Miyakogusa Predicted Gene

Lj0g3v0113449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0113449.1 Non Chatacterized Hit- tr|I3T5E9|I3T5E9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.6,0,HTH_CROC1,Helix-turn-helix type 3; no description,Lambda
repressor-like, DNA-binding domain; lambda ,CUFF.6770.1
         (143 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42680.1 | Symbols: MBF1A, ATMBF1A | multiprotein bridging fa...   245   7e-66
AT3G58680.1 | Symbols: MBF1B, ATMBF1B | multiprotein bridging fa...   244   2e-65
AT3G24500.1 | Symbols: MBF1C, ATMBF1C | multiprotein bridging fa...   142   7e-35
AT3G24500.2 | Symbols: MBF1C | multiprotein bridging factor 1C |...    72   1e-13

>AT2G42680.1 | Symbols: MBF1A, ATMBF1A | multiprotein bridging
           factor 1A | chr2:17774972-17776116 FORWARD LENGTH=142
          Length = 142

 Score =  245 bits (626), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 121/143 (84%), Positives = 133/143 (93%), Gaps = 1/143 (0%)

Query: 1   MSGAGGPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSG 60
           M+G G P++QDWEPVV+RKK   AAA++D+K VNAARR+GADIETVRK NAGTNKAASSG
Sbjct: 1   MAGIG-PITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSG 59

Query: 61  TSLNTKRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGK 120
           TSLNTK LD+DTENLTH+RVPTELKKAIMQAR DKKLTQ+QLAQIINEKPQVIQEYESGK
Sbjct: 60  TSLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGK 119

Query: 121 AIPNQQIIGKLERALGAKLRGKK 143
           AIPNQQI+ KLERALGAKLRGKK
Sbjct: 120 AIPNQQILSKLERALGAKLRGKK 142


>AT3G58680.1 | Symbols: MBF1B, ATMBF1B | multiprotein bridging
           factor 1B | chr3:21707367-21708625 FORWARD LENGTH=142
          Length = 142

 Score =  244 bits (622), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/143 (82%), Positives = 135/143 (94%), Gaps = 1/143 (0%)

Query: 1   MSGAGGPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSG 60
           M+G G P++QDWEPVV+RK+AP AAA++D+K VNAARR+GADIETVRK NAG+NKAASSG
Sbjct: 1   MAGIG-PITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSG 59

Query: 61  TSLNTKRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGK 120
           TSLNTK+LD+DTENL+HDRVPTELKKAIMQAR +KKLTQ+QLA +INEKPQVIQEYESGK
Sbjct: 60  TSLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGK 119

Query: 121 AIPNQQIIGKLERALGAKLRGKK 143
           AIPNQQI+ KLERALGAKLRGKK
Sbjct: 120 AIPNQQILSKLERALGAKLRGKK 142


>AT3G24500.1 | Symbols: MBF1C, ATMBF1C | multiprotein bridging
           factor 1C | chr3:8918755-8919201 FORWARD LENGTH=148
          Length = 148

 Score =  142 bits (358), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 72/139 (51%), Positives = 100/139 (71%), Gaps = 2/139 (1%)

Query: 6   GPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSGTS--L 63
           G V+QDWEPVVL K    +   +D KAVNAA R G  ++TV+K +AG+NK   S     +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 64  NTKRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIP 123
           NTK+L+E+TE    DRV  E++  I +AR++KK++QA LA+ INE+ QV+QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 124 NQQIIGKLERALGAKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145


>AT3G24500.2 | Symbols: MBF1C | multiprotein bridging factor 1C |
          chr3:8918755-8919169 FORWARD LENGTH=97
          Length = 97

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 2/89 (2%)

Query: 6  GPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSGT--SL 63
          G V+QDWEPVVL K    +   +D KAVNAA R G  ++TV+K +AG+NK   S     +
Sbjct: 7  GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 64 NTKRLDEDTENLTHDRVPTELKKAIMQAR 92
          NTK+L+E+TE    DRV  E++  + + R
Sbjct: 67 NTKKLEEETEPAAMDRVKAEVRLCLRRWR 95