Miyakogusa Predicted Gene

Lj0g3v0117039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0117039.1 Non Chatacterized Hit- tr|I3S3D1|I3S3D1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.17,0,SIGMA
FACTOR SIGB REGULATION PROTEIN RSBQ,NULL; ALPHA/BETA HYDROLASE
FOLD-CONTAINING PROTEIN,NULL; a,CUFF.6892.1
         (219 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37470.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   357   2e-99
AT3G03990.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   256   1e-68
AT3G24420.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   177   5e-45

>AT4G37470.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr4:17617045-17618363 REVERSE LENGTH=270
          Length = 270

 Score =  357 bits (917), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 165/218 (75%), Positives = 199/218 (91%)

Query: 1   MGAGTTNPDYFDFDRYSTLQGYAYDLLAILEELQVRSCIFVGHSVSGMIGTIASISRPDL 60
           MGAGTTNPDYFDFDRYS L+GY++DL+AILE+L++ SCIFVGHSVS MIG +AS++RPDL
Sbjct: 52  MGAGTTNPDYFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNRPDL 111

Query: 61  FSKLIMVSASPRYLNDVDYFGGFEQEDLDQLLDAMAANYKAWCSGWAPMAIGGDMESVAV 120
           FSK++M+SASPRY+NDVDY GGFEQEDL+QL +A+ +NYKAWC G+AP+A+GGDM+S+AV
Sbjct: 112 FSKIVMISASPRYVNDVDYQGGFEQEDLNQLFEAIRSNYKAWCLGFAPLAVGGDMDSIAV 171

Query: 121 QEFSRTLFNMRPDIALSVLQTIFQSDMRQVLSLVTVPCHIIQSKKDLAVPVVVAEDLHQH 180
           QEFSRTLFNMRPDIALSV QTIFQSDMRQ+L  VTVPCHI+QS KDLAVPVVV+E LH +
Sbjct: 172 QEFSRTLFNMRPDIALSVGQTIFQSDMRQILPFVTVPCHILQSVKDLAVPVVVSEYLHAN 231

Query: 181 GGGESIVEVMSTEGHLPQLSSPDIVVPVLLRHICHDIA 218
            G ES+VEV+ ++GHLPQLSSPD V+PV+LRHI +DIA
Sbjct: 232 LGCESVVEVIPSDGHLPQLSSPDSVIPVILRHIRNDIA 269


>AT3G03990.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:1033788-1034591 FORWARD LENGTH=267
          Length = 267

 Score =  256 bits (653), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 121/209 (57%), Positives = 160/209 (76%), Gaps = 1/209 (0%)

Query: 3   AGTTNPDYFDFDRYSTLQGYAYDLLAILEELQVRSCIFVGHSVSGMIGTIASISRPDLFS 62
           AG+ NPDYFDF+RY+TL  Y  DLL I++ L +++C +VGHSVS MIG IASI RP+LFS
Sbjct: 56  AGSVNPDYFDFNRYTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFS 115

Query: 63  KLIMVSASPRYLNDVDYFGGFEQEDLDQLLDAMAANYKAWCSGWAPMAIGGDMESVAVQE 122
           KLI++  SPR+LND DY GGFE+ +++++  AM ANY+AW  G+AP+A+G D+ + AV+E
Sbjct: 116 KLILIGFSPRFLNDEDYHGGFEEGEIEKVFSAMEANYEAWVHGFAPLAVGADVPA-AVRE 174

Query: 123 FSRTLFNMRPDIALSVLQTIFQSDMRQVLSLVTVPCHIIQSKKDLAVPVVVAEDLHQHGG 182
           FSRTLFNMRPDI+L V +T+F SD+R VL LV VP  +IQ+ KD++VP  VAE L  H G
Sbjct: 175 FSRTLFNMRPDISLFVSRTVFNSDLRGVLGLVRVPTCVIQTAKDVSVPASVAEYLRSHLG 234

Query: 183 GESIVEVMSTEGHLPQLSSPDIVVPVLLR 211
           G++ VE + TEGHLPQLS+P  +   L R
Sbjct: 235 GDTTVETLKTEGHLPQLSAPAQLAQFLRR 263


>AT3G24420.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:8863111-8864883 REVERSE LENGTH=273
          Length = 273

 Score =  177 bits (449), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 81/192 (42%), Positives = 134/192 (69%), Gaps = 2/192 (1%)

Query: 11  FDFDRYSTLQGYAYDLLAILEELQVRSCIFVGHSVSGMIGTIASISRPDLFSKLIMVSAS 70
           +D  +Y++L  ++ DL+A++EEL+    +FVGHS+SG+IG  ASI RPDLF+ L++++AS
Sbjct: 69  YDPSKYNSLDVFSDDLIALMEELKFGPVVFVGHSMSGVIGCAASIKRPDLFTNLLLIAAS 128

Query: 71  PRYLNDVDYFGGFEQEDLDQLLDAMAANYKAWCSGWAPMAIGGDMESVAVQEFSRTLFNM 130
           PRY+N  DY GGFE +D+D ++ ++ +NY+AW   ++   +    +S++VQ F ++L  M
Sbjct: 129 PRYINSEDYKGGFESKDIDTIITSIGSNYEAWAVDFSSFVVDS-RDSLSVQRFEKSLKKM 187

Query: 131 RPDIALSVLQTIFQSDMRQVLSLVTVPCHIIQSKKDLAVPVVVAEDLHQHGGGESIVEVM 190
           +P+ AL++ + +F SD R++L  V+VPCH+IQ   D+ VPV VA  + +   G+S VE++
Sbjct: 188 KPETALALAKIVFGSDEREILGQVSVPCHVIQPGNDVVVPVSVAYFMQEKIKGKSTVEII 247

Query: 191 STE-GHLPQLSS 201
               GH PQ++S
Sbjct: 248 EDAIGHFPQMTS 259