Miyakogusa Predicted Gene

Lj0g3v0116309.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0116309.1 Non Chatacterized Hit- tr|Q9M3Z6|Q9M3Z6_CICAR
Putative Ruv DNA-helicase OS=Cicer arietinum PE=2
SV=1,97.65,0,SUBFAMILY NOT NAMED,NULL; RUVB-RELATED REPTIN AND
PONTIN,NULL; TIP49,TIP49, C-terminal; no descripti,CUFF.6829.1
         (214 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22330.1 | Symbols: ATTIP49A, RIN1 | P-loop containing nucleo...   386   e-108
AT3G49830.1 | Symbols:  | P-loop containing nucleoside triphosph...   162   2e-40
AT5G67630.1 | Symbols:  | P-loop containing nucleoside triphosph...   149   1e-36

>AT5G22330.1 | Symbols: ATTIP49A, RIN1 | P-loop containing
           nucleoside triphosphate hydrolases superfamily protein |
           chr5:7391026-7394071 REVERSE LENGTH=458
          Length = 458

 Score =  386 bits (991), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/214 (88%), Positives = 202/214 (94%)

Query: 1   MEKMRIEEVQSTTKKQRVATHTHIKGLGLEASGKALPFASGFVGQAEAREACGLVVDMIR 60
           MEK++IEE+QST KKQR+ATHTHIKGLGLE +G  +  A+GFVGQ EAREA GLVVDMI+
Sbjct: 1   MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIKLAAGFVGQLEAREAAGLVVDMIK 60

Query: 61  QKKMAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFR 120
           QKKMAG+ALLLAGPPGTGKTALALGI QELG+KVPFCPMVGSEVYSSEVKKTEVLMENFR
Sbjct: 61  QKKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR 120

Query: 121 RAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY 180
           RAIGLRIKE KEVYEGEVTELSPEETES+TGGYGKSISHV+I LKTVKGTK LKLDPTIY
Sbjct: 121 RAIGLRIKETKEVYEGEVTELSPEETESLTGGYGKSISHVVITLKTVKGTKHLKLDPTIY 180

Query: 181 DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFAT 214
           DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFAT
Sbjct: 181 DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFAT 214


>AT3G49830.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr3:18482383-18483940
           FORWARD LENGTH=473
          Length = 473

 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 132/209 (63%), Gaps = 3/209 (1%)

Query: 1   MEKMRIEEVQSTTKKQRVATHTHIKGLGLEASGKALPFASGFVGQAEAREACGLVVDMIR 60
           M ++R+ E +  T+ +R+  H+HI+GLGL++  +    + G VGQ +AR+A G+ +++IR
Sbjct: 1   MAELRLSETRDLTRIERIGAHSHIRGLGLDSVLEPRAVSEGMVGQIKARKAAGVTLELIR 60

Query: 61  QKKMAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFR 120
             K++GRA+L+AG PGTGK A+A+GI + LG + PF  + GSE++S E+ KTE L + FR
Sbjct: 61  DGKISGRAILIAGQPGTGKIAIAMGIAKSLGQETPFTMIAGSEIFSLEMSKTEALTQAFR 120

Query: 121 RAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY 180
           +AIG+RIKE  +V EGEV  +S +   S  G   K+     I +KT        L   + 
Sbjct: 121 KAIGVRIKEETDVIEGEVVTISIDRPASSGGSVKKTGK---ITMKTTDMESNFDLGWKLI 177

Query: 181 DALIKEKVAVGDVIYIEANSGAVKRVGRS 209
           + L KEKV  GDVI ++   G + ++GRS
Sbjct: 178 EPLDKEKVQSGDVIVLDRFCGKITKLGRS 206


>AT5G67630.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:26967535-26969306
           REVERSE LENGTH=469
          Length = 469

 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 141/216 (65%), Gaps = 18/216 (8%)

Query: 1   MEKMRIEEVQSTTKKQRVATHTHIKGLGLEASGKALPFASGFVGQAEAREACGLVVDMIR 60
           M ++++ E +  T+ +R+  H+HI+GLGL+++ +    + G VGQ +AR+A G+++ MIR
Sbjct: 1   MAELKLSESRDLTRVERIGAHSHIRGLGLDSALEPRAVSEGMVGQVKARKAAGVILQMIR 60

Query: 61  QKKMAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFR 120
           + K+AGRA+L+AG PGTGKTA+A+G+ + LG + PF  + GSE++S E+ KTE L ++FR
Sbjct: 61  EGKIAGRAILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSLEMSKTEALTQSFR 120

Query: 121 RAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY 180
           +AIG+RIKE  EV EGEV E+  +   S +G   KS      G  T+K T       T+Y
Sbjct: 121 KAIGVRIKEETEVIEGEVVEVQIDRPAS-SGVASKS------GKMTMKTTDM----ETVY 169

Query: 181 D-------ALIKEKVAVGDVIYIEANSGAVKRVGRS 209
           D       AL KEKV  GDVI I+  +G + ++GRS
Sbjct: 170 DMGAKMIEALNKEKVQSGDVIAIDKATGKITKLGRS 205