Miyakogusa Predicted Gene

Lj0g3v0113489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0113489.1 Non Chatacterized Hit- tr|I3T039|I3T039_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,83.59,0,SUBFAMILY NOT NAMED,NULL; 5-FORMYLTETRAHYDROFOLATE
CYCLO-LIGASE-RELATED,NULL; no description,5-formy,CUFF.6599.1
         (360 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76730.1 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...   465   e-131

>AT1G76730.1 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr1:28803033-28804703 REVERSE
           LENGTH=354
          Length = 354

 Score =  465 bits (1197), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 223/268 (83%), Positives = 244/268 (91%)

Query: 92  DPKAWKWVIRKRIWDAMEAQNFAQNPRPVHHRIPNFVGANAAAEKMRGLDVFQVAQCVKV 151
           DPKAWKWVIRK++WD MEA+N+A +PRPVHHRIPNFVGA+AAA K+  LD F++A  VKV
Sbjct: 87  DPKAWKWVIRKKMWDLMEARNYAMSPRPVHHRIPNFVGASAAARKLAELDAFRMAMVVKV 146

Query: 152 NPDSPQKQVRFLTLSDGKKLLTPQPRLRTGFFSVLESDKLSIGTIKEACTSVGVAKHGRP 211
           NPDSPQKQ+RFLTLS  KKLLTPQPRLRTGFFSVLESD L   TI EACTSVGVAK+GR 
Sbjct: 147 NPDSPQKQIRFLTLSGEKKLLTPQPRLRTGFFSVLESDLLKPETIMEACTSVGVAKYGRA 206

Query: 212 IGLDEKIKVDLIVIGSVAVDPRTGARLGKGEGFAELEYGMLRYMGAIDDSTQVVTLVHDC 271
           IGLDEKIKVDLIVIGSVAV+P+TGARLGKGEGFAELEYGMLRYMGAIDDST VVT VHDC
Sbjct: 207 IGLDEKIKVDLIVIGSVAVNPQTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTTVHDC 266

Query: 272 QLVDDIPVEKLLIHDVPVDIICTPTQVIFTRTSIPKPQGIYWDKLSPEKLGQVRILRELK 331
           QLVDDIP+EKL IHDVPVDIICTPT+VIFT T IPKPQGIYWDKLSPEKL Q+RILRELK
Sbjct: 267 QLVDDIPLEKLAIHDVPVDIICTPTRVIFTNTPIPKPQGIYWDKLSPEKLRQIRILRELK 326

Query: 332 KRIERETGQKLPTGPSEKLPPTAQRSRR 359
            R+E++TG+KLPTGPSEKLPPTA+R RR
Sbjct: 327 NRLEKKTGRKLPTGPSEKLPPTAERKRR 354