Miyakogusa Predicted Gene

Lj0g3v0114229.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0114229.1 tr|I7L125|I7L125_HOMAM Gelsolin OS=Homarus
americanus GN=gsn PE=2 SV=1,43.68,0.000000001,Gelsolin,Gelsolin
domain; Actin depolymerizing proteins,NULL; Gelsolin homology
domain,Gelsolin; no ,gene.g8642.t1.1
         (100 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41740.1 | Symbols: VLN2, ATVLN2 | villin 2 | chr2:17410962-1...   181   1e-46
AT3G57410.1 | Symbols: VLN3, ATVLN3 | villin 3 | chr3:21243615-2...   175   5e-45
AT4G30160.1 | Symbols: VLN4, ATVLN4 | villin 4 | chr4:14754528-1...   149   3e-37
AT4G30160.2 | Symbols: VLN4 | villin 4 | chr4:14754528-14759511 ...   149   3e-37
AT5G57320.1 | Symbols: VLN5 | villin, putative | chr5:23212690-2...   146   3e-36
AT2G29890.2 | Symbols: VLN1, ATVLN1 | villin-like 1 | chr2:12744...    91   1e-19
AT2G29890.1 | Symbols: VLN1, ATVLN1 | villin-like 1 | chr2:12744...    91   1e-19
AT2G29890.3 | Symbols: VLN1 | villin-like 1 | chr2:12744597-1274...    91   1e-19

>AT2G41740.1 | Symbols: VLN2, ATVLN2 | villin 2 |
           chr2:17410962-17416878 REVERSE LENGTH=976
          Length = 976

 Score =  181 bits (458), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 83/100 (83%), Positives = 89/100 (89%)

Query: 1   MGDSYIILQTRQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQ 60
           MGD+YI+LQT Q KGG Y +D+HFWIGKDTSQDEAGTAA+K VELDA LGGRAVQHREIQ
Sbjct: 42  MGDTYIVLQTTQNKGGAYLFDIHFWIGKDTSQDEAGTAAVKTVELDAVLGGRAVQHREIQ 101

Query: 61  GHESDKFLSYFKPCIIPLEGGVASGFRKPEEEEFETHLYV 100
           GHESDKFLSYFKPCIIPLEGGVASGF+  EEE FET LY 
Sbjct: 102 GHESDKFLSYFKPCIIPLEGGVASGFKTVEEEVFETRLYT 141



 Score = 52.4 bits (124), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 2   GDSYIILQTRQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQG 61
           GD Y++L T         Y L  W GK +  ++  TA   A  +  +L GR VQ R  +G
Sbjct: 416 GDCYLVLYTYHSGERKDEYFLSCWFGKKSIPEDQDTAIRLANTMSNSLKGRPVQGRIYEG 475

Query: 62  HESDKFLSYFKPCIIPLEGGVASGFR 87
            E  +F++ F+P ++ L+GG++SG++
Sbjct: 476 KEPPQFVALFQPMVV-LKGGLSSGYK 500


>AT3G57410.1 | Symbols: VLN3, ATVLN3 | villin 3 |
           chr3:21243615-21249809 REVERSE LENGTH=965
          Length = 965

 Score =  175 bits (444), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 86/100 (86%), Positives = 93/100 (93%)

Query: 1   MGDSYIILQTRQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQ 60
           MGD+YI+LQT Q KGG Y +D+HFWIGKDTSQDEAGTAA+K VELDAALGGRAVQ+REIQ
Sbjct: 44  MGDTYIVLQTTQNKGGAYLFDIHFWIGKDTSQDEAGTAAVKTVELDAALGGRAVQYREIQ 103

Query: 61  GHESDKFLSYFKPCIIPLEGGVASGFRKPEEEEFETHLYV 100
           GHESDKFLSYFKPCIIPLEGGVASGF+KPEEEEFET LY 
Sbjct: 104 GHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYT 143



 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 2   GDSYIILQTRQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQG 61
           GD Y++L T         Y L  W GK+++Q++  TA   A  +  +L GR VQ R  +G
Sbjct: 418 GDCYLVLYTYHSGERKEDYFLCCWFGKNSNQEDQETAVRLASTMTNSLKGRPVQARIFEG 477

Query: 62  HESDKFLSYFKPCIIPLEGGVASGFRKPEEEE 93
            E  +F++ F+  ++ L+GG++SG++    E+
Sbjct: 478 KEPPQFVALFQHMVV-LKGGLSSGYKNSMTEK 508


>AT4G30160.1 | Symbols: VLN4, ATVLN4 | villin 4 |
           chr4:14754528-14759511 FORWARD LENGTH=974
          Length = 974

 Score =  149 bits (377), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/99 (70%), Positives = 83/99 (83%)

Query: 2   GDSYIILQTRQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQG 61
           GDSYI+L+T   K G   +D+H+W+GKDTSQDEAGTAA+K VELDAALGGRAVQ+RE+QG
Sbjct: 45  GDSYIVLKTTALKTGALRHDIHYWLGKDTSQDEAGTAAVKTVELDAALGGRAVQYREVQG 104

Query: 62  HESDKFLSYFKPCIIPLEGGVASGFRKPEEEEFETHLYV 100
           HE++KFLSYFKPCIIP EGGVASGF+    EE  T L+V
Sbjct: 105 HETEKFLSYFKPCIIPQEGGVASGFKHVVAEEHITRLFV 143


>AT4G30160.2 | Symbols: VLN4 | villin 4 | chr4:14754528-14759511
           FORWARD LENGTH=983
          Length = 983

 Score =  149 bits (377), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/99 (70%), Positives = 83/99 (83%)

Query: 2   GDSYIILQTRQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQG 61
           GDSYI+L+T   K G   +D+H+W+GKDTSQDEAGTAA+K VELDAALGGRAVQ+RE+QG
Sbjct: 45  GDSYIVLKTTALKTGALRHDIHYWLGKDTSQDEAGTAAVKTVELDAALGGRAVQYREVQG 104

Query: 62  HESDKFLSYFKPCIIPLEGGVASGFRKPEEEEFETHLYV 100
           HE++KFLSYFKPCIIP EGGVASGF+    EE  T L+V
Sbjct: 105 HETEKFLSYFKPCIIPQEGGVASGFKHVVAEEHITRLFV 143


>AT5G57320.1 | Symbols: VLN5 | villin, putative |
           chr5:23212690-23217549 FORWARD LENGTH=962
          Length = 962

 Score =  146 bits (369), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 82/99 (82%)

Query: 2   GDSYIILQTRQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQG 61
           GDSYI+L+T   + G+  +D+H+W+GKD+SQDEAG  A+  VELD+ALGGRAVQ+RE+QG
Sbjct: 45  GDSYIVLKTTASRSGSLHHDIHYWLGKDSSQDEAGAVAVMTVELDSALGGRAVQYREVQG 104

Query: 62  HESDKFLSYFKPCIIPLEGGVASGFRKPEEEEFETHLYV 100
           HE++KFLSYFKPCIIP EGGVASGF   + EE +T LY+
Sbjct: 105 HETEKFLSYFKPCIIPQEGGVASGFNHVKPEEHQTRLYI 143


>AT2G29890.2 | Symbols: VLN1, ATVLN1 | villin-like 1 |
           chr2:12744597-12749474 FORWARD LENGTH=911
          Length = 911

 Score = 91.3 bits (225), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/79 (51%), Positives = 62/79 (78%)

Query: 2   GDSYIILQTRQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQG 61
           G++Y++L+T   K  +  YD+H+W+G D ++ ++  A+ KA++LDAALG   VQ+RE+QG
Sbjct: 45  GNAYLVLRTFLRKIESPQYDIHYWLGIDANEVDSILASDKALDLDAALGCCTVQYREVQG 104

Query: 62  HESDKFLSYFKPCIIPLEG 80
            E++KFLSYFKPCIIP+EG
Sbjct: 105 QETEKFLSYFKPCIIPVEG 123


>AT2G29890.1 | Symbols: VLN1, ATVLN1 | villin-like 1 |
           chr2:12744597-12749474 FORWARD LENGTH=909
          Length = 909

 Score = 91.3 bits (225), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/79 (51%), Positives = 62/79 (78%)

Query: 2   GDSYIILQTRQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQG 61
           G++Y++L+T   K  +  YD+H+W+G D ++ ++  A+ KA++LDAALG   VQ+RE+QG
Sbjct: 45  GNAYLVLRTFLRKIESPQYDIHYWLGIDANEVDSILASDKALDLDAALGCCTVQYREVQG 104

Query: 62  HESDKFLSYFKPCIIPLEG 80
            E++KFLSYFKPCIIP+EG
Sbjct: 105 QETEKFLSYFKPCIIPVEG 123


>AT2G29890.3 | Symbols: VLN1 | villin-like 1 |
           chr2:12744597-12749474 FORWARD LENGTH=933
          Length = 933

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/79 (51%), Positives = 62/79 (78%)

Query: 2   GDSYIILQTRQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQG 61
           G++Y++L+T   K  +  YD+H+W+G D ++ ++  A+ KA++LDAALG   VQ+RE+QG
Sbjct: 45  GNAYLVLRTFLRKIESPQYDIHYWLGIDANEVDSILASDKALDLDAALGCCTVQYREVQG 104

Query: 62  HESDKFLSYFKPCIIPLEG 80
            E++KFLSYFKPCIIP+EG
Sbjct: 105 QETEKFLSYFKPCIIPVEG 123