Miyakogusa Predicted Gene
- Lj0g3v0113949.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0113949.1 tr|D7LQ58|D7LQ58_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,46.79,0.000000000000001,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
N,NODE_104170_length_495_cov_7.468687.path1.1
(109 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-18
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-13
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-13
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 70 3e-13
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-13
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 67 3e-12
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-12
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 65 9e-12
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 65 9e-12
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 65 1e-11
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 64 1e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-11
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-11
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 64 3e-11
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-11
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 64 3e-11
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-11
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-11
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 63 4e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-11
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-11
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-11
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 61 2e-10
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-10
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-10
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-10
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-10
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-10
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-10
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 7e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-09
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-09
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 57 2e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-09
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 57 4e-09
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-09
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-09
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 56 4e-09
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 56 6e-09
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-09
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-09
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 55 8e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-09
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-09
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 54 2e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-08
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 54 3e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-08
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 53 3e-08
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-08
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 53 4e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-08
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-08
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-08
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-08
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-08
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-07
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-07
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 51 1e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 51 1e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-07
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 50 3e-07
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 50 4e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-07
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 50 4e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 49 5e-07
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-07
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-07
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-07
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-07
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-07
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-06
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-06
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-06
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 2e-06
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 2e-06
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 47 2e-06
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 47 2e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 2e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 3e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 3e-06
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 3e-06
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 4e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 5e-06
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 46 5e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 6e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 45 7e-06
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 45 8e-06
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 87.0 bits (214), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 73/109 (66%), Gaps = 5/109 (4%)
Query: 3 NSVTIATLLTARDVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
NSVT+A++L G I Q+HC A K G +VYV TSLV+ Y R G V A ++F+
Sbjct: 131 NSVTVASVLGG--CGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFE 188
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN-EPNSVTLVS 109
++P ++VV+YNAF+SGL++NG LV VF ++MR F + EPN VT V+
Sbjct: 189 KVPHKSVVTYNAFISGLMENGVMNLVPSVF-NLMRKFSSEEPNDVTFVN 236
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLL-TARDVGPIHVPQV-HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T LL + +G + ++ H K G DV+ AT+LV+ Y++ + A KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
DE+P R + S NA +SGLL+NG R F +F D R + NSVT+ S
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGD-ARVSGSGMNSVTVAS 137
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 2 PNSVTIATLLTA-RDVGPIHVP--QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
P+S IA+L+TA G + QVH +K G+LSDVYV+T+++ Y +G++ + K
Sbjct: 56 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 115
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
VF+E+P RNVVS+ + M G G P V D++K M
Sbjct: 116 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM 151
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 2 PNSVTIATLLTA-RDVGPIHVP--QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
P+S IA+L+TA G + QVH +K G+LSDVYV+T+++ Y +G++ + K
Sbjct: 39 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 98
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
VF+E+P RNVVS+ + M G G P V D++K M
Sbjct: 99 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM 134
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++H ++ G S VY+ T+LV Y RFG + A VF +PVRNVVS++A ++ +NG
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNG 262
Query: 83 APRLVFDVFKDMMR-SFENEPNSVTLVS 109
F++MMR + ++ PNSVT+VS
Sbjct: 263 KAFEALRTFREMMRETKDSSPNSVTMVS 290
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PNSVT+ ++L A + + + +H + G+ S + V ++LVT Y R G L +V
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD + R+VVS+N+ +S +G + +F++M+ + + P VT VS
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS-PTPVTFVS 391
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 68.9 bits (167), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH +K LSDVY+ ++LV Y + G + A +VFDE+ RNVVS+N+ ++ QNG
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
DVF+ M+ S EP+ VTL S
Sbjct: 233 PAVEALDVFQMMLES-RVEPDEVTLAS 258
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 2 PNSVTIATLLTA-RDVGPIHVP-QVHCCASKLGVL------SDVYVATSLVTAYLRFGVL 53
P + A +L A D+ +H+ Q H K G D++V SL+ Y++ G +
Sbjct: 384 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443
Query: 54 VSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
VF ++ R+ VS+NA + G QNG ++F++M+ S E +P+ +T++
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHITMI 497
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 19 IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGL 78
I+V VH K G +++++ L+ AY + G L +VFD++P RN+ ++N+ ++GL
Sbjct: 37 IYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL 96
Query: 79 LQNGAPRLVFDVFKDM 94
+ G +F+ M
Sbjct: 97 TKLGFLDEADSLFRSM 112
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 1 MPNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+P++ +L+ D+G VHC + K G +DV+V +SLV Y + G +V A K+F
Sbjct: 119 LPSATKSCAILSRCDIGR----SVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMF 174
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN 100
DE+P RNVV+++ M G Q G +FK+ + FEN
Sbjct: 175 DEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL--FEN 212
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 65.5 bits (158), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++H KLG +SDVYV SL++ Y++ G A KVF+E+P R++VS+N+ +SG L G
Sbjct: 151 KIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALG 210
Query: 83 APRLVFDVFKDMMR 96
+FK+M++
Sbjct: 211 DGFSSLMLFKEMLK 224
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
P+ +T LL A + + +H A + G L + + T+L+ Y G L SA +FD
Sbjct: 332 PDVITSINLLPASAI--LEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFD 389
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+ +NV+S+N+ ++ +QNG ++F+++ S P+S T+ S
Sbjct: 390 RMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS-SLVPDSTTIAS 436
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 65.1 bits (157), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H + K GV SDV V +SL++ Y + G +VSA KVFDE+P RNV ++NA + G + NG
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGD 127
Query: 84 PRLVFDVFKDM 94
L +F+++
Sbjct: 128 AVLASGLFEEI 138
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 2 PNSVTIATLLTA------RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
P++VT++++L+A DVG +VH + G+ + +V+ +L+ Y + G L +
Sbjct: 272 PDAVTVSSILSACAQSGRLDVGR----EVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
A VF+ + VR+V N+ +S L +G + ++F M S + +P+ +T ++
Sbjct: 328 ATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFS-TMESLDLKPDEITFIA 380
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 65.1 bits (157), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH K G+ V+VA+SL Y + GVL A KVFDE+P RN V++NA M G +QNG
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGK 254
Query: 84 PRLVFDVFKDMMRSFENEPNSVTL 107
+F D MR EP VT+
Sbjct: 255 NEEAIRLFSD-MRKQGVEPTRVTV 277
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 65.1 bits (157), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K+G D++V SLV Y G L SA KVFDE+ RNVVS+ + + G +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
+ D+F M+R E PNSVT+V
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMV 240
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 65.1 bits (157), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 49/86 (56%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K+G D++V SLV Y G L SA KVFDE+ RNVVS+ + + G +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
+ D+F M+R E PNSVT+V
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMV 240
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 25 HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAP 84
HC A K G +SDVY+ +SLV Y G + +A KVF+E+P RNVVS+ A +SG Q
Sbjct: 143 HCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRV 202
Query: 85 RLVFDVFKDMMRSFENEPNSVTLVS 109
+ ++ M +S ++PN T +
Sbjct: 203 DICLKLYSKMRKS-TSDPNDYTFTA 226
Score = 58.5 bits (140), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 2 PNSVTIATLLTARDVGPIHVPQ---VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
PN T LL+A G + Q VHC +G+ S ++++ SL++ Y + G L A +
Sbjct: 219 PNDYTFTALLSAC-TGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVT 106
+FD+ ++VVS+N+ ++G Q+G ++F+ MM +P+++T
Sbjct: 278 IFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAIT 325
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVHC K G DVYV L+ Y G L A KVFDE+P R++VS+N+ + L++ G
Sbjct: 172 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 231
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F++M RSF EP+ T+ S
Sbjct: 232 EYDSALQLFREMQRSF--EPDGYTMQS 256
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 52/81 (64%)
Query: 29 SKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVF 88
++LG ++ ++++ Y R G + SA ++FD +P RNVVS+N+ ++G NG L
Sbjct: 323 NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAI 382
Query: 89 DVFKDMMRSFENEPNSVTLVS 109
+ F+DM+ +++P+ VT++S
Sbjct: 383 EFFEDMIDYGDSKPDEVTMIS 403
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 35 SDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
+DV T ++T + + L +A K FD +P ++VVS+NA +SG QNG +F DM
Sbjct: 196 NDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
Query: 95 MRSFENEPNSVTLV 108
+R PN T V
Sbjct: 256 LR-LGVRPNETTWV 268
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
Query: 2 PNSVTIATLLTARD------VGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
P+S++I+ +L A +G + QVH + G SDV+V ++T Y + + S
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSL-ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIES 185
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
A KVFDE+ R+VVS+N+ +SG Q+G+ ++K M+ + +PN VT++S
Sbjct: 186 ARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVIS 239
Score = 52.4 bits (124), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTARDVGP--IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN+VT+++LL + ++H A + G +++YV TS++ Y + G L+ A +V
Sbjct: 364 PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRV 423
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD R+++++ A ++ +G +F D M+ +P+ VTL +
Sbjct: 424 FDNCKDRSLIAWTAIITAYAVHGDSDSACSLF-DQMQCLGTKPDDVTLTA 472
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 8/109 (7%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
P+ T ++L A R V I ++HC A K G + DVYVA SL+ Y R+ + +A +F
Sbjct: 151 PDYRTFPSVLKACRTV--IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
DE+PVR++ S+NA +SG Q+G + + +R+ + SVT+VS
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEAL-TLSNGLRAMD----SVTVVS 252
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 3 NSVTIATLLTA-RDVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+SVT+ +LL+A + G + +H + K G+ S+++V+ L+ Y FG L KVF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
D + VR+++S+N+ + N P +F++ MR +P+ +TL+S
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQE-MRLSRIQPDCLTLIS 353
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 34 LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKD 93
L D+ + ++V Y + G++ SA VF+ LP +V+S+N +SG QNG +++
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 94 MMRSFENEPNSVTLVS 109
M E N T VS
Sbjct: 441 MEEEGEIAANQGTWVS 456
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ VTI ++L A D G + + + HC + + V V T+++ Y + G + A ++
Sbjct: 272 PDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRI 331
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FDE+P + V S+NA + G NG R D+F MM E +P+ +T+++
Sbjct: 332 FDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM--IEEKPDEITMLA 379
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H + G +D+YV+T +V Y +FG + A FDE+P R+ VS+ A +SG ++ G
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCG 158
Query: 83 APRLVFDVFKDM 94
L +F M
Sbjct: 159 ELDLASKLFDQM 170
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 41 TSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN 100
T+++ Y + +A K+FD +P RN+VS+N + G QN P+ +F++M +
Sbjct: 211 TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSL 270
Query: 101 EPNSVTLVS 109
+P+ VT++S
Sbjct: 271 DPDDVTILS 279
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 1 MPNSVTIATLLTARDVGPIHVP----QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSA 56
+PN T A V + +P Q+H A K G + DV+V S Y + + A
Sbjct: 105 VPNDFTFPCAFKA--VASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 57 GKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
K+FDE+P RN+ ++NAF+S + +G PR + F + R + PNS+T +
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE-FRRIDGHPNSITFCA 214
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H A K V ++V ++LV Y + G + + + FDE+P +N+V+ N+ + G G
Sbjct: 332 IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQ 391
Query: 84 PRLVFDVFKDMM-RSFENEPNSVTLVS 109
+ +F++M R PN +T VS
Sbjct: 392 VDMALALFEEMAPRGCGPTPNYMTFVS 418
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 63.2 bits (152), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++H +++G+ SDVY+ T+LV Y + LVSA +VFD++ V++VV++N +SGL QNG
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 83 APRLVFDVFKDM 94
+F DM
Sbjct: 181 CSSAALLLFHDM 192
Score = 58.9 bits (141), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 2 PNSVTIATLL------TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
PN+VT+ ++L A +G +HC A K + S++ AT++++ Y + G
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGK----SIHCYAIKADIESELETATAVISMYAKCGRFSP 454
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
A K F+ LP+++ V++NA G Q G FDV+K+M
Sbjct: 455 ALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H A + G++ DV VATSL++ Y + G L A ++F + R+VVS++A ++ Q G
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
+F+DMMR +PN+VTL S
Sbjct: 382 HDEAISLFRDMMR-IHIKPNAVTLTS 406
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLL-TARDVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN+VT ++ A ++ + V VH + G S V SLV Y + G++ S+ K
Sbjct: 602 PNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKC 661
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F E+ + +VS+N +S +G +F M + E +P+SV+ +S
Sbjct: 662 FIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQEN-ELKPDSVSFLS 710
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 63.2 bits (152), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ--- 80
+HC +KLG+ D+ V T+L+ Y + G L A K+F +P +NVV+YNA +SG LQ
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 81 --NGAPRLVFDVFKDMM-RSFENEPNSVTLV 108
+ A F +F DM R E P++ ++V
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVV 364
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 63.2 bits (152), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLL-TARDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T L+ A +V + + Q +H A K V SDV+VA SL+ Y G L SA KV
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F + ++VVS+N+ ++G +Q G+P ++FK M S + + + VT+V
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK-MESEDVKASHVTMV 236
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLL-TARDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P++ T +++ + D+ + + + VHC A G D YV +LVT Y + G + A +V
Sbjct: 105 PSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV 164
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD +P +++V++N+ +SG QNG VF MR EP+S T VS
Sbjct: 165 FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ-MRESGFEPDSATFVS 213
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 62.8 bits (151), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 13 ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYN 72
AR + + Q+HC ++ G+ +D + T+L+ AY + G L+SA K+FDE+PVR+V S+N
Sbjct: 120 ARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWN 179
Query: 73 AFMSGLLQNGAPRLVFDVFKDM 94
A ++GL+ +++K M
Sbjct: 180 ALIAGLVSGNRASEAMELYKRM 201
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
MP +++L+A + + + + Q+H KLG SD YV +LV+ Y G L+SA
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+F + R+ V+YN ++GL Q G ++FK M EP+S TL S
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLAS 394
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 35/144 (24%)
Query: 1 MPNSVTIATLLT--ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PNS T +L A+ Q+H KLG D+YV TSL++ Y++ G L A K
Sbjct: 131 LPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHK 190
Query: 59 VFD-------------------------------ELPVRNVVSYNAFMSGLLQNGAPRLV 87
VFD E+PV++VVS+NA +SG + G +
Sbjct: 191 VFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 250
Query: 88 FDVFKDMMRS--FENEPNSVTLVS 109
++FKDMM++ +E VT+VS
Sbjct: 251 LELFKDMMKTNVRPDESTMVTVVS 274
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T+ T+++A G I + QVH G S++ + +L+ Y + G L +A +
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+ LP ++V+S+N + G + +F++M+RS E PN VT++S
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLS 372
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKL--GVLSDVYVATSLVTAYLRFGVLVSAG 57
PN VT+ ++L A +G I + + +H K GV + + TSL+ Y + G + +A
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 424
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
+VF+ + +++ S+NA + G +G FD+F MR +P+ +T V
Sbjct: 425 QVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS-RMRKIGIQPDDITFV 474
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K G + DV VA+SLV Y +F + ++ +VFDE+P R+V S+N +S Q+G
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 84 PRLVFDVFKDMMRSFENEPNSVTL 107
++F M S EPNSV+L
Sbjct: 189 AEKALELF-GRMESSGFEPNSVSL 211
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 20 HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLL 79
H QVH + DVYVA+ L+T Y++ G LV + +FD P ++++ +N+ +SG
Sbjct: 349 HGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYA 408
Query: 80 QNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+G VF +M S +PN VT V+
Sbjct: 409 SHGLGEEALKVFCEMPLSGSTKPNEVTFVA 438
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 25 HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAP 84
HC A K G +SD+YV+ ++ +Y++FG L A +FDE+P R+ VS+N +SG G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 85 RLVFDVFKDMMRS 97
+ +F M RS
Sbjct: 83 EDAWCLFTCMKRS 95
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 8 ATLLTARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVR 66
A L + D+ + + Q+H A+K G +S+ +V +SL+ Y + G++ SA K F ++ +
Sbjct: 413 ALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK 472
Query: 67 -NVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
+ V++NA + G Q+G ++ D+F M
Sbjct: 473 HSTVAWNAMILGYAQHGLGQVSLDLFSQM 501
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 5 VTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELP 64
VT A LT DV + Q+ C K G+L+D++V + LV+A+ + G L A KVF+++
Sbjct: 213 VTTACSLTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 65 VRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
RN V+ N M GL++ +F DM + P S ++
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL 314
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DVY+ +L+ AYL G VSA KVFDE+P+RN VS+ +SG +NG + +DM+
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 96 RS--FENE 101
+ F N+
Sbjct: 95 KEGIFSNQ 102
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 48/86 (55%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+VH C+ + + SDV V ++LV Y + G L A + F+ +PVRN S+N+ +SG ++G
Sbjct: 640 EVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHG 699
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
+F+ M + P+ VT V
Sbjct: 700 QGEEALKLFETMKLDGQTPPDHVTFV 725
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 49/85 (57%)
Query: 25 HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAP 84
H + G +S+V+V +LV Y R L A KVFDE+ V +VVS+N+ + + G P
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 85 RLVFDVFKDMMRSFENEPNSVTLVS 109
++ ++F M F P+++TLV+
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVN 234
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+HC A ++ +++V LV Y + G++ A VF + V++VVS+NA ++G Q G
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 83 APRLVFDVFKDMMRSFE 99
F+D +R FE
Sbjct: 310 R-------FEDAVRLFE 319
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 60.5 bits (145), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 1 MPNSVTIATL------LTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLV 54
+P+ TIATL LTA + G Q+H A KL +D +V TSLV Y + G +
Sbjct: 615 LPDEFTIATLAKASSCLTALEQGR----QIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 55 SAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
A +F + + N+ ++NA + GL Q+G + +FK M+S +P+ VT +
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ-MKSLGIKPDKVTFI 723
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 25 HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAP 84
H A K+G+ D +VA +LV YL+FG + +F+E+P R+VV +N + L+ G
Sbjct: 168 HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFK 227
Query: 85 RLVFDVFKDMMRSFENEPNSVTL 107
D+ S N PN +TL
Sbjct: 228 EEAIDLSSAFHSSGLN-PNEITL 249
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVHC A KLG+ + V+ SL+ Y + A VFD + R+++S+N+ ++G+ QNG
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F ++R +P+ T+ S
Sbjct: 396 LEVEAVCLFMQLLRC-GLKPDQYTMTS 421
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH A K G D++V++ ++ Y++ G + +A FD +PV + V++ +SG ++NG
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 83 APRLVFDVFKDM 94
F VF M
Sbjct: 598 EEERAFHVFSQM 609
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 51/75 (68%)
Query: 35 SDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
SD+YV +SL+ Y++ G ++ A ++FDEL ++V++++ +SG +NG+P + F+ M
Sbjct: 94 SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRM 153
Query: 95 MRSFENEPNSVTLVS 109
+ + + P+ VTL++
Sbjct: 154 VMASDVTPDRVTLIT 168
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 25 HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAP 84
H K G S+ ++ SLV Y R G L +A KVF+ + +++ V + + ++G +G
Sbjct: 389 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 448
Query: 85 RLVFDVFKDMMRSFENEPNSVTLVS 109
+ F M++S E +PN VT +S
Sbjct: 449 TKALETFNHMVKSSEVKPNEVTFLS 473
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+HC K G L DV V TSLV Y++ KVFDE+ RNVV++ +SG +N
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
V +F M +PNS T +
Sbjct: 174 MNDEVLTLFMRMQNE-GTQPNSFTFAA 199
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELP-VRNVVSYNAFMSGLLQN 81
Q+HC K G L D + T+L+ AY + ++ A ++F E+ V NVVS+ A +SG LQN
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 82 GAPRLVFDVFKDMMRSFENEPNSVT 106
D+F +M R PN T
Sbjct: 376 DGKEEAVDLFSEMKRK-GVRPNEFT 399
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 2 PNSVTIATLLT---ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
PN T +++L A + Q H A K + S + V+++L+T Y + G + SA +
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
VF +++VS+N+ +SG Q+G DVFK+M +
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK 589
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
PN T + +LTA V I +VH K V T+L+ AY++ G + A KVF
Sbjct: 395 PNEFTYSVILTALPV--ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+ +++V+++A ++G Q G +F ++ + +PN T S
Sbjct: 453 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG-GIKPNEFTFSS 499
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 2 PNSVTIAT---LLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
PNS T A +L VG + QVH K G+ + V+ SL+ YL+ G + A
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGL-QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARI 250
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSF 98
+FD+ V++VV++N+ +SG NG +F M ++
Sbjct: 251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 1 MPNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+P ++ + L A + G +HC + K G V SLV Y + G L A KVF
Sbjct: 531 LPGFISASANLGALETGK----HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVF 586
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
+E+ +VVS+N +SGL NG F++ MR E EP+SVT +
Sbjct: 587 EEIATPDVVSWNGLVSGLASNGFISSALSAFEE-MRMKETEPDSVTFL 633
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++H A +LG + D + + +T Y + G +A KVFDE P R + S+NA + GL G
Sbjct: 138 ELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAG 197
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
++F DM RS EP+ T+VS
Sbjct: 198 RANEAVEMFVDMKRS-GLEPDDFTMVS 223
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 23 QVHCC--ASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ 80
Q+H C +K SD+ + SL+ Y + G + A +F+E+ RNVVS+++ + G
Sbjct: 239 QLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAA 298
Query: 81 NGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
NG + F+ MR F PN +T V
Sbjct: 299 NGNTLEALECFRQ-MREFGVRPNKITFVG 326
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 2 PNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN +T LL A +G Q+ K G DVYV +L+ Y A KV
Sbjct: 111 PNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKV 170
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM--RSFENEPNSVTLVS 109
FDE+ RNVVS+N+ M+ L++NG LVF+ F +M+ R +E V L+S
Sbjct: 171 FDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLS 222
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 2 PNSVTIATLLTARDVGPI--HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT A+LLTA + H Q HC + + + SL+ Y + G L A ++
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRL 311
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD +P R +S+NA + G ++G R V ++F+ M +P++VTL++
Sbjct: 312 FDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361
Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+VH K L Y+ T L+ Y + L A KV DE+P +NVVS+ A +S Q G
Sbjct: 73 RVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTG 132
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
VF +MMRS + +PN T +
Sbjct: 133 HSSEALTVFAEMMRS-DGKPNEFTFAT 158
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T AT+LT+ R G Q+H K S ++V +SL+ Y + G + A ++
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI 210
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+ LP R+VVS A ++G Q G ++F + S PN VT S
Sbjct: 211 FECLPERDVVSCTAIIAGYAQLGLDEEALEMFH-RLHSEGMSPNYVTYAS 259
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 58.9 bits (141), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PNS T +++L TA I Q+H K+ +++D+ V SLV+ Y + G A K+
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F + N+VSYN +SG NG + +F M+ S EPN VT ++
Sbjct: 496 FSCISEPNIVSYNTMISGYSYNGFGKKALKLFS-MLESSGKEPNGVTFLA 544
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 2 PNSVTIATL------LTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
PN T A++ LT+ +VG QVH K GV + + + +SL+ Y + G +
Sbjct: 271 PNISTFASVIGACSVLTSHEVGQ----QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIND 326
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
A +VFD++ +NV S+ + + G +NG P ++F M+ F EPN VT +
Sbjct: 327 ARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFT-RMKEFRIEPNYVTFL 378
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H +K+G D+YV SLV Y G +A KVF E+PVR+VVS+ ++G + G
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
+ D F M + EPN T V
Sbjct: 187 LYKEALDTFSKM----DVEPNLATYV 208
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 31 LGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDV 90
+G SD++V +LV Y R G+L A +VFDE+PVR++VS+N+ +SG +G ++
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 91 FKDMMRSFENEPNSVTLVS 109
+ ++ S+ P+S T+ S
Sbjct: 195 YHELKNSWI-VPDSFTVSS 212
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++HCC + G S++ + +L+ Y + G L ++ +VF+ + R+VV++ + G
Sbjct: 530 EIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYG 589
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+ F DM +S P+SV ++
Sbjct: 590 EGEKALETFADMEKS-GIVPDSVVFIA 615
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 1 MPNSVTIATLLTARDVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
+P+ T +LL D + V +VH A KLG SD YV + LVT+Y +F + A KV
Sbjct: 158 LPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 60 FDELPVR-NVVSYNAFMSGLLQ 80
FDELP R + V +NA ++G Q
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQ 239
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K LS V+T+L T Y + + SA K+FDE P +++ S+NA +SG QNG
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 84 PRLVFDVFKDMMRSFENEPNSVTL 107
+F++M +S E PN VT+
Sbjct: 401 TEDAISLFREMQKS-EFSPNPVTI 423
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H A+K G S YV T ++ Y + G + +F E ++V+YNA + G NG
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
L +FK++M S S TLVS
Sbjct: 302 ETELSLSLFKELMLS-GARLRSSTLVS 327
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VTI +L+A +G + + + VH S +YV+T+L+ Y + G + A ++
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
FD + +N V++N +SG +G + ++F +M+ S
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G+ D+ V +SL Y+R G L V +PVRN+V++N + G QNG
Sbjct: 112 QIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG 171
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
P V ++K MM+ PN +T V+
Sbjct: 172 CPETVLYLYK-MMKISGCRPNKITFVT 197
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T++++L+A VG +H +VHC K + + T+L+ Y++ G L A V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+ L +NV ++ A ++G +G R FD+F M+ S + PN VT ++
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVS-PNEVTFMA 412
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 33 VLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFK 92
V DV++ +SLV Y + A KVFDE+P RNVV++ A ++G +Q+ VF+
Sbjct: 236 VKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFE 295
Query: 93 DMMRSFENEPNSVTLVS 109
+M++S + PN TL S
Sbjct: 296 EMLKS-DVAPNEKTLSS 311
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 1 MPNSVTIATLLTA----RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSA 56
+P+ T LL A RD P Q H K G+ SD +V SL++ Y G+ A
Sbjct: 101 IPSRHTFPPLLKAVFKLRDSNPF---QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFA 157
Query: 57 GKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
++FD ++VV++ A + G ++NG+ F +M ++ N +T+VS
Sbjct: 158 SRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKT-GVAANEMTVVS 209
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH A KLG+ S++YV +SLV+ Y + + +A KVF+ L +N V +NA + G NG
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 84 PRLVFDVFKDMMRSFEN 100
V ++F DM S N
Sbjct: 409 SHKVMELFMDMKSSGYN 425
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVHC + K G+ D++ +SL+ Y + G++ A KVF LP +VVS NA ++G QN
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
V +F++M+ N P+ +T +
Sbjct: 610 LEEAVV-LFQEMLTRGVN-PSEITFAT 634
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 2 PNSVTIATLLTA----RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
PN+ T + A DVG + H S SDV+V T+ V +++ + A
Sbjct: 50 PNNFTFPFVAKACARLADVGCCEMVHAHLIKSPF--WSDVFVGTATVDMFVKCNSVDYAA 107
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
KVF+ +P R+ ++NA +SG Q+G F +F++ MR E P+SVT+++
Sbjct: 108 KVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFRE-MRLNEITPDSVTVMT 158
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H A K G+ D YVA SLV Y + G + SA KVFDE+PVRN V + M G L+
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLV 108
VF +F +MR +++TL+
Sbjct: 191 DPEVFRLFC-LMRDTGLALDALTLI 214
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLL-TARDVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN T+A +L + +G + H VH + G+ D TS + Y R G + A
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD +P RNV+S+++ ++ NG D F M+S PNSVT VS
Sbjct: 369 VFDMMPERNVISWSSMINAFGINGLFEEALDCFHK-MKSQNVVPNSVTFVS 418
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 2 PNSVTIATLLTARDVG----PIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
PN T++ L A + V QV +K G+ VYV TSL+ YL+ G + SA
Sbjct: 46 PNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQ 105
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+FDE+P R+ V +NA + G +NG + +F M++ P++ TLV+
Sbjct: 106 MLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ-GFSPSATTLVN 156
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 48/86 (55%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H A K G+ + V L+T Y +F + + +F++L ++S+N+ +SG +Q+G
Sbjct: 369 LHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGR 428
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
F+VF MM + P+++T+ S
Sbjct: 429 ASTAFEVFHQMMLTGGLLPDAITIAS 454
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 2 PNSVTIATLLTARDVGPI----HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
PN VTI ++L A G I H H A ++ +L +V+V ++L+ Y + G + +
Sbjct: 386 PNHVTIPSMLPA--CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQ 443
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VF+ +P +N+V +N+ M+G +G + V +F+ +MR+ +P+ ++ S
Sbjct: 444 IVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT-RLKPDFISFTS 494
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 1 MPNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+PN + L+A VG Q+HC + G+ D +V S+ Y+R G + A KVF
Sbjct: 119 LPNLFKVCAELSAFKVGK----QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
D + ++VV+ +A + + G V + +M S
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H A K +LS VYV +SL+ Y R G + + +VF E+P RN V++ A ++GL+ G
Sbjct: 130 LHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGR 189
Query: 84 PRLVFDVFKDMMRSFE 99
+ F +M RS E
Sbjct: 190 YKEGLTYFSEMSRSEE 205
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 2 PNSVTIATLLTARDVGPIHVPQ---VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
P+S T LL A G H+ VH +LG +DV+V L+ Y + L SA
Sbjct: 117 PDSFTFPHLLKACS-GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 59 VFDELPV--RNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VF+ LP+ R +VS+ A +S QNG P ++F MR + +P+ V LVS
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ-MRKMDVKPDWVALVS 227
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K+G+ + + SL T Y + G + +A +FD++ N++ +NA +SG +NG
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
R D+F +M+ + P+++++ S
Sbjct: 304 AREAIDMFHEMINK-DVRPDTISITS 328
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ +T+ LL ++ + + QVHC + K G+ + ++ L+ Y + G L A ++
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FD + R+VVS++ + G Q+G +FK+ M+S EPN VT V
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKE-MKSAGIEPNHVTFV 578
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 2 PNSVTIATLLTA----RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
PN T A++L + +D+G + +H K G S + TSL+T YLR ++ +
Sbjct: 265 PNEYTYASVLISCGNLKDIGNGKL--IHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL 322
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+VF + N VS+ + +SGL+QNG + F+ MMR +PNS TL S
Sbjct: 323 RVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD-SIKPNSFTLSS 373
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 2 PNSVTIATLLTARDVGPIHV----PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
PNS T+++ L R + + Q+H +K G D Y + L+ Y + G A
Sbjct: 366 PNSFTLSSAL--RGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD L +V+S N + QNG R D+F+ M+ + +PN VT++S
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI-NLGLQPNDVTVLS 474
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 30 KLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFD 89
K G+ S+V V S +T Y++ G + + ++FDE+PV+ ++++NA +SG QNG L +D
Sbjct: 184 KGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNG---LAYD 240
Query: 90 VFK--DMMRSFENEPNSVTLVS 109
V + + M+S P+ TLVS
Sbjct: 241 VLELYEQMKSSGVCPDPFTLVS 262
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 18 PIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVS--YNAFM 75
P+ Q+HC +K G ++ +V T+L++ Y + G++ A KVF+E P + +S YNA +
Sbjct: 69 PVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128
Query: 76 SGLLQN 81
SG N
Sbjct: 129 SGYTAN 134
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VHC A K G + D+ V ++++ Y ++G L A + F E+ +++V+SYN+ ++G + N
Sbjct: 330 VHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCR 389
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLV 108
P F +F + MR+ P+ TL+
Sbjct: 390 PEESFRLFHE-MRTSGIRPDITTLL 413
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 11 LTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVS 70
L A D G + V+C +D+YV T+LV Y + G L A KVFDE+P R++V+
Sbjct: 116 LRAIDDGKLIHSHVNCS----DFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVA 171
Query: 71 YNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
+NA +SG + V +F DM R PN T+V
Sbjct: 172 WNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIV 209
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 23 QVHCCASKLGV-LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
Q+HC K GV LSD +V T ++ Y+ +L A KVFDE+P +VV ++ M+G ++
Sbjct: 137 QIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRC 196
Query: 82 GAPRLVFDVFKDMM-RSFENEPNSVT 106
G +VFK+M+ R E + SVT
Sbjct: 197 GLGSEGLEVFKEMLVRGIEPDEFSVT 222
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 45/74 (60%)
Query: 30 KLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFD 89
K G+ +V++A ++++ Y+ F +L A KVFDE+ RN+V++ +SG +G P +
Sbjct: 33 KQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIE 92
Query: 90 VFKDMMRSFENEPN 103
+++ M+ S E N
Sbjct: 93 LYRRMLDSEEEAAN 106
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G S+ AT+LV Y++ G + + +FD + R+VVS+ + G QNG
Sbjct: 464 QIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNG 523
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
F F M+ + EPN VT +
Sbjct: 524 RVEEAFRYFHKMI-NIGIEPNKVTFL 548
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLLTARDVGPI--HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P++ T +LL A V Q+HC + KLG+ +VYV +L+ Y + SA
Sbjct: 126 LPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARC 185
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + VV YNA ++G + P +F++M + +PN +TL+S
Sbjct: 186 VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYL-KPNEITLLS 235
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H KLG S ++V+++LV Y+ G L+ A K+FD++PVR+ V Y A G +Q G
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 84 PRLVFDVFKDM 94
L +F++M
Sbjct: 216 AMLGLAMFREM 226
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 1 MPNSVTIATLLTARDVGPI--HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN+VTI + ++A + +VH A K+G + DV V SLV Y + G L A K
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARK 408
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVT 106
VFD + ++V ++N+ ++G Q G +++F M + PN +T
Sbjct: 409 VFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA-NLRPNIIT 455
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PNS+T+ T+L A ++H A K + +DV V ++LV Y + G L + KV
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD++P +NV+++N + +G + D+ + MM +PN VT +S
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ-GVKPNEVTFIS 623
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 23 QVHCCASKLGVLSD-VYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
Q+H K G D V VA +LV Y + G + KVFD + RN VS+N+ +S L
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 82 GAPRLVFDVFKDMMRSFEN-EPNSVTLVS 109
+ + F+ M+ EN EP+S TLVS
Sbjct: 178 EKWEMALEAFRCMLD--ENVEPSSFTLVS 204
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 2 PNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P++ T+ +L + R I +VH A K G+ D YV+ SL+ Y G + KV
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKV 103
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FDE+P R+VVS+N +S + NG VFK M + + + T+VS
Sbjct: 104 FDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVS 153
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 1 MPNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+ VT++T+++A +G + + +VH + G + DVY+ ++LV Y + G L A
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM-MRSFENEPNSVTLVS 109
VF LP +N+ +N+ + GL +G + +F M M S +PN+VT VS
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESV--KPNAVTFVS 1138
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+ K G+ SD+ V S +T Y R G A +VFDE+ ++++S+N+ +SGL Q G
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 83 APRLVFD---VFKDMMR 96
F+ +F+DMMR
Sbjct: 255 T--FGFEAVVIFRDMMR 269
Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 2 PNSVTIATLLTARDVGP--IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT L+ A ++H K G +S+ V S +T Y +F L A K
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+++ R ++S+NA +SG QNG +F + + E PN T S
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGS 477
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 49/87 (56%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q H A G SD++V+++L+ Y G L A KVFDE+P RN+VS+ + + G NG
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+FKD++ ++ +++ L S
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDS 183
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 3 NSVTIAT-LLTARDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N++T++T LL G + + + +H ++G+ DV V TS++ Y + G + +A K F
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
D + +NV S+ A ++G +G ++F M+ S PN +T VS
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS-GVRPNYITFVS 393
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN + AT+L++ R +H Q H K G +SD +V T+L Y + G + SA +
Sbjct: 517 PNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQF 576
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD + +N V +N + G NG +++ M+ S E +P+ +T VS
Sbjct: 577 FDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVS 625
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+HC A +LG D+++ SL+ Y + + A +F E+P NVVS+N + G Q
Sbjct: 270 QIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEY 329
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+ F MR +PN VT +S
Sbjct: 330 RSDKSVE-FLTRMRDSGFQPNEVTCIS 355
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 23 QVHCCASKLGV-LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
Q+HC K GV LSD +V T ++ Y+ +L+ A KVFDE+P +VV ++ M+G ++
Sbjct: 137 QIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRC 196
Query: 82 GAPRLVFDVFKDMM-RSFENEPNSVT 106
G +VF++M+ + E + SVT
Sbjct: 197 GLGSEGLEVFREMLVKGLEPDEFSVT 222
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VH-CCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
P+ ++ T LTA VG + + +H K + SDV+V T+LV Y + G + +A +
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
VF +L RNV S+ A + G G + + + R +P+SV L+
Sbjct: 276 VFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLL 325
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+VH + G D+ V +L+T Y++ G + SA +FD +P R+++S+NA +SG +NG
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
++F MR +P+ +TL S
Sbjct: 277 MCHEGLELFF-AMRGLSVDPDLMTLTS 302
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 37/141 (26%)
Query: 2 PNSVTIATLL----TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
PN T T++ T+RDV Q+HC A K+G+ S+V+V ++++ Y++ L A
Sbjct: 91 PNEFTFGTVIGSSTTSRDVK--LGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDAR 148
Query: 58 KVFDE-------------------------------LPVRNVVSYNAFMSGLLQNGAPRL 86
+ FD+ +P R+VV++NA + G Q G
Sbjct: 149 RCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEE 208
Query: 87 VFDVFKDMMRSFENEPNSVTL 107
+ F DM+R PN T
Sbjct: 209 AVNTFVDMLREGVVIPNESTF 229
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 1 MPNSVTIATLLTARDVGPIHVP--QVHCCASK-LGVLSDVYVATSLVTAYLRFGVLVSAG 57
+PN T +TA H +H CA K LG +V+V SL++ Y + G + +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 58 KVFDELP--VRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F++L RN+VS+N+ + G NG +F+ M++ PN+VT++
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTIL 335
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G+++DV+V +LV Y R G A KV D +PVR+ VS+N+ +S L+ G
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 83 ---APRLVFDVFKD 93
R +FD ++
Sbjct: 221 LVDEARALFDEMEE 234
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 43 LVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEP 102
+++ Y G++ A +VFD +PVR+VVS+NA ++ G V +VF M+ +P
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 103 NSVTLVS 109
+ TLVS
Sbjct: 303 DGFTLVS 309
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DV V T+LV Y + G + S+ VF + RNVV++NA SGL +G R+V D+F M+
Sbjct: 285 DVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI 344
Query: 96 RSFENEPNSVTLVS 109
R E +P+ +T +
Sbjct: 345 R--EVKPDDLTFTA 356
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K+ D+ VAT+L+ Y + L A + F+ + VRNVVS+NA + G QNG
Sbjct: 262 QIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNG 321
Query: 83 APRLVFDVFKDMMRSFEN-EPNSVTLVS 109
R +F M+ EN +P+ +T S
Sbjct: 322 EGREAMRLFGQML--LENLQPDELTFAS 347
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+HC K G+ S + +TSLV Y + G++V A +VF+ + R++V +NA +S + NG
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNG 222
Query: 83 APRLVFDVFKDM 94
F + K M
Sbjct: 223 MIDEAFGLLKLM 234
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 21 VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ 80
V Q H K G+ + +++ L+ AY + A K+FDE+P+RN+V++N + G++Q
Sbjct: 55 VKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQ 114
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T +L A +G + + + +H K G DVYV +LV Y + G +V A V
Sbjct: 193 PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNV 252
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD +P ++ VS+N+ ++G L +G D+F+ M+++ EP+ V + S
Sbjct: 253 FDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQN-GIEPDKVAISS 301
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VHC A K G+L D+ ++ L+T Y R G LVS+ +FDEL ++V+ +N+ ++ L QNG
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 84 PRLVFDVFKDMM 95
+F +M+
Sbjct: 169 YIAAVGLFIEMI 180
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+HC A + G++ D + +L+ Y + L SA VF + R++VS+N M+ L NG
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 84 PRLVFDVFKDMMRSFENEPNSVTL 107
PR FK M S + E ++VT
Sbjct: 270 PRKSLQYFKSMTGSGQ-EADTVTF 292
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 2 PNSVTIATLLTAR-DVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN +T LL+A +G + Q HC + G ++ +V+ +LV Y G+L + KV
Sbjct: 677 PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKV 736
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F V ++ ++N+ +S +G ++FK++ + E EPN + +S
Sbjct: 737 FRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFIS 786
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN T+A++L A + + + QVH K G +V + ++L T Y + G L
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VF P ++VVS+NA +SGL NG ++F++M+ EP+ VT V+
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAE-GMEPDDVTFVN 529
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 1 MPNSVTIATLLTARD------VGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLV 54
+PN+ T+A + A VG Q H K+ D+YV TSLV Y + G++
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGR----QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVE 170
Query: 55 SAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNS 104
KVF +P RN +++ +SG G VF +R E +S
Sbjct: 171 DGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDS 220
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+HC K G+L V ++ +LVT Y + L A K+FD RN ++++A ++G QNG
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
+F M S +P+ T+V
Sbjct: 302 ESLEAVKLFSRMF-SAGIKPSEYTIV 326
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+ H A K G+ + V++ TSLV Y + G + A +VFDE+ R++V + A ++GL N
Sbjct: 235 KTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNK 294
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F+ M+ + PNSV L +
Sbjct: 295 RQWEALGLFRTMISEEKIYPNSVILTT 321
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ VTIAT+L A ++HC A K L +V + TSL+ Y + GV ++
Sbjct: 416 PDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRL 475
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTL 107
FD L RNV ++ A + ++N R +VF+ M+ S ++ P+SVT+
Sbjct: 476 FDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLS-KHRPDSVTM 522
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 3 NSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N+ T + LL A R +H QVH G+ S+ ++ T LV Y G + A KVF
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSF 98
DE NV S+NA + G + +G R ++D++ +F
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKR-----YQDVLSTF 202
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 31 LGVLS-DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFD 89
LG++ DV S++ + + G++ A +FDE+P RN VS+N+ +SG ++NG + D
Sbjct: 185 LGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALD 244
Query: 90 VFKDMMRSFENEPNSVTLVS 109
+F++M + +P+ T+VS
Sbjct: 245 MFREMQEK-DVKPDGFTMVS 263
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH + DVYVA+ L+T Y++ G LV A VFD ++++ +N+ +SG +G
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F +M S PN VTL++
Sbjct: 412 LGEEALKIFHEMPSS-GTMPNKVTLIA 437
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH K+G+ DV++ SL+ Y + G + A K+FDE+ R+ VS+N+ +SG + G
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
+ D+F+ M EP+ TLVS
Sbjct: 214 AKDAMDLFRKMEEE-GFEPDERTLVS 238
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P++ T++T+L+A VG + + Q+ AS+L + ++YVAT LV Y + G + A +V
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
F+ +PV+N ++NA ++ G + +F M
Sbjct: 392 FEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM 426
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 3 NSVTIATLLTARDVG---PIH-VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+ VT++T+L A + +H VHCCA K G +DV V+ SL+ AY + G + K
Sbjct: 416 DEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRK 475
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFDEL N+ + ++G +NG + ++M R P+ VT++S
Sbjct: 476 VFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDR-MNLIPDEVTILS 525
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 2 PNSVTIATLLTAR-DVGPIHV-PQVHCCASKLG-VLSDVYVATSLVTAYLRFGVLVSAGK 58
PN +TI +L A ++G + + VH K G V D+ V SL+ AY + G + SA K
Sbjct: 254 PNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFK 313
Query: 59 VFDELP--VRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F E+P +N+VS+ +S +G + +FKDM R +PN VT++S
Sbjct: 314 FFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER-LGLKPNRVTMIS 365
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 30 KLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFD 89
KLG S VYV T+LV YL G ++ A KVFDE+P RN V++N ++GL G
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGD------ 204
Query: 90 VFKDMMRSFENEPNSVTLVS 109
F+ + E PN T+VS
Sbjct: 205 -FEKALCFLEKMPNR-TVVS 222
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+HC K ++ LV YLR G V A K+FDE+P R++VS+N+ +SG G
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 84 PRLVFDVFKDMMRS-FENEPNSVTLVS 109
F+V MM S PN VT +S
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLS 139
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVPQ--VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT ++++A G +H K GVL +V V + + Y + G L S+ K+
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F++L ++N+VS+N + LQNG F +M R +EP+ T ++
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF-NMSRRVGHEPDQATFLA 240
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+VH K GV D + TSL+ Y + G L A KVFD +PVR++V+++ +S L+NG
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+FK M+ EP++VT++S
Sbjct: 182 EVVKALRMFKCMVDD-GVEPDAVTMIS 207
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 2 PNSVTIATLLTARDVGPIHVP---QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
P++ T+A+ ++A + + VP Q+H + V SD +V SL+ Y + G + SA
Sbjct: 403 PDAFTLASSISACENAGL-VPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSAST 460
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VF+++ R+VV++N+ + G QNG +F M S+ E N VT ++
Sbjct: 461 VFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYL-EMNEVTFLA 510
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DV +++ Y + G + A +FD++P R+VV+YN+ M+G +QN ++F DM
Sbjct: 282 DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDME 341
Query: 96 RSFENEPNSVTLV 108
+ P+ TLV
Sbjct: 342 KESHLLPDDTTLV 354
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G+ SD+++ L+ YL+ G L + ++FD +P R+ VSYN+ + G ++ G
Sbjct: 142 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
Query: 83 ---APRLVFDVFKDMMRSF 98
+ R +FD+ M++
Sbjct: 202 LIVSARELFDLMPMEMKNL 220
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 31/117 (26%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG- 82
+HC K G+ D+++ +L+ Y F SA K+FDE+P +N+V++N+ + ++G
Sbjct: 130 LHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGD 189
Query: 83 --APRLVFD----------------------------VFKDMMRSFENEPNSVTLVS 109
+ RLVFD +F MMR ++ N VT+VS
Sbjct: 190 VVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVS 246
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH K G + T+L+ Y ++G LV + +VF+ + +++VS+NA +SG L+NG
Sbjct: 105 QVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNG 164
Query: 83 APRLVFDVFKDMMRS 97
+ VF M R
Sbjct: 165 KGKEALGVFAAMYRE 179
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 22 PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
Q+HC A + G +SD + L+ Y + G +V A +F +P ++VVS+ + + N
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVN 360
Query: 82 GAPRLVFDVFKDMMRSFENE-PNSVTLV 108
G ++F++M PNSVT +
Sbjct: 361 GDGVKALEIFREMCEEGSGVLPNSVTFL 388
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H + G S +YV SL+ Y G + SA KVFD++P +++V++N+ ++G +NG
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P ++ + M S +P+ T+VS
Sbjct: 70 PEEALALYTE-MNSKGIKPDGFTIVS 94
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ TI +LL+A +G + + +VH K+G+ +++ + L+ Y R G + A +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FDE+ +N VS+ + + GL NG + ++FK M + P +T V
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 195
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
PN T +++L + + G V +HC K G+ SDV+V ++L+ + + G A VFD
Sbjct: 160 PNVYTYSSVLRSCN-GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS-FENEPNSVTLV 108
E+ + + +N+ + G QN + ++FK M R+ F E ++T V
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 266
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
D+ + +LV Y + G L A +VF+++ R+V++++ +SGL QNG + +F + M
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLF-ERM 350
Query: 96 RSFENEPNSVTLV 108
+S +PN +T+V
Sbjct: 351 KSSGTKPNYITIV 363
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K G DV TSL++ Y G L A K+FDE+P R+VV++ A SG +G
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 84 PRLVFDVFKDMM 95
R D+FK M+
Sbjct: 193 HREAIDLFKKMV 204
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 48/68 (70%)
Query: 42 SLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENE 101
+L+ +++ G++ A +VFD+ +++ S+NA +SG Q+ +P+L +F++M+ S + +
Sbjct: 376 ALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVK 435
Query: 102 PNSVTLVS 109
P+++T+VS
Sbjct: 436 PDAITMVS 443
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
M N VT+AT+++A +G I + A KL + V+V+T+L+ Y L A K
Sbjct: 170 MLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARK 229
Query: 59 VFDELPVRNVVSYNAFMSGLLQNG 82
+FDE+P RN+V++N ++G + G
Sbjct: 230 LFDEMPERNLVTWNVMLNGYSKAG 253
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 4 SVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDEL 63
S + A+LL + Q+H + G L +V+ + LV Y + G + A +VF+E+
Sbjct: 462 SASFASLLLGK--------QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM 513
Query: 64 PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
P RN VS+NA +S NG F M+ S +P+SV+++
Sbjct: 514 PDRNAVSWNALISAHADNGDGEAAIGAFAKMIES-GLQPDSVSIL 557
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
PN T ++LL + + H LG+ D YVAT LV Y + G +VSA KVFD
Sbjct: 128 PNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGI--DPYVATGLVDVYAKGGDVVSAQKVFD 185
Query: 62 ELPVRNVVSYNAFMSGLLQNG---APRLVFD 89
+P R++VS A ++ + G A R +FD
Sbjct: 186 RMPERSLVSSTAMITCYAKQGNVEAARALFD 216
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 43/70 (61%)
Query: 40 ATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFE 99
+T+++T Y + G + +A +FD + R++VS+N + G Q+G P +F+ ++ +
Sbjct: 195 STAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK 254
Query: 100 NEPNSVTLVS 109
+P+ +T+V+
Sbjct: 255 PKPDEITVVA 264
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 22 PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
++H K G D++ T L Y + + A KVFD +P R++VS+N ++G QN
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 82 GAPRLVFDVFKDMMRSFEN-EPNSVTLVS 109
G R+ ++ K M EN +P+ +T+VS
Sbjct: 215 GMARMALEMVKSMCE--ENLKPSFITIVS 241
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P V++ L A D+G + + +H + +LG+ +V V SL++ Y + + +A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F +L R +VS+NA + G QNG P + F MRS +P++ T VS
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ-MRSRTVKPDTFTYVS 443
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 2 PNSVTIATLLTARDVGPIHV----PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
P+ +TI ++L A V + + ++H A + G S V ++T+LV Y + G L +A
Sbjct: 234 PSFITIVSVLPA--VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
++FD + RNVVS+N+ + +QN P+ +F+ M+
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTARDVGPI--HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P++ T +++TA I H +H + + +V+V T+LV Y + G ++ A +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD + R+V ++NA + G +G + ++F++M + +PN VT +S
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG-TIKPNGVTFLS 544
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H + G S +YV SL+ Y G + SA KVFD++P +++V++N+ ++G +NG
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P ++ + M S +P+ T+VS
Sbjct: 203 PEEALALYTE-MNSKGIKPDGFTIVS 227
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ TI +LL+A +G + + +VH K+G+ +++ + L+ Y R G + A +
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FDE+ +N VS+ + + GL NG + ++FK M + P +T V
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 1 MPNSVTIAT-LLTARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN T A+ L + +G + ++H A KLG+ +D +V SLV Y G + A
Sbjct: 323 LPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVS 382
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTL 107
VF ++ +++VS+N+ + G Q+G + F +F M+R EP+ +T
Sbjct: 383 VFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR-LNKEPDEITF 430
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 34 LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKD 93
+ D S+V YL+FG + A K+F ++P +NV+S+ + GL QN D+FK+
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 94 MMR 96
M+R
Sbjct: 216 MLR 218
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 37 VYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
V + T ++T Y R LV A +FDE+PVR+VVS+N+ +SG ++ G +F +M
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H KLG SD + LV +Y++ + +A K+FDE+ NVVS+ + +SG G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P+ +F+ M PN T S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFAS 136
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 37 VYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
V ++T+LV YL+F +A VFD++ V+N VS+ A +SG + N + D+F+ M R
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
Query: 97 SFEN-EPNSVTLVS 109
EN PN VTL+S
Sbjct: 245 --ENLRPNRVTLLS 256
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+HC K G D V+ SL++ Y +F + KVFDE+ R+ VSY + ++ Q+G
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG 127
Query: 83 APRLVFDVFKDM 94
+ K+M
Sbjct: 128 LLYEAMKLIKEM 139
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 26 CCASKL---GVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
CCA ++ DV V +++T Y R G + +A ++FD +P +NV S+ +SG QNG
Sbjct: 134 CCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNG 193
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F M + +PN +T+VS
Sbjct: 194 NYSEALKMFLCMEKDKSVKPNHITVVS 220
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 32 GVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVF 91
G SD + T+L+TAY + G L A +VFDE+ R+V +NA ++G + G + ++F
Sbjct: 112 GFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELF 171
Query: 92 KDMMRSFENEPNSVTLVS 109
M R +N + T++S
Sbjct: 172 DSMPR--KNVTSWTTVIS 187
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN +T+ ++L A ++G + + ++ A + G ++YV + + Y + G++ A ++
Sbjct: 213 PNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRL 272
Query: 60 FDEL-PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F+EL RN+ S+N+ + L +G +F M+R E +P++VT V
Sbjct: 273 FEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGE-KPDAVTFV 321
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 19 IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGL 78
+H + C+ +L VYV ++++ Y + G + AGKVFD++P RN VS+N + G
Sbjct: 34 LHALSITLCSV---LLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGY 90
Query: 79 LQNGAPRLVFDVFKDMMRSFENEPNSVTL 107
+ G + VF + MR F PN T+
Sbjct: 91 SKYGDVDKAWGVFSE-MRYFGYLPNQSTV 118
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 1 MPNSVTIATLLTARDVGPIHVPQVHCCASKLGV-LSDVYVATSLVTAYLRFGVLVSAGKV 59
+PN T++ LL+ + Q+H + K G+ ++D +V T L+ Y R +L A +V
Sbjct: 112 LPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQV 171
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
F+++P +++ ++N MS L G + F++++R
Sbjct: 172 FEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVR 208
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G S+V+V ++L+ Y R+G++ A VFD L RN VS+NA ++G +
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 83 APRLVFDVFKDMMR 96
++F+ M+R
Sbjct: 242 GTEKALELFQGMLR 255
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 52.4 bits (124), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLT--ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+S T++++L + V I ++H + G+ SDVY+ +SLV Y + + + +V
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F L R+ +S+N+ ++G +QNG +F+ M+ + + +P +V S
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTA-KVKPGAVAFSS 348
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P +V ++++ A + +H+ Q+H + G S++++A++LV Y + G + +A K+
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD + V + VS+ A + G +G +F++M R +PN V V+
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ-GVKPNQVAFVA 449
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 52.0 bits (123), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 2 PNSVTIAT-LLTARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PNS +++ LL ++ + + Q+H SK + +DV TSL++ Y + G L A K+
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+ + ++VV++NA +SG Q+G +F++M+ + + P+ +T V+
Sbjct: 342 FEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDN-KIRPDWITFVA 390
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H CA KLG+ S V VA++L+ Y + G+L A +F +P +N++ +N +SG +NG
Sbjct: 342 IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGD 401
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
+F + + +P+ T ++
Sbjct: 402 SIEAIKLFNQLKQERFLKPDRFTFLN 427
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H +K G +S+ ++ SL+ Y L A KVFDE+P +V+S+N+ +SG +Q+G
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 83 APRLVFDVFKDMMRS--FENE 101
+ +F ++ RS F NE
Sbjct: 136 RFQEGICLFLELHRSDVFPNE 156
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLL-TARDVGPIHVPQ-VHCCASKLGVLSD-VYVATSLVTAYLRFGVLVSAGK 58
P+ T+ T+L + +G + + +H A G+ D + V +LV Y + G L +A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
+F ++ RNVVS+N +SG NG D+F M+ + PN T +
Sbjct: 292 IFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFL 341
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
D+ S+V AY + G++ A K+FDE+P RNV+S++ ++G + G + D+F++M
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 96 RSFENE----PNSVTL 107
NE PN T+
Sbjct: 187 LPKPNEAFVRPNEFTM 202
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T++T+L+A +G + + VH K V D+ + T+L+ Y + G L A +V
Sbjct: 197 PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 60 FDEL-PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F+ L ++V +Y+A + L G F +F +M S PNSVT V
Sbjct: 257 FNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH K G++ +V+V +SL+ Y + G+ A KVF + N+V++N+ +S +N
Sbjct: 497 QVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNN 556
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
P L D+F ++M S P+SV++ S
Sbjct: 557 LPELSIDLF-NLMLSQGIFPDSVSITS 582
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 2 PNSVTIATLLTARDVGP-IHVPQ-VHCCASKLGV-LSDVYVATSLVTAYLRFGVLVSAGK 58
PN++T+ +LL A V + + H A + + ++D+ V TS+V AY + G + A +
Sbjct: 424 PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARR 483
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD++ +N++S+ +S NG P +F D M+ PN+VT ++
Sbjct: 484 TFDQITEKNIISWTVIISAYAINGLPDKALALF-DEMKQKGYTPNAVTYLA 533
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 12/115 (10%)
Query: 2 PNSVTIATLLTA------RDVGPIHVPQVHCCASKLGV-LSDVYVATSLVTAYLRFGVLV 54
P+ VT+ ++L A DVG VH + + G L+DV+V SL+ Y + +
Sbjct: 224 PDCVTVTSVLKACTVMEDIDVGR----SVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVD 279
Query: 55 SAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
SA +VFDE RN+VS+N+ ++G + N ++F M++ E + VT+VS
Sbjct: 280 SAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE-AVEVDEVTVVS 333
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 1 MPNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+P+ + + L R+ G + +HC K SD ++ +SL+ Y +FG + +A KVF
Sbjct: 120 VPSLLKASRNLLDREFGKM----IHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVF 175
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
+L +++V +NA +SG N ++ KDM
Sbjct: 176 SDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q H + G S++ T+LV Y ++G + +A VFD+LP +N++S+NA M G +G
Sbjct: 346 QAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHG 405
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F+ M+ + PN VT ++
Sbjct: 406 RGTDAVKLFEKMIAA-NVAPNHVTFLA 431
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 6 TIATLLTAR-DVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDEL 63
T A +L A +G I+V Q+H CA KLGV+ + +V+ L+ Y + G + A F+ +
Sbjct: 226 TFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECM 285
Query: 64 PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
P + V++N ++G +G + DM S
Sbjct: 286 PEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDS 319
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
D Y SL+ Y++ V A K+FD +P RNVVS+ A M G +G V +FK M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 96 RSFENEPN 103
S E+ PN
Sbjct: 128 FSGESRPN 135
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++H + G +V V ++L+ Y + G + SA +V+ ++ +RN++++NA +S L QNG
Sbjct: 383 EIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNG 442
Query: 83 APRLVFDVFKDMMR 96
F DM++
Sbjct: 443 RGEEAVSFFNDMVK 456
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 3 NSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
++ T A+LL+ +VG I Q+H KLG+ + V +L++ Y + G + +A +VF
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+ + RNV+S+ + ++G ++G V + F M+ +PN VT V+
Sbjct: 533 NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE-GVKPNEVTYVA 580
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSD-VYVATSLVTAYLRFGVLVSAGK 58
PNS+T+A++L AR H + HC + D + SLV Y + G +V+A +
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
V D + R+ V+Y + + G G + +FK+M RS +P+ VT+V+
Sbjct: 439 VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRS-GIKPDHVTVVA 488
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 2 PNSVTIATLLT--ARDVGPIHVPQVHCCASKLGVLSDVYVA-TSLVTAYLRFGVLVSAGK 58
PN +T+A++L AR H + HC + D + SLV Y + G +++A +
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + R+ V+Y + + G + G + FKDM RS +P+ VT+V+
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS-GIKPDHVTMVA 530
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 2 PNSVTIATLLT--ARDVGPIHVPQVHCCASKLGVLSDVYVA-TSLVTAYLRFGVLVSAGK 58
PN +T+A++L AR H + HC + D + SLV Y + G +++A +
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + R+ V+Y + + G + G + FKDM RS +P+ VT+V+
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS-GIKPDHVTMVA 530
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 21 VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ 80
+ ++H A K +Y +L+++ +R G LV A KVFD +P +N V++ A + G L+
Sbjct: 101 IKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLK 160
Query: 81 NGAPRLVFDVFKDMMR---SFENEPNSVTLVS 109
G F +F+D ++ F NE V L++
Sbjct: 161 YGLEDEAFALFEDYVKHGIRFTNERMFVCLLN 192
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H A K LS+V+V ++L+ Y + G + A +VFD +P +N+VS+ A + G +NG
Sbjct: 508 IHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGF 567
Query: 84 PR 85
R
Sbjct: 568 CR 569
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+ N++T+ ++L A VG + + ++H K + +VY+ ++LV Y + G A
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFN 441
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
V +LP R+VVS+ A +SG G D K+M++ EPN T S
Sbjct: 442 VLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE-GVEPNPFTYSS 491
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN T+ ++L A + QVH K + +DV+V TSL+ Y + G + K
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + RN V++ + ++ + G +F+ M R N++T+VS
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR-HLIANNLTVVS 390
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 4 SVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDEL 63
S+ I T RD I QVHC A + G+L +V+ +L++ Y R G L S K FDE+
Sbjct: 61 SLAITTARHLRDT--IFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEI 118
Query: 64 PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
+V S+ +S + G F+VF M
Sbjct: 119 DEPDVYSWTTLLSASFKLGDIEYAFEVFDKM 149
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 2 PNSVTIATLL-TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
P+ T +LL T+ D+ + + V C K G+ S + ++ +L++AY + G + A +F
Sbjct: 387 PDEFTFGSLLATSLDLDVLEM--VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLF 444
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
+ +N++S+NA +SG NG P + F ++ S
Sbjct: 445 ERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLES 481
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 1 MPNSVTIATLLTARDVGPI--HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+ ++T+L+A + P Q+H + G+ D + L+ +Y++ G +++A K
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
+F+ +P +N++S+ +SG QN + ++F M +
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 32 GVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVF 91
G+ D Y++ L+ Y R G +V A KVF+++P RN+VS++ +S +G VF
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF 133
Query: 92 KDMMRSFENEPNSVTLVS 109
+ R+ ++ PN L S
Sbjct: 134 LEFWRTRKDSPNEYILSS 151
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTAR-DVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T A ++TA ++ + + Q HC K G+ + Y+ +L+ Y + G A K
Sbjct: 553 PDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKA 612
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FD R+VV +N+ +S +G + + + MM S EPN +T V
Sbjct: 613 FDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM-SEGIEPNYITFV 660
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H C + +YV ++L+ Y + L A VFD + +NVVS+ A + G Q G
Sbjct: 291 QIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTG 350
Query: 83 APRLVFDVFKDMMRSFENEPNSVTL 107
+F DM RS +P+ TL
Sbjct: 351 RAEEAVKIFLDMQRS-GIDPDHYTL 374
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG- 82
+H A K G+ VYV T LV Y R G + A K FD++ +N VS+N+ + G L++G
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 83 --APRLVFD 89
R VFD
Sbjct: 186 LDEARRVFD 194
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVHC K G ++ + L+ Y + + A KVFD +P RNVVS++A MSG + NG
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 83 APRLVFDVFKDMMRS--FENE 101
+ +F +M R + NE
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNE 107
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 2 PNSVTIAT------LLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
PN T +T LL A + G Q+H K+G V V SLV Y + G +
Sbjct: 105 PNEFTFSTNLKACGLLNALEKGL----QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 160
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS-FENEPNSVTLVS 109
A KVF + R+++S+NA ++G + G D F M + + P+ TL S
Sbjct: 161 AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 8 ATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRN 67
A L+TAR H +H K G L+D + SL+ AY + G L +VFD++ R+
Sbjct: 380 AGLVTAR-----HALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRD 434
Query: 68 VVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VVS+N+ + +G + VF+ M + P+S T ++
Sbjct: 435 VVSWNSMLKAYSLHGQVDSILPVFQKM----DINPDSATFIA 472
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
+V +A L+ Y + G ++ A +VFD +P RNVVS+ A ++G +Q G + F +F M+
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 96 RSFENEPNSVTLVS 109
PN TL S
Sbjct: 155 S--HCFPNEFTLSS 166
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 22/108 (20%)
Query: 2 PNSVTIATLLTARDVGPIHVP------QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
PN T +LTA + V Q+H K G L+ V+V+ SL++ Y +
Sbjct: 179 PNEYTFVAILTA----CVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDK-----D 229
Query: 56 AG-------KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
+G K+FDE+P R+V S+N +S L++ G FD+F +M R
Sbjct: 230 SGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNR 277
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
D T ++TAY+ FG++ SA ++F + +N ++YNA M+G +NG +F DM+
Sbjct: 350 DAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDML 409
Query: 96 R 96
+
Sbjct: 410 Q 410
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 21 VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ 80
V +HC A + G+LSD++ +L+ Y + SA ++FDE P R+VV+YN + GL++
Sbjct: 136 VKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVK 195
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ V++ ++++A ++G + + VH C G+ S++ + +L+ Y + G L + V
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN-EPNSVTLV 108
F+++P RNVVS+++ ++ L +G +F M + EN EPN VT V
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQ--ENVEPNEVTFV 449
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++H + G L D VATSLV Y G + A KVFDE+PVR++VS+N + G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 83 APRLVFDVFKDM 94
++K M
Sbjct: 188 LHNQALSMYKRM 199
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+S T+ +LL+A + + + +VH + + D++V S+++ Y+ G L +
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 552
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
+FD + +++VS+N ++G LQNG P VF+ M+
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH K G++ DV+V +LV+ Y G + A ++FD +P RN+VS+N+ + NG
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 84 PRLVFDVFKDMMRSFEN-----EPNSVTLVS 109
F + +MM EN P+ TLV+
Sbjct: 269 SEESFLLLGEMME--ENGDGAFMPDVATLVT 297
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 43/87 (49%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H C +KLG+ S+V V T LV Y++ SA + F E+ N VS++A +SG Q
Sbjct: 306 QIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMS 365
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
FK + + NS T S
Sbjct: 366 QFEEAVKTFKSLRSKNASILNSFTYTS 392
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H + G+ S+ + T +V Y++ G LV A +VFD++ V+ V+ M G Q G
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264
Query: 83 APRLVFDVFKDMM 95
R +F D++
Sbjct: 265 RARDALKLFVDLV 277
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH A K ++ Y ++L+T Y + G L A +VF+ + ++V++ AF+SG G
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F+ M+ S +PNSVT ++
Sbjct: 468 NASEALRLFEKMV-SCGMKPNSVTFIA 493
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 2 PNSVTIATLLTA-RDVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ + L+ A ++G I H QVHC +D V +SLV Y + G+L SA V
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFK 92
FD + V+N +S+ A +SG ++G ++F+
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH LG S V+++ +L+ Y + +++A +F + R+VVS+ + + G+ Q+G
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
++ DM+ S +PN VT V
Sbjct: 319 QAEKALALYDDMV-SHGVKPNEVTFV 343
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 2 PNSVTIATLLTARDV--GPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T+ +LL A +HC +K G +S + AT LV Y + G L SA K+
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 60 FDEL----PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+ + ++VV + A +SG +G VF +M+RS PN +T S
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT-PNEITFTS 530
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 2 PNSVTIATLL-----TARDVGPIHVPQVHCCASKLGVL-SDVYVATSLVTAYLRFGVLVS 55
PN TIA +L +++ Q+H + L + V+V SLV+ YLR G +
Sbjct: 222 PNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEE 281
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
A +F + +++VS+N ++G N F +F +++ + P+SVT++S
Sbjct: 282 AASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIIS 335
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFG-VLVSAGK 58
P+SVT A +L R + +H K G+ D V +LV+ Y +FG + A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD + ++VVS+NA ++G +N F F M++ EPN T+ +
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKE-PTEPNYATIAN 229
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 41/62 (66%)
Query: 34 LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKD 93
+ D+++ T+L++ Y + G + +A K+F E+P +N VS+ A ++G ++ G+ D+F+
Sbjct: 242 VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 94 MM 95
M+
Sbjct: 302 MI 303
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 34 LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKD 93
L ++Y ++V+ Y++ G+LV A VFD +P R+VVS+N + G Q+G +K+
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKE 169
Query: 94 MMRS 97
RS
Sbjct: 170 FRRS 173
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q H K+G S + +L+T Y + GV+ A +VF +P + VS+NA ++ L Q+G
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
DV+++M++ P+ +TL++
Sbjct: 498 HGAEAVDVYEEMLKK-GIRPDRITLLT 523
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 29 SKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVF 88
SK+G +V +ATSL+ Y + G L +A +FD +P R +VS+N+ ++G QNG
Sbjct: 245 SKVGF--NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEAL 302
Query: 89 DVFKDMMRSFENEPNSVTLVS 109
+F DM+ P+ VT +S
Sbjct: 303 CMFLDML-DLGIAPDKVTFLS 322
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 3 NSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N T +L+A D+G + + + VH + +V +L+ Y R G + A +VF
Sbjct: 254 NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVF 313
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM-RSFENEPNSVTLVS 109
+ ++V+SYN +SGL +GA + F+DM+ R F PN VTLV+
Sbjct: 314 RVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGF--RPNQVTLVA 361
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 34 LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKD 93
L DV ++ Y + + A F+ +PVR+VVS+N+ +SG LQNG +VF D
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 94 MMR 96
M R
Sbjct: 171 MGR 173
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H ++G +DV A++L+ Y + V + +VF +P +N VS++A ++G +QN
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 83 APRLVFDVFKDMMR 96
L FK+M +
Sbjct: 261 LLSLALKFFKEMQK 274
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 2 PNSVTIATLL-TARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T AT+L T ++ + Q+H K + SDVY+ ++LV Y + G L + +
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 660
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN-EPNSVTLVS 109
F++ R+ V++NA + G +G +F+ M+ EN +PN VT +S
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI--LENIKPNHVTFIS 709
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H A G ++ V L+T+Y + G VS VFD + RNV++ A +SGL++N
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
+F M R + PNSVT +S
Sbjct: 237 HEDGLRLFSLMRRGLVH-PNSVTYLS 261
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 39 VATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSF 98
V SL++ Y + G LV A K+FDE+P+R+V+S N G L+N F + K M+ S
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 99 ENEPNSVTLV 108
+ ++T+V
Sbjct: 152 GFDHATLTIV 161
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH A K G +DV+ +L+ Y + G S KVFD++P R++VS+ + GL+ N
Sbjct: 140 QVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNS 199
Query: 83 APRLVFDVFKDM-MRS 97
VF M MR+
Sbjct: 200 QLDSAEIVFNQMPMRN 215
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN+VT+A++L A +G + + Q+H + + + +V+VA++LV Y + G + A +
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDM 578
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F + RN V+Y + G Q+G +F M S +P+++T V+
Sbjct: 579 FSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES-GIKPDAITFVA 627
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
+V TS+V Y R+G + A ++F E+P RN+VS+ A +SG N R +F +M
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK 289
Query: 96 RSFEN-EPNSVTLVS 109
+ + PN TL+S
Sbjct: 290 KDVDAVSPNGETLIS 304
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 23 QVHCCASKLGVL--SDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ 80
+HC +K D+ + SLV+ Y + G + A ++F ++ ++ VS+N+ + GL
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSH 546
Query: 81 NGAPRLVFDVFKDMMRSFENEPNSVTLV 108
+G ++FK+M+ S +PNSVT +
Sbjct: 547 HGLADKALNLFKEMLDS-GKKPNSVTFL 573
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 5 VTIATLLTARDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDEL 63
V + L + D+G + + VH + G+ +V V TSLV Y + G + A +VF +
Sbjct: 219 VMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM 278
Query: 64 PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
+ VS+ + +SG QNG F+ + M+S +P+ VTLV
Sbjct: 279 MFKTAVSWGSLISGFAQNGLANKAFEAVVE-MQSLGFQPDLVTLV 322
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 2 PNSVTIATLL------TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
PN T A +L T ++G QVH +++G + ++SLV Y + G + S
Sbjct: 317 PNEYTFAGVLNACADLTTEELGK----QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 372
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
A V D P ++VS+ + + G QNG P F +++S +P+ VT V+
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS-GTKPDHVTFVN 425
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 2 PNSVTIATLLTARDVGPIH--VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T +LL A V V ++H A KLG + SLV AY++ G L +A K+
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Query: 60 FDELPVRNVVSYNAFMSGL-LQNGAPRLVFDVFKDMMR 96
+ R+++S A ++G QN FD+FKDM+R
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIR 309
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++H A+K+G+ S ++V LV+ Y + G L A V DE+ R+VVS+N+ + G QN
Sbjct: 161 KIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQ 220
Query: 83 APRLVFDVFKDM 94
+V ++M
Sbjct: 221 RFDDALEVCREM 232
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DV T L+ AY R G + A ++F+ LP +++V++ A ++G QN P+ + F M
Sbjct: 214 DVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME 273
Query: 96 RS 97
+S
Sbjct: 274 KS 275
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 44/74 (59%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+HC K G D+++ T+L+T YL+ G ++ +V + +P ++VV + +SGL++ G
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 84 PRLVFDVFKDMMRS 97
VF +M++S
Sbjct: 327 AEKALIVFSEMLQS 340
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q H + G +DVYV SLV Y G + +AG++F ++ R+VVS+ + ++G + G
Sbjct: 138 QTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCG 197
Query: 83 APRLVFDVFKDM 94
++F +M
Sbjct: 198 MVENAREMFDEM 209
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 1 MPNSVTIATLLTARDVGPIHV--PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN T++++L +G Q+H K+G D+YV+ +L+ Y + + +A K
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
+F EL +N VS+N + G G F +F++ +R+
Sbjct: 405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN 443
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH A K V V+ SL+ Y + G + A VF+E+ +V S+NA +SG +G
Sbjct: 470 QVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHG 529
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
R + D+M+ + +PN +T +
Sbjct: 530 LGRQALRIL-DIMKDRDCKPNGLTFL 554
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G S+V+VA+S V Y + G L + +F E+ +N+ +N +SG ++
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
P+ V +F+ M + PN VT S
Sbjct: 344 RPKEVMILFEKMQQD-GMHPNEVTFSS 369
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT+ +L+A G + + + +H A + + SDV+V+ SLV Y + G L A V
Sbjct: 258 PNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSV 317
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENE--PNSVTLV 108
F +++ ++N+ ++ +G VF++MM+ N+ P+ +T +
Sbjct: 318 FKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFI 368
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
D+ S++ +R G +++A K+FDE+P +N++S+N +S L P + +F++M+
Sbjct: 183 DIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMV 242
Query: 96 RS-FENEPNSVTLV 108
R+ F+ +++ L+
Sbjct: 243 RAGFQGNESTLVLL 256
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 2 PNSVTIATLLTARDVGPI--HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PNS T+A +L+ H Q+H A K G + V V+ +L+T Y + G + SA +
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470
Query: 60 FDELPV-RNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
FD + R+ VS+ + + L Q+G ++F+ M+
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
VHC K G++ VY+ +L+ Y + G + A K+FDE+P+R S+N +S + G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRG 94
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DV +++ Y G + + +VFD++P RNV S+N + G QNG V FK M+
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 96 RSFENEPNSVTL 107
PN T+
Sbjct: 180 DEGSVVPNDATM 191
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 21 VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVL--VSAGKVFDELPVRNVVSYNAFMSGL 78
V +H KLG+ SD+YV +L+ Y R G L A K+F+++ R+ VS+N+ + GL
Sbjct: 136 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL 195
Query: 79 LQNGAPRLVFDVFKDM 94
++ G R +F +M
Sbjct: 196 VKAGELRDARRLFDEM 211
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+++T ++LL ++ + Q+HC + + D+++ ++L+ AY + + A
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+F + +VV + A +SG L NG ++F+ +++ + PN +TLVS
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK-VKISPNEITLVS 446
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 29 SKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVF 88
S LG+ + +VA+SL+ AYL +G + K+FD + ++ V +N ++G + GA V
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 89 DVFKDMMRSFENEPNSVTL 107
F +MR + PN+VT
Sbjct: 225 KGFS-VMRMDQISPNAVTF 242
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 43 LVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEP 102
++ Y+R G +A +FD++ R+VVS+N +SG NG + +VF++M + + P
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG-DIRP 272
Query: 103 NSVTLVS 109
N VTLVS
Sbjct: 273 NYVTLVS 279
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT+ ++L A +G + + + +H A G+ D + ++L+ Y + G++ A V
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
F+ LP NV++++A ++G +G D F M ++
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 369
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH K G V +L+ Y++F LV A KVFDE+ R+V+S+N+ +SG + G
Sbjct: 130 QVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLG 189
Query: 83 APRLVFDVFKDMM 95
+ +F M+
Sbjct: 190 QMKKAKGLFHLML 202
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLL-TARDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ +++ ++L + +G + + + +H A + G L V +L+ Y + GV+ A ++
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F ++ ++V+S++ +SG +G + F +M R+ + +PN +T +
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRA-KVKPNGITFL 346
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 39 VATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
VAT LV Y++FG L SA +F+ + V+++V++NAF++ +Q G + + F M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 38 YVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
Y +L++ Y+R G L A KVFD++P RNVVSYNA S +N
Sbjct: 133 YANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRN 176
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ VT L A ++G + QVH + G+ + ++ +LV+ Y R G + A +V
Sbjct: 215 PDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQV 274
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTL 107
F + RNVVS+ A +SGL NG + + F +M++ F P TL
Sbjct: 275 FYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK-FGISPEEQTL 321
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ V +A +L A + +VH +LG+ D+ V ++L+ Y + G+L A +
Sbjct: 306 PDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSL 365
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
F +P +N+VS+N+ + GL +G F+ F +++
Sbjct: 366 FAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEIL 401
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H +KLG +DVY SL+ +Y G A +FD +P + VS+N+ + G ++ G
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+ +F+ M +N + T++S
Sbjct: 196 KMDIALTLFRKMAE--KNAISWTTMIS 220
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 2 PNSVTIATLLTA---RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
PN T ++L++ D G I + Q+H ++ + T+L+ Y + G L A
Sbjct: 219 PNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMAL 278
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+FD++ + V ++NA +S L NG P+ ++F +MM+S PN +TL++
Sbjct: 279 TIFDQIRDKKVCAWNAIISALASNGRPKQALEMF-EMMKSSYVHPNGITLLA 329
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
P+ +T ++A VG QVHCC K G +++YV ++L+ Y + + SA + +
Sbjct: 231 PSVLTACASVSACRVGV----QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLE 286
Query: 62 ELPVRNVVSYNAFMSGLLQNG 82
+ V +VVS+N+ + G ++ G
Sbjct: 287 GMEVDDVVSWNSMIVGCVRQG 307
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G V SLV YL+ + SA KVFDE+ R+V+S+N+ ++G + NG
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 83 APRLVFDVFKDMMRS 97
VF M+ S
Sbjct: 276 LAEKGLSVFVQMLVS 290
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 1 MPNSVTIATLLTAR--DVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
MP+S+ + L+ P VH + G + Y + Y + G +++A +
Sbjct: 1 MPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQ 60
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
+FD++P +N +++N + GL +NG D+F +M
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEM 96
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVP--QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+S+ + ++L A + P ++H + + G+L D + T+ V Y + G + A ++
Sbjct: 391 PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERI 450
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD R+ V YNA ++G +G F F+DM +P+ +T ++
Sbjct: 451 FDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG-GFKPDEITFMA 499
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 13 ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYN 72
A +VG + +H A KL V++D V+TS+ Y++ L SA +VFD+ +++ S+
Sbjct: 278 ALEVGKV----IHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWT 333
Query: 73 AFMSGLLQNGAPRLVFDVFKDMM 95
+ MSG +G R ++F D+M
Sbjct: 334 SAMSGYAMSGLTREARELF-DLM 355