Miyakogusa Predicted Gene

Lj0g3v0118009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0118009.1 tr|Q6PP03|Q6PP03_MIRJA Kinesin-like protein
(Fragment) OS=Mirabilis jalapa PE=2 SV=1,75,6e-19,SUBFAMILY NOT
NAMED,NULL; KINESIN LIGHT CHAIN,NULL; coiled-coil,NULL; TPR_12,NULL;
TPR_2,Tetratricop,NODE_31630_length_1006_cov_167.411530.path1.1
         (220 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27500.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   285   2e-77
AT3G27960.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   277   3e-75
AT4G10840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   262   2e-70
AT4G10840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   177   3e-45
AT2G31240.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    69   2e-12

>AT1G27500.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:9551629-9553654 REVERSE
           LENGTH=650
          Length = 650

 Score =  285 bits (729), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 138/205 (67%), Positives = 163/205 (79%)

Query: 4   VNPEEIASGLTNVSAIYESMNXXXXXXXXXXXXXXIYNDSPGQQSSIAGIEAQMGVMYYM 63
           ++PEEIASGLT++S I ESMN              IY DSPGQ+  IAGIEAQMGV+YYM
Sbjct: 438 ISPEEIASGLTDISVICESMNEVEQAITLLQKALKIYADSPGQKIMIAGIEAQMGVLYYM 497

Query: 64  LGNYTESYNTLKNAITKLRAIGEKKSSFIGIALNQMGLACVQLYAFGEATELFEEAKSIL 123
           +G Y ESYNT K+AI+KLRA G+K+S+F GIALNQMGLAC+QL A  EA ELFEEAK IL
Sbjct: 498 MGKYMESYNTFKSAISKLRATGKKQSTFFGIALNQMGLACIQLDAIEEAVELFEEAKCIL 557

Query: 124 EHEYGPYHPETLGVYSNLAGTYDAIGRLDEAIQILEYVVSVREEKLGTANPDVDDEKRRL 183
           E E GPYHPETLG+YSNLAG YDAIGRLD+AI++L +VV VREEKLGTANP  +DEKRRL
Sbjct: 558 EQECGPYHPETLGLYSNLAGAYDAIGRLDDAIKLLGHVVGVREEKLGTANPVTEDEKRRL 617

Query: 184 SELLKEAGRVRSRKVMSLENLLDAN 208
           ++LLKEAG V  RK  SL+ L+D++
Sbjct: 618 AQLLKEAGNVTGRKAKSLKTLIDSD 642


>AT3G27960.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:10380513-10382593 REVERSE
           LENGTH=663
          Length = 663

 Score =  277 bits (709), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 135/212 (63%), Positives = 164/212 (77%)

Query: 2   PGVNPEEIASGLTNVSAIYESMNXXXXXXXXXXXXXXIYNDSPGQQSSIAGIEAQMGVMY 61
           PG   EE+A+G   +SAIY+SMN              IY ++PGQQ++IAGIEAQMGV+ 
Sbjct: 446 PGTPMEEVATGFIEISAIYQSMNELDQALKLLRRALKIYANAPGQQNTIAGIEAQMGVVT 505

Query: 62  YMLGNYTESYNTLKNAITKLRAIGEKKSSFIGIALNQMGLACVQLYAFGEATELFEEAKS 121
           YM+GNY+ESY+  K+AI+K R  GEKK++  GIALNQMGLACVQ YA  EA +LFEEAK+
Sbjct: 506 YMMGNYSESYDIFKSAISKFRNSGEKKTALFGIALNQMGLACVQRYAINEAADLFEEAKT 565

Query: 122 ILEHEYGPYHPETLGVYSNLAGTYDAIGRLDEAIQILEYVVSVREEKLGTANPDVDDEKR 181
           ILE E GPYHP+TL VYSNLAGTYDA+GRLD+AI+ILEYVV  REEKLGTANP+V+DEK+
Sbjct: 566 ILEKECGPYHPDTLAVYSNLAGTYDAMGRLDDAIEILEYVVGTREEKLGTANPEVEDEKQ 625

Query: 182 RLSELLKEAGRVRSRKVMSLENLLDANARIPN 213
           RL+ LLKEAGR RS++  +L  LLD N  I N
Sbjct: 626 RLAALLKEAGRGRSKRNRALLTLLDNNPEIAN 657


>AT4G10840.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:6656614-6659033 FORWARD
           LENGTH=609
          Length = 609

 Score =  262 bits (669), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 128/213 (60%), Positives = 160/213 (75%), Gaps = 1/213 (0%)

Query: 1   MPGVNPEEIASGLTNVSAIYESMNXXXXXXXXXXXXXXIYNDSPGQQSSIAGIEAQMGVM 60
           +PG   EEIA GLT +SAIYES++              +  D PGQQS+IAG+EA+MGVM
Sbjct: 383 VPGTTVEEIAGGLTEISAIYESVDEPEEALKLLQKSMKLLEDKPGQQSAIAGLEARMGVM 442

Query: 61  YYMLGNYTESYNTLKNAITKLRAIGEKKSSFIGIALNQMGLACVQLYAFGEATELFEEAK 120
           YY +G Y ++ N  ++A+TKLRA GEK S+F G+ LNQMGLACVQL+   EA ELFEEA+
Sbjct: 443 YYTVGRYEDARNAFESAVTKLRAAGEK-SAFFGVVLNQMGLACVQLFKIDEAGELFEEAR 501

Query: 121 SILEHEYGPYHPETLGVYSNLAGTYDAIGRLDEAIQILEYVVSVREEKLGTANPDVDDEK 180
            ILE E GP   +TLGVYSNLA TYDA+GR+++AI+ILE V+ +REEKLGTANPD +DEK
Sbjct: 502 GILEQERGPCDQDTLGVYSNLAATYDAMGRIEDAIEILEQVLKLREEKLGTANPDFEDEK 561

Query: 181 RRLSELLKEAGRVRSRKVMSLENLLDANARIPN 213
           +RL+ELLKEAGR R+ K  SL+NL+D NAR P 
Sbjct: 562 KRLAELLKEAGRSRNYKAKSLQNLIDPNARPPK 594


>AT4G10840.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:6656614-6658702 FORWARD
           LENGTH=531
          Length = 531

 Score =  177 bits (450), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 87/150 (58%), Positives = 107/150 (71%), Gaps = 1/150 (0%)

Query: 1   MPGVNPEEIASGLTNVSAIYESMNXXXXXXXXXXXXXXIYNDSPGQQSSIAGIEAQMGVM 60
           +PG   EEIA GLT +SAIYES++              +  D PGQQS+IAG+EA+MGVM
Sbjct: 383 VPGTTVEEIAGGLTEISAIYESVDEPEEALKLLQKSMKLLEDKPGQQSAIAGLEARMGVM 442

Query: 61  YYMLGNYTESYNTLKNAITKLRAIGEKKSSFIGIALNQMGLACVQLYAFGEATELFEEAK 120
           YY +G Y ++ N  ++A+TKLRA GE KS+F G+ LNQMGLACVQL+   EA ELFEEA+
Sbjct: 443 YYTVGRYEDARNAFESAVTKLRAAGE-KSAFFGVVLNQMGLACVQLFKIDEAGELFEEAR 501

Query: 121 SILEHEYGPYHPETLGVYSNLAGTYDAIGR 150
            ILE E GP   +TLGVYSNLA TYDA+GR
Sbjct: 502 GILEQERGPCDQDTLGVYSNLAATYDAMGR 531


>AT2G31240.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:13317570-13319518 REVERSE
           LENGTH=617
          Length = 617

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 1/196 (0%)

Query: 6   PEEIASGLTNVSAIYESMNXXXXXXXXXXXXXXIYNDSPGQQSSIAGIEAQMGVMYYMLG 65
           P E+A   + V+  YESMN              I    P +Q S   + A++G +    G
Sbjct: 410 PVEVAEAYSEVAMQYESMNEFETAISLLQKTLGILEKLPQEQHSEGSVSARIGWLLLFSG 469

Query: 66  NYTESYNTLKNAITKLRAIGEKKSSFIGIALNQMGLACVQLYAFGEATELFEEAKSILEH 125
             +++   L++A  +L+     K   +G   N +G A ++L     A ++F  AK I++ 
Sbjct: 470 RVSQAVPYLESAAERLKESFGAKHFGVGYVYNNLGAAYLELGRPQSAAQMFAVAKDIMDV 529

Query: 126 EYGPYHPETLGVYSNLAGTYDAIGRLDEAIQILEYVVSVREEKLGTANPDVDDEKRRLSE 185
             GP H +++    NL+  Y  +G    A++  + V++  +    +A  ++ + KR L +
Sbjct: 530 SLGPNHVDSIDACQNLSKAYAGMGNYSLAVEFQQRVINAWDNHGDSAKDEMKEAKRLLED 589

Query: 186 L-LKEAGRVRSRKVMS 200
           L LK  G V + K+++
Sbjct: 590 LRLKARGGVSTNKLLN 605