAV 392
+ P+ V + C + GAL++ + + +W G+ V
Sbjct: 798 CLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP-THTAGYR-KV 855
Query: 393 VDMYAKCGSIDTALDVFCKTSKDKKTTIL--YNSIISGLAHHGLGKYAITLFEEMRLLG- 449
++ + K +L + + +D L Y +I L + A+ L EE+
Sbjct: 856 IEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 450 -LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSE 508
LV T+ +L+ + + V+ + F M T GV P+M+ + ++ L R +SE
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEM-TKKGVIPEMQSFCSLIKGLFRNSKISE 972
Query: 509 AYHLI 513
A L+
Sbjct: 973 ALLLL 977
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 180/490 (36%), Gaps = 84/490 (17%)
Query: 149 VANALLHFYCVFRDAHNAYKVFEQMP----VRDCVSYNMMI------------------- 185
+ N+L+H YC D AYK+ ++M + V YN++I
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 186 ------------------NGFVR----AGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSAC 223
+ F R AG+ + V+ +M G G PD T +L+
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 224 SSLEDQRVGRQVHGLVYREL--GCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKS 281
+ ++ L++ E+ G L + +VD + K G +E A + + +R
Sbjct: 494 CNASKM----ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 282 V--VAAWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXX 335
V +T+L+ AY V A LF+ M ++V+++A+I G+ AG
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 336 XXXXXXXXXMKPD------EVDVVAALSECARLGAL----------ELGRRIHLKYAAEN 379
PD + D + GAL E R++ + E
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 380 WHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILYNSIISGLAHHGLGKY 437
C N A++D K G +D A +V + S+ T Y+S+I
Sbjct: 670 --CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 438 AITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVV 497
A + +M P+ V + ++ G DE K + M G P + Y ++
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE-KGCQPNVVTYTAMI 786
Query: 498 DLLGRGGLLSEAYHLILNMPFKA---NAVIWRALLSACKVHGDVELAKLACQELLAV--- 551
D G G + L+ M K N V +R L+ C +G +++A +E+
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846
Query: 552 EHDHGARYVM 561
H G R V+
Sbjct: 847 THTAGYRKVI 856
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 160/426 (37%), Gaps = 58/426 (13%)
Query: 132 LQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKV---FEQMPVRDCVSYNMMINGF 188
L L +V+ ++ V + L+ + R+ A +V E+ D +YN +INGF
Sbjct: 109 LHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGF 168
Query: 189 VRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLL-SACSSLEDQRVGRQVHGLVYRELGCLG 247
+ R + +VL MR PD T ++ S CS
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR---------------------- 206
Query: 248 DNALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRL 305
G L+LA +V++ + N + V +T L+ A G V+ A +L
Sbjct: 207 ----------------GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 306 FDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECAR 361
D+M R D+ ++ +I G G +PD + L
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 362 LGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTT-- 419
G E G ++ K +E C N ++ + G I+ A+++ K K+K T
Sbjct: 311 QGKWEEGEKLMTKMFSE--KCDPNVVTYSILITTLCRDGKIEEAMNLL-KLMKEKGLTPD 367
Query: 420 -ILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFE 478
Y+ +I+ G AI E M G +PD V + +L +G D+ + F
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 479 SMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM---PFKANAVIWRALLSACKVH 535
+ V G +P Y + L G A H+IL M + + + +++S
Sbjct: 428 KLGEV-GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486
Query: 536 GDVELA 541
G V+ A
Sbjct: 487 GMVDEA 492
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 183/509 (35%), Gaps = 60/509 (11%)
Query: 22 SCRTIQ--QALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVT---NPD 76
SCR+ ++L + MV G + D+ L T LI F T R + ++R+ ++ PD
Sbjct: 99 SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFT-LRNIPKAVRVMEILEKFGQPD 157
Query: 77 LFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHC 136
+F +NA+I C R L
Sbjct: 158 VFAYNALINGF----------------------------------CKMNRIDDATRVLD- 182
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC----VSYNMMINGFVRAG 192
+ F N ++ C A KV Q+ +C ++Y ++I + G
Sbjct: 183 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 193 RAGCSMKVLGDMRGFGIRPDEYTLVTLLSA-CSSLEDQRVGRQVHGLVYRELGCLGDNAL 251
++K++ +M G++PD +T T++ C R V L + GC D +
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK--GCEPD-VI 299
Query: 252 LVNALVDMYAKCGCLELAERVVSGVRNGK--SVVAAWTSLVSAYASRGDVEVARRLFDQM 309
N L+ G E E++++ + + K V ++ L++ G +E A L M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 310 GER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGAL 365
E+ D S+ +I+ + G PD V+ L+ + G
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 366 ELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILYN 423
+ I K C N + G AL + + + I YN
Sbjct: 420 DQALEIFGKLGE--VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 424 SIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTV 483
S+IS L G+ A L +MR P VT+ +L + +++ ESM
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM-VG 536
Query: 484 YGVNPQMEHYGCVVDLLGRGGLLSEAYHL 512
G P Y +++ +G G +EA L
Sbjct: 537 NGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 141/349 (40%), Gaps = 24/349 (6%)
Query: 276 VRNGKSV-VAAWTSLVSAYASRGDVEVARR---LFDQMGERDVVSWTAMISGYSHAGYXX 331
VR G + V T L+ + + ++ A R + ++ G+ DV ++ A+I+G+
Sbjct: 116 VRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRID 175
Query: 332 XXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCA 391
PD V + G L+L ++ + ++N C
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN--CQPTVITYTI 233
Query: 392 VVDMYAKCGSIDTALDVFCK--TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG 449
+++ G +D AL + + + K YN+II G+ G+ A + + L G
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 450 LVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA 509
PD +++ LL A + G +EG+K M + +P + Y ++ L R G + EA
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 510 YHLILNMPFKA---NAVIWRALLSACKVHGDVELAKLACQELLAVEHDHG-----ARYVM 561
+L+ M K +A + L++A G +++A E L G Y
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI----EFLETMISDGCLPDIVNYNT 408
Query: 562 LSNMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDK 610
+ L + D+A + + VG P SY M AL + +GDK
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCS-PNSSSYNTMFSAL--WSSGDK 454
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 145/377 (38%), Gaps = 53/377 (14%)
Query: 149 VANALLHFYCVFRDAHNAYKVFEQ----MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM 204
V N+LL+ +A K+F++ D ++N++I G G+A ++++LG M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 205 RGFGIRPDEYTLVTLLSA-CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKC 263
GFG PD T TL+ C S E +
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKAS------------------------------- 261
Query: 264 GCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV----VSWTA 319
E+ + V SG VV +TS++S Y G + A L D M + V++
Sbjct: 262 ---EMFKDVKSGSVCSPDVVT-YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
++ GY+ AG PD V + + R+G + G R+ + A
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 380 WHCGQNGGFTCAVVDMYAKCGS--IDTALDVFCK-TSKDK-KTTILYNSIISGLAHHGLG 435
FT +++ + A C + A ++ + SKD +YN +I G G
Sbjct: 378 MF---PNAFTYSIL-INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 436 KYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGC 495
A + EEM PD +TF L+ G + E F M + G +P
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI-GCSPDKITVSS 492
Query: 496 VVDLLGRGGLLSEAYHL 512
++ L + G+ EAYHL
Sbjct: 493 LLSCLLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 145/377 (38%), Gaps = 53/377 (14%)
Query: 149 VANALLHFYCVFRDAHNAYKVFEQ----MPVRDCVSYNMMINGFVRAGRAGCSMKVLGDM 204
V N+LL+ +A K+F++ D ++N++I G G+A ++++LG M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 205 RGFGIRPDEYTLVTLLSA-CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKC 263
GFG PD T TL+ C S E +
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKAS------------------------------- 261
Query: 264 GCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV----VSWTA 319
E+ + V SG VV +TS++S Y G + A L D M + V++
Sbjct: 262 ---EMFKDVKSGSVCSPDVVT-YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
++ GY+ AG PD V + + R+G + G R+ + A
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 380 WHCGQNGGFTCAVVDMYAKCGS--IDTALDVFCK-TSKDK-KTTILYNSIISGLAHHGLG 435
FT +++ + A C + A ++ + SKD +YN +I G G
Sbjct: 378 MF---PNAFTYSIL-INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 436 KYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGC 495
A + EEM PD +TF L+ G + E F M + G +P
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI-GCSPDKITVSS 492
Query: 496 VVDLLGRGGLLSEAYHL 512
++ L + G+ EAYHL
Sbjct: 493 LLSCLLKAGMAKEAYHL 509
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/500 (21%), Positives = 183/500 (36%), Gaps = 24/500 (4%)
Query: 23 CRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHR---ALRHSLRLFSLVTNPDLFL 79
CR + A ++ G + + LI+ R AL R+ + PDL
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTF-PYLLKSCANARTPHLGLQLHCHL 138
N ++ LS A T+ P L C + +T L ++L +
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA-LAMELLRKM 254
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRA 194
+ + ++ C NA+ +F +M ++ + ++YN++I GF AGR
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 195 GCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG-LVYRELGCLGDNALLV 253
K+L DM I P+ T L+ + R ++H +++R + + +
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG---IAPDTITY 371
Query: 254 NALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE 311
+L+D + K L+ A ++V + + + + L++ Y ++ LF +M
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 312 R----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALEL 367
R D V++ +I G+ G + P+ V L G E
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 368 GRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILYNSI 425
I K E + G ++ +D A D+FC K YN +
Sbjct: 492 ALEIFEKI--EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 426 ISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYG 485
I GL G A LF +M G PDG T+ L+ A G + K E + G
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC-G 608
Query: 486 VNPQMEHYGCVVDLLGRGGL 505
+ V+D+L G L
Sbjct: 609 FSVDASTIKMVIDMLSDGRL 628
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 184/485 (37%), Gaps = 71/485 (14%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
F + L+ + + QL ++ R + N L+ YC + ++KV E+
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 173 MPVR----DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLED 228
M +++N ++ G +AG + VL +M+ G PD +T L SS E
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 229 QRVGRQVH------GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV 282
V+ G+ C ++L+NAL K G +E AE ++ G K +
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTC----SILLNAL----CKEGKIEKAEEIL-GREMAKGL 385
Query: 283 V---AAWTSLVSAYASRGDVEVAR----------------------RLFDQMGERD---- 313
V + +++ Y +GD+ AR R F ++GE +
Sbjct: 386 VPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK 445
Query: 314 -------------VVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECA 360
V ++ +I GY P+ V L C
Sbjct: 446 EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY-GTLINCL 504
Query: 361 RLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTT- 419
G+ L +I +K E+ ++D G I+ A F K K
Sbjct: 505 CKGSKLLEAQI-VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR-FSKEMLKKGIEL 562
Query: 420 --ILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPF 477
+ YN++I GL+ G A L E+ GL PD T+ +L+ G +G V +
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 478 ESMSTVYGVNPQMEHYGCVVDLLGRGGL-LSEAYHLILNMPFKANAVIWRALLSACKVHG 536
E M G+ P ++ Y ++ L + G+ L+E L M K + +++ +L VHG
Sbjct: 623 EEMKRS-GIKPTLKTYHLLISLCTKEGIELTE--RLFGEMSLKPDLLVYNGVLHCYAVHG 679
Query: 537 DVELA 541
D+E A
Sbjct: 680 DMEKA 684
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 174/433 (40%), Gaps = 38/433 (8%)
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMIN 186
GL+L + R + VF+ N L+ C + ++A ++F++M R ++YN +I+
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 187 GFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA---CSSLED-QRVGRQVHGLVYRE 242
G+ +AG S KV M+ I P T TLL +ED + V +++ ++
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM-----KD 312
Query: 243 LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTS--LVSAYASRGDVE 300
LG + D A + L D Y+ E A V + + A+T L++A G +E
Sbjct: 313 LGFVPD-AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 301 VARRLFDQMGERDVVS----WTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAAL 356
A + + + +V + MI GY G MKPD + +
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Query: 357 SECARLGALELGR----RIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKT 412
LG +E ++ LK + + ++ Y + D D+ K
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYN------ILIGGYGRKYEFDKCFDIL-KE 484
Query: 413 SKDKKT---TILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+D T + Y ++I+ L A + +M G+ P + L+ C G
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP---FKANAVIWR 526
+++ + F G+ + Y ++D L G LSEA L+L + K + +
Sbjct: 545 IEDAFR-FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 527 ALLSACKVHGDVE 539
+L+S G+V+
Sbjct: 604 SLISGYGFAGNVQ 616
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 146/354 (41%), Gaps = 51/354 (14%)
Query: 168 KVFEQMPV----RDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSAC 223
+VF++MP R SY +IN + R GR S+++L M+ I P T T+++AC
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 224 SSLEDQRVGRQVHGL--VYRELGCLGDNALLV--NALVDMYAKCGCLELAERVVSGVRNG 279
+ R G GL ++ E+ G +V N L+ A G + AE V + +G
Sbjct: 222 A-----RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG 276
Query: 280 KSV--VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXX 337
V + ++ LV + G + ++ D +GE M SG S
Sbjct: 277 GIVPDLTTYSHLVETF---GKLRRLEKVCDLLGE--------MASGGSL----------- 314
Query: 338 XXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYA 397
PD L A+ G+++ + + A C N +++++
Sbjct: 315 ---------PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG--CTPNANTYSVLLNLFG 363
Query: 398 KCGSIDTALDVFC--KTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGV 455
+ G D +F K+S YN +I G K +TLF +M + PD
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 456 TFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA 509
T+ ++ ACG GL ++ +K + M T + P + Y V++ G+ L EA
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGVIEAFGQAALYEEA 476
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 192/455 (42%), Gaps = 28/455 (6%)
Query: 113 FTFPYLLKS-CANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFE 171
+T+ L+ C ++ P L L + ++K + ++ ++LL+ YC + A + +
Sbjct: 117 YTYSILINCFCRRSQLP-LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 175
Query: 172 QMPVR----DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLE 227
QM V + V++N +I+G +A +M ++ M G +PD T +++
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 228 DQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELA-----ERVVSGVRNGKSV 282
D + + L E G L L+ N ++D K ++ A E G+R
Sbjct: 236 DTDLAFNL--LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN--- 290
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXX 338
V ++SL+S + G A RL M ER DV +++A+I + G
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 339 XXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAK 398
+ P V + ++ L+ +++ ++ HC + ++ + K
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK--HCFPDVVTYNTLIKGFCK 408
Query: 399 CGSIDTALDVFCKTSKDK--KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVT 456
++ ++VF + S+ T+ YN +I GL G A +F+EM G+ P+ +T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 457 FVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM 516
+ LL +G +++ FE + + P + Y +++ + + G + + + L N+
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 517 PFKA---NAVIWRALLSACKVHGDVELAKLACQEL 548
K + V + ++S G E A +E+
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/444 (19%), Positives = 182/444 (40%), Gaps = 25/444 (5%)
Query: 143 FHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC----VSYNMMINGFVRAGRAGCSM 198
+ + N L+H + A A + ++M + C V+Y +++NG + G +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLG--DNALLVNAL 256
+L M + P T++ + + ++E+ G N + ++L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL----FKEMETKGIRPNVVTYSSL 297
Query: 257 VDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDV 314
+ G A R++S + R V +++L+ A+ G + A +L+D+M +R +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 315 ----VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR 370
V+++++I+G+ PD V + + +E G
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 371 IHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILYNSIISG 428
+ + ++ G + + ++ + G D A ++F + D + YN+++ G
Sbjct: 418 V-FREMSQRGLVGNTVTYNILIQGLF-QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNP 488
L +G + A+ +FE ++ + P T+ ++ +G V++G F ++S + GV P
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS-LKGVKP 534
Query: 489 QMEHYGCVVDLLGRGGLLSEAYHLILNMPFKA---NAVIWRALLSACKVHGDVELAKLAC 545
+ Y ++ R G EA L M N+ + L+ A GD E +
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Query: 546 QELLAVEHDHGARYV-MLSNMLAD 568
+E+ + A + +++NML D
Sbjct: 595 KEMRSCGFAGDASTIGLVTNMLHD 618
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 118/296 (39%), Gaps = 13/296 (4%)
Query: 26 IQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLV---TNPDLFLWNA 82
+ AL + M G+ ++ ++LIS R S L ++ NPD+F ++A
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 83 IIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKS-CANARTPHLGLQLHCHLVKS 141
+I A T+ L+ C + R Q+ +V
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE-AKQMFEFMVSK 390
Query: 142 RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRAGCS 197
V N L+ +C ++ +VF +M R + V+YN++I G +AG +
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALV 257
++ +M G+ P+ T TLL ++ ++ + + Y + + N ++
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLC--KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 258 DMYAKCGCLELAERVVSG--VRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE 311
+ K G +E + ++ K V A+ +++S + +G E A LF +M E
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 189/425 (44%), Gaps = 38/425 (8%)
Query: 139 VKSRFHSHVFVANALLHFYCVFRD-AHNAYKVFEQMPVR-DCVSYNMMINGFVRAGRAGC 196
++ +++ F+ N L+ +F D A ++V E ++ D V+YN MI G+ +AG+
Sbjct: 218 IEPTLYTYNFLMNGLVS--AMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQK 275
Query: 197 SMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDN------A 250
+M+ L DM G D+ T +T++ AC + D G V +Y+E+ G +
Sbjct: 276 AMEKLRDMETRGHEADKITYMTMIQACYA--DSDFGSCVA--LYQEMDEKGIQVPPHAFS 331
Query: 251 LLVNALVDMYAKCGCLELAERVVSG-VRNG-KSVVAAWTSLVSAYASRGDVEVARRLFDQ 308
L++ L K G L V +R G K VA +T L+ YA G VE A RL +
Sbjct: 332 LVIGGL----CKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 309 MGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGA 364
M + DVV+++ +++G G + + + + + + G
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 365 LELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDK---KTTIL 421
++ R+ + + + C ++ A++D + K +D A+ +F + +++ +T
Sbjct: 448 VDEAERLFEEMSEKG--CTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYT 505
Query: 422 YNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMS 481
Y ++SG+ + A+ L++ M G+ P F AL SG V K + ++
Sbjct: 506 YTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA 565
Query: 482 TVYGVNPQMEHYGC--VVDLLGRGGLLSEAYHLILNMPFKANAVIWR---ALLSACKVHG 536
+ GV + C +++ L + G + EA L + + V R +++A + G
Sbjct: 566 PM-GV---ILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVG 621
Query: 537 DVELA 541
+LA
Sbjct: 622 KADLA 626
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 173/414 (41%), Gaps = 22/414 (5%)
Query: 143 FHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD----CVSYNMMINGFVRAGRAGCSM 198
+ + V +L+ +C + +F+++ R ++YN +I GF + G+ +
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
++ M G+RP+ YT L+ + + Q+ L+ + NA+ N +++
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE--EPNAVTYNIIIN 360
Query: 259 MYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM------G 310
K G + A +V + R + + L+ ++GD++ A +L M
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 311 ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRR 370
+ DV+S+ A+I G D V L+ + G ++ +
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG--DVNKA 478
Query: 371 IHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK--TSKDKKTTILYNSIISG 428
+ L + +N A++D + K G ++ A + CK S+ + + YN ++S
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNP 488
L G A LFEEM+ PD V+F ++ +G + + MS G++P
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA-GLSP 597
Query: 489 QMEHYGCVVDLLGRGGLLSEA---YHLILNMPFKANAVIWRALLSACKVHGDVE 539
+ Y +++ + G L EA + +++ F+ +A I ++L C G+ +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/442 (19%), Positives = 172/442 (38%), Gaps = 59/442 (13%)
Query: 118 LLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR- 176
L+ +R L + ++++ + + LL Y R A+ V M R
Sbjct: 78 LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 177 ---DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA-CSSLEDQRVG 232
+ ++N+++ G R G ++ +L +MR + PD ++ T++ C E ++
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 233 RQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR--NGKSVVAAWTSLV 290
+ + + GC + + L+D + K G ++ A + ++ ++ + +TSL+
Sbjct: 198 ELANEM--KGSGC-SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 291 SAYASRGDVEVARRLFDQMGERD----VVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK 346
+ G+++ + LFD++ ER +++ +I G+ G
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG------------------ 296
Query: 347 PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
L E + + + R + N ++D G AL
Sbjct: 297 --------QLKEASEIFEFMIERGVR-----------PNVYTYTGLIDGLCGVGKTKEAL 337
Query: 407 DVF-CKTSKDKK-TTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCAC 464
+ KD++ + YN II+ L GL A+ + E M+ PD +T+ LL
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 465 GHSGLVDEGKKPFESM--STVYGVNPQMEHYGCVVDLLGRGGLLSEA---YHLILNMPFK 519
G +DE K M + Y +P + Y ++ L + L +A Y L++
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSY-TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 520 ANAVIWRALLSACKVHGDVELA 541
+ V LL++ GDV A
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKA 478
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 186/479 (38%), Gaps = 37/479 (7%)
Query: 11 SYD--RVKALLASSCRTIQQ--ALQIQAHMVVTGLHHDLFLSTALISFFATNHR---ALR 63
SYD L+ CR Q AL + M+ G D+ ++L++ + R A+
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 64 HSLRLFSLVTNPDLFLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCA 123
++F + P+ +N +I L + FT+ ++
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 124 NARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCV 179
L L L + K + + V + ++ C +++ ++A +F +M + + V
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 180 SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA---------CSSLEDQR 230
+YN +I GR + ++L DM I P+ T L+ A L D+
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 231 VGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLV 290
+ R + ++ + N ++ +D AK + E ++S ++ V + +L+
Sbjct: 352 IKRSIDPDIFTYSSLI--NGFCMHDRLD-EAK----HMFELMIS--KDCFPNVVTYNTLI 402
Query: 291 SAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMK 346
+ VE LF +M +R + V++ +I G AG +
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 347 PDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTAL 406
PD + L + G LE + +Y ++ + + M K G ++
Sbjct: 463 PDIITYSILLDGLCKYGKLEKAL-VVFEYLQKSKMEPDIYTYNIMIEGM-CKAGKVEDGW 520
Query: 407 DVFCKTSKD--KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCA 463
D+FC S K I+Y ++ISG GL + A LF EM+ G +P+ T+ L+ A
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/425 (19%), Positives = 179/425 (42%), Gaps = 21/425 (4%)
Query: 122 CANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRD---- 177
C ++ P L L + ++K + + ++LL+ YC + A + +QM V +
Sbjct: 126 CRRSQLP-LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 178 CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG 237
V++N +I+G +A ++ ++ M G +PD +T T+++ D + +
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD--IDLALSL 242
Query: 238 LVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNG--KSVVAAWTSLVSAYAS 295
L E G + + ++ ++D + A + + + N + V + SL+ +
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 296 RGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVD 351
G A RL M ER +VV+++A+I + G + PD
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 352 VVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK 411
+ ++ L+ + H+ + C N ++ + K ++ +++F +
Sbjct: 363 YSSLINGFCMHDRLDEAK--HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 412 TSKDK--KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
S+ T+ YN++I GL G A +F++M G+ PD +T+ LL G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKA---NAVIWR 526
+++ FE + + P + Y +++ + + G + + + L ++ K N +I+
Sbjct: 481 LEKALVVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 527 ALLSA 531
++S
Sbjct: 540 TMISG 544
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 153/376 (40%), Gaps = 48/376 (12%)
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLL---------SACSSLE 227
D SYN++IN F R + ++ VLG M G PD TL +LL S +L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 228 DQRVGRQ-----------VHGLVYRE--------------LGCLGDNALLVNALVDMYAK 262
DQ + +HGL GC D +V+ K
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD-LFTYGTVVNGLCK 232
Query: 263 CGCLELAERVVSGVRNGK--SVVAAWTSLVSAYASRGDVEVARRLFDQMGER----DVVS 316
G ++LA ++ + GK + V +T+++ A + +V A LF +M + +VV+
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 317 WTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYA 376
+ ++I + G + P+ V A + + G L +++ +
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 377 AENWHCGQNGGFT-CAVVDMYAKCGSIDTALDVF-CKTSKD-KKTTILYNSIISGLAHHG 433
+ FT ++++ + +D A +F SKD + YN++I G
Sbjct: 353 KRSI---DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 434 LGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHY 493
+ + LF EM GLV + VT+ L+ +G D +K F+ M + GV P + Y
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPDIITY 468
Query: 494 GCVVDLLGRGGLLSEA 509
++D L + G L +A
Sbjct: 469 SILLDGLCKYGKLEKA 484
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 109/519 (21%), Positives = 192/519 (36%), Gaps = 40/519 (7%)
Query: 40 GLHHDLFLSTALISFFATNHRALRHSLRLFSLVT----NPDLFLWNAIIKAH-SLSPNHA 94
G D++ T+LIS FA + R R ++ +F + P L +N I+ +
Sbjct: 203 GFSLDVYSYTSLISAFANSGR-YREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261
Query: 95 FXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALL 154
+T+ L+ C Q+ + + F NALL
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 155 HFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIR 210
Y A KV +M + V+YN +I+ + R G +M++ M G +
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 211 PDEYTLVTLLSACSSLEDQRVGRQVHGL-VYREL---GCLGDNALLVNALVDMYAKCGCL 266
PD +T TLLS +R G+ + ++ E+ GC N NA + MY G
Sbjct: 382 PDVFTYTTLLSGF-----ERAGKVESAMSIFEEMRNAGC-KPNICTFNAFIKMYGNRGKF 435
Query: 267 ELAERVVSGVR--NGKSVVAAWTSLVSAYASRG-DVEVARRLFDQMGERDVV----SWTA 319
++ + + W +L++ + G D EV+ +F +M V ++
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS-GVFKEMKRAGFVPERETFNT 494
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
+IS YS G + PD L+ AR G E ++ + E+
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE--MED 552
Query: 380 WHCGQNGGFTCAVVDMYAKCGSI----DTALDVFCKTSKDKKTTILYNSIISGLAHHGLG 435
C N C+++ YA I A +V+ + + +L +++ + L
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR--AVLLKTLVLVCSKCDLL 610
Query: 436 KYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGC 495
A F E++ G PD T +++ G +V + + M G P M Y
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE-RGFTPSMATYNS 669
Query: 496 VVDLLGRG---GLLSEAYHLILNMPFKANAVIWRALLSA 531
++ + R G E IL K + + + ++ A
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 101/498 (20%), Positives = 186/498 (37%), Gaps = 42/498 (8%)
Query: 27 QQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTN---PDLFLWNAI 83
Q+A Q+ M G +D AL+ + +HR L +V N P + +N++
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 84 IKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
I A++ FT+ LL A + + + +
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPV----RDCVSYNMMINGFVRAGRAGCSMK 199
++ NA + Y K+F+++ V D V++N ++ F + G
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 200 VLGDMRGFGIRPDEYTLVTLLSA---CSSLEDQRVGRQVHGLVYRELGCLGDNALL--VN 254
V +M+ G P+ T TL+SA C S E VYR + G L N
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT-------VYRRMLDAGVTPDLSTYN 528
Query: 255 ALVDMYAKCGCLELAERVVSGVRNG--KSVVAAWTSLVSAYASRGDV----EVARRLFDQ 308
++ A+ G E +E+V++ + +G K + SL+ AYA+ ++ +A ++
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG 588
Query: 309 MGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
+ E V ++ S PD + L+ + G
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD----ITTLNSMVSI----YG 640
Query: 369 RRIHLKYAAENWHCGQNGGFTCAVVD------MYAKCGSIDTALDVFCKT-SKDKKTTIL 421
RR + A + GFT ++ M+++ + ++ + +K K I+
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 422 -YNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM 480
YN++I + + A +F EMR G+VPD +T+ + + + +E M
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 481 STVYGVNPQMEHYGCVVD 498
+G P Y +VD
Sbjct: 761 -IKHGCRPNQNTYNSIVD 777
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 135/316 (42%), Gaps = 35/316 (11%)
Query: 248 DNALLVNALVDMYAKCGCLELAERVVSGVR-NGKSV-VAAWTSLVSAYASRGDVEVARRL 305
DN++ V ++ M K G + A + +G++ +G S+ V ++TSL+SA+A+ G A +
Sbjct: 172 DNSV-VAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 306 FDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVA----ALS 357
F +M E ++++ +++ + G MK D + A L
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMG----TPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
Query: 358 ECARLGALELGRRIHLKYAAENWHCGQNGGFT------CAVVDMYAKCGSIDTALDVFCK 411
C + G+L + AA+ + + GF+ A++D+Y K A+ V +
Sbjct: 287 TCCKRGSLH-------QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 412 TSKD--KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
+ + + YNS+IS A G+ A+ L +M G PD T+ LL +G
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP---FKANAVIWR 526
V+ FE M G P + + + + G G +E + + + V W
Sbjct: 400 VESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 527 ALLSACKVHG-DVELA 541
LL+ +G D E++
Sbjct: 459 TLLAVFGQNGMDSEVS 474
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 174/418 (41%), Gaps = 27/418 (6%)
Query: 118 LLKSC-ANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR 176
LL +C + P+L ++K F + +L++ +C+ A + QM
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 177 ----DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA-CSSLEDQRV 231
D V Y +I+ + G ++ + M +GIRPD +L++ C+S +
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 232 GRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSL 289
+ G+ R+ + + + NAL+D + K G AE + + + + + +TSL
Sbjct: 232 DSLLRGMTKRK---IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 290 VSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXM 345
++ + G V+ AR++F M + DVV++T++I+G+ +
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 346 KPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKC--GSID 403
+ + + ++G + + + + G V ++ C G +
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR----GVPPNIRTYNVLLHCLCYNGKVK 404
Query: 404 TALDVFCKTSKDKKTTI-----LYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFV 458
AL +F K + + YN ++ GL ++G + A+ +FE+MR + +T+
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 459 ALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM 516
++ +G V F S+ + GV P + Y ++ L R GL EA+ L M
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPS-KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 159/419 (37%), Gaps = 59/419 (14%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM- 173
F LL A + + + L HL ++ N L++ +C + A +M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 174 -----PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLED 228
P D V++ +INGF R +M ++ M GI+PD
Sbjct: 135 KLGFEP--DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD---------------- 176
Query: 229 QRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNG--KSVVAAW 286
++ ++D K G + A + + N + V +
Sbjct: 177 ---------------------VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 287 TSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
TSLV+ + G A L M +R DV+++ A+I + G
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 343 XXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSI 402
+ P+ + ++ G ++ R++ Y E C + ++++ + KC +
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMF--YLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 403 DTALDVFCKTSKDKKT--TILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVAL 460
D A+ +F + S+ T TI Y ++I G G A +F M G+ P+ T+ L
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 461 L-CACGHSGLVDEGKKPFESMST--VYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM 516
L C C ++G V + FE M + GV P + Y ++ L G L +A + +M
Sbjct: 394 LHCLC-YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 124/309 (40%), Gaps = 30/309 (9%)
Query: 26 IQQALQIQAHMVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTN----PDLFLWN 81
+++A+ + MV G+ D+ + T +I N + ++L LF + N PD+ ++
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH-VNYALSLFDQMENYGIRPDVVMYT 216
Query: 82 AIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKS 141
+++ S TF L+ + +L+ +++
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 142 RFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC----VSYNMMINGFVRAGRAGCS 197
++F +L++ +C+ A ++F M + C V+Y +INGF + + +
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 198 MKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHG-LVYRE-----------LGC 245
MK+ +M G+ + T TL+ + V ++V +V R L C
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 246 LGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRL 305
L N + AL+ ++ +R + GV + + L+ G +E A +
Sbjct: 397 LCYNGKVKKALMIFE------DMQKREMDGVAPN---IWTYNVLLHGLCYNGKLEKALMV 447
Query: 306 FDQMGERDV 314
F+ M +R++
Sbjct: 448 FEDMRKREM 456
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 172/436 (39%), Gaps = 48/436 (11%)
Query: 162 DAHNAYKVFEQMPVRDC----VSYNMMINGFVRAGRAGCSMKVLGDMR--GFGIRP---- 211
D K++ +M R+ V+YN++INGF + G+ + + GDMR GF + P
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 312
Query: 212 ---DEYTLVTLLSACSSLEDQRVGRQVHGLVYR---------ELGCLGDNALLV------ 253
+ Y L + D+ + ++ + G + D L+
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP 372
Query: 254 -----NALVDMYAKCGCLELAERVVSGVRNGK--SVVAAWTSLVSAYASRGDVEVARRLF 306
N L+ Y K G A + +R G + + +L+ G++E A+RL
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 307 DQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARL 362
++M + DV+++T ++ G+ G +KPD RL
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 363 GALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTT--I 420
G + R+H + A + H + +D K G++ A++ K + +
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVR-IDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 421 LYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESM 480
Y ++I G +G K A L++EM L P +T+ L+ +G +++ + M
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 611
Query: 481 STVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP---FKANAVIWRALLSA-CKVHG 536
GV P + + ++ + + G + EAY + M N + L+S C
Sbjct: 612 KK-RGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 537 DVELAKLACQELLAVE 552
E+ KL +E+L E
Sbjct: 671 WEEVVKLY-KEMLDKE 685
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 122/339 (35%), Gaps = 68/339 (20%)
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRAGCSMK 199
H + N L+ C + A ++ E+M + D ++Y ++ GFV+ G + +
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
Query: 200 VLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNA---LLVNAL 256
V +M GI+PD Y T L D ++H E+ +A + N
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH----EEMVATDHHAPDLTIYNVR 521
Query: 257 VDMYAKCGCLELAERVVSGVRNGKSVV--------AAWTSLVSAYASRGDVEVARRLFDQ 308
+D K G L V + + + +T+++ Y G ++AR L+D+
Sbjct: 522 IDGLCKVGNL------VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Query: 309 MGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGA 364
M + V+++ +I G++ AG ++P+ ++ A L
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN------VMTHNALLYG 629
Query: 365 LELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILY 422
+ K G+ID A CK ++ Y
Sbjct: 630 M-------------------------------CKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Query: 423 NSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALL 461
+IS + + L++EM + PDG T AL
Sbjct: 659 TMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 113/562 (20%), Positives = 228/562 (40%), Gaps = 61/562 (10%)
Query: 27 QQALQIQAHMVVTGLHHDLFLSTALISFFATNHR---ALRHSLRLFSLVTNPDLFLWNAI 83
+ + + M G+ HDL+ + I+ F + AL ++ L PD+ +++
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 84 IKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRF 143
+ + S + FTF L+ + L +V+
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 144 HSHVFVANALLHFYCVFRDAHNAYKVFEQMPV----RDCVSYNMMINGFVRAGRAGCSMK 199
+ +++ C D A + ++M D V YN +I+G + ++
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 200 VLGDMRGFGIRPDEYTLVTLLSA-CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVD 258
+ +M GIRPD +T +L+S C+ R + ++ R+ + N + +AL+D
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALID 336
Query: 259 MYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD--- 313
+ K G L AE++ + R+ + ++SL++ + ++ A+ +F+ M +D
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 314 -VVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH 372
VV+++ +I G+ A + +E +EL R +
Sbjct: 397 NVVTYSTLIKGFCKAK-----------------RVEE--------------GMELFREM- 424
Query: 373 LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK-TSKDKKTTIL-YNSIISGLA 430
++ G +T ++ + + D A VF + S IL YN ++ GL
Sbjct: 425 ----SQRGLVGNTVTYT-TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 431 HHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQM 490
+G A+ +FE ++ + PD T+ ++ +G V++G + F ++S + GV+P +
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS-LKGVSPNV 538
Query: 491 EHYGCVVDLLGRGGLLSEAYHLILNMPFKA---NAVIWRALLSACKVHGDVELAKLACQE 547
Y ++ R G EA L+ M N+ + L+ A GD E + +E
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 548 LLAVEHDHGARYV-MLSNMLAD 568
+ + A + +++NML D
Sbjct: 599 MRSCGFAGDASTIGLVTNMLHD 620
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 142/373 (38%), Gaps = 36/373 (9%)
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPV----RDCVSYNMMIN 186
+ L +VKSR + N LL + EQM D +Y++ IN
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 187 GFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA-CSSLEDQRVGRQVHGLVYRELGC 245
F R + ++ VL M G PD TL +LL+ C S V +V E+G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV--EMGY 184
Query: 246 LGDNALLVNALVDMYAKCGCLELAERVVSGVRNG-KSVVAAWTSLVSAYASRGDVEVARR 304
D + ++ E V V+ G + + + ++V+ RGD+++A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 305 LFDQMG----ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALS--- 357
L +M E DVV + +I G + ++PD + +S
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 358 ------ECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTA---LDV 408
+ +RL + + R+I+ N A++D + K G + A D
Sbjct: 305 NYGRWSDASRLLSDMIERKIN-----------PNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 409 FCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSG 468
K S D Y+S+I+G H A +FE M P+ VT+ L+ +
Sbjct: 354 MIKRSIDPDI-FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 469 LVDEGKKPFESMS 481
V+EG + F MS
Sbjct: 413 RVEEGMELFREMS 425
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 177/501 (35%), Gaps = 26/501 (5%)
Query: 23 CRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHR---ALRHSLRLFSLVTNPDLFL 79
CR + A ++ G D + LI+ R AL R+ + P L
Sbjct: 120 CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLV 139
NA++ L+ + T+ +LK + L ++L +
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 140 KSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRAG 195
+ + + ++ C NA+ +F +M ++ D + Y +I GF AGR
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 196 CSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNA 255
K+L DM I PD L+ R ++H + + + + + +
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR--GISPDTVTYTS 357
Query: 256 LVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER- 312
L+D + K L+ A ++ + + + + L++ Y ++ LF +M R
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 313 ---DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGR 369
D V++ +I G+ G ++PD V L G E
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 370 RIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK-----TSKDKKTTILYNS 424
I K E + G ++ +D A D+FC D KT YN
Sbjct: 478 EIFEKI--EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT---YNI 532
Query: 425 IISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVY 484
+I GL G A LF +M G P+G T+ L+ A G + K E +
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC- 591
Query: 485 GVNPQMEHYGCVVDLLGRGGL 505
G + VVD+L G L
Sbjct: 592 GFSVDASTVKMVVDMLSDGRL 612
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 173/427 (40%), Gaps = 31/427 (7%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
+T ++ C R L ++K + + L++ C+ A ++ ++
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDR 167
Query: 173 M------PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA-CSS 225
M P ++ N ++NG G+ ++ ++ M G +P+E T +L C S
Sbjct: 168 MVEMGHKPT--LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 226 LEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSG--VRNGKSVV 283
+ + + R++ +A+ + ++D K G L+ A + + ++ K+ +
Sbjct: 226 GQTALAMELLRKMEERKIKL---DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 284 AAWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXX 339
+T+L+ + G + +L M +R DVV+++A+I + G
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 340 XXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKC 399
+ PD V + + + L+ H+ + CG N +++ Y K
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKAN--HMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 400 GSIDTALDVFCKTSKDK--KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTF 457
ID L++F K S T+ YN++I G G + A LF+EM + PD V++
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 458 VALLCACGHSGLVDEG--KKPFESMSTVYGVNPQME--HYGCVVDLLGRGGLLSEAYHLI 513
LL GL D G +K E + +++ Y ++ + + +A+ L
Sbjct: 461 KILL-----DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 514 LNMPFKA 520
++P K
Sbjct: 516 CSLPLKG 522
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 182/456 (39%), Gaps = 20/456 (4%)
Query: 23 CRTIQQ--ALQIQAHMVVTGLHHDLFLSTALISFFATNHR---ALRHSLRLFSLVTNPDL 77
CR Q AL + A M+ G D+ ++L++ + + R A+ ++ + PD
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 78 FLWNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCH 137
F + +I L + T+ ++ L L L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGR 193
+ +R ++V + N ++ C +R A +F +M + + V+YN +IN GR
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 194 AGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLV 253
+ ++L +M I P+ T L+ A ++H + + + + +
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR--SIDPDTITY 366
Query: 254 NALVDMYAKCGCLELAERVVSGVRNGKSV--VAAWTSLVSAYASRGDVEVARRLFDQMGE 311
N L++ + L+ A+++ + + + + + +L++ + VE LF +M +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 312 R----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALEL 367
R + V++T +I G+ AG + D + L G L+
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 368 GRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIIS 427
I KY ++ N +++ K G + A D+FC S K + YN++IS
Sbjct: 487 ALVI-FKYLQKS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI-KPDVVTYNTMIS 543
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCA 463
GL L + A LF +M+ G +P+ T+ L+ A
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/421 (19%), Positives = 174/421 (41%), Gaps = 31/421 (7%)
Query: 130 LGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMI 185
L L + ++K + + ++LL+ YC + +A + +QM D ++ +I
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 186 NGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGC 245
+G +A ++ ++ M G +PD T T+++ D + ++ L E
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD--IDLALNLLNKMEAAR 253
Query: 246 LGDNALLVNALVDMYAKCGCLELA-----ERVVSGVRNGKSVVAAWTSLVSAYASRGDVE 300
+ N ++ N ++D K +E+A E G+R V + SL++ + G
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN---VVTYNSLINCLCNYGRWS 310
Query: 301 VARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAAL 356
A RL M E+ +VV++ A+I + G + PD + +
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 357 SECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDK 416
+ L+ +++ +++ C N +++ + KC ++ +++F + S+
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKD--CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 417 --KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
T+ Y +II G G A +F++M + D +T+ LL G +D
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 475 KPFESMSTVYGVNPQMEH----YGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRALLS 530
F+ Y +ME Y +++ + + G + EA+ L ++ K + V + ++S
Sbjct: 489 VIFK-----YLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMIS 543
Query: 531 A 531
Sbjct: 544 G 544
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 112/276 (40%), Gaps = 30/276 (10%)
Query: 285 AWTSLVSAYASRGDVEVARRLFDQMG----ERDVVSWTAMISGYSHAGYXXXXXXXXXXX 340
++ ++ + R + +A + +M E D+V+ +++++GY H+
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 341 XXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTC--------AV 392
KPD + G +H K + Q C V
Sbjct: 180 VEMGYKPDTFTFTTLIH----------GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 393 VDMYAKCGSIDTALDVFCK--TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL 450
V+ K G ID AL++ K ++ K +++N+II L + + A+ LF EM G+
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 451 VPDGVTFVALL-CACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEA 509
P+ VT+ +L+ C C + D + S +NP + + ++D + G L EA
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASR--LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 510 YHL---ILNMPFKANAVIWRALLSACKVHGDVELAK 542
L ++ + + + L++ +H ++ AK
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 157/402 (39%), Gaps = 56/402 (13%)
Query: 146 HVFVANALLHFYCVFRDAHNAYKVFEQMP-----VRDCVSYNMMINGFVRAGRAGCSMKV 200
+ + N L+H + +A V M V D +YN +I G+ + G G +++V
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 201 LGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMY 260
L DMR G +P+ Y+ LVD +
Sbjct: 412 LHDMRNKGCKPNVYSYTI-------------------------------------LVDGF 434
Query: 261 AKCGCLELAERVVSGVRNG--KSVVAAWTSLVSAYASRGDVEVARRLFDQMGER----DV 314
K G ++ A V++ + K + L+SA+ + A +F +M + DV
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLK 374
++ ++ISG + + V ++ R G ++ R++ +
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 375 YAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILYNSIISGLAHH 432
+ + +++ + G +D A +F K +D + I N +I+GL
Sbjct: 555 MVFQGSPLDEIT--YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612
Query: 433 GLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEH 492
G+ + A+ +EM L G PD VTF +L+ +G +++G F + G+ P
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA-EGIPPDTVT 671
Query: 493 YGCVVDLLGRGGLLSEAYHLI---LNMPFKANAVIWRALLSA 531
+ ++ L +GG + +A L+ + F N W LL +
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 157/392 (40%), Gaps = 22/392 (5%)
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCVS----YNMMINGFVRAGR 193
++ + +F ++ +C + +A + M CV Y +I+ + R
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 194 AGCSMKVLGDMRGFGIRPDEYTLV-TLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALL 252
++++L +M G PD T +L C + V+ ++ R + +
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA---PDDIT 324
Query: 253 VNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER 312
L++ K G ++ A+ + R K + + +L+ + + G ++ A+ + M
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLF--YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 313 -----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALEL 367
DV ++ ++I GY G KP+ + +LG ++
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 368 GRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILYNSI 425
+ + +A+ GF C ++ + K I A+++F + + K +NS+
Sbjct: 443 AYNVLNEMSADGLK-PNTVGFNC-LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 426 ISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYG 485
ISGL K+A+ L +M G+V + VT+ L+ A G + E +K M V+
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM--VFQ 558
Query: 486 VNPQME-HYGCVVDLLGRGGLLSEAYHLILNM 516
+P E Y ++ L R G + +A L M
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 143/355 (40%), Gaps = 34/355 (9%)
Query: 130 LGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMI 185
L L L + ++ + V + N ++ C +R +A +F++M + + V+Y+ +I
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 186 NGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA---------CSSLEDQRVGRQVH 236
+ GR + ++L DM I P+ T L+ A L D + R +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYA 294
++ N+LV+ + L+ A+++ + ++ V + +L+ +
Sbjct: 363 PDIFT-----------YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 295 SRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEV 350
VE LF +M R D V++T +I G H G + PD +
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC 410
L G LE + + + + + +++ K G +D D+FC
Sbjct: 472 TYSILLDGLCNNGKLE--KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 411 KTSKD--KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCA 463
S K + YN++ISGL L + A L ++M+ G +P+ T+ L+ A
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/448 (19%), Positives = 179/448 (39%), Gaps = 21/448 (4%)
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC----VSYNMMINGFVRAG 192
+V+ + L+H + A A + ++M R C V+Y +++NG + G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 193 RAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALL 252
++ +L M I D T++ + + V ++ E + N +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY--RHVDDALNLFKEMETKGIRPNVVT 297
Query: 253 VNALVDMYAKCGCLELAERVVSGVRNGK--SVVAAWTSLVSAYASRGDVEVARRLFDQMG 310
++L+ G A +++S + K + + +L+ A+ G A +L+D M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 311 ER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALE 366
+R D+ ++ ++++G+ PD V + + +E
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 367 LGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILYNS 424
G + + + G +T + ++ G D A VF + D + Y+
Sbjct: 418 DGTEL-FREMSHRGLVGDTVTYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 425 IISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVY 484
++ GL ++G + A+ +F+ M+ + D + ++ +G VD+G F S+S +
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-LK 534
Query: 485 GVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKA---NAVIWRALLSACKVHGDVELA 541
GV P + Y ++ L LL EAY L+ M N+ + L+ A GD +
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS 594
Query: 542 KLACQELLAVEHDHGARYV-MLSNMLAD 568
+E+ + A + +++NML D
Sbjct: 595 AELIREMRSCRFVGDASTIGLVANMLHD 622
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 166/424 (39%), Gaps = 56/424 (13%)
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDCV----SYNMMINGFVRAGR 193
+VKSR + N LL + + E+M + V +YN++IN F R +
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 194 AGCSMKVLGDMRGFGIRPDEYTLVTLL---------SACSSLEDQRV-----------GR 233
++ +LG M G P TL +LL S +L DQ V
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 234 QVHGLVYR--------------ELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNG 279
+HGL + GC N + +V+ K G +LA +++ +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 280 K--SVVAAWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXX 333
K + V + +++ + V+ A LF +M + +VV+++++IS G
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 334 XXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGFTC 390
+ P+ V A + + G +++ +K + + N
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN----- 369
Query: 391 AVVDMYAKCGSIDTALDVF-CKTSKD-KKTTILYNSIISGLAHHGLGKYAITLFEEMRLL 448
++V+ + +D A +F SKD + YN++I G + LF EM
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 449 GLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSE 508
GLV D VT+ L+ H G D +K F+ M + GV P + Y ++D L G L +
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 509 AYHL 512
A +
Sbjct: 489 ALEV 492
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 183/464 (39%), Gaps = 92/464 (19%)
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVH 236
D S+ ++I+ F R R ++ VLG M G P T +LL H
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLL---------------H 149
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNG-KSVVAAWTSLVSAYAS 295
G LVN + D ++ V+ V++G + V + +L+
Sbjct: 150 GFC------------LVNRIGDAFS---------LVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 296 RGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVD 351
G++ +A L ++M ++ DVV++ +++G ++G + PD V
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 352 VVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK 411
FT A++D++ K G++D A +++ +
Sbjct: 249 ------------------------------------FT-ALIDVFVKQGNLDEAQELYKE 271
Query: 412 --TSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGL 469
S + YNSII+GL HG A F+ M G P+ VT+ L+ +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 470 VDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHL---ILNMPFKANAVIWR 526
VDEG K F+ MS G N + Y ++ + G L A + +++ + +
Sbjct: 332 VDEGMKLFQRMS-CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 527 ALLSACKVHGDVELAKLACQELLAVEHDHG-ARYVMLSNMLADMDQHDEAASVRKAIDNV 585
LL V+G++E A + ++ E G Y ++ + L D+ ++A + +
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450
Query: 586 GIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLRDINMGV 629
G+ KP +Y M L K+ P +A EL+ R G+
Sbjct: 451 GV-KPDARTYTIM------ILGLCKNGPRREADELIRRMKEEGI 487
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 140/372 (37%), Gaps = 58/372 (15%)
Query: 138 LVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGR 193
+VKS + +V V N L+ C + + A ++ +M + D V+YN ++ G +GR
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 194 AGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYREL--GCLGDNAL 251
+ ++L DM I PD T L+ + ++ +Y+E+ + N +
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE----LYKEMIQSSVDPNNV 282
Query: 252 LVNALVDMYAKCGCLELAERVVS--GVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
N++++ G L A++ + V + +L+S + V+ +LF +M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 310 G----ERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGAL 365
D+ ++ +I GY G + PD ++ C L L
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD------IITHCILLHGL 396
Query: 366 ELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKT--TILYN 423
+ G I++AL F + +K + YN
Sbjct: 397 CVN-------------------------------GEIESALVKFDDMRESEKYIGIVAYN 425
Query: 424 SIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVAL---LCACGHSGLVDEGKKPFESM 480
+I GL + A LF + + G+ PD T+ + LC G DE + +
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 481 STVYGVNPQMEH 492
+ +N + +H
Sbjct: 486 GIICQMNAEDDH 497
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 160/397 (40%), Gaps = 57/397 (14%)
Query: 166 AYKVFEQMPVR----DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLS 221
A VF++M VR D SY +M+ G R G+ + + L M G PD T +L+
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 222 ACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN--ALVDMYAKCGCLELA-ERVVSGVRN 278
A E+ V R + +R++ LG L+N +L+D K G ++ A E + VRN
Sbjct: 261 ALC--ENGLVNRAI--WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 316
Query: 279 G-KSVVAAWTSLVSAYASRGDVEVARRLFDQMGERD-----VVSWTAMISGYSHAGYXXX 332
G K V T+L+ RG E A RLF ++ D V ++T+MI GY
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 333 XXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGR---------------RIHLKYAA 377
+ P+ ++ + G+ GR I+ AA
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF--GRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 378 ENWHCGQ----------NGGFTCAV----------VDMYAKCGSIDTALDVFCKTSKD-- 415
+ C + N F+C + + K I+ AL FC+ +K
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 416 KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKK 475
+ L N +I+ K + LF+ + LGL+P T+ +++ G +D K
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 476 PFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHL 512
F +M +G P YG ++ L + ++ EA L
Sbjct: 555 YFHNMKR-HGCVPDSFTYGSLISGLCKKSMVDEACKL 590
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 142/355 (40%), Gaps = 34/355 (9%)
Query: 130 LGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMI 185
L L + ++ + V + N ++ C +R +A +F++M + + V+Y+ +I
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 186 NGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA---------CSSLEDQRVGRQVH 236
+ GR + ++L DM I P+ T L+ A L D + R +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 237 GLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYA 294
++ N+L++ + L+ A+++ + ++ + + +L+ +
Sbjct: 288 PDIFT-----------YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 295 SRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEV 350
VE LF +M R D V++T +I G H G + PD +
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 351 DVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFC 410
L G LE + + + + + +++ K G +D D+FC
Sbjct: 397 TYSILLDGLCNNGKLE--KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 411 KTSKD--KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCA 463
S K + YN++ISGL L + A L ++M+ G +PD T+ L+ A
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 172/426 (40%), Gaps = 45/426 (10%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
F F LL + A + L + L + + +++ N L++ +C A + +
Sbjct: 11 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 70
Query: 173 M------PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLL------ 220
M P V+ + ++NG+ R ++ ++ M G RPD T TL+
Sbjct: 71 MMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 221 ---SACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR 277
S +L D+ V R GC N + +V+ K G ++LA +++ +
Sbjct: 129 NKASEAVALVDRMVQR----------GC-QPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 278 NGK--SVVAAWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXX 331
K + V + +++ + V+ A LF +M + +VV+++++IS G
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 332 XXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIH---LKYAAENWHCGQNGGF 388
+ P+ V A + + G ++H +K + + N
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN--- 294
Query: 389 TCAVVDMYAKCGSIDTALDVF-CKTSKDKKTTI-LYNSIISGLAHHGLGKYAITLFEEMR 446
++++ + +D A +F SKD + YN++I G + LF EM
Sbjct: 295 --SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 447 LLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLL 506
GLV D VT+ L+ H G D +K F+ M + GV P + Y ++D L G L
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKL 411
Query: 507 SEAYHL 512
+A +
Sbjct: 412 EKALEV 417
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 177/451 (39%), Gaps = 67/451 (14%)
Query: 114 TFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM 173
T LL R L ++L +V V++ ++ C +D A ++ M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 174 PVRDC----VSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQ 229
C V YN++I+G + + ++ + D+ G ++PD T TL+ +++
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 230 RVGRQVHGLVYRELGCL--GDNALLVNALVDMYAKCGCLE----LAERVVS-GVRNGKSV 282
+G ++ E+ CL + V++LV+ K G +E L +RVV GV
Sbjct: 314 EIGLEMMD----EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN--- 366
Query: 283 VAAWTSLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXX 342
+ + +L+ + A LFD+MG+
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGK------------------------------- 395
Query: 343 XXMKPDEVDVVAALSECARLGALE-----LGRRIH--LKYAAENWHCGQNGGFTCAVVDM 395
++P++V + R G L+ LG + LK + ++ NG C D+
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING--HCKFGDI 453
Query: 396 YAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGV 455
A G + ++ K + T + Y S++ G G A+ L+ EM G+ P
Sbjct: 454 SAAEGFMAEMIN-----KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 456 TFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILN 515
TF LL +GL+ + K F M+ + V P Y +++ G +S+A+ +
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 516 MPFKA---NAVIWRALLSACKVHGDVELAKL 543
M K + +R L+ + G AK+
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 168/417 (40%), Gaps = 31/417 (7%)
Query: 146 HVFVANALLHFYCVFRDAHNAYKVFEQMPV----RDCVSYNMMINGFVRAGRAGCSMKVL 201
++FV NAL+ C R H A +F++M + V+Y+++I+ F R G+ ++ L
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 202 GDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYA 261
G+M G++ Y +L++ D + + L + +L+ Y
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK--LEPTVVTYTSLMGGYC 483
Query: 262 KCGCLELAERVVSGVRNGKSV---VAAWTSLVSAYASRGDVEVARRLFDQMGERDV---- 314
G + A R+ + GK + + +T+L+S G + A +LF++M E +V
Sbjct: 484 SKGKINKALRLYHEM-TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLK 374
V++ MI GY G + PD + G G+ K
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH-----GLCLTGQASEAK 597
Query: 375 YAAENWH---CGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTT---ILYNSIISG 428
+ H C N ++ + + G ++ AL V C+ + + Y +I G
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV-CQEMVQRGVDLDLVCYGVLIDG 656
Query: 429 LAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNP 488
H K L +EM GL PD V + +++ A +G E ++ M G P
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN-EGCVP 715
Query: 489 QMEHYGCVVDLLGRGGLLSEAYHLILNM-PFKA--NAVIWRALLSACKVHGDVELAK 542
Y V++ L + G ++EA L M P + N V + L G+V++ K
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVDMQK 771
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 154/404 (38%), Gaps = 61/404 (15%)
Query: 164 HNAYKVFEQM------PVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLV 217
+A K+F +M P R V+YN+MI G+ G + + L +M GI PD Y+
Sbjct: 524 RDAVKLFNEMAEWNVKPNR--VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 218 TLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVR 277
L +HGL CL A VD K C EL E
Sbjct: 582 PL---------------IHGL------CLTGQASEAKVFVDGLHKGNC-ELNE------- 612
Query: 278 NGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXX 333
+T L+ + G +E A + +M +R D+V + +I G
Sbjct: 613 ------ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 334 XXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVV 393
+KPD+V + + ++ G + + N C N AV+
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTG--DFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 394 DMYAKCGSIDTALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMR-----LL 448
+ K G ++ A +V C SK + + + N + G L K + + + + L
Sbjct: 725 NGLCKAGFVNEA-EVLC--SKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK 781
Query: 449 GLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSE 508
GL+ + T+ L+ G ++E + M GV+P Y +++ L R + +
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRM-IGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 509 AYHLILNMP---FKANAVIWRALLSACKVHGDVELAKLACQELL 549
A L +M + + V + L+ C V G++ A E+L
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 167/457 (36%), Gaps = 21/457 (4%)
Query: 23 CRTIQQALQIQAHMVVTGLHHDLFLSTALISFFATNHR---ALRHSLRLFSLVTNPDLFL 79
CR + A ++ G D + L++ R AL R+ + P L
Sbjct: 136 CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLIT 195
Query: 80 WNAIIKAHSLSPNHAFXXXXXXXXXXXXXXXXXFTF-PYLLKSCANARTPHLGLQLHCHL 138
N ++ L+ + T+ P L C + +T L ++L +
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA-LAMELLRKM 254
Query: 139 VKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRA 194
+ + ++ C NA+ +F +M ++ D ++YN +I GF AGR
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 195 GCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVN 254
K+L DM I P+ T L+ + R Q+ + + + N + N
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYN 372
Query: 255 ALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER 312
+L+D + K LE A ++V + + + + L++ Y ++ LF +M R
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 313 DV----VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELG 368
V V++ ++ G+ +G ++PD V L G LE
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 369 RRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD--KKTTILYNSII 426
I K E + G ++ +D A D+FC K YN +I
Sbjct: 493 LEIFGKI--EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Query: 427 SGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCA 463
S L A LF +M G PD +T+ L+ A
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/412 (19%), Positives = 169/412 (41%), Gaps = 35/412 (8%)
Query: 137 HLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQM------PVRDCVSYNMMINGFVR 190
++K + + N LL+ C+ A ++ ++M P ++ N ++NG
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT--LITLNTLVNGLCL 205
Query: 191 AGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA-CSSLEDQRVGRQVHGLVYRELGCLGDN 249
G+ ++ ++ M G +P+E T +L+ C S + + + R + +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL---D 262
Query: 250 ALLVNALVDMYAKCGCLELAERVVSG--VRNGKSVVAAWTSLVSAYASRGDVEVARRLFD 307
A+ + ++D K G L+ A + + ++ K+ + + +L+ + + G + +L
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 308 QMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG 363
M +R +VV+++ +I + G + P+ + + + +
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 364 ALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDK--KTTIL 421
LE I + + C + +++ Y K ID L++F + S T+
Sbjct: 383 RLE--EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 422 YNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMS 481
YN+++ G G + A LF+EM + PD V++ LL GL D G+ E
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL-----DGLCDNGE--LEKAL 493
Query: 482 TVYGV--NPQMEH----YGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRA 527
++G +ME Y ++ + + +A+ L ++P K + RA
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 180/446 (40%), Gaps = 63/446 (14%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSH-VFVANALLHFYCVFRDAHNAY----KV 169
F L + A + L L L C ++S+ +H ++ + +++ +C R A+ K+
Sbjct: 91 FNRLFSAIAKTKQYELVLAL-CKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKI 149
Query: 170 FEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQ 229
+ D V +N ++NG R +++++ M G +P TL TL++ +
Sbjct: 150 MKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL--NG 207
Query: 230 RVGRQVHGLVYR--ELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVAA 285
+V V L+ R E G N + ++++ K G LA ++ + RN K
Sbjct: 208 KVSDAVV-LIDRMVETG-FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 286 WTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXX 341
++ ++ G ++ A LF++M + D++++ +I G+ +AG
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG------------- 312
Query: 342 XXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGS 401
+ A+L + R+I N ++D + K G
Sbjct: 313 -------------RWDDGAKLLRDMIKRKI-----------SPNVVTFSVLIDSFVKEGK 348
Query: 402 IDTALDVFCKTSKDK---KTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFV 458
+ A D K + TI YNS+I G + AI + + M G PD +TF
Sbjct: 349 LREA-DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 459 ALLCACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNM-- 516
L+ + +D+G + F MS + GV Y +V + G L A L M
Sbjct: 408 ILINGYCKANRIDDGLELFREMS-LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 517 -PFKANAVIWRALLSACKVHGDVELA 541
+ + V ++ LL +G++E A
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKA 492
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 155/396 (39%), Gaps = 25/396 (6%)
Query: 131 GLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMIN 186
GL + L + F V L++ Y A +V M + +Y+MMIN
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
Query: 187 GFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQ----RVGRQVHGLVYRE 242
GFV+ + V DM G++PD ++SA + + + +++ L +R
Sbjct: 528 GFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR- 586
Query: 243 LGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV--VAAWTSLVSAYASRGDVE 300
++ YAK G + + V +R V V + L++ + +E
Sbjct: 587 -----PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 301 VARRLFDQMGERDVV----SWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAAL 356
A + D+M V ++T ++ GY+ G + D A L
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 357 SECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD- 415
C + G ++ + + +A N +N ++D +A+ G + A D+ + K+
Sbjct: 702 KACCKSGRMQSALAVTKEMSARN--IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 759
Query: 416 -KKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGK 474
K Y S IS + G A EEM LG+ P+ T+ L+ + L ++
Sbjct: 760 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 819
Query: 475 KPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAY 510
+E M + G+ P Y C++ L ++EAY
Sbjct: 820 SCYEEMKAM-GIKPDKAVYHCLLTSLLSRASIAEAY 854
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 173/426 (40%), Gaps = 70/426 (16%)
Query: 147 VFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRAGCSMKVLG 202
VF N ++ C D A +FE+M R D V+YN MI+GF + GR ++
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 203 DMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYREL--GCLGDNALLVNALVDMY 260
+M+ PD T L++ +G + YRE+ L N + + LVD +
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLE----FYREMKGNGLKPNVVSYSTLVDAF 377
Query: 261 AKCGCLELAERVVSGVRNGKSVVA--AWTSLVSAYASRGDVEVARRLFDQM----GERDV 314
K G ++ A + +R V +TSL+ A G++ A RL ++M E +V
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 315 VSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDE-----VDVVAALSECARLGALELGR 369
V++TA+I G A MK E +D + A AL
Sbjct: 438 VTYTALIDGLCDA---------------ERMKEAEELFGKMDTAGVIPNLASYNAL---- 478
Query: 370 RIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVF--CKTSKDKKTTILYNSIIS 427
IH GF K ++D AL++ K K +LY + I
Sbjct: 479 -IH--------------GF--------VKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVN 487
GL + A + EM+ G+ + + + L+ A SG EG + M + +
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL-DIE 574
Query: 488 PQMEHYGCVVDLLGRGGLLSEA---YHLILN-MPFKANAVIWRALLSACKVHGDVELAKL 543
+ + ++D L + L+S+A ++ I N +ANA I+ A++ VE A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 544 ACQELL 549
++++
Sbjct: 635 LFEQMV 640
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 103/269 (38%), Gaps = 42/269 (15%)
Query: 254 NALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGE 311
N L+ +AK G + +R + + V + ++ GDVE AR LF++M
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 312 R----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALEL 367
R D V++ +MI G+ G +PD + A ++ + G L +
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 368 GRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKDKKTTILYNSIIS 427
G + + + G VV S T +D FCK
Sbjct: 351 GLEFYREM--------KGNGLKPNVV-------SYSTLVDAFCK---------------- 379
Query: 428 GLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVN 487
G+ + AI + +MR +GLVP+ T+ +L+ A G + + + M V GV
Sbjct: 380 ----EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV-GVE 434
Query: 488 PQMEHYGCVVDLLGRGGLLSEAYHLILNM 516
+ Y ++D L + EA L M
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKM 463
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 129/332 (38%), Gaps = 54/332 (16%)
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA-CSS-LEDQRVGRQ 234
D ++YN +IN F + G+ ++ +M+G G++P+ + TL+ A C + Q +
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELA-----ERVVSGVRNGKSVVAAWTSL 289
V R +G L N +L+D K G L A E + GV V +T+L
Sbjct: 391 VD---MRRVG-LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN---VVTYTAL 443
Query: 290 VSAYASRGDVEVARRLFDQMGERDVV----SWTAMISGYSHAGYXXXXXXXXXXXXXXXM 345
+ ++ A LF +M V+ S+ A+I G+ A +
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 346 KPD---------------EVD----VVAALSEC--------------ARLGALELGRRIH 372
KPD +++ V+ + EC A + +H
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 373 LKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCKTSKD---KKTTILYNSIISGL 429
L + C ++D K + A+D F + S D + ++ ++I GL
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 430 AHHGLGKYAITLFEEMRLLGLVPDGVTFVALL 461
+ A TLFE+M GLVPD + +L+
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 18/247 (7%)
Query: 392 VVDMYAKCGSIDTALDVF--CKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLG 449
++D K G ++ A +F K T+ YNS+I G G + FEEM+ +
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 450 LVPDGVTFVALL-CACGHSGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSE 508
PD +T+ AL+ C C G + G + + M G+ P + Y +VD + G++ +
Sbjct: 328 CEPDVITYNALINCFCKF-GKLPIGLEFYREMKG-NGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 509 AYHLILNMP---FKANAVIWRALLSA-CKVHGDVELAKLACQELLAVEHDHG-ARYVMLS 563
A ++M N + +L+ A CK+ G++ A E+L V + Y L
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKI-GNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 564 NMLADMDQHDEAASVRKAIDNVGIQKPPGWSYVEMNGALHKFLAGDKSHPEAKATELMLR 623
+ L D ++ EA + +D G+ P SY N +H F+ K+ +A EL+
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVI-PNLASY---NALIHGFV---KAKNMDRALELLNE 497
Query: 624 DINMGVK 630
G+K
Sbjct: 498 LKGRGIK 504
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 118 LLKSCANARTPHLGLQLH--CHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPV 175
+LK+CA R LG Q+H CH + +++ +L+ FY FR +A V Q+
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSN 258
Query: 176 RDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLED-QRVGRQ 234
+ V++ + R G ++ +M GI+ + +L ACS + D R G+Q
Sbjct: 259 ANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQ 318
Query: 235 VHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYA 294
VH + LG D L+ L++MY K G ++ AE+V ++ S V+ W ++V++Y
Sbjct: 319 VHANAIK-LGFESD-CLIRCRLIEMYGKYGKVKDAEKVFKSSKDETS-VSCWNAMVASYM 375
Query: 295 SRGDVEVARRLFDQM 309
G A +L QM
Sbjct: 376 QNGIYIEAIKLLYQM 390
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 139/347 (40%), Gaps = 53/347 (15%)
Query: 115 FPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALL--HFYCVFRDAHNAYKVFEQ 172
+ L K A +L H++KS + N LL H C D ++F++
Sbjct: 91 YSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDI--TRQMFDR 148
Query: 173 MPVRDCVSYNMMINGFVRAGR----AGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLED 228
MP RD S+ ++ G + G A + +L + + + L +L AC+ + D
Sbjct: 149 MPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRD 208
Query: 229 QRVGRQVHGLVYRELGCLGD-NALLVNALVDMYAKCGCLELAERVVSGVRNGKSVVAAWT 287
+G+QVH L ++ LG + + ++ L +L+ Y + CLE A V+
Sbjct: 209 FELGKQVHALCHK-LGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLH------------- 254
Query: 288 SLVSAYASRGDVEVARRLFDQMGERDVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKP 347
Q+ + V+W A ++ G +K
Sbjct: 255 --------------------QLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKK 294
Query: 348 DEVDVVAALSECARLG-ALELGRRIH---LKYAAENWHCGQNGGFTCAVVDMYAKCGSID 403
+ L C+ + G+++H +K E+ + C +++MY K G +
Sbjct: 295 NVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFES-----DCLIRCRLIEMYGKYGKVK 349
Query: 404 TALDVFCKTSKDKKTTILYNSIISGLAHHGLGKYAITLFEEMRLLGL 450
A VF K+SKD+ + +N++++ +G+ AI L +M+ G+
Sbjct: 350 DAEKVF-KSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGI 395
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 138/330 (41%), Gaps = 30/330 (9%)
Query: 143 FHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRAGCSM 198
F +V L+ C R ++A ++F QM + V+YN ++ G GR G +
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 199 KVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGL-----VYRELGCLGDNALLV 253
+L DM I P+ T L+ A + ++++ + VY ++ G L+
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS---LI 300
Query: 254 NALVDMYAKCGCLELAERVVSGV-RNG---KSVVAAWTSLVSAYASRGDVEVARRLFDQM 309
N L MY G L+ A ++ + RNG V+ +T+L+ + VE ++F +M
Sbjct: 301 NGLC-MY---GLLDEARQMFYLMERNGCYPNEVI--YTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 310 GERDVV----SWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGAL 365
++ VV ++T +I GY G PD L G +
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 366 ELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDVFCK--TSKDKKTTILYN 423
E I +Y + +T + M K G ++ A D+FC + K I Y
Sbjct: 415 EKALMI-FEYMRKREMDINIVTYTIIIQGM-CKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 424 SIISGLAHHGLGKYAITLFEEMRLLGLVPD 453
++ISG GL A +LF++M+ G +P+
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 152/363 (41%), Gaps = 20/363 (5%)
Query: 177 DCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVH 236
D V++ ++NG+ R ++ + + G G +P+ T TL+ +++ + V
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC--KNRHLNHAVE 209
Query: 237 GLVYRELGCLGD--NALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVAAWTSLVSA 292
++ ++G G N + NALV + G A ++ + R + V +T+L+ A
Sbjct: 210 --LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 293 YASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXXXXXXXXXXXXMKPD 348
+ G + A+ L++ M + DV ++ ++I+G G P+
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 349 EVDVVAALSECARLGALELGRRIHLKYAAENWHCGQNGGFTCAVVDMYAKCGSIDTALDV 408
EV + + +E G +I Y N ++ Y G D A +V
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIF--YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 409 FCKTSKDKKTTIL--YNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGH 466
F + S + + YN ++ GL +G + A+ +FE MR + + VT+ ++
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 467 SGLVDEGKKPFESMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP---FKANAV 523
G V++ F S+ + G+ P + Y ++ R GL+ EA L M F N
Sbjct: 446 LGKVEDAFDLFCSLFS-KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504
Query: 524 IWR 526
+++
Sbjct: 505 VYK 507
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 157/412 (38%), Gaps = 46/412 (11%)
Query: 152 ALLHFYCVFRDAHNAYKVFEQMP-----VRDCVSYNMMINGFVRAGRAGCSMKVLGDMRG 206
AL H CVFR Y++ ++MP D + +I GF RA + V+ +
Sbjct: 81 ALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSK 140
Query: 207 FGIRPDEYTLVTLLSACSSLEDQRVGRQ----------VHGLVYRELGCLGDNALLVNAL 256
FGI+P ++L ED + R+ +HG VY G L L N +
Sbjct: 141 FGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVY-TYGILMKGLSLTNRI 198
Query: 257 VDMYAKCGCLELAERVVSGVRNGKSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVVS 316
D + ++ SGV V + +L+ A G V AR L +M E + V+
Sbjct: 199 GDGFKLLQIMK-----TSGVAPNAVV---YNTLLHALCKNGKVGRARSLMSEMKEPNDVT 250
Query: 317 WTAMISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLG----ALELGRRIH 372
+ +IS Y + PD V V + G ALE+ R+
Sbjct: 251 FNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Query: 373 LKYAAENWHCGQNGGFTC-AVVDMYAKCGSIDTALDVFCKTSKDK--KTTILYNSIISGL 429
K G+ C +V Y G + A F + + YN +I+G
Sbjct: 311 SK-------GGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGY 363
Query: 430 AHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMS---TVYGV 486
G+ A+ F +M+ + + TF L+ G D+G K E M TV+G
Sbjct: 364 CDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGA 423
Query: 487 NPQMEHYGCVVDLLGRGGLLSEAYHLILNMPFKANAVIWRA--LLSACKVHG 536
+++ Y CV+ + +A +L M + R+ L+S C+ G
Sbjct: 424 --RIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGG 473
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 116/540 (21%), Positives = 212/540 (39%), Gaps = 41/540 (7%)
Query: 36 MVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTN----PDLFLWNAIIKAHSLSP 91
+V G+ D++L T I+ F + + +++LFS + P++ +N +I +
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGK-VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 92 NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVAN 151
+ T+ L+K A+ + + K F +V V N
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 152 ALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRAGCSMKVLGDMR-- 205
L+ + + A ++ + M + +YN +I G+ + G+A + ++L +M
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC 265
GF + +T V L CS L R V ++ R + G L+ L+ K G
Sbjct: 430 GFNVNQGSFTSVICL-LCSHLMFDSALRFVGEMLLRNMSPGGG---LLTTLISGLCKHGK 485
Query: 266 LELAERVVSGVRNGKSVVAAWTS--LVSAYASRGDVEVARRLFDQMGER----DVVSWTA 319
A + N VV TS L+ G ++ A R+ ++ R D VS+
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
+ISG +KPD + + +E A +
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE--------EAIQF 597
Query: 380 WH-CGQNGG----FTCAV-VDMYAKCGSIDTALDVFCKT-SKD-KKTTILYNSIISGLAH 431
W C +NG +T +V +D K + + F + SK+ + T++YN +I
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 432 HGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQME 491
G A+ L E+M+ G+ P+ T+ +L+ V+E K FE M + G+ P +
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGLEPNVF 716
Query: 492 HYGCVVDLLGRGGLLSEAYHLILNMPFK---ANAVIWRALLSACKVHGDVELAKLACQEL 548
HY ++D G+ G + + L+ M K N + + ++ G+V A E+
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 16/228 (7%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
+T+ L+ N +Q ++ V+ + ++ C + F++
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 173 MPVRD----CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLED 228
M ++ V YN +I + R+GR ++++ DM+ GI P+ T +L+ S +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII-- 693
Query: 229 QRVGRQVHGLVYRELGCLG--DNALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVA 284
RV + L++ E+ G N AL+D Y K G + E ++ + +N
Sbjct: 694 SRV--EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 285 AWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAG 328
+T ++ YA G+V A RL ++M E+ D +++ I GY G
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 116/540 (21%), Positives = 212/540 (39%), Gaps = 41/540 (7%)
Query: 36 MVVTGLHHDLFLSTALISFFATNHRALRHSLRLFSLVTN----PDLFLWNAIIKAHSLSP 91
+V G+ D++L T I+ F + + +++LFS + P++ +N +I +
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGK-VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 92 NHAFXXXXXXXXXXXXXXXXXFTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVAN 151
+ T+ L+K A+ + + K F +V V N
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 152 ALLHFYCVFRDAHNAYKVFEQMPVR----DCVSYNMMINGFVRAGRAGCSMKVLGDMR-- 205
L+ + + A ++ + M + +YN +I G+ + G+A + ++L +M
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 206 GFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGC 265
GF + +T V L CS L R V ++ R + G L+ L+ K G
Sbjct: 430 GFNVNQGSFTSVICL-LCSHLMFDSALRFVGEMLLRNMSPGGG---LLTTLISGLCKHGK 485
Query: 266 LELAERVVSGVRNGKSVVAAWTS--LVSAYASRGDVEVARRLFDQMGER----DVVSWTA 319
A + N VV TS L+ G ++ A R+ ++ R D VS+
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 320 MISGYSHAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAEN 379
+ISG +KPD + + +E A +
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE--------EAIQF 597
Query: 380 WH-CGQNGG----FTCAV-VDMYAKCGSIDTALDVFCKT-SKD-KKTTILYNSIISGLAH 431
W C +NG +T +V +D K + + F + SK+ + T++YN +I
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 432 HGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFESMSTVYGVNPQME 491
G A+ L E+M+ G+ P+ T+ +L+ V+E K FE M + G+ P +
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGLEPNVF 716
Query: 492 HYGCVVDLLGRGGLLSEAYHLILNMPFK---ANAVIWRALLSACKVHGDVELAKLACQEL 548
HY ++D G+ G + + L+ M K N + + ++ G+V A E+
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 16/228 (7%)
Query: 113 FTFPYLLKSCANARTPHLGLQLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQ 172
+T+ L+ N +Q ++ V+ + ++ C + F++
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 173 MPVRD----CVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLED 228
M ++ V YN +I + R+GR ++++ DM+ GI P+ T +L+ S +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII-- 693
Query: 229 QRVGRQVHGLVYRELGCLG--DNALLVNALVDMYAKCGCLELAERVVSGV--RNGKSVVA 284
RV + L++ E+ G N AL+D Y K G + E ++ + +N
Sbjct: 694 SRV--EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 285 AWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAG 328
+T ++ YA G+V A RL ++M E+ D +++ I GY G
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 179/442 (40%), Gaps = 68/442 (15%)
Query: 163 AHNAYKVFEQMPVRDCVSYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSA 222
AHN Y + N+MIN F R + + VLG + G PD T TL+
Sbjct: 120 AHNIY------------TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167
Query: 223 CSSLEDQRVGRQVHGLVYR--ELGCLGDNALLVNALVDMYAKCGCLELAERVVSGV--RN 278
+ +V V LV R E GC D + N++V+ + G LA ++ + RN
Sbjct: 168 L--FLEGKVSEAVV-LVDRMVENGCQPD-VVTYNSIVNGICRSGDTSLALDLLRKMEERN 223
Query: 279 GKSVVAAWTSLVSAYASRGDVEVARRLFDQMGER----DVVSWTAMISGYSHAGYXXXXX 334
K+ V +++++ + G ++ A LF +M + VV++ +++ G AG
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Query: 335 XXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAE-------------NWH 381
+ P+ + L + G L+ ++ + + +
Sbjct: 284 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343
Query: 382 CGQNG---------------------GFTCAVVDMYAKCGSIDTALDVFCKTSKDK--KT 418
C QN FT +++ Y +D + VF SK
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFT-SLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Query: 419 TILYNSIISGLAHHGLGKYAITLFEEMRLLGLVPDGVTFVALLCACGHSGLVDEGKKPFE 478
+ Y+ ++ G G K A LF+EM G++PD +T+ LL +G +++ + FE
Sbjct: 403 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Query: 479 SMSTVYGVNPQMEHYGCVVDLLGRGGLLSEAYHLILNMP---FKANAVIWRALLSACKVH 535
+ ++ + Y +++ + +GG + +A++L ++P K N + + ++S
Sbjct: 463 DLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Query: 536 GDVELAKLACQELLAVEHDHGA 557
G + A + +++ E D A
Sbjct: 522 GSLSEANILLRKM---EEDGNA 540
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 133 QLHCHLVKSRFHSHVFVANALLHFYCVFRDAHNAYKVFEQMPVRDC----VSYNMMINGF 188
++ L + V+V NAL+ Y + A ++F M C SYN+M++ +
Sbjct: 320 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Query: 189 VRAGRAGCSMKVLGDMRGFGIRPDEYTLVTLLSACSSLEDQRVGRQVHGLVYRELGCLG- 247
RAG + V +M+ GI P + + LLSA S D + +V +E+ G
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV---TKCEAIV-KEMSENGV 435
Query: 248 -DNALLVNALVDMYAKCGCLELAERVVSGVRNGKSV--VAAWTSLVSAYASRGDVEVARR 304
+ ++N+++++Y + G E++++ + NG ++ + L++ Y G +E
Sbjct: 436 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEE 495
Query: 305 LFDQMGER----DVVSWTAMISGYSH 326
LF ++ E+ DVV+WT+ I YS
Sbjct: 496 LFVELKEKNFRPDVVTWTSRIGAYSR 521
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 28/329 (8%)
Query: 162 DAHNAYKVFEQMPVRDCV----SYNMMINGFVRAGRAGCSMKVLGDMRGFGIRPDEYTLV 217
+ A VF++M C +YN+MIN + +A ++ S K+ +MR +P+ T
Sbjct: 244 NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYT 303
Query: 218 TLLSA------CSSLEDQRVGRQVHGLVYRELGCLGDNALLVNALVDMYAKCGCLELAER 271
L++A C E+ Q G L + + NAL++ Y++ G A
Sbjct: 304 ALVNAFAREGLCEKAEEIFEQLQEDG--------LEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 272 VVSGVRNG--KSVVAAWTSLVSAYASRGDVEVARRLFDQMGERDVV----SWTAMISGYS 325
+ S +++ + A++ +V AY G A +F++M + S ++S YS
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 326 HAGYXXXXXXXXXXXXXXXMKPDEVDVVAALSECARLGALELGRRIHLKYAAENWHCGQN 385
A ++PD + + L+ RLG +I + EN C +
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE--MENGPCTAD 473
Query: 386 GGFTCAVVDMYAKCGSIDTALDVFC--KTSKDKKTTILYNSIISGLAHHGLGKYAITLFE 443
++++Y K G ++ ++F K + + + S I + L + +FE
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Query: 444 EMRLLGLVPDGVTFVALLCACGHSGLVDE 472
EM G PDG T LL AC V++
Sbjct: 534 EMIDSGCAPDGGTAKVLLSACSSEEQVEQ 562