Miyakogusa Predicted Gene

Lj0g3v0115009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0115009.1 Non Chatacterized Hit- tr|K3YJ79|K3YJ79_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014298,33.93,1e-18,Thioredoxin-like,Thioredoxin-like fold;
Thioredoxin,Thioredoxin domain; no
description,Thioredoxin-l,CUFF.6718.1
         (224 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G03860.1 | Symbols: ATAPRL5, APRL5 | APR-like 5 | chr3:992465...   218   2e-57
AT5G18120.1 | Symbols: ATAPRL7, APRL7 | APR-like 7 | chr5:599138...   213   9e-56
AT1G34780.1 | Symbols: ATAPRL4, APRL4 | APR-like 4 | chr1:127488...   108   3e-24
AT4G08930.1 | Symbols: ATAPRL6, APRL6 | APR-like 6 | chr4:572951...    84   9e-17
AT1G34780.2 | Symbols: ATAPRL4, APRL4 | APR-like 4 | chr1:127488...    78   5e-15

>AT3G03860.1 | Symbols: ATAPRL5, APRL5 | APR-like 5 |
           chr3:992465-994315 FORWARD LENGTH=300
          Length = 300

 Score =  218 bits (556), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 111/221 (50%), Positives = 155/221 (70%), Gaps = 4/221 (1%)

Query: 1   MLFYASWCPFSQRMLSKFESLSSMFPQIEHLVLEQSSAWPSLYSKYGIHSLPAILLVNQT 60
           +LFYASWCPFS+ +  KF+ LSSMFPQI+HL +E S A PS++S+YGIHSLP+IL+VNQT
Sbjct: 79  VLFYASWCPFSRAVRPKFDMLSSMFPQIQHLAVEHSQALPSVFSRYGIHSLPSILMVNQT 138

Query: 61  SRLRYHGPKYLLSLLEFYERNTRFEASNNVIVS--SMMSDEKLNMKSLL--GLSLKEISS 116
              RYHG K L+SL+EFYE  T  +    V     + ++    N+ + L  G S++EI  
Sbjct: 139 LNARYHGRKDLISLIEFYEEATGLQPVQYVAEGEPTGLNAGDGNLITWLRKGTSIREIFK 198

Query: 117 REPYLVCSILFLCLRILLFVFPKIVLRLRAFWVFCIPHLNMQIFGETSQVMGRVLQVIDV 176
           ++P+LV S+LF+CL++ + VFP    R+RA W   + +LN+  FGE SQ+  R + ++DV
Sbjct: 199 QDPFLVLSLLFICLQMAILVFPIAESRMRALWASYVANLNLGRFGEISQLFNRGIHMVDV 258

Query: 177 RRVWNKLRLCKTRIFHVRVRSARVWASSLASVSLGESPSAR 217
           RR+W KL L KTR FH R ++A+ WASSLASVSLG++ S +
Sbjct: 259 RRLWLKLSLVKTRNFHERAKNAQAWASSLASVSLGQTSSDQ 299


>AT5G18120.1 | Symbols: ATAPRL7, APRL7 | APR-like 7 |
           chr5:5991385-5993696 FORWARD LENGTH=289
          Length = 289

 Score =  213 bits (542), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 109/218 (50%), Positives = 151/218 (69%), Gaps = 9/218 (4%)

Query: 1   MLFYASWCPFSQRMLSKFESLSSMFPQIEHLVLEQSSAWPSLYSKYGIHSLPAILLVNQT 60
           +LFY S CPFS+ +  KF+ LSSMFP I HL++EQS A PS++S+YGIHSLP+IL+VNQT
Sbjct: 75  ILFYTSRCPFSRAVRPKFDVLSSMFPHITHLIVEQSQALPSVFSRYGIHSLPSILMVNQT 134

Query: 61  SRLRYHGPKYLLSLLEFYERNTRFEASNNVIVSSMMS-DEKLNMKSLL--GLSLKEISSR 117
            ++RYHGPK L SL++FY+  T  +    +      S D   N+ + L  G S++EI+ R
Sbjct: 135 MKMRYHGPKDLASLIQFYKETTGLKPVQYMDEGEPTSLDTDGNLITWLHNGSSIREIAER 194

Query: 118 EPYLVCSILFLCLRILLFVFPKIVLRLRAFWVFCIPHLNMQIFGETSQVMGRVLQVIDVR 177
           EPY+V +++FL L++ + +FP +  RL+  W   +PHL++ I GETSQ+ GR L +IDVR
Sbjct: 195 EPYMVLALMFLSLKLAILIFPIMGSRLKTLWALYVPHLSLGILGETSQLFGRALHMIDVR 254

Query: 178 RVWNKLRLCKTRIFHVRVRSARVWASSLASVSLGESPS 215
           R+W KLRL KTR F  R ++A      LASVSLG+S S
Sbjct: 255 RLWIKLRLTKTRNFQERAKNA------LASVSLGKSSS 286


>AT1G34780.1 | Symbols: ATAPRL4, APRL4 | APR-like 4 |
           chr1:12748835-12750124 REVERSE LENGTH=310
          Length = 310

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 116/225 (51%), Gaps = 25/225 (11%)

Query: 1   MLFYASWCPFSQRMLSKFESLSSMFPQIEHLVLEQSSAWPSLYSKYGIHSLPAILLVNQT 60
           +LFYASWCPFS+     F+ +SS++  I H  +++SS  PS  SKYG+H  P +LL+N T
Sbjct: 86  LLFYASWCPFSRSFRPSFDVISSLYSSIPHFAIKESSIKPSTLSKYGVHGFPTLLLLNST 145

Query: 61  SRLRYHGPKYLLSLLEFYERNTRFEASNNVIVSSMMS---------DEKLNMKSLLGLSL 111
            R RY G + L SL+ FY   T  E  +   +   +S          E  N       S 
Sbjct: 146 MRARYRGTRMLDSLVAFYSDVTGIETLDKTSLERSVSVPHLGNENNTEPENCPFTWARSP 205

Query: 112 KEISSREPYLVCSILFLCLRILLFVFPKIVLRLRAFWVFCIPHLNMQ-IFGETSQVMGRV 170
           + +  +E YL  +I+F+ LR+L  ++P +V+ ++  W     ++ ++ +   T   + R 
Sbjct: 206 ENMLRQETYLALAIVFVLLRLLHLIYPTLVVFMKFTWRRIAQNMRLESLLEHTVGFLSRA 265

Query: 171 LQVIDVRRVWNKLRLCKTRIFHVR--VRSARVWAS-SLASVSLGE 212
           +Q            LC  R  +++    +AR WAS SLA+VS+G+
Sbjct: 266 VQ------------LCMHRRSNLQGGAMNARAWASKSLATVSIGD 298


>AT4G08930.1 | Symbols: ATAPRL6, APRL6 | APR-like 6 |
           chr4:5729511-5730724 FORWARD LENGTH=295
          Length = 295

 Score = 83.6 bits (205), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 6/154 (3%)

Query: 1   MLFYASWCPFSQRMLSKFESLSSMFPQIEHLVLEQSSAWPSLYSKYGIHSLPAILLVNQT 60
           +LFYASWCPFS+ +   F+ +S ++  + H  +E+SS   S  SKYG+H  P I+L+N T
Sbjct: 79  LLFYASWCPFSRLVRPSFDLMSLLYSSVPHFAIEESSVKASTLSKYGVHGFPTIILMNST 138

Query: 61  SRLRYHGPKYLLSLLEFYERNTRFEASN------NVIVSSMMSDEKLNMKSLLGLSLKEI 114
             + Y G + L SL+ FY   T  E  +      N +V    ++ +         S + +
Sbjct: 139 MLVVYRGSRTLDSLVAFYTDVTGIETMDERWVERNRLVPHFHAEPENCPFPWARRSPENL 198

Query: 115 SSREPYLVCSILFLCLRILLFVFPKIVLRLRAFW 148
             +E YL  + +F+ LR+L  + P +V+ ++  W
Sbjct: 199 LRQETYLTLATVFVLLRLLHLISPTMVVFVKFTW 232


>AT1G34780.2 | Symbols: ATAPRL4, APRL4 | APR-like 4 |
           chr1:12748835-12750124 REVERSE LENGTH=281
          Length = 281

 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 54/225 (24%)

Query: 1   MLFYASWCPFSQRMLSKFESLSSMFPQIEHLVLEQSSAWPSLYSKYGIHSLPAILLVNQT 60
           +LFYASWCPFS                             S  SKYG+H  P +LL+N T
Sbjct: 86  LLFYASWCPFS-----------------------------STLSKYGVHGFPTLLLLNST 116

Query: 61  SRLRYHGPKYLLSLLEFYERNTRFEASNNVIVSSMMS---------DEKLNMKSLLGLSL 111
            R RY G + L SL+ FY   T  E  +   +   +S          E  N       S 
Sbjct: 117 MRARYRGTRMLDSLVAFYSDVTGIETLDKTSLERSVSVPHLGNENNTEPENCPFTWARSP 176

Query: 112 KEISSREPYLVCSILFLCLRILLFVFPKIVLRLRAFWVFCIPHLNMQ-IFGETSQVMGRV 170
           + +  +E YL  +I+F+ LR+L  ++P +V+ ++  W     ++ ++ +   T   + R 
Sbjct: 177 ENMLRQETYLALAIVFVLLRLLHLIYPTLVVFMKFTWRRIAQNMRLESLLEHTVGFLSRA 236

Query: 171 LQVIDVRRVWNKLRLCKTRIFHVR--VRSARVWAS-SLASVSLGE 212
           +Q            LC  R  +++    +AR WAS SLA+VS+G+
Sbjct: 237 VQ------------LCMHRRSNLQGGAMNARAWASKSLATVSIGD 269