Miyakogusa Predicted Gene
- Lj0g3v0112789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0112789.1 Non Chatacterized Hit- tr|B9GDN6|B9GDN6_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,26.67,3e-18,PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING
PROTEIN,NULL; FAMILY NOT NAMED,NULL; no description,Tetrat,CUFF.6547.1
(592 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 356 2e-98
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 3e-95
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 333 2e-91
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 8e-91
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 8e-90
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 1e-87
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 6e-87
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 315 5e-86
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 7e-86
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 315 8e-86
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 4e-84
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 6e-84
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 305 7e-83
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 9e-81
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 9e-81
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 7e-80
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 7e-80
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 293 3e-79
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 292 4e-79
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 292 5e-79
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 290 2e-78
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 8e-78
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 1e-76
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 283 3e-76
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 8e-76
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 8e-76
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 279 5e-75
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 5e-75
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 1e-74
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 1e-74
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 4e-74
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 275 8e-74
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 274 1e-73
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 274 1e-73
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 274 2e-73
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 272 5e-73
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 6e-73
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 271 1e-72
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 269 5e-72
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 8e-72
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 9e-72
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 9e-72
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 1e-71
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 266 4e-71
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 1e-70
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 262 6e-70
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 7e-70
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 1e-69
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 259 3e-69
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 259 4e-69
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 2e-68
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 253 2e-67
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 252 5e-67
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 7e-67
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 250 2e-66
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 249 3e-66
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 248 6e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 6e-66
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 248 1e-65
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 247 2e-65
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 7e-64
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 241 1e-63
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 239 6e-63
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 235 5e-62
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 9e-62
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 5e-61
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 8e-61
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 9e-61
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 228 7e-60
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 8e-59
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 9e-59
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 223 2e-58
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 3e-57
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 218 7e-57
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 9e-57
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 7e-56
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 2e-55
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 1e-54
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 5e-54
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 8e-53
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 5e-52
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 199 4e-51
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 1e-50
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 196 4e-50
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 6e-50
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 7e-50
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 192 5e-49
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 6e-48
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 8e-46
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 6e-40
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 6e-24
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 103 3e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 100 3e-21
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 94 2e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 90 4e-18
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 87 3e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 84 2e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 2e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 84 3e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 83 4e-16
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 82 1e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 6e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 79 7e-15
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 75 9e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 6e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 6e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 71 3e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 70 3e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 66 7e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 8e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 62 9e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 1e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 58 2e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 57 3e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 3e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 57 4e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 56 8e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 51 2e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 184/492 (37%), Positives = 288/492 (58%), Gaps = 11/492 (2%)
Query: 77 LFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL-PSGFTFSSVLNACGR 135
+F+ +P+ P ++W LI+ + S++ F +S RM ++G+ P +TF V+ C
Sbjct: 65 VFERVPS-PGTYLWNHLIKGY-SNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSN 122
Query: 136 VPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAM 195
+ G VHG +++ GF + +V T+ + Y K + AR VF M +R+ V+WTA+
Sbjct: 123 NGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTAL 182
Query: 196 ICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWV 255
+ Y K + EA+ +FD M ERN +W +V G GD+ AK+L+D M +D +++
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYT 242
Query: 256 AMIAGYGKLGNVTEARRLFD---GIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQA 312
+MI GY K G++ AR LF+ G+ D W+A++ YAQNG E ++F E+
Sbjct: 243 SMIDGYAKGGDMVSARDLFEEARGV----DVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 313 KIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD-RTLIVSNALINMHSKCGNIDL 371
+K E MVG +SAC+Q+ + + ++ + + V ALI+M++KCG++D
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDR 358
Query: 372 AWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSS 431
A + F M RD+ +Y +M+ A HG +AI LF +M EG+ P++V F +L C
Sbjct: 359 AAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQ 418
Query: 432 SGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWG 491
S LVEEG R+F++M + I P+HY+CIV+LL R G+L+ AY LIK A A+ WG
Sbjct: 419 SRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWG 478
Query: 492 SLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKG 551
SLL C +HGN E+ E ARHL E++P+ +G+YVLL+N+YA+ D+W ++ M++ G
Sbjct: 479 SLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENG 538
Query: 552 IKKPSGYSWIQR 563
I K G SWI R
Sbjct: 539 ITKICGRSWISR 550
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 288/490 (58%), Gaps = 13/490 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A +FD MP D W +L+ A++ + C+ +R + + V +++ +L
Sbjct: 176 ARSVFDRMPEKNDV-SWNALLSAYVQNSKMEEACMLFKSRENWALV-----SWNCLLGGF 229
Query: 134 GRVPAMVEGKQVHGRL-VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
+ +VE +Q + V+ N I+ YA+SG + +AR +FD +DV W
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITG-----YAQSGKIDEARQLFDESPVQDVFTW 284
Query: 193 TAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGV 252
TAM+ GY + M+ EAR LFD M ERN +W M+AGY M+ AKEL+DVM ++
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS 344
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQA 312
TW MI GY + G ++EA+ LFD +P +D +WAAM+A Y+Q+G++ E + +F ++ +
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 313 KIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLA 372
++ + A+S CA + + + L + +G + V NAL+ M+ KCG+I+ A
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA 463
Query: 373 WREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS 432
F M +D+ +++ MI ++ HG + A+ F M +EGLKP+ T + VL+ACS +
Sbjct: 464 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 433 GLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGS 492
GLV++G ++F MT + + P +HYAC+VDLLGRAG LE A++L+K DA WG+
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 493 LLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGI 552
LL A RVHGN EL ETAA + ++PE+SG YVLL+N+YAS +W ++ M KG+
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 553 KKPSGYSWIQ 562
KK GYSWI+
Sbjct: 644 KKVPGYSWIE 653
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 195/439 (44%), Gaps = 91/439 (20%)
Query: 162 TALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSF 221
++ Y ++G AR +FD M +RD+V+W MI GY + + +AR LF+ M ER+
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 222 TWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIA---------------------- 259
+W TM++GYA G + A+ ++D M +K+ V+W A+++
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 260 ---------GYGKLGNVTEARRLFDGIPVP------------------------------ 280
G+ K + EAR+ FD + V
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL 340
QD TW AM++ Y QN +E E+F ++ + EV+ ++ Q + M+ L
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKEL 334
Query: 341 TDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKS 400
D + C R + N +I +++CG I A F M RD +++AMI +++ G S
Sbjct: 335 FDVMP--C--RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 401 QDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF-QIMTGVFDIEPLPEHYA 459
+A+ LF +M +EG + N+ +F L+ C+ +E G + +++ G ++
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET-------G 443
Query: 460 CIVD-----LLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLL 514
C V + + G +E A L KE A D +W +++A HG GE A R
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHG---FGEVALRFFE 499
Query: 515 E-----IDPEDSGTYVLLA 528
+ P+D+ +L+
Sbjct: 500 SMKREGLKPDDATMVAVLS 518
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 25/266 (9%)
Query: 186 DRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDV 245
D D+ W I Y + EA +F M +S ++ M++GY G+ + A++L+D
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 246 MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
M ++D V+W MI GY + N+ +AR LF+ +P +D +W ML+ YAQNG + +
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIMP-ERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC------DRTLIVSNAL 359
F + + +V+ +SA Q +EE C + L+ N L
Sbjct: 180 FDRMPEK----NDVSWNALLSAYVQ----------NSKMEEACMLFKSRENWALVSWNCL 225
Query: 360 INMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
+ K I A + F +M RD+ +++ +IT +A+ GK +A LF P + +
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV---- 281
Query: 420 VTFIGVLNACSSSGLVEEGCRFFQIM 445
T+ +++ + +VEE F M
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKM 307
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 298/516 (57%), Gaps = 14/516 (2%)
Query: 57 LLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQ 116
L+ ++++ SS +I +A ++FD +P P F W ++IR + S HF+ + Y+ M
Sbjct: 55 LITKLIHASSSFGDITFARQVFDDLPR-PQIFPWNAIIRGY-SRNNHFQDALLMYSNMQL 112
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
+ V P FTF +L AC + + G+ VH ++ + GF + VQ L+ +YAK +
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 177 ARDVFDGMD--DRDVVAWTAMICGYAKVAMMVEARWLFDNMGERN-SFTWTTMVA---GY 230
AR VF+G+ +R +V+WTA++ YA+ +EA +F M + + W +V+ +
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 231 ASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTW 286
D+K + ++ + + + +++ Y K G V A+ LFD + P + W
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP-NLILW 291
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEE 346
AM++ YA+NGYA+E I+MF E+ ++ +++ AISACAQ+ + + ++ +++
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 347 GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDL 406
+ +S+ALI+M +KCG+++ A F RD+ +SAMI + HG++++AI L
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 407 FFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLG 466
+ M + G+ PN VTF+G+L AC+ SG+V EG FF M I P +HYAC++DLLG
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLG 470
Query: 467 RAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVL 526
RAG L++AY +IK T WG+LL+AC+ H +VELGE AA+ L IDP ++G YV
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQ 530
Query: 527 LANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
L+N+YA+ W V+ M +KG+ K G SW++
Sbjct: 531 LSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 202/404 (50%), Gaps = 15/404 (3%)
Query: 107 CISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLG 166
C+++ SG+ F S + +A + + KQ+H RL+ G + + T L+
Sbjct: 6 CLASPLLYTNSGIHSDSFYASLIDSATHKA----QLKQIHARLLVLGLQFSGFLITKLIH 61
Query: 167 MYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFT 222
+ G + AR VFD + + W A+I GY++ +A ++ NM +SFT
Sbjct: 62 ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFT 121
Query: 223 WTTMVAGYASCGDMKAAK----ELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIP 278
+ ++ + ++ + +++ + D D +IA Y K + AR +F+G+P
Sbjct: 122 FPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP 181
Query: 279 VPQDA-STWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMS 337
+P+ +W A+++ YAQNG E +E+F ++R+ +K VA+V ++A L+D++
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 338 NALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEH 397
++ + + + + +L M++KCG + A F M+ ++ ++AMI+ +A++
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 398 GKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH 457
G +++AID+F M + ++P+ ++ ++AC+ G +E+ ++ + G D
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV-GRSDYRDDVFI 360
Query: 458 YACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
+ ++D+ + G +E A L+ + D W +++ +HG
Sbjct: 361 SSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLHG 403
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 331 bits (849), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 303/548 (55%), Gaps = 39/548 (7%)
Query: 50 YHHFLSPLLLRVLNFSSEKSN--ICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHC 107
Y+H L+ + L+F+ E S + Y ++ N D+F W L+R FLS F+
Sbjct: 31 YNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGF-NGHDSFSWGCLVR-FLSQHRKFKET 88
Query: 108 ISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGM 167
+ Y MH SG+ PS +SVL ACG++ MV+GK +H + +++G G VQT L+G+
Sbjct: 89 VDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGL 148
Query: 168 YAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWT--- 224
Y++ G + A+ FD + +++ V+W +++ GY + + EAR +FD + E+++ +W
Sbjct: 149 YSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLII 208
Query: 225 ----------------------------TMVAGYASCGDMKAAKELYDVMSDKDGVTWVA 256
++ GY +C +MK A+ +D M K+GV+W+
Sbjct: 209 SSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWIT 268
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV--RQAKI 314
MI+GY KLG+V A LF + +D + AM+ACY QNG K+ +++F ++ R + I
Sbjct: 269 MISGYTKLGDVQSAEELFR-LMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYI 327
Query: 315 KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWR 374
+ E+ + +SA +QL + + +I E ++S +LI+++ K G+ A++
Sbjct: 328 QPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFK 387
Query: 375 EFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGL 434
FS + +D +YSAMI +G + +A LF M ++ + PN VTF G+L+A S SGL
Sbjct: 388 MFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGL 447
Query: 435 VEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLL 494
V+EG + F M ++EP +HY +VD+LGRAG+LE AY LIK +A WG+LL
Sbjct: 448 VQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALL 506
Query: 495 AACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKK 554
A +H NVE GE A H ++++ + +G LA +Y+S +W A V+ + +K + K
Sbjct: 507 LASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCK 566
Query: 555 PSGYSWIQ 562
G SW++
Sbjct: 567 TLGCSWVE 574
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 295/514 (57%), Gaps = 8/514 (1%)
Query: 54 LSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYAR 113
++P L+ L+ + + A ++F+ + P+ + SLIRA + ++ ++
Sbjct: 53 IAPKLISALSLCRQTN---LAVRVFNQVQE-PNVHLCNSLIRAHAQNSQPYQ-AFFVFSE 107
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
M + G+ FT+ +L AC + K +H + + G + V AL+ Y++ G
Sbjct: 108 MQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGG 167
Query: 174 --VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYA 231
V DA +F+ M +RD V+W +M+ G K + +AR LFD M +R+ +W TM+ GYA
Sbjct: 168 LGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYA 227
Query: 232 SCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVP-QDASTWAAML 290
C +M A EL++ M +++ V+W M+ GY K G++ AR +FD +P+P ++ TW ++
Sbjct: 228 RCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
A YA+ G KE + ++ + +K A++ ++AC + + + + ++
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
V NAL++M++KCGN+ A+ F+ + +D+ +++ M+ HG ++AI+LF RM
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Query: 411 PKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQ 470
+EG++P++VTFI VL +C+ +GL++EG +F M V+D+ P EHY C+VDLLGR G+
Sbjct: 408 RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 471 LERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANM 530
L+ A +++ + WG+LL ACR+H V++ + +L+++DP D G Y LL+N+
Sbjct: 468 LKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNI 527
Query: 531 YASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
YA+ + W G ++ M G++KPSG S ++ E
Sbjct: 528 YAAAEDWEGVADIRSKMKSMGVEKPSGASSVELE 561
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 328 bits (840), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 285/530 (53%), Gaps = 41/530 (7%)
Query: 73 YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNA 132
YA +F ++P+ P++ ++ +R LS + R I Y R+ G F+F +L A
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRD-LSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKA 120
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
+V A+ EG ++HG + + V+T + MYA G + AR+VFD M RDVV W
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 193 TAMICGYAKVAMMVEARWLFDNMGERN--------------------------------- 219
MI Y + ++ EA LF+ M + N
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 220 ------SFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRL 273
+ T +V YA G M A+E + MS ++ AM++GY K G + +A+ +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 274 FDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRD 333
FD +D W M++ Y ++ Y +E + +F+E+ + IK V+M ISACA L
Sbjct: 301 FDQTE-KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 334 IRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITA 393
+ + + I + L ++NALINM++KCG +D F M R++ ++S+MI A
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA 419
Query: 394 FAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEP 453
+ HG++ DA+ LF RM +E ++PN+VTF+GVL CS SGLVEEG + F MT ++I P
Sbjct: 420 LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITP 479
Query: 454 LPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHL 513
EHY C+VDL GRA L A +I+ +++ WGSL++ACR+HG +ELG+ AA+ +
Sbjct: 480 KLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRI 539
Query: 514 LEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQR 563
LE++P+ G VL++N+YA + +W ++++M +K + K G S I +
Sbjct: 540 LELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQ 589
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 42/299 (14%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVL 130
I YA +FD M + D W ++I + + M S V+P +++
Sbjct: 162 INYARNVFDEMSH-RDVVTWNTMIERYCRF-GLVDEAFKLFEEMKDSNVMPDEMILCNIV 219
Query: 131 NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
+ACGR M + ++ L+++ + + TAL+ MYA +GC+ AR+ F M R++
Sbjct: 220 SACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF 279
Query: 191 AWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK- 249
TAM+ GY+K + +A+ +FD +++ WTTM++ Y + A +++ M
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 250 ---------------------DGVTWV-----------------AMIAGYGKLGNVTEAR 271
D WV A+I Y K G + R
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 272 RLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQ 330
+F+ +P ++ +W++M+ + +G A + + +F ++Q ++ EV VG + C+
Sbjct: 400 DVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH 457
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/536 (34%), Positives = 286/536 (53%), Gaps = 51/536 (9%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A LF +MP D W S++ F H + +A MH+ G + + ++F+SVL+AC
Sbjct: 105 ADSLFRSMPE-RDQCTWNSMVSGFAQHD-RCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ M +G QVH + +S F + + +AL+ MY+K G V DA+ VFD M DR+VV+W
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN 222
Query: 194 AMICGYAKVAMMVEARWLFDNMGE------------------------------------ 217
++I + + VEA +F M E
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 218 ---RNSFTWTT-MVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRL 273
RN + V YA C +K A+ ++D M ++ + +MI+GY + AR +
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342
Query: 274 FDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRD 333
F + ++ +W A++A Y QNG +E + +F +++ + T + + ACA L +
Sbjct: 343 FTKM-AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 334 IRMSNALTDHI-------EEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYT 386
+ + H+ + G D + V N+LI+M+ KCG ++ + F M RD +
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEED-DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 387 YSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMT 446
++AMI FA++G +A++LF M + G KP+ +T IGVL+AC +G VEEG +F MT
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 447 GVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELG 506
F + PL +HY C+VDLLGRAG LE A S+I+E D+ WGSLLAAC+VH N+ LG
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLG 580
Query: 507 ETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+ A LLE++P +SG YVLL+NMYA KW V+K M K+G+ K G SWI+
Sbjct: 581 KYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 214/467 (45%), Gaps = 79/467 (16%)
Query: 126 FSSVLNACGRVP-AMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
F+ +L++C + + + + VH +++SGF +Q L+ Y+K G + D R VFD M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYAS------------ 232
R++ W +++ G K+ + EA LF +M ER+ TW +MV+G+A
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 233 -----------------------CGDMKAAKELYDVMSDKDGVTWV----AMIAGYGKLG 265
DM +++ +++ ++ V A++ Y K G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 266 NVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAI 325
NV +A+R+FD + ++ +W +++ C+ QNG A E +++F+ + +++++ EV + I
Sbjct: 202 NVNDAQRVFDEMG-DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 326 SACAQLRDIRMSNALTDHIEEGCCDRT-LIVSNALINMHSKCGNIDLAWREFSTMRCRD- 383
SACA L I++ + + + R +I+SNA ++M++KC I A F +M R+
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 384 ---------------------MYT---------YSAMITAFAEHGKSQDAIDLFFRMPKE 413
M+T ++A+I + ++G++++A+ LF + +E
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 414 GLKPNQVTFIGVLNACSSSGLVEEGCR-FFQIMTGVFDIEPLPEHYA----CIVDLLGRA 468
+ P +F +L AC+ + G + ++ F + E ++D+ +
Sbjct: 381 SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKC 440
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE 515
G +E Y L+ D +W +++ +G R +LE
Sbjct: 441 GCVEEGY-LVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 318 bits (815), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 281/497 (56%), Gaps = 22/497 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSG-----VLPSGFTFSS 128
A K+FD MP + WT+L++ ++ H S + +M + V+ GF
Sbjct: 98 ARKVFDLMPE-RNVVSWTALVKGYV-HNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDG 155
Query: 129 VLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD 188
++ ++ M+ K + I +T+++ K G V +AR++FD M +R
Sbjct: 156 RIDDACKLYEMIPDK-------------DNIARTSMIHGLCKEGRVDEAREIFDEMSERS 202
Query: 189 VVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSD 248
V+ WT M+ GY + + +AR +FD M E+ +WT+M+ GY G ++ A+EL++VM
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV 262
Query: 249 KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE 308
K + AMI+G G+ G + +ARR+FD + DAS W ++ + +NG+ E +++F
Sbjct: 263 KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDAS-WQTVIKIHERNGFELEALDLFIL 321
Query: 309 VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGN 368
+++ ++ T ++ +S CA L + + + D + V++ L+ M+ KCG
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 369 IDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG-LKPNQVTFIGVLN 427
+ + F +D+ ++++I+ +A HG ++A+ +F MP G KPN+VTF+ L+
Sbjct: 382 LVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441
Query: 428 ACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADA 487
ACS +G+VEEG + ++ M VF ++P+ HYAC+VD+LGRAG+ A +I DA
Sbjct: 442 ACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDA 501
Query: 488 TTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLM 547
WGSLL ACR H +++ E A+ L+EI+PE+SGTY+LL+NMYASQ +W ++KLM
Sbjct: 502 AVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLM 561
Query: 548 SKKGIKKPSGYSWIQRE 564
+ ++K G SW + E
Sbjct: 562 KTRLVRKSPGCSWTEVE 578
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 183/361 (50%), Gaps = 16/361 (4%)
Query: 157 NKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG 216
N I L+ Y K+G + +AR VFD M +R+VV+WTA++ GY + A LF M
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 217 ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDG 276
E+N +WT M+ G+ G + A +LY+++ DKD + +MI G K G V EAR +FD
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDE 197
Query: 277 IPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRM 336
+ + TW M+ Y QN + ++F +V K +++ +M+ ++ D
Sbjct: 198 MS-ERSVITWTTMVTGYGQNNRVDDARKIF-DVMPEKTEVSWTSMLMGYVQNGRIED--- 252
Query: 337 SNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAE 396
+ + E + +I NA+I+ + G I A R F +M+ R+ ++ +I
Sbjct: 253 ----AEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER 308
Query: 397 HGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF-QIMTGVFDIEPLP 455
+G +A+DLF M K+G++P T I +L+ C+S + G + Q++ FD++
Sbjct: 309 NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV 368
Query: 456 EHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE 515
+ ++ + + G+L ++ LI + S D W S+++ HG LGE A + E
Sbjct: 369 A--SVLMTMYIKCGELVKS-KLIFDRFPSKDIIMWNSIISGYASHG---LGEEALKVFCE 422
Query: 516 I 516
+
Sbjct: 423 M 423
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 112/264 (42%), Gaps = 54/264 (20%)
Query: 258 IAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKIT 317
I ++G + EAR+LFD + S+W +M+A Y N ++ ++F E+
Sbjct: 24 ITHLSRIGKIHEARKLFDSCD-SKSISSWNSMVAGYFANLMPRDARKLFDEMP------- 75
Query: 318 EVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFS 377
DR +I N L++ + K G ID A + F
Sbjct: 76 --------------------------------DRNIISWNGLVSGYMKNGEIDEARKVFD 103
Query: 378 TMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEE 437
M R++ +++A++ + +GK A LF++MP++ V IG L G +++
Sbjct: 104 LMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQ----DGRIDD 159
Query: 438 GCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAAC 497
C+ ++++ +I ++ L + G+++ A + E + TW +++
Sbjct: 160 ACKLYEMIPDKDNIA-----RTSMIHGLCKEGRVDEAREIFDE-MSERSVITWTTMVTGY 213
Query: 498 RVHGNVELGETAARHLLEIDPEDS 521
+ V+ AR + ++ PE +
Sbjct: 214 GQNNRVD----DARKIFDVMPEKT 233
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 278/530 (52%), Gaps = 42/530 (7%)
Query: 73 YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNA 132
YA K+FD +P P++F W +LIRA+ S + + +S P+ +TF ++ A
Sbjct: 82 YARKVFDEIPK-PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
V ++ G+ +HG V+S G + V +L+ Y G + A VF + ++DVV+W
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSW 200
Query: 193 TAMICGYAKVAMMVEARWLFDNMG----------------------------------ER 218
+MI G+ + +A LF M E
Sbjct: 201 NSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260
Query: 219 NSFTWTTMVAG-----YASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRL 273
N +A Y CG ++ AK L+D M +KD VTW M+ GY + AR +
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 274 FDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVR-QAKIKITEVAMVGAISACAQLR 332
+ +P +D W A+++ Y QNG E + +F E++ Q +K+ ++ +V +SACAQ+
Sbjct: 321 LNSMP-QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMIT 392
+ + + +I++ V++ALI+M+SKCG+++ + F+++ RD++ +SAMI
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 393 AFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIE 452
A HG +A+D+F++M + +KPN VTF V ACS +GLV+E F M + I
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 453 PLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARH 512
P +HYACIVD+LGR+G LE+A I+ + WG+LL AC++H N+ L E A
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTR 559
Query: 513 LLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
LLE++P + G +VLL+N+YA KW ++K M G+KK G S I+
Sbjct: 560 LLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 609
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 14/277 (5%)
Query: 247 SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMF 306
SD + + +A ++ AR++FD IP P ++ W ++ YA I F
Sbjct: 60 SDPYSASKLFAMAALSSFASLEYARKVFDEIPKP-NSFAWNTLIRAYASGPDPVLSIWAF 118
Query: 307 KE-VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
+ V +++ + I A A++ + + +L + + V+N+LI+ +
Sbjct: 119 LDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFS 178
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
CG++D A + F+T++ +D+ ++++MI F + G A++LF +M E +K + VT +GV
Sbjct: 179 CGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGV 238
Query: 426 LNACSSSGLVEEG---CRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
L+AC+ +E G C + + ++ ++D+ + G +E A L +
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKRLF-DAM 293
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLEIDPE 519
D TW ++L + + E AAR +L P+
Sbjct: 294 EEKDNVTWTTMLDGYAISEDYE----AAREVLNSMPQ 326
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 315 bits (806), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 180/497 (36%), Positives = 272/497 (54%), Gaps = 40/497 (8%)
Query: 73 YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNA 132
YAHKLFD +P PD I ++R + +S Y M + GV P +TF+ VL A
Sbjct: 64 YAHKLFDEIPK-PDVSICNHVLRGS-AQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA 121
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
C ++ G HG++V+ GF N+ V+ AL+ +A G + A +
Sbjct: 122 CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASE------------- 168
Query: 193 TAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGV 252
LFD+ + + W++M +GYA G + A L+D M KD V
Sbjct: 169 ------------------LFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 210
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQA 312
W MI G K + AR LFD +D TW AM++ Y GY KE + +FKE+R A
Sbjct: 211 AWNVMITGCLKCKEMDSARELFDRF-TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDA 269
Query: 313 KIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLI-----VSNALINMHSKCG 367
V ++ +SACA L D+ L +I E + I + NALI+M++KCG
Sbjct: 270 GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCG 329
Query: 368 NIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN 427
+ID A F ++ RD+ T++ +I A H ++ +I++F M + + PN+VTFIGV+
Sbjct: 330 SIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVIL 388
Query: 428 ACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADA 487
ACS SG V+EG ++F +M +++IEP +HY C+VD+LGRAGQLE A+ ++ +A
Sbjct: 389 ACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNA 448
Query: 488 TTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLM 547
W +LL AC+++GNVELG+ A LL + ++SG YVLL+N+YAS +W G + V+K+
Sbjct: 449 IVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMF 508
Query: 548 SKKGIKKPSGYSWIQRE 564
+KKP+G S I+ +
Sbjct: 509 DDTRVKKPTGVSLIEED 525
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 279/516 (54%), Gaps = 45/516 (8%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
D F+W ++I++ SH R + M ++GV F+ S VL AC R+ + G Q+
Sbjct: 85 DPFLWNAVIKSH-SHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
HG L ++G + +Q L+G+Y K GC+ +R +FD M RD V++ +MI GY K ++
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 206 VEARWLFD----------------------------------NMGERNSFTWTTMVAGYA 231
V AR LFD +M E++ +W +M+ GY
Sbjct: 204 VSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYV 263
Query: 232 SCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
G ++ AK L+DVM +D VTW MI GY KLG V A+ LFD +P +D + +M+A
Sbjct: 264 KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP-HRDVVAYNSMMA 322
Query: 292 CYAQNGYAKEGIEMFKEV-RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
Y QN Y E +E+F ++ +++ + + +V + A AQL R+S A+ H+ +
Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG--RLSKAIDMHLY--IVE 378
Query: 351 RTLIVSN----ALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDL 406
+ + ALI+M+SKCG+I A F + + + ++AMI A HG + A D+
Sbjct: 379 KQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDM 438
Query: 407 FFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLG 466
++ + LKP+ +TF+GVLNACS SGLV+EG F++M IEP +HY C+VD+L
Sbjct: 439 LLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILS 498
Query: 467 RAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVL 526
R+G +E A +LI+E + W + L AC H E GE A+HL+ + +YVL
Sbjct: 499 RSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVL 558
Query: 527 LANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
L+NMYAS W V+ +M ++ I+K G SWI+
Sbjct: 559 LSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIE 594
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 197/464 (42%), Gaps = 91/464 (19%)
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKS---------GCVC 175
+ SS ++ G + Q+HGRL+++G N + T ++ +A S CV
Sbjct: 11 SISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF 70
Query: 176 DARDV--FDGMDDRDVVAWTAMI------------------------------------- 196
V F + D W A+I
Sbjct: 71 HEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKA 130
Query: 197 ---CGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVT 253
G+ K M + +L + F ++ Y CG + +++++D M +D V+
Sbjct: 131 CSRLGFVKGGMQIHG-FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVS 189
Query: 254 WVAMIAGYGKLGNVTEARRLFDGIPVP-QDASTWAAMLACYAQNGYAKEGIE----MFKE 308
+ +MI GY K G + AR LFD +P+ ++ +W +M++ YAQ +G++ +F +
Sbjct: 190 YNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS---DGVDIASKLFAD 246
Query: 309 VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGN 368
+ + + I+ +M+ ++ D + L D + R ++ +I+ ++K G
Sbjct: 247 MPEKDL-ISWNSMIDGYVKHGRIED---AKGLFDVMPR----RDVVTWATMIDGYAKLGF 298
Query: 369 IDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG-LKPNQVTFIGVLN 427
+ A F M RD+ Y++M+ + ++ +A+++F M KE L P+ T + VL
Sbjct: 299 VHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLP 358
Query: 428 ACSSSGLVEEGCRFFQIMTGVFDIEPLPEHY------ACIVDLLGRAGQLERAYSLIKEN 481
A + G + + I ++ +E + Y ++D+ + G ++ A L+ E
Sbjct: 359 AIAQLGRLSKA-----IDMHLYIVE--KQFYLGGKLGVALIDMYSKCGSIQHAM-LVFEG 410
Query: 482 ATSADATTWGSLLAACRVHGNVELGETAARHLLEID-----PED 520
+ W +++ +HG LGE+A LL+I+ P+D
Sbjct: 411 IENKSIDHWNAMIGGLAIHG---LGESAFDMLLQIERLSLKPDD 451
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 19/234 (8%)
Query: 73 YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMH-QSGVLPSGFTFSSVLN 131
+A LFD MP+ D + S++ ++ ++ H + ++ M +S +LP T VL
Sbjct: 301 HAKTLFDQMPH-RDVVAYNSMMAGYVQNKYHME-ALEIFSDMEKESHLLPDDTTLVIVLP 358
Query: 132 ACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVA 191
A ++ + + +H +V+ F + AL+ MY+K G + A VF+G++++ +
Sbjct: 359 AIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH 418
Query: 192 WTAMICGYAKVAMMVEARWLFDNMG--ERNSF-----TWTTMVAGYASCGDMKAAKELYD 244
W AMI G A + A FD + ER S T+ ++ + G +K ++
Sbjct: 419 WNAMIGGLAIHGLGESA---FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFE 475
Query: 245 VMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML-AC 292
+M K + + M+ + G++ A+ L + +PV + W L AC
Sbjct: 476 LMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTAC 529
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 286/534 (53%), Gaps = 45/534 (8%)
Query: 70 NICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSV 129
++ YA+KLF +P PD +W ++I+ + S + Y M + GV P TF +
Sbjct: 83 HVSYAYKLFVKIPE-PDVVVWNNMIKGW-SKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 130 LNACGRVP-AMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD 188
LN R A+ GK++H +V+ G G N VQ AL+ MY+ G + AR VFD D
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 189 VVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTT----------------------- 225
V +W MI GY ++ E+ L M ERN + T+
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 226 -----------------MVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVT 268
+V YA+CG+M A ++ M +D ++W +++ GY + GN+
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLK 319
Query: 269 EARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISAC 328
AR FD +PV +D +W M+ Y + G E +E+F+E++ A + E MV ++AC
Sbjct: 320 LARTYFDQMPV-RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 329 AQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYS 388
A L + + + +I++ ++V NALI+M+ KCG + A + F M RD +T++
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWT 438
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV 448
AM+ A +G+ Q+AI +FF+M ++P+ +T++GVL+AC+ SG+V++ +FF M
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 449 FDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGET 508
IEP HY C+VD+LGRAG ++ AY ++++ + ++ WG+LL A R+H + + E
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAEL 558
Query: 509 AARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
AA+ +LE++P++ Y LL N+YA +W V++ + IKK G+S I+
Sbjct: 559 AAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 191/445 (42%), Gaps = 62/445 (13%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK--SGCVCDARDVFDG 183
F S+L C KQ+H + + G N Q L + G V A +F
Sbjct: 37 FISILGVCKTTDQF---KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVK 93
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAA 239
+ + DVV W MI G++KV E L+ NM + +S T+ ++ G G A
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 240 KELYDVMSDKDGV-----TWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYA 294
+ K G+ A++ Y G + AR +FD +D +W M++ Y
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR-RCKEDVFSWNLMISGYN 212
Query: 295 QNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLI 354
+ +E IE+ E+ + + T V ++ +SAC++++D + + +++ E + +L
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 355 VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQ------------- 401
+ NAL+N ++ CG +D+A R F +M+ RD+ ++++++ + E G +
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 402 ------------------DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQ 443
+++++F M G+ P++ T + VL AC+ G +E G +
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG----E 388
Query: 444 IMTGVFDIEPLPEHYAC---IVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVH 500
+ D + ++D+ + G E+A + + D TW +++ +
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF-HDMDQRDKFTWTAMVVGLANN 447
Query: 501 GNVELGETAARHLLE-----IDPED 520
G G+ A + + I P+D
Sbjct: 448 GQ---GQEAIKVFFQMQDMSIQPDD 469
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 42/293 (14%)
Query: 67 EKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTF 126
E+ N+ A FD MP D WT +I +L F + + M +G++P FT
Sbjct: 314 ERGNLKLARTYFDQMP-VRDRISWTIMIDGYL-RAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 127 SSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDD 186
SVL AC + ++ G+ + + ++ + +V AL+ MY K GC A+ VF MD
Sbjct: 372 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ 431
Query: 187 RDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKEL 242
RD WTAM+ G A EA +F M + + T+ +++ G + A++
Sbjct: 432 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF 491
Query: 243 YDVMS-----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML------- 290
+ M + V + M+ G+ G V EA + +P+ ++ W A+L
Sbjct: 492 FAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN 551
Query: 291 --------------------ACYAQ--NGYAKEGIEMFKEVRQAKIKITEVAM 321
A YA N YA G + +K++R+ + KI +VA+
Sbjct: 552 DEPMAELAAKKILELEPDNGAVYALLCNIYA--GCKRWKDLREVRRKIVDVAI 602
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 177/526 (33%), Positives = 291/526 (55%), Gaps = 20/526 (3%)
Query: 51 HH--FLSPLLL-RVLNFSSEK-SNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRH 106
HH FL LLL R L F K S + ++H F P+ F++ SLI F+++ F
Sbjct: 42 HHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQF------PNIFLYNSLINGFVNNHL-FHE 94
Query: 107 CISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLG 166
+ + + + G+ GFTF VL AC R + G +H +V+ GF + T+LL
Sbjct: 95 TLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLS 154
Query: 167 MYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFT 222
+Y+ SG + DA +FD + DR VV WTA+ GY EA LF M E +S+
Sbjct: 155 IYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYF 214
Query: 223 WTTMVAGYASCGDMKAAKELYDVMSD----KDGVTWVAMIAGYGKLGNVTEARRLFDGIP 278
+++ GD+ + + + M + K+ ++ Y K G + +AR +FD +
Sbjct: 215 IVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM- 273
Query: 279 VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSN 338
V +D TW+ M+ YA N + KEGIE+F ++ Q +K + ++VG +S+CA L + +
Sbjct: 274 VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGE 333
Query: 339 ALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHG 398
I+ L ++NALI+M++KCG + + F M+ +D+ +A I+ A++G
Sbjct: 334 WGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNG 393
Query: 399 KSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHY 458
+ + +F + K G+ P+ TF+G+L C +GL+++G RFF ++ V+ ++ EHY
Sbjct: 394 HVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHY 453
Query: 459 ACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDP 518
C+VDL GRAG L+ AY LI + +A WG+LL+ CR+ + +L ET + L+ ++P
Sbjct: 454 GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEP 513
Query: 519 EDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
++G YV L+N+Y+ +W A V+ +M+KKG+KK GYSWI+ E
Sbjct: 514 WNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELE 559
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 280/492 (56%), Gaps = 11/492 (2%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVL 130
I A +F+ MP + WT++++ ++ S + RM + + F ++
Sbjct: 95 IVEARNVFELMPE-RNVVSWTAMVKGYM-QEGMVGEAESLFWRMPERNEVSWTVMFGGLI 152
Query: 131 NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
+ GR+ + ++++ + + + T ++G + G V +AR +FD M +R+VV
Sbjct: 153 DD-GRID---KARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVV 204
Query: 191 AWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKD 250
WT MI GY + + AR LF+ M E+ +WT+M+ GY G ++ A+E ++VM K
Sbjct: 205 TWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKP 264
Query: 251 GVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVR 310
+ AMI G+G++G +++ARR+FD + +D +TW M+ Y + G+ E +++F +++
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 311 QAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNID 370
+ ++ + +++ +S CA L ++ + H+ D + V++ L+ M+ KCG +
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 371 LAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACS 430
A F +D+ ++++I+ +A HG ++A+ +F MP G PN+VT I +L ACS
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 431 SSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTW 490
+G +EEG F+ M F + P EHY+C VD+LGRAGQ+++A LI+ DAT W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 491 GSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKK 550
G+LL AC+ H ++L E AA+ L E +P+++GTYVLL+++ AS+ KW VV+K M
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
Query: 551 GIKKPSGYSWIQ 562
+ K G SWI+
Sbjct: 564 NVSKFPGCSWIE 575
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 186/368 (50%), Gaps = 18/368 (4%)
Query: 157 NKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG 216
N + L+ Y K+ + +AR+VF+ M +R+VV+WTAM+ GY + M+ EA LF M
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 217 ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDG 276
ERN +WT M G G + A++LYD+M KD V MI G + G V EAR +FD
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 277 IPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRM 336
+ ++ TW M+ Y QN ++F EV K +++ +M+ + ++ D
Sbjct: 198 MR-ERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEKTEVSWTSMLLGYTLSGRIED--- 252
Query: 337 SNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAE 396
+ E + +I NA+I + G I A R F M RD T+ MI A+
Sbjct: 253 ----AEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYER 308
Query: 397 HGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF-QIMTGVFDIEPLP 455
G +A+DLF +M K+G++P+ + I +L+ C++ ++ G + ++ FD +
Sbjct: 309 KGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYV 368
Query: 456 EHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE 515
+ ++ + + G+L +A L+ + +S D W S+++ HG LGE A + E
Sbjct: 369 A--SVLMTMYVKCGELVKA-KLVFDRFSSKDIIMWNSIISGYASHG---LGEEALKIFHE 422
Query: 516 IDPEDSGT 523
+ SGT
Sbjct: 423 M--PSSGT 428
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 305 bits (780), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 294/535 (54%), Gaps = 52/535 (9%)
Query: 73 YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNA 132
YA +F T+ P+ IW ++ R + + + Y M G+LP+ +TF VL +
Sbjct: 86 YAISVFKTIQE-PNLLIWNTMFRGH-ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
C + A EG+Q+HG +++ G + V T+L+ MY ++G + DA VFD RDVV++
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 193 TAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELY------DVM 246
TA+I GYA + A+ LFD + ++ +W M++GYA G+ K A EL+ +V
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 247 SDKDGVT--------------------WV-------------AMIAGYGKLGNVTEARRL 273
D+ + W+ A+I Y K G + A L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 274 FDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRD 333
F+ +P +D +W ++ Y KE + +F+E+ ++ +V M+ + ACA L
Sbjct: 324 FERLPY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 334 IRMSNALTDHIEEGCCDRTLIVSNA------LINMHSKCGNIDLAWREFSTMRCRDMYTY 387
I + + +I++ R V+NA LI+M++KCG+I+ A + F+++ + + ++
Sbjct: 383 IDIGRWIHVYIDK----RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTG 447
+AMI FA HG++ + DLF RM K G++P+ +TF+G+L+ACS SG+++ G F+ MT
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 448 VFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGE 507
+ + P EHY C++DLLG +G + A +I D W SLL AC++HGNVELGE
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 508 TAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+ A +L++I+PE+ G+YVLL+N+YAS +W + L++ KG+KK G S I+
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 613
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 253/441 (57%), Gaps = 9/441 (2%)
Query: 125 TFSSVLNACGRVPA-MVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDG 183
T++S+L + P+ M+E Q+ + + + +L Y ++ A+ FD
Sbjct: 94 TWNSLLIGISKDPSRMMEAHQLFDEIPEP----DTFSYNIMLSCYVRNVNFEKAQSFFDR 149
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELY 243
M +D +W MI GYA+ M +AR LF +M E+N +W M++GY CGD++ A +
Sbjct: 150 MPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFF 209
Query: 244 DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGI 303
V + V W AMI GY K V A +F + V ++ TW AM++ Y +N ++G+
Sbjct: 210 KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 304 EMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEG--CCDRTLIVSNALIN 361
++F+ + + I+ + A+ C++L +++ + + + C D T + S LI+
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS--LIS 327
Query: 362 MHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVT 421
M+ KCG + AW+ F M+ +D+ ++AMI+ +A+HG + A+ LF M ++P+ +T
Sbjct: 328 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKEN 481
F+ VL AC+ +GLV G +F+ M + +EP P+HY C+VDLLGRAG+LE A LI+
Sbjct: 388 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Query: 482 ATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAE 541
A +G+LL ACRVH NVEL E AA LL+++ +++ YV LAN+YAS+++W
Sbjct: 448 PFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVA 507
Query: 542 VVKKLMSKKGIKKPSGYSWIQ 562
V+K M + + K GYSWI+
Sbjct: 508 RVRKRMKESNVVKVPGYSWIE 528
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 152/343 (44%), Gaps = 42/343 (12%)
Query: 205 MVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGK- 263
+V + +L + F ++A GD+ A ++ M K+ +TW +++ G K
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD 105
Query: 264 LGNVTEARRLFDGIPVPQDASTWAAMLACYAQN--------------------------G 297
+ EA +LFD IP P D ++ ML+CY +N G
Sbjct: 106 PSRMMEAHQLFDEIPEP-DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITG 164
Query: 298 YAKEG-IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
YA+ G +E +E+ + ++ EV+ IS + D+ ++ H + R ++
Sbjct: 165 YARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKAS----HFFKVAPVRGVVAW 220
Query: 357 NALINMHSKCGNIDLAWREFSTMRC-RDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
A+I + K ++LA F M +++ T++AMI+ + E+ + +D + LF M +EG+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 416 KPNQVTFIGVLNACSSSGLVEEGCRFFQIM---TGVFDIEPLPEHYACIVDLLGRAGQLE 472
+PN L CS ++ G + QI+ T D+ L ++ + + G+L
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL----TSLISMYCKCGELG 336
Query: 473 RAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE 515
A+ L E D W ++++ HGN + R +++
Sbjct: 337 DAWKLF-EVMKKKDVVAWNAMISGYAQHGNADKALCLFREMID 378
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A +F M + W ++I ++ + + + + M + G+ P+ SS L C
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVEN-SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ A+ G+Q+H + +S + T+L+ MY K G + DA +F+ M +DVVAW
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWN 354
Query: 194 AMICGYAKVAMMVEARWLFDNM-GERNSFTWTTMVAGYASCGD----------MKAAKEL 242
AMI GYA+ +A LF M + W T VA +C ++
Sbjct: 355 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414
Query: 243 YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML-AC 292
Y V D T M+ G+ G + EA +L +P A+ + +L AC
Sbjct: 415 YKVEPQPDHYT--CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 463
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 264/507 (52%), Gaps = 51/507 (10%)
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P T+ +++ C + A+ EGK+VH + SGF ++ LL MYAK G + DAR V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAK 240
FD M +RD+ +W M+ GYA+V ++ EAR LFD M E++S++WT MV GY + A
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 241 ELYDVMS----------------------------------------DKDGVTWVAMIAG 260
LY +M D D V W +++
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 261 YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVA 320
YGK G + EAR +FD I V +D +W +M+ Y ++ +EG +F E+ + + E
Sbjct: 263 YGKCGCIDEARNIFDKI-VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 321 MVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMR 380
G ++ACA L + + ++ D S++L++M++KCGNI+ A
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 381 CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCR 440
D+ +++++I A++G+ +A+ F + K G KP+ VTF+ VL+AC+ +GLVE+G
Sbjct: 382 KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE 441
Query: 441 FFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVH 500
FF +T + +HY C+VDLL R+G+ E+ S+I E W S+L C +
Sbjct: 442 FFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501
Query: 501 GNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSW 560
GN++L E AA+ L +I+PE+ TYV +AN+YA+ KW ++K M + G+ K G SW
Sbjct: 502 GNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSW 561
Query: 561 IQREISRQQTADSIKKKHFNLLADFSQ 587
EI R K+H + AD S
Sbjct: 562 T--EIKR--------KRHVFIAADTSH 578
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 166/499 (33%), Positives = 284/499 (56%), Gaps = 15/499 (3%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
AHKLF+ MPN + WT+L+ + + H + + + M + G+ P + SS+L +C
Sbjct: 303 AHKLFNGMPN-KNIISWTTLLSGYKQNALH-KEAMELFTSMSKFGLKPDMYACSSILTSC 360
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ A+ G QVH +++ G + V +L+ MYAK C+ DAR VFD DVV +
Sbjct: 361 ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Query: 194 AMICGYAKVAM---MVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVM 246
AMI GY+++ + EA +F +M R + T+ +++ AS + +K+++ +M
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 247 ----SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
+ D A+I Y + ++R +FD + V +D W +M A Y Q +E
Sbjct: 481 FKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV-KDLVIWNSMFAGYVQQSENEEA 539
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+ +F E++ ++ + E ++A L +++ + + + ++NAL++M
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
++KCG+ + A + F + RD+ ++++I+++A HG+ + A+ + +M EG++PN +TF
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
+GVL+ACS +GLVE+G + F++M F IEP EHY C+V LLGRAG+L +A LI++
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEV 542
T A W SLL+ C GNVEL E AA + DP+DSG++ +L+N+YAS+ W A+
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKK 778
Query: 543 VKKLMSKKGIKKPSGYSWI 561
V++ M +G+ K G SWI
Sbjct: 779 VRERMKVEGVVKEPGRSWI 797
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 231/460 (50%), Gaps = 32/460 (6%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLI-------RAFLSHRAHFRHCISTYAR 113
+++F + NI YA +FD +P WT++I R+++S + + +
Sbjct: 189 LIDFYLKDGNIDYARLVFDALPE-KSTVTWTTMISGCVKMGRSYVS--------LQLFYQ 239
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
+ + V+P G+ S+VL+AC +P + GKQ+H +++ G + + L+ Y K G
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 174 VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAG 229
V A +F+GM ++++++WT ++ GY + A+ EA LF +M + + + ++++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 230 YASCGDMKAAKEL--YDVMSDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDAST 285
AS + ++ Y + ++ ++V ++I Y K +T+AR++FD I D
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD-IFAAADVVL 418
Query: 286 WAAMLACYAQNGYA---KEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
+ AM+ Y++ G E + +F+++R I+ + + V + A A L + +S +
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQD 402
+ + + + +ALI+++S C + + F M+ +D+ +++M + + ++++
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEE 538
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF-QIMTGVFDIEPLPEHYACI 461
A++LF + +P++ TF ++ A + V+ G F Q++ + P + +
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--AL 596
Query: 462 VDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
+D+ + G E A+ ++A S D W S++++ HG
Sbjct: 597 LDMYAKCGSPEDAHKAF-DSAASRDVVCWNSVISSYANHG 635
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 185/394 (46%), Gaps = 22/394 (5%)
Query: 53 FLSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYA 112
+LS +L+ N S + YA K+F+ MP + W++++ A H + +
Sbjct: 80 YLSNILI---NLYSRAGGMVYARKVFEKMPE-RNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 113 RMHQSGVLPSGFTFSSVLNAC----GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMY 168
P+ + SS + AC GR MV Q+ LV+SGF + V T L+ Y
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMV--FQLQSFLVKSGFDRDVYVGTLLIDFY 193
Query: 169 AKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERN----SFTWT 224
K G + AR VFD + ++ V WT MI G K+ + LF + E N + +
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 225 TMVAGYASCGDMKAAKELYDVM----SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVP 280
T+++ + ++ K+++ + + D +I Y K G V A +LF+G+P
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-N 312
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL 340
++ +W +L+ Y QN KE +E+F + + +K A +++CA L + +
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 341 TDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKS 400
+ + V+N+LI+M++KC + A + F D+ ++AMI ++ G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 401 ---QDAIDLFFRMPKEGLKPNQVTFIGVLNACSS 431
+A+++F M ++P+ +TF+ +L A +S
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 146/299 (48%), Gaps = 14/299 (4%)
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMIC-----GY 199
VHG+++ G + + L+ +Y+++G + AR VF+ M +R++V+W+ M+ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 200 AKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS-------DKDGV 252
+ +++V + N + ++ + S D + ++ + S D+D
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQA-CSGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQA 312
+I Y K GN+ AR +FD +P + TW M++ + G + +++F ++ +
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 313 KIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLA 372
+ + +SAC+ L + + HI + + N LI+ + KCG + A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 373 WREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSS 431
+ F+ M +++ +++ +++ + ++ ++A++LF M K GLKP+ +L +C+S
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 4/185 (2%)
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV-RQAKIK 315
+I Y + G + AR++F+ +P ++ +W+ M++ +G +E + +F E R K
Sbjct: 85 LINLYSRAGGMVYARKVFEKMP-ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS 143
Query: 316 ITEVAMVGAISACAQL--RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAW 373
E + I AC+ L R M L + + DR + V LI+ + K GNID A
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 374 REFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSG 433
F + + T++ MI+ + G+S ++ LF+++ ++ + P+ VL+ACS
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 434 LVEEG 438
+E G
Sbjct: 264 FLEGG 268
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 279/509 (54%), Gaps = 7/509 (1%)
Query: 57 LLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQ 116
+ + L S+ I YA KLFD P D+F+ S+I+A+L R + + Y + +
Sbjct: 12 IFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETR-QYPDSFALYRDLRK 70
Query: 117 SGVL-PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVC 175
P FTF+++ +C + +G Q+H ++ + GF + V T ++ MYAK G +
Sbjct: 71 ETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMG 130
Query: 176 DARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGE-RNSFTWTTMVAGYASCG 234
AR+ FD M R V+WTA+I GY + + A LFD M ++ + M+ G+ G
Sbjct: 131 CARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSG 190
Query: 235 DMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYA 294
DM +A+ L+D M+ K +TW MI GY + ++ AR+LFD +P ++ +W M+ Y
Sbjct: 191 DMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWNTMIGGYC 249
Query: 295 QNGYAKEGIEMFKEVR-QAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTL 353
QN +EGI +F+E++ + +V ++ + A + + + ++ D+ +
Sbjct: 250 QNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKV 309
Query: 354 IVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE 413
V A+++M+SKCG I+ A R F M + + +++AMI +A +G ++ A+DLF M E
Sbjct: 310 KVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE 369
Query: 414 GLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLER 473
KP+++T + V+ AC+ GLVEEG ++F +M + + EHY C+VDLLGRAG L+
Sbjct: 370 E-KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKE 427
Query: 474 AYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYAS 533
A LI + S L+AC + ++E E + +E++P++ G YVLL N+YA+
Sbjct: 428 AEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAA 487
Query: 534 QDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+W +VK +M K KK G S I+
Sbjct: 488 DKRWDDFGMVKNVMRKNQAKKEVGCSLIE 516
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 258/472 (54%), Gaps = 63/472 (13%)
Query: 143 KQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD--ARDVFDGMDDRDVVAWTAMICGYA 200
KQ+HG +++ G + + T L+ K G D AR V + + R+ WTA+I GYA
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 201 KVAMMVEARWLFDNMGERN----SFTWT-------------------------------- 224
EA ++ M + SFT++
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVY 185
Query: 225 ---TMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQ 281
TM+ Y C + A++++D M ++D ++W +IA Y ++GN+ A LF+ +P +
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT-K 244
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQL-------RDI 334
D W AM+ +AQN +E +E F + ++ I+ EV + G ISACAQL R +
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 335 RMSN----ALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAM 390
+++ + +DH+ ++ +ALI+M+SKCGN++ A F +M ++++TYS+M
Sbjct: 305 QIAQKSGYSPSDHV---------VIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSM 355
Query: 391 ITAFAEHGKSQDAIDLFFRMPKEG-LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVF 449
I A HG++Q+A+ LF M + +KPN VTF+G L ACS SGLV++G + F M F
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTF 415
Query: 450 DIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETA 509
++P +HY C+VDLLGR G+L+ A LIK + WG+LL ACR+H N E+ E A
Sbjct: 416 GVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIA 475
Query: 510 ARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
A HL E++P+ G Y+LL+N+YAS W G V+KL+ +KG+KK SW+
Sbjct: 476 AEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 190/453 (41%), Gaps = 87/453 (19%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
+ F+WT++IR + + F I+ Y M + + P FTFS++L ACG + + G+Q
Sbjct: 113 NPFLWTAVIRGY-AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
H + + V ++ MY K + AR VFD M +RDV++WT +I YA+V M
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 206 VEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVM------------------- 246
A LF+++ ++ WT MV G+A + A E +D M
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 247 ---------------SDKDG-------VTWVAMIAGYGKLGNVTEARRLFDGIPVPQDAS 284
+ K G V A+I Y K GNV EA +F + ++
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVF 350
Query: 285 TWAAMLACYAQNGYAKEGIEMFKE-VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH 343
T+++M+ A +G A+E + +F V Q +IK V VGA+ AC+
Sbjct: 351 TYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSH------------- 397
Query: 344 IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDA 403
G D+ V D ++ F RD YT M+ G+ Q+A
Sbjct: 398 --SGLVDQGRQV-------------FDSMYQTFGVQPTRDHYT--CMVDLLGRTGRLQEA 440
Query: 404 IDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMT-GVFDIEP-LPEHYACI 461
++L M E P+ + +L AC + +I +F++EP + +Y +
Sbjct: 441 LELIKTMSVE---PHGGVWGALLGACR----IHNNPEIAEIAAEHLFELEPDIIGNYILL 493
Query: 462 VDLLGRAGQ---LERAYSLIKENA-TSADATTW 490
++ AG + R LIKE A +W
Sbjct: 494 SNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 295 bits (754), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 271/522 (51%), Gaps = 36/522 (6%)
Query: 73 YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSG-VLPSGFTFSSVLN 131
YA +L P PDAF++ +L+R + S + ++ + M + G V P F+F+ V+
Sbjct: 57 YARRLLLCFPE-PDAFMFNTLVRGY-SESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 132 ACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVA 191
A ++ G Q+H + ++ G + V T L+GMY GCV AR VF
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVF---------- 164
Query: 192 WTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDG 251
D M + N W ++ D+ A+E++D M ++
Sbjct: 165 ---------------------DEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNH 203
Query: 252 VTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQ 311
+W M+AGY K G + A+R+F +P D S W+ M+ A NG E F+E+++
Sbjct: 204 TSWNVMLAGYIKAGELESAKRIFSEMPHRDDVS-WSTMIVGIAHNGSFNESFLYFRELQR 262
Query: 312 AKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDL 371
A + EV++ G +SAC+Q L +E+ + V+NALI+M+S+CGN+ +
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 372 AWREFSTMR-CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACS 430
A F M+ R + ++++MI A HG+ ++A+ LF M G+ P+ ++FI +L+ACS
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
Query: 431 SSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTW 490
+GL+EEG +F M V+ IEP EHY C+VDL GR+G+L++AY I + A W
Sbjct: 383 HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 491 GSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKK 550
+LL AC HGN+EL E + L E+DP +SG VLL+N YA+ KW ++K M +
Sbjct: 443 RTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQ 502
Query: 551 GIKKPSGYSWIQREISRQQTADSIKKKHFNLLADFSQSDIFF 592
IKK + +S ++ + + KKK ++ A +I
Sbjct: 503 RIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIIL 544
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 295 bits (754), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 284/535 (53%), Gaps = 22/535 (4%)
Query: 56 PLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMH 115
P+ ++N + N+ A LFD W S+I + ++ + + M
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDK-TEVKSVVTWNSMISGYAANGLDL-EALGMFYSMR 287
Query: 116 QSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVC 175
+ V S +F+SV+ C + + +Q+H +V+ GF ++ ++TAL+ Y+K +
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 176 DARDVFDGMD-DRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGY 230
DA +F + +VV+WTAMI G+ + EA LF M + N FT++ ++
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 231 ASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML 290
+ ++ ++ A++ Y KLG V EA ++F GI +D W+AML
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAML 466
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH--IEEGC 348
A YAQ G + I+MF E+ + IK E ++ CA + M H +
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT-NASMGQGKQFHGFAIKSR 525
Query: 349 CDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFF 408
D +L VS+AL+ M++K GNI+ A F R +D+ ++++MI+ +A+HG++ A+D+F
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 409 RMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRA 468
M K +K + VTFIGV AC+ +GLVEEG ++F IM I P EH +C+VDL RA
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLA 528
GQLE+A +I+ A +T W ++LAACRVH ELG AA ++ + PEDS YVLL+
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705
Query: 529 NMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREISRQQTADSIKKKHFNLLA 583
NMYA W V+KLM+++ +KK GYSWI+ +K K ++ LA
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE-----------VKNKTYSFLA 749
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 218/448 (48%), Gaps = 29/448 (6%)
Query: 69 SNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSS 128
SN K+FD M + WT+LI + + + ++ + RM G P+ FTF++
Sbjct: 142 SNFKDGRKVFDEMKE-RNVVTWTTLISGYARNSMN-DEVLTLFMRMQNEGTQPNSFTFAA 199
Query: 129 VLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD 188
L G QVH +V++G V +L+ +Y K G V AR +FD + +
Sbjct: 200 ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 259
Query: 189 VVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKEL-- 242
VV W +MI GYA + +EA +F +M + ++ +++ A+ +++ ++L
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 243 ----YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGY 298
Y + D++ T A++ Y K + +A RLF I + +W AM++ + QN
Sbjct: 320 SVVKYGFLFDQNIRT--ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 299 AKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNA 358
+E +++F E+++ ++ E ++A + + + + + +R+ V A
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTA 433
Query: 359 LINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
L++ + K G ++ A + FS + +D+ +SAM+ +A+ G+++ AI +F + K G+KPN
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493
Query: 419 QVTFIGVLNACSSSGL-VEEGCRFFQIMTGVFDIEPLPEHYACI----VDLLGRAGQLER 473
+ TF +LN C+++ + +G +F F I+ + C+ + + + G +E
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFHG-----FAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 474 AYSLIKENATSADATTWGSLLAACRVHG 501
A + K D +W S+++ HG
Sbjct: 549 AEEVFKRQ-REKDLVSWNSMISGYAQHG 575
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 218/462 (47%), Gaps = 24/462 (5%)
Query: 59 LRVLNFSSEKSNICY-AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQS 117
+R+ F + S+ Y AH LFD P D + SL+ F S + + +H+
Sbjct: 30 VRIYCFGTVSSSRLYNAHNLFDKSPG-RDRESYISLLFGF-SRDGRTQEAKRLFLNIHRL 87
Query: 118 GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDA 177
G+ FSSVL + + G+Q+H + ++ GF + V T+L+ Y K D
Sbjct: 88 GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG 147
Query: 178 RDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASC 233
R VFD M +R+VV WT +I GYA+ +M E LF M + NSFT+ + A
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 234 GDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
G +++ V+ DK ++I Y K GNV +AR LFD V + TW +M
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV-KSVVTWNSM 266
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
++ YA NG E + MF +R ++++E + I CA L+++R + L + +
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF 326
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRC-RDMYTYSAMITAFAEHGKSQDAIDLFF 408
+ AL+ +SKC + A R F + C ++ +++AMI+ F ++ ++A+DLF
Sbjct: 327 LFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFS 386
Query: 409 RMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRA 468
M ++G++PN+ T+ +L A E + + + E ++D +
Sbjct: 387 EMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKT-----NYERSSTVGTALLDAYVKL 441
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAA 510
G++E A + D W ++LA G + GET A
Sbjct: 442 GKVEEAAKVF-SGIDDKDIVAWSAMLA-----GYAQTGETEA 477
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 195/609 (32%), Positives = 293/609 (48%), Gaps = 104/609 (17%)
Query: 57 LLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAF---------------LSHR 101
L+ ++N S+ +A KLFD MP AF W +++ A+ L R
Sbjct: 51 LMNNLMNVYSKTGYALHARKLFDEMP-LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR 109
Query: 102 ---------------AHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVH 146
+ I M + G+ P+ FT ++VL + M GK+VH
Sbjct: 110 DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVH 169
Query: 147 GRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMV 206
+V+ G GN V +LL MYAK G A+ VFD M RD+ +W AMI + +V M
Sbjct: 170 SFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMD 229
Query: 207 EARWLFDNMGERNSFTWTTMVAGYASCG-DMKA----AKELYDVMSDKD----------- 250
A F+ M ER+ TW +M++G+ G D++A +K L D + D
Sbjct: 230 LAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
Query: 251 ------------------------GVTWVAMIAGYGKLGNVTEARR-------------- 272
G+ A+I+ Y + G V ARR
Sbjct: 290 ANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEG 349
Query: 273 ---LFDG------------IPVP---QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
L DG I V +D W AM+ Y Q+G E I +F+ +
Sbjct: 350 FTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ 409
Query: 315 KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWR 374
+ + +S + L + + + ++ VSNALI M++K GNI A R
Sbjct: 410 RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASR 469
Query: 375 EFSTMRC-RDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSG 433
F +RC RD ++++MI A A+HG +++A++LF M EGL+P+ +T++GV +AC+ +G
Sbjct: 470 AFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Query: 434 LVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSL 493
LV +G ++F +M V I P HYAC+VDL GRAG L+ A I++ D TWGSL
Sbjct: 530 LVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSL 589
Query: 494 LAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIK 553
L+ACRVH N++LG+ AA LL ++PE+SG Y LAN+Y++ KW A ++K M +K
Sbjct: 590 LSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVK 649
Query: 554 KPSGYSWIQ 562
K G+SWI+
Sbjct: 650 KEQGFSWIE 658
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 126/524 (24%), Positives = 208/524 (39%), Gaps = 127/524 (24%)
Query: 121 PSGFTFSSVLNAC------------GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMY 168
P + S++L C GR A + VH R+++SG + + L+ +Y
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQL----VHCRVIKSGLMFSVYLMNNLMNVY 59
Query: 169 AKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVA 228
+K+G AR +FD M R +W ++ Y+K M FD + +R+S +WTTM+
Sbjct: 60 SKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIV 119
Query: 229 GYASCGDM-KAAKELYDVMSD----------------------KDGVTWVAMIAGYGKLG 265
GY + G KA + + D++ + + G + I G G
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRG 179
Query: 266 NVTEARRLFD-----GIP----------VPQDASTWAAMLAC------------------ 292
NV+ + L + G P V +D S+W AM+A
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 293 -------------YAQNGYAKEGIEMF-KEVRQAKIKITEVAMVGAISACAQLRDIRMSN 338
+ Q GY +++F K +R + + + +SACA L + +
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 339 ALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWRE----------------------- 375
+ HI D + IV NALI+M+S+CG ++ A R
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 376 ----------FSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
F +++ RD+ ++AMI + +HG +AI+LF M G +PN T +
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQL---ERAYSLIKENA 482
L+ SS + G + +I + A I + +AG + RA+ LI+
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALIT-MYAKAGNITSASRAFDLIR--- 475
Query: 483 TSADATTWGSLLAACRVHGNVELG-ETAARHLLEIDPEDSGTYV 525
D +W S++ A HG+ E E L+E D TYV
Sbjct: 476 CERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYV 519
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 265/464 (57%), Gaps = 18/464 (3%)
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
+ G+ T+S ++ C A+ EG + L +G + L+ MY K
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 174 VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLF-----DNMGERNSFTWTTMVA 228
+ DA +FD M R+V++WT MI Y+K + +A L DN+ N +T+++++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV-RPNVYTYSSVLR 170
Query: 229 GYASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDAS 284
SC M + L+ + + D A+I + KLG +A +FD + V DA
Sbjct: 171 ---SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAI 226
Query: 285 TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI 344
W +++ +AQN + +E+FK +++A + + + AC L + + + H+
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL--GMQAHV 284
Query: 345 EEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAI 404
D+ LI++NAL++M+ KCG+++ A R F+ M+ RD+ T+S MI+ A++G SQ+A+
Sbjct: 285 HIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 405 DLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDL 464
LF RM G KPN +T +GVL ACS +GL+E+G +F+ M ++ I+P+ EHY C++DL
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 465 LGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTY 524
LG+AG+L+ A L+ E DA TW +LL ACRV N+ L E AA+ ++ +DPED+GTY
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTY 464
Query: 525 VLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREISRQ 568
LL+N+YA+ KW E ++ M +GIKK G SWI E+++Q
Sbjct: 465 TLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI--EVNKQ 506
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 18/234 (7%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A +FD M DA +W S+I F + + + + RM ++G + T +SVL AC
Sbjct: 213 ALSVFDEMVT-GDAIVWNSIIGGF-AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ + G Q H +V+ + + I+ AL+ MY K G + DA VF+ M +RDV+ W+
Sbjct: 271 TGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWS 328
Query: 194 AMICGYAKVAMMVEARWLFDNMGERNSF-TWTTMVAGYASCGD----------MKAAKEL 242
MI G A+ EA LF+ M + + T+V +C ++ K+L
Sbjct: 329 TMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 388
Query: 243 YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML-ACYAQ 295
Y + D + MI GK G + +A +L + + DA TW +L AC Q
Sbjct: 389 YGI--DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ 440
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 176/561 (31%), Positives = 289/561 (51%), Gaps = 75/561 (13%)
Query: 73 YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQS-----GVLPSGFTFS 127
YA ++FD +P P+ F W +L+ A+ S ST+ ++ VL G++ S
Sbjct: 59 YARRVFDRIPQ-PNLFSWNNLLLAY-SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLS 116
Query: 128 SVLNAC---------------GRVPAMVE------------GKQVHGRLVQSGFGGNKIV 160
++ A RV M GKQ+HG++++ GF +V
Sbjct: 117 GLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLV 176
Query: 161 QTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNS 220
+ LL MYA GC+ DA+ VF G+DDR+ V + +++ G M+ +A LF M E++S
Sbjct: 177 GSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDS 235
Query: 221 FTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTE------- 269
+W M+ G A G K A E + M + D + +++ G LG + E
Sbjct: 236 VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHAC 295
Query: 270 ----------------------------ARRLFDGIPVPQDASTWAAMLACYAQNGYAKE 301
A+ +FD + ++ +W AM+ Y Q G A+E
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEE 354
Query: 302 GIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALIN 361
+++F +++++ I + AISACA + + + + VSN+L+
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 362 MHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVT 421
++ KCG+ID + R F+ M RD +++AM++A+A+ G++ + I LF +M + GLKP+ VT
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVT 474
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKEN 481
GV++ACS +GLVE+G R+F++MT + I P HY+C++DL R+G+LE A I
Sbjct: 475 LTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Query: 482 ATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAE 541
DA W +LL+ACR GN+E+G+ AA L+E+DP Y LL+++YAS+ KW
Sbjct: 535 PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVA 594
Query: 542 VVKKLMSKKGIKKPSGYSWIQ 562
+++ M +K +KK G SWI+
Sbjct: 595 QLRRGMREKNVKKEPGQSWIK 615
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 196/454 (43%), Gaps = 87/454 (19%)
Query: 143 KQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKV 202
K +HG ++++ + ++ YA AR VFD + ++ +W ++ Y+K
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 203 AMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVM---------------- 246
++ E F+ + +R+ TW ++ GY+ G + AA + Y+ M
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 247 ----SDKDGVTWVAMIAG--------------------YGKLGNVTEARRLFDGIP---- 278
S V+ I G Y +G +++A+++F G+
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 279 -------------------------VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAK 313
+ +D+ +WAAM+ AQNG AKE IE F+E++
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 314 IKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAW 373
+K+ + + AC L I + I + V +ALI+M+ KC + A
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 374 REFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSG 433
F M+ +++ +++AM+ + + G++++A+ +F M + G+ P+ T ++AC++
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 434 LVEEGCRFF--QIMTGVFDIEPLPEHYACI----VDLLGRAGQLERAYSLIKENATSADA 487
+EEG +F I +G+ HY + V L G+ G ++ + L E DA
Sbjct: 386 SLEEGSQFHGKAITSGLI-------HYVTVSNSLVTLYGKCGDIDDSTRLFNE-MNVRDA 437
Query: 488 TTWGSLLAACRVHG----NVELGETAARHLLEID 517
+W ++++A G ++L + +H L+ D
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/529 (32%), Positives = 272/529 (51%), Gaps = 47/529 (8%)
Query: 78 FDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVP 137
F T+ + P W S+IR F + ++ F ++++ M SG P F SVL +C +
Sbjct: 62 FKTLKS-PPVLAWKSVIRCF-TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119
Query: 138 AMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK---------SGCVCD------------ 176
+ G+ VHG +V+ G + AL+ MYAK G V D
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 177 ---------------ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----E 217
R VF+ M +DVV++ +I GYA+ M +A + MG +
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 218 RNSFTWTTMVAGYASCGDMKAAKELYDVM----SDKDGVTWVAMIAGYGKLGNVTEARRL 273
+SFT ++++ ++ D+ KE++ + D D +++ Y K + ++ R+
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 274 FDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRD 333
F + +D +W +++A Y QNG E + +F+++ AK+K VA I ACA L
Sbjct: 300 FSRLYC-RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 334 IRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITA 393
+ + L ++ G + +++AL++M+SKCGNI A + F M D +++A+I
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418
Query: 394 FAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEP 453
A HG +A+ LF M ++G+KPNQV F+ VL ACS GLV+E +F MT V+ +
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478
Query: 454 LPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHL 513
EHYA + DLLGRAG+LE AY+ I + + W +LL++C VH N+EL E A +
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
Query: 514 LEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+D E+ G YVL+ NMYAS +W ++ M KKG++K SWI+
Sbjct: 539 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 587
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 180/385 (46%), Gaps = 47/385 (12%)
Query: 76 KLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGR 135
++F+ MP D + ++I + + + + M + + P FT SSVL
Sbjct: 197 RVFEVMPR-KDVVSYNTIIAGY-AQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSE 254
Query: 136 VPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAM 195
+++GK++HG +++ G + + ++L+ MYAKS + D+ VF + RD ++W ++
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 196 ICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYD-VMSDKD 250
+ GY + EA LF M + + +++++ A + K+L+ V+
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 251 GVTWV---AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFK 307
G A++ Y K GN+ AR++FD + V D +W A++ +A +G+ E + +F+
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 308 EVRQAKIKITEVAMVGAISACAQL--------------------RDIRMSNALTD----- 342
E+++ +K +VA V ++AC+ + +++ A+ D
Sbjct: 434 EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRA 493
Query: 343 --------HIEEGCCDRTLIVSNALINMHSKCGNIDLAWR---EFSTMRCRDMYTYSAMI 391
I + C + T V + L++ S N++LA + + T+ +M Y M
Sbjct: 494 GKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMC 553
Query: 392 TAFAEHGKSQDAIDLFFRMPKEGLK 416
+A +G+ ++ L RM K+GL+
Sbjct: 554 NMYASNGRWKEMAKLRLRMRKKGLR 578
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/539 (30%), Positives = 277/539 (51%), Gaps = 45/539 (8%)
Query: 66 SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL---PS 122
SE + Y+ K+ + N P+ F W IR F S + + Y +M + G P
Sbjct: 98 SESRYLDYSVKILKGIEN-PNIFSWNVTIRGF-SESENPKESFLLYKQMLRHGCCESRPD 155
Query: 123 GFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFD 182
FT+ + C + G + G +++ V A + M+A G + +AR VFD
Sbjct: 156 HFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD 215
Query: 183 GMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAG--------- 229
RD+V+W +I GY K+ +A +++ M + T +V+
Sbjct: 216 ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNR 275
Query: 230 --------------------------YASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGK 263
++ CGD+ A+ ++D + + V+W MI+GY +
Sbjct: 276 GKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYAR 335
Query: 264 LGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVG 323
G + +R+LFD + +D W AM+ Q ++ + +F+E++ + K E+ M+
Sbjct: 336 CGLLDVSRKLFDDME-EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIH 394
Query: 324 AISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRD 383
+SAC+QL + + + +IE+ + + +L++M++KCGNI A F ++ R+
Sbjct: 395 CLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN 454
Query: 384 MYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQ 443
TY+A+I A HG + AI F M G+ P+++TFIG+L+AC G+++ G +F
Sbjct: 455 SLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS 514
Query: 444 IMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNV 503
M F++ P +HY+ +VDLLGRAG LE A L++ ADA WG+LL CR+HGNV
Sbjct: 515 QMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNV 574
Query: 504 ELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
ELGE AA+ LLE+DP DSG YVLL MY + W A+ +++M+++G++K G S I+
Sbjct: 575 ELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIE 633
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 259/467 (55%), Gaps = 9/467 (1%)
Query: 104 FRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTA 163
R+ + +M ++P+ +T+ S+L C R+ + G+Q+H +++++ F N V +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 164 LLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFT- 222
L+ MYAK G + A D+ +DVV+WT MI GY + +A F M +R +
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 223 WTTMVAGYASCGDMKAAKELYDVMSD-------KDGVTWVAMIAGYGKLGNVTEARRLFD 275
+ ++C ++A KE + + D A++ Y + G + E+ F+
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 276 GIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIR 335
D W A+++ + Q+G +E + +F + + I A+ A ++ +++
Sbjct: 651 QTEAG-DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 336 MSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFA 395
+ I + D V NALI+M++KCG+I A ++F + ++ +++A+I A++
Sbjct: 710 QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769
Query: 396 EHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLP 455
+HG +A+D F +M ++PN VT +GVL+ACS GLV++G +F+ M + + P P
Sbjct: 770 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829
Query: 456 EHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE 515
EHY C+VD+L RAG L RA I+E DA W +LL+AC VH N+E+GE AA HLLE
Sbjct: 830 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Query: 516 IDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
++PEDS TYVLL+N+YA KW ++ ++ M +KG+KK G SWI+
Sbjct: 890 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 219/473 (46%), Gaps = 30/473 (6%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV 119
++ +F K ++ A K+FD MP F W +I+ L+ R + RM V
Sbjct: 125 KLFDFYLFKGDLYGAFKVFDEMPE-RTIFTWNKMIKE-LASRNLIGEVFGLFVRMVSENV 182
Query: 120 LPSGFTFSSVLNAC-GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDAR 178
P+ TFS VL AC G A +Q+H R++ G + +V L+ +Y+++G V AR
Sbjct: 183 TPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLAR 242
Query: 179 DVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKA 238
VFDG+ +D +W AMI G +K EA LF +M + M YA + A
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM-----YVLGIMPTPYAFSSVLSA 297
Query: 239 AKEL--YDVMSDKDGV---------TWV--AMIAGYGKLGNVTEARRLFDGIPVPQDAST 285
K++ ++ G+ T+V A+++ Y LGN+ A +F + +DA T
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVT 356
Query: 286 WAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIE 345
+ ++ +Q GY ++ +E+FK + ++ + + AC+ + L +
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 346 EGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAID 405
+ + AL+N+++KC +I+ A F ++ ++ M+ A+ +++
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF-QIMTGVFDIEPLPEHYAC--IV 462
+F +M E + PNQ T+ +L C G +E G + QI+ F + Y C ++
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLI 532
Query: 463 DLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE 515
D+ + G+L+ A+ ++ A D +W +++A + + T R +L+
Sbjct: 533 DMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 214/470 (45%), Gaps = 22/470 (4%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+++ S + A ++FD + D W ++I LS I + M+ G++
Sbjct: 228 LIDLYSRNGFVDLARRVFDGL-RLKDHSSWVAMISG-LSKNECEAEAIRLFCDMYVLGIM 285
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P+ + FSSVL+AC ++ ++ G+Q+HG +++ GF + V AL+ +Y G + A +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 181 FDGMDDRDVVAWTAMI-----CGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGD 235
F M RD V + +I CGY + AM + R D + E +S T ++V ++ G
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL-EPDSNTLASLVVACSADGT 404
Query: 236 MKAAKELYDVMSDKDGVTWVAMIAG-----YGKLGNVTEARRLFDGIPVPQDASTWAAML 290
+ ++L+ + K G I G Y K ++ A F V ++ W ML
Sbjct: 405 LFRGQQLH-AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV-ENVVLWNVML 462
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
Y + +F++++ +I + + C +L D+ + + I +
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
V + LI+M++K G +D AW +D+ +++ MI + ++ A+ F +M
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 411 PKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF-QIMTGVFDIEPLPEHYACIVDLLGRAG 469
G++ ++V ++AC+ ++EG + Q F + LP A +V L R G
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD-LPFQNA-LVTLYSRCG 640
Query: 470 QLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPE 519
++E +Y L E + D W +L++ + GN E A R + ++ E
Sbjct: 641 KIEESY-LAFEQTEAGDNIAWNALVSGFQQSGN---NEEALRVFVRMNRE 686
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 202/465 (43%), Gaps = 49/465 (10%)
Query: 118 GVLPSGFTFSSVLNACGRVP-AMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
G+ P+ T +L C + ++ EG+++H ++++ G N + L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAG-YASCG- 234
A VFD M +R + W MI A ++ E LF M N +G +C
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 235 --------DMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTW 286
+ A+ LY + D V +I Y + G V ARR+FDG+ + +D S+W
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDST-VVCNPLIDLYSRNGFVDLARRVFDGLRL-KDHSSW 256
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEE 346
AM++ ++N E I +F ++ I T A +SAC ++ + + L + +
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 347 GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDL 406
V NAL++++ GN+ A FS M RD TY+ +I ++ G + A++L
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 407 FFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV------------------ 448
F RM +GL+P+ T ++ ACS+ G + G + T +
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 449 -FDIEPLPEHYA-----------CIVDLLGRAGQLERAYSLIKE---NATSADATTWGSL 493
DIE +++ ++ G L ++ + ++ + T+ S+
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 494 LAACRVHGNVELGETAARHLLEIDPEDSGTYV--LLANMYASQDK 536
L C G++ELGE +++ + + + YV +L +MYA K
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNA-YVCSVLIDMYAKLGK 540
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 282/527 (53%), Gaps = 23/527 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++F+ M + D W ++I +++ + RM+ G++ G +S L AC
Sbjct: 482 ARQIFERMCD-RDNVTWNTIIGSYVQDENE-SEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
V + +GKQVH V+ G + ++L+ MY+K G + DAR VF + + VV+
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVM--- 246
A+I GY++ + EA LF M R + T+ T+V + + + +
Sbjct: 600 ALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR 658
Query: 247 --SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
S + ++++ Y +TEA LF + P+ W M++ ++QNG+ +E ++
Sbjct: 659 GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK 718
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+KE+R + + V + C+ L +R A+ I D + SN LI+M++
Sbjct: 719 FYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYA 778
Query: 365 KCGNIDLAWREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFI 423
KCG++ + + F MR R ++ +++++I +A++G ++DA+ +F M + + P+++TF+
Sbjct: 779 KCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFL 838
Query: 424 GVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT 483
GVL ACS +G V +G + F++M G + IE +H AC+VDLLGR G L+ A I+
Sbjct: 839 GVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNL 898
Query: 484 SADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVV 543
DA W SLL ACR+HG+ GE +A L+E++P++S YVLL+N+YASQ W A +
Sbjct: 899 KPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANAL 958
Query: 544 KKLMSKKGIKKPSGYSWIQREISRQQTADSIKKKHFNLLADFSQSDI 590
+K+M +G+KK GYSWI E ++ H D S S+I
Sbjct: 959 RKVMRDRGVKKVPGYSWIDVE----------QRTHIFAAGDKSHSEI 995
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 208/441 (47%), Gaps = 43/441 (9%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+++ ++ + + YA K FD + D W S++ + S + ++ + ++ +
Sbjct: 101 IVDLYAKCAQVSYAEKQFDFLEK--DVTAWNSMLSMY-SSIGKPGKVLRSFVSLFENQIF 157
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P+ FTFS VL+ C R + G+Q+H +++ G N AL+ MYAK + DAR V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVAGYASCGDM 236
F+ + D + V WT + GY K + EA +F+ M G R + + T++ Y G +
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 237 KAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQN 296
K A+ L+ MS D V W MI+G+GK G T A
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA-------------------------- 311
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL-TDHIEEGCCDRTLIV 355
IE F +R++ +K T + +SA + ++ + + + I+ G + V
Sbjct: 312 ------IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS-NIYV 364
Query: 356 SNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
++L++M+SKC ++ A + F + ++ ++AMI +A +G+S ++LF M G
Sbjct: 365 GSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGY 424
Query: 416 KPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAY 475
+ TF +L+ C++S +E G +F I+ + L A +VD+ + G LE A
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA-LVDMYAKCGALEDAR 483
Query: 476 SLIKENATSADATTWGSLLAA 496
+ E D TW +++ +
Sbjct: 484 QIF-ERMCDRDNVTWNTIIGS 503
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 199/447 (44%), Gaps = 27/447 (6%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A K+F+ + D F W ++IR + +H + + M SG FTF+S+L+ C
Sbjct: 381 AAKVFEALEEKNDVF-WNAMIRGY-AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ G Q H +++ N V AL+ MYAK G + DAR +F+ M DRD V W
Sbjct: 439 AASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWN 498
Query: 194 AMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS------ 247
+I Y + EA LF M + G +KA ++ +
Sbjct: 499 TIIGSYVQDENESEAFDLFKRMN-----LCGIVSDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 248 -------DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAK 300
D+D T ++I Y K G + +AR++F +P + A++A Y+QN +
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSMNALIAGYSQNNL-E 611
Query: 301 EGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI-EEGCCDRTLIVSNAL 359
E + +F+E+ + +E+ + AC + + + I + G + +L
Sbjct: 612 EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISL 671
Query: 360 INMHSKCGNIDLAWREFSTMRC-RDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
+ M+ + A FS + + + ++ M++ +++G ++A+ + M +G+ P+
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPD 731
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGV-FDIEPLPEHYACIVDLLGRAGQLERAYSL 477
Q TF+ VL CS + EG ++ + D++ L + ++D+ + G ++ + +
Sbjct: 732 QATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN--TLIDMYAKCGDMKGSSQV 789
Query: 478 IKENATSADATTWGSLLAACRVHGNVE 504
E ++ +W SL+ +G E
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKNGYAE 816
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 142/309 (45%), Gaps = 15/309 (4%)
Query: 248 DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFK 307
D +G A++ Y K V+ A + FD + +D + W +ML+ Y+ G + + F
Sbjct: 92 DSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE--KDVTAWNSMLSMYSSIGKPGKVLRSFV 149
Query: 308 EVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCG 367
+ + +I + +S CA+ ++ + + + +R AL++M++KC
Sbjct: 150 SLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCD 209
Query: 368 NIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN 427
I A R F + + ++ + + + + G ++A+ +F RM EG +P+ + F+ V+N
Sbjct: 210 RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 428 ACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAG----QLERAYSLIKENAT 483
G +++ F M+ P + ++ G+ G +E +++ K +
Sbjct: 270 TYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 484 SADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYV--LLANMYASQDKWVGAE 541
S +T GS+L+A + N++LG +++ S YV L +MY+ +K A
Sbjct: 325 ST-RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA-SNIYVGSSLVSMYSKCEKMEAAA 382
Query: 542 VVKKLMSKK 550
V + + +K
Sbjct: 383 KVFEALEEK 391
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 276/486 (56%), Gaps = 16/486 (3%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
DA WTS++ +++ + H + + + M G+ + FT SS + AC + + G+
Sbjct: 127 DAISWTSMMSGYVTGKEHVK-ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCF 185
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
HG ++ GF N + + L +Y + DAR VFD M + DV+ WTA++ ++K +
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLY 245
Query: 206 VEARWLFDNMGERNSF-----TWTTMVAGYASCGDMKAAKELY-DVMSDKDGVTWV---A 256
EA LF M T+ T++ + +K KE++ ++++ G V +
Sbjct: 246 EEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESS 305
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKI 316
++ YGK G+V EAR++F+G+ +++ +W+A+L Y QNG ++ IE+F+E+ + +
Sbjct: 306 LLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL-- 362
Query: 317 TEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF 376
+ ACA L +R+ + C +IV +ALI+++ K G ID A R +
Sbjct: 363 --YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 377 STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
S M R+M T++AM++A A++G+ ++A+ F M K+G+KP+ ++FI +L AC +G+V+
Sbjct: 421 SKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
Query: 437 EGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAA 496
EG +F +M + I+P EHY+C++DLLGRAG E A +L++ DA+ WG LL
Sbjct: 481 EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGP 540
Query: 497 CRVHGNV-ELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKP 555
C + + + E A+ ++E++P+ +YVLL+NMY + + A ++KLM ++G+ K
Sbjct: 541 CAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKT 600
Query: 556 SGYSWI 561
G SWI
Sbjct: 601 VGQSWI 606
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 160/286 (55%), Gaps = 11/286 (3%)
Query: 50 YHHFLSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCIS 109
++HF+S L + + E + A ++FD MP PD WT+++ AF S + +
Sbjct: 196 WNHFISSTLAYLYGVNREPVD---ARRVFDEMPE-PDVICWTAVLSAF-SKNDLYEEALG 250
Query: 110 TYARMHQS-GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMY 168
+ MH+ G++P G TF +VL ACG + + +GK++HG+L+ +G G N +V+++LL MY
Sbjct: 251 LFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMY 310
Query: 169 AKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVA 228
K G V +AR VF+GM ++ V+W+A++ GY + +A +F M E++ + + T++
Sbjct: 311 GKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLK 370
Query: 229 GYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDAS 284
A ++ KE++ + + + A+I YGK G + A R++ + + ++
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI-RNMI 429
Query: 285 TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQ 330
TW AML+ AQNG +E + F ++ + IK ++ + ++AC
Sbjct: 430 TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGH 475
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 201/403 (49%), Gaps = 23/403 (5%)
Query: 115 HQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG-C 173
H S + + ++S+L C +V + + G Q H +V+SG ++ V +LL +Y K G
Sbjct: 53 HSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG 112
Query: 174 VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAG 229
+ + R VFDG +D ++WT+M+ GY V+A +F M + N FT ++ V
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKA 172
Query: 230 YASCGDMKAAKELYDVMSDKDGVTWVAMIAG-----YGKLGNVTEARRLFDGIPVPQDAS 284
+ G+++ + + V+ G W I+ YG +ARR+FD +P P D
Sbjct: 173 CSELGEVRLGRCFHGVVIT-HGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEP-DVI 230
Query: 285 TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAI-SACAQLRDIRMSNALTDH 343
W A+L+ +++N +E + +F + + K + + + G + +AC LR ++ +
Sbjct: 231 CWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGK 290
Query: 344 IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDA 403
+ ++V ++L++M+ KCG++ A + F+ M ++ ++SA++ + ++G+ + A
Sbjct: 291 LITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKA 350
Query: 404 IDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF--QIMTGVFDIEPLPEHYACI 461
I++F M ++ L F VL AC+ V G + G F + + +
Sbjct: 351 IEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE---SAL 403
Query: 462 VDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVE 504
+DL G++G ++ A S + + + TW ++L+A +G E
Sbjct: 404 IDLYGKSGCIDSA-SRVYSKMSIRNMITWNAMLSALAQNGRGE 445
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 263/480 (54%), Gaps = 22/480 (4%)
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
PS T+ ++ CG ++ + +VH ++ +G + + T L+GMY+ G V AR V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 181 FDGMDDRDVVAWTAM-----ICGYAKVAMMVEARWLFDNMG-ERNSFTWTTM----VAGY 230
FD R + W A+ + G+ + + + W + +G E + FT+T + VA
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGL--YWKMNRIGVESDRFTYTYVLKACVASE 192
Query: 231 ASCGDMKAAKELYDVMSDKDGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTW 286
+ + KE++ ++ + + V ++ Y + G V A +F G+PV ++ +W
Sbjct: 193 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV-RNVVSW 251
Query: 287 AAMLACYAQNGYAKEGIEMFKEV-RQAK-IKITEVAMVGAISACAQLRDIRMSNALTDHI 344
+AM+ACYA+NG A E + F+E+ R+ K V MV + ACA L + + +I
Sbjct: 252 SAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI 311
Query: 345 EEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAI 404
D L V +AL+ M+ +CG +++ R F M RD+ +++++I+++ HG + AI
Sbjct: 312 LRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAI 371
Query: 405 DLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDL 464
+F M G P VTF+ VL ACS GLVEEG R F+ M I+P EHYAC+VDL
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDL 431
Query: 465 LGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTY 524
LGRA +L+ A ++++ T WGSLL +CR+HGNVEL E A+R L ++P+++G Y
Sbjct: 432 LGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNY 491
Query: 525 VLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREISRQQTADSIKKKHFNLLAD 584
VLLA++YA W + VKKL+ +G++K G W++ R++ + FN L +
Sbjct: 492 VLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWME---VRRKMYSFVSVDEFNPLME 548
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 146/288 (50%), Gaps = 17/288 (5%)
Query: 57 LLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQ 116
L +++ S+ ++ YA K+FD ++W +L RA L+ H + Y +M++
Sbjct: 114 LATKLIGMYSDLGSVDYARKVFDKTRK-RTIYVWNALFRA-LTLAGHGEEVLGLYWKMNR 171
Query: 117 SGVLPSGFTFSSVLNAC----GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
GV FT++ VL AC V +++GK++H L + G+ + + T L+ MYA+ G
Sbjct: 172 IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG 231
Query: 173 CVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM------GERNSFTWTTM 226
CV A VF GM R+VV+W+AMI YAK EA F M NS T ++
Sbjct: 232 CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291
Query: 227 VAGYASCGDMKAAKEL--YDVMSDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQD 282
+ AS ++ K + Y + D + V A++ YG+ G + +R+FD + +D
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH-DRD 350
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQ 330
+W ++++ Y +GY K+ I++F+E+ T V V + AC+
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSH 398
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/514 (31%), Positives = 277/514 (53%), Gaps = 22/514 (4%)
Query: 66 SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFT 125
+E+ N+ LF+ + D F W S+I A L+ + ++ M + + P+ +
Sbjct: 23 TERQNLT---TLFNRYVDKTDVFSWNSVI-ADLARSGDSAEALLAFSSMRKLSLYPTRSS 78
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD 185
F + AC + + GKQ H + G+ + V +AL+ MY+ G + DAR VFD +
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 186 DRDVVAWTAMICGYAKVAMMVEARWLF-----DNMGERNSFTWTTM--VAGYASCGDMKA 238
R++V+WT+MI GY ++A LF D + ++ +M V+ ++C + A
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA 198
Query: 239 AKELYDVMS-------DKDGVTWVAMIAGYGK--LGNVTEARRLFDGIPVPQDASTWAAM 289
+ S D+ ++ Y K G V AR++FD I V +D ++ ++
Sbjct: 199 KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI-VDKDRVSYNSI 257
Query: 290 LACYAQNGYAKEGIEMFKE-VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC 348
++ YAQ+G + E E+F+ V+ + + + + A + +R+ + D +
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 349 CDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFF 408
+ +IV ++I+M+ KCG ++ A + F M+ +++ +++AMI + HG + A++LF
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 409 RMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRA 468
M G++PN +TF+ VL ACS +GL EG R+F M G F +EP EHY C+VDLLGRA
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLA 528
G L++AY LI+ D+ W SLLAACR+H NVEL E + L E+D + G Y+LL+
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 529 NMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
++YA +W E V+ +M +G+ KP G+S ++
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLE 531
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 275/507 (54%), Gaps = 14/507 (2%)
Query: 67 EKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTF 126
E + Y+ LF ++ P+ + + +IR + +S Y RM SG+ P FT+
Sbjct: 77 ELGDFNYSSFLF-SVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTY 135
Query: 127 SSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDD 186
+ V AC ++ + G+ VH L + G + + +L+ MYAK G V AR +FD + +
Sbjct: 136 NFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITE 195
Query: 187 RDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKEL 242
RD V+W +MI GY++ +A LF M E + T +M+ + GD++ + L
Sbjct: 196 RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255
Query: 243 YDV-MSDKDGVTWV---AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGY 298
++ ++ K G++ +I+ YGK G++ ARR+F+ + + +D W AM+ Y+QNG
Sbjct: 256 EEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM-IKKDRVAWTAMITVYSQNGK 314
Query: 299 AKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNA 358
+ E ++F E+ + + + +SAC + + + + H E + V+
Sbjct: 315 SSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATG 374
Query: 359 LINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
L++M+ KCG ++ A R F M ++ T++AMITA+A G +++A+ LF RM + P+
Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPS 431
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLI 478
+TFIGVL+AC +GLV +GCR+F M+ +F + P EHY I+DLL RAG L+ A+ +
Sbjct: 432 DITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFM 491
Query: 479 KENATSADATTWGSLLAACRVHGNVELGETAARHLLEI-DPEDSGTYVLLANMYASQDKW 537
+ D ++L AC +V + E A R L+E+ + +++G YV+ +N+ A W
Sbjct: 492 ERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMW 551
Query: 538 VGAEVVKKLMSKKGIKKPSGYSWIQRE 564
+ ++ LM +G+ K G SWI+ E
Sbjct: 552 DESAKMRALMRDRGVVKTPGCSWIEIE 578
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 159/509 (31%), Positives = 282/509 (55%), Gaps = 23/509 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A+K+FD+MP + W++L+ + + + +S ++ M + G+ P+ FTFS+ L AC
Sbjct: 60 AYKVFDSMPE-RNVVSWSALMSGHVLN-GDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC 117
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
G + A+ +G Q+HG ++ GF V +L+ MY+K G + +A VF + DR +++W
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 194 AMICGYAKVAMMVEARWLFDNMGERN------SFTWTTMVAGYASCGDMKAAKELYDVM- 246
AMI G+ +A F M E N FT T+++ +S G + A K+++ +
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 247 -----SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKE 301
+++ Y K G + AR+ FD I + +W++++ YAQ G E
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLILGYAQEGEFVE 296
Query: 302 GIEMFKEVRQAKIKITEVAM---VGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNA 358
+ +FK +++ +I A+ +G + A LR + AL + G L N+
Sbjct: 297 AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL---NS 353
Query: 359 LINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
+++M+ KCG +D A + F+ M+ +D+ +++ +IT + +HG + ++ +F+ M + ++P+
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 413
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLI 478
+V ++ VL+ACS SG+++EG F + I+P EHYAC+VDLLGRAG+L+ A LI
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLI 473
Query: 479 KENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWV 538
+ W +LL+ CRVHG++ELG+ + LL ID ++ YV+++N+Y W
Sbjct: 474 DTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWN 533
Query: 539 GAEVVKKLMSKKGIKKPSGYSW--IQREI 565
++L + KG+KK +G SW I+RE+
Sbjct: 534 EQGNARELGNIKGLKKEAGMSWVEIEREV 562
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 202/449 (44%), Gaps = 35/449 (7%)
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
S+L C R +G QVH L++SG G N I L+ MY K A VFD M +R
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELY 243
+VV+W+A++ G+ + + LF MG + N FT++T + +CG + A ++
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNL---KACGLLNALEKGL 127
Query: 244 DV----------MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACY 293
+ M + G + V M Y K G + EA ++F I V + +W AM+A +
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDM---YSKCGRINEAEKVFRRI-VDRSLISWNAMIAGF 183
Query: 294 AQNGYAKEGIEMFKEVRQAKIK--ITEVAMVGAISACAQLRDIRMSNALTDHIEEGC--C 349
GY + ++ F +++A IK E + + AC+ I + + C
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFR 409
+ ++ +L++++ KCG + A + F ++ + M ++S++I +A+ G+ +A+ LF R
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 410 MPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAG 469
+ + + + ++ + L+ +G + Q + +VD+ + G
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 470 QLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE-----IDPEDSGTY 524
++ A E D +W ++ HG LG+ + R E I+P++
Sbjct: 363 LVDEAEKCFAEMQLK-DVISWTVVITGYGKHG---LGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 525 VLLANMYASQDKWVGAEVVKKLMSKKGIK 553
+L+ S G E+ KL+ GIK
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIK 447
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 270/498 (54%), Gaps = 12/498 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A K+FD M D W S+I ++S+ +S + +M SG+ T SV C
Sbjct: 249 ARKVFDEMTE-RDVISWNSIINGYVSN-GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGC 306
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ G+ VH V++ F LL MY+K G + A+ VF M DR VV++T
Sbjct: 307 ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
+MI GYA+ + EA LF+ M E + +T T ++ A + K +++ + +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426
Query: 250 D-GVTWV---AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
D G A++ Y K G++ EA +F + V +D +W ++ Y++N YA E + +
Sbjct: 427 DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV-KDIISWNTIIGGYSKNCYANEALSL 485
Query: 306 FKEVRQAK-IKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
F + + K E + + ACA L + +I V+N+L++M++
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
KCG + LA F + +D+ +++ MI + HG ++AI LF +M + G++ ++++F+
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 425 VLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
+L ACS SGLV+EG RFF IM IEP EHYACIVD+L R G L +AY I+
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665
Query: 485 ADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVK 544
DAT WG+LL CR+H +V+L E A + E++PE++G YVL+AN+YA +KW + ++
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725
Query: 545 KLMSKKGIKKPSGYSWIQ 562
K + ++G++K G SWI+
Sbjct: 726 KRIGQRGLRKNPGCSWIE 743
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 218/474 (45%), Gaps = 88/474 (18%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++FD + A W L+ L+ F I + +M SGV +TFS V +
Sbjct: 148 ASRVFDEVK-IEKALFWNILMNE-LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSF 205
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ ++ G+Q+HG +++SGFG V +L+ Y K+ V AR VFD M +RDV++W
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265
Query: 194 AMICGYAK-----------VAMMV------------------EARWL-----FDNMGERN 219
++I GY V M+V ++R + ++G +
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325
Query: 220 SFT-----WTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLF 274
F+ T++ Y+ CGD+ +AK ++ MSD+ V++ +MIAGY + G EA +LF
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 275 DGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQL 331
+ + + D T A+L C CA+
Sbjct: 386 EEMEEEGISPDVYTVTAVLNC-----------------------------------CARY 410
Query: 332 RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMI 391
R + + + I+E + VSNAL++M++KCG++ A FS MR +D+ +++ +I
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTII 470
Query: 392 TAFAEHGKSQDAIDLF-FRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRF--FQIMTGV 448
++++ + +A+ LF + ++ P++ T VL AC+S ++G + + G
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Query: 449 FDIEPLPEHYA-CIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
F H A +VD+ + G L A+ L ++ S D +W ++A +HG
Sbjct: 531 FS----DRHVANSLVDMYAKCGALLLAHMLF-DDIASKDLVSWTVMIAGYGMHG 579
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 185/384 (48%), Gaps = 19/384 (4%)
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
T SVL C ++ +GK+V + +GF + + + L MY G + +A VFD +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAK 240
+ W ++ AK + LF M E +S+T++ + ++S + +
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 241 ELYDVM-----SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQ 295
+L+ + +++ V +++A Y K V AR++FD + +D +W +++ Y
Sbjct: 216 QLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEM-TERDVISWNSIINGYVS 273
Query: 296 NGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIV 355
NG A++G+ +F ++ + I+I +V + CA R I + A+ + C R
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 356 SNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
N L++M+SKCG++D A F M R + +Y++MI +A G + +A+ LF M +EG+
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 416 KPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV---FDIEPLPEHYACIVDLLGRAGQLE 472
P+ T VLN C+ L++EG R + + FDI ++D+ + G ++
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV----SNALMDMYAKCGSMQ 449
Query: 473 RAYSLIKENATSADATTWGSLLAA 496
A L+ D +W +++
Sbjct: 450 EA-ELVFSEMRVKDIISWNTIIGG 472
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 268/498 (53%), Gaps = 12/498 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A KLF M D W +I ++ ++ + M SGVLP TFSS+L +
Sbjct: 293 ASKLFRMMSR-ADTVTWNCMISGYV-QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ + KQ+H +++ + + +AL+ Y K V A+++F + DVV +T
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 194 AMICGYAKVAMMVEA----RWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS-- 247
AMI GY + +++ RWL N T +++ +K +EL+ +
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 248 --DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
D A+I Y K G + A +F+ + +D +W +M+ AQ+ I++
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
F+++ + I V++ A+SACA L A+ + + + + LI+M++K
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAK 589
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM-PKEGLKPNQVTFIG 424
CGN+ A F TM+ +++ +++++I A HGK +D++ LF M K G++P+Q+TF+
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649
Query: 425 VLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
++++C G V+EG RFF+ MT + I+P EHYAC+VDL GRAG+L AY +K
Sbjct: 650 IISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFP 709
Query: 485 ADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVK 544
DA WG+LL ACR+H NVEL E A+ L+++DP +SG YVL++N +A+ +W V+
Sbjct: 710 PDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVR 769
Query: 545 KLMSKKGIKKPSGYSWIQ 562
LM ++ ++K GYSWI+
Sbjct: 770 SLMKEREVQKIPGYSWIE 787
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 208/449 (46%), Gaps = 19/449 (4%)
Query: 67 EKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTF 126
E I KLFD + D IW ++ + A I ++ M + P+ TF
Sbjct: 185 EYGKIDVPSKLFDRVLQ-KDCVIWNVMLNGYAKCGA-LDSVIKGFSVMRMDQISPNAVTF 242
Query: 127 SSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDD 186
VL+ C + G Q+HG +V SG ++ +LL MY+K G DA +F M
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 187 RDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKEL 242
D V W MI GY + +M E+ F M ++ T+++++ + +++ K++
Sbjct: 303 ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQI 362
Query: 243 YDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGY 298
+ + D A+I Y K V+ A+ +F D + AM++ Y NG
Sbjct: 363 HCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN-SVDVVVFTAMISGYLHNGL 421
Query: 299 AKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNA 358
+ +EMF+ + + KI E+ +V + L +++ L I + D + A
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 359 LINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
+I+M++KCG ++LA+ F + RD+ ++++MIT A+ AID+F +M G+ +
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYD 541
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHY---ACIVDLLGRAGQLERAY 475
V+ L+AC++ L E F + + G L + ++D+ + G L+ A
Sbjct: 542 CVSISAALSACAN--LPSES--FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597
Query: 476 SLIKENATSADATTWGSLLAACRVHGNVE 504
++ K + +W S++AAC HG ++
Sbjct: 598 NVFK-TMKEKNIVSWNSIIAACGNHGKLK 625
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 11/315 (3%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD 185
S +L AC + +GKQVH L+ + G+ +LGMYA G D +F +D
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 186 DR--DVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAA 239
R + W ++I + + ++ +A + M + T+ +V + + K
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 240 KELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQ 295
L D +S D + ++I Y + G + +LFD + + +D W ML YA+
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLNGYAK 216
Query: 296 NGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIV 355
G I+ F +R +I V +S CA I + L + D +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 356 SNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
N+L++M+SKCG D A + F M D T++ MI+ + + G ++++ F+ M G+
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 416 KPNQVTFIGVLNACS 430
P+ +TF +L + S
Sbjct: 337 LPDAITFSSLLPSVS 351
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 120/260 (46%), Gaps = 12/260 (4%)
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDA-STWAAMLACYAQNGYAKEGIEMFKE 308
D T ++ Y G+ ++ ++F + + + + W ++++ + +NG + + + +
Sbjct: 69 DSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFK 128
Query: 309 VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGN 368
+ + + AC L++ + + L+D + D V+++LI + + G
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 369 IDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNA 428
ID+ + F + +D ++ M+ +A+ G I F M + + PN VTF VL+
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 429 CSSSGLVEEGCRF--FQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSAD 486
C+S L++ G + +++GV D E ++ ++ + + G+ + A L + + AD
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGV-DFEGSIKN--SLLSMYSKCGRFDDASKLFRM-MSRAD 304
Query: 487 ATTWGSLLAACRVHGNVELG 506
TW C + G V+ G
Sbjct: 305 TVTWN-----CMISGYVQSG 319
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 258/456 (56%), Gaps = 25/456 (5%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD 185
+ ++LNAC A+ +G++VH ++++ + ++T LL Y K C+ DAR V D M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 186 DRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKE 241
+++VV+WTAMI Y++ EA +F M G+ N FT+ T++ + K+
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 242 LYDVMS--DKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
++ ++ + D +V +++ Y K G + EAR +F+ +P +D + A++A YAQ G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAGYAQLG 233
Query: 298 YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD---RTL- 353
+E +EMF + + V ++A + L AL DH ++ C R L
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGL-------ALLDHGKQAHCHVLRRELP 286
Query: 354 ---IVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
++ N+LI+M+SKCGN+ A R F M R +++AM+ +++HG ++ ++LF M
Sbjct: 287 FYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM 346
Query: 411 PKEG-LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMT-GVFDIEPLPEHYACIVDLLGRA 468
E +KP+ VT + VL+ CS + + G F M G + +P EHY CIVD+LGRA
Sbjct: 347 RDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRA 406
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLA 528
G+++ A+ IK + A GSLL ACRVH +V++GE+ R L+EI+PE++G YV+L+
Sbjct: 407 GRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILS 466
Query: 529 NMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
N+YAS +W V+ +M +K + K G SWIQ E
Sbjct: 467 NLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHE 502
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 159/285 (55%), Gaps = 12/285 (4%)
Query: 57 LLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQ 116
L R+L F + + A K+ D MP + WT++I + S H ++ +A M +
Sbjct: 89 LRTRLLIFYGKCDCLEDARKVLDEMPE-KNVVSWTAMISRY-SQTGHSSEALTVFAEMMR 146
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
S P+ FTF++VL +C R + GKQ+HG +V+ + + V ++LL MYAK+G + +
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYAS 232
AR++F+ + +RDVV+ TA+I GYA++ + EA +F + N T+ +++ +
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266
Query: 233 CGDMKAAKELYDVMSDKD----GVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAA 288
+ K+ + + ++ V ++I Y K GN++ ARRLFD +P + A +W A
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNA 325
Query: 289 MLACYAQNGYAKEGIEMFKEVR-QAKIKITEVAMVGAISACAQLR 332
ML Y+++G +E +E+F+ +R + ++K V ++ +S C+ R
Sbjct: 326 MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/485 (31%), Positives = 262/485 (54%), Gaps = 12/485 (2%)
Query: 90 WTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRL 149
W +R L++++ F IS Y M +SG P F+F +L +C + V G+Q+H +
Sbjct: 21 WNVRLRE-LAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 150 VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFD--GMDDRDVVAWTAMICGYAKVAMMVE 207
+ G V TAL+ MY K G V DAR VF+ + V + A+I GY + + +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 208 ARWLFDNMGERN-SFTWTTMVAGYASCGDMK---AAKELYDVMS----DKDGVTWVAMIA 259
A ++F M E S TM+ C + + L+ D + + I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 260 GYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEV 319
Y K G+V RRLFD +PV + TW A+++ Y+QNG A + +E++++++ + +
Sbjct: 200 MYMKCGSVEAGRRLFDEMPV-KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 320 AMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM 379
+V +S+CA L ++ + + +E + VSNA I+M+++CGN+ A F M
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 380 RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGC 439
+ + +++AMI + HG + + LF M K G++P+ F+ VL+ACS SGL ++G
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 440 RFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRV 499
F+ M + +EP PEHY+C+VDLLGRAG+L+ A I+ D WG+LL AC++
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 500 HGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYS 559
H NV++ E A ++E +P + G YVL++N+Y+ G ++ +M ++ +K GYS
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Query: 560 WIQRE 564
+++ +
Sbjct: 499 YVEHK 503
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
++ W L A E I +++ + ++ + + +CA L L
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF--STMRCRDMYTYSAMITAFAEHGKS 400
H+ +G C+ V ALI+M+ KCG + A + F + + Y+A+I+ + + K
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 401 QDAIDLFFRMPKEGLKPNQVTFIGVLNACS 430
DA +F RM + G+ + VT +G++ C+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCT 167
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 273/524 (52%), Gaps = 24/524 (4%)
Query: 53 FLSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAF-----LSHRAHFRHC 107
FLS LL R +++ YA +L + +W SLI F L+ R F
Sbjct: 37 FLSRLLRRCCTAATQ---FRYARRLLCQLQTLSIQ-LWDSLIGHFSGGITLNRRLSFL-- 90
Query: 108 ISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGM 167
Y M ++GV+PS TF +L A ++ Q H +V+ G + V+ +L+
Sbjct: 91 --AYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISG 147
Query: 168 YAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTW 223
Y+ SG A +FDG +D+DVV WTAMI G+ + EA F M + N T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 224 TTMVAGYASCGDMKAAKELYDVMSDK-----DGVTWVAMIAGYGKLGNVTEARRLFDGIP 278
+++ D++ + ++ + + D +++ YGK +A+++FD +P
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 279 VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSN 338
++ TW A++A Y Q+ +G+ +F+E+ ++ + E + +SACA + +
Sbjct: 268 -SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGR 326
Query: 339 ALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHG 398
+ ++ + + LI+++ KCG ++ A F + +++YT++AMI FA HG
Sbjct: 327 RVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 399 KSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHY 458
++DA DLF+ M + PN+VTF+ VL+AC+ GLVEEG R F M G F++EP +HY
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 459 ACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDP 518
AC+VDL GR G LE A +LI+ WG+L +C +H + ELG+ AA ++++ P
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQP 506
Query: 519 EDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
SG Y LLAN+Y+ W V+K M + + K G+SWI+
Sbjct: 507 SHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 268/547 (48%), Gaps = 80/547 (14%)
Query: 95 RAFLSH---RAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQ 151
++FLS +A +S + Q G+ +S+L CG ++ +GK +H L
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 152 SGFG-GNKIVQTALLGMY-------------------------------AKSGCVCDARD 179
+GF N ++ L+GMY KSG + AR
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWT----------- 224
VFD M +RDVV+W M+ GYA+ + EA W + N F++
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 225 ----------TMVAG--------------YASCGDMKAAKELYDVMSDKDGVTWVAMIAG 260
+VAG YA CG M++AK +D M+ KD W +I+G
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 261 YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVA 320
Y KLG++ A +LF +P ++ +W A++A Y + G +++F+++ +K +
Sbjct: 255 YAKLGDMEAAEKLFCEMP-EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 321 MVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMR 380
+ A A + +R + ++ IV ++LI+M+SK G+++ + R F
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRI-- 371
Query: 381 CRDMYT---YSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEE 437
C D + ++ MI+A A+HG A+ + M K ++PN+ T + +LNACS SGLVEE
Sbjct: 372 CDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEE 431
Query: 438 GCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAAC 497
G R+F+ MT I P EHYAC++DLLGRAG + I+E D W ++L C
Sbjct: 432 GLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVC 491
Query: 498 RVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSG 557
R+HGN ELG+ AA L+++DPE S Y+LL+++YA KW E ++ +M K+ + K
Sbjct: 492 RIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKA 551
Query: 558 YSWIQRE 564
SWI+ E
Sbjct: 552 VSWIEIE 558
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 134/296 (45%), Gaps = 41/296 (13%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A +FD+MP D W +++ + + + + Y +SG+ + F+F+ +L AC
Sbjct: 132 ARVVFDSMPE-RDVVSWNTMVIGY-AQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTAC 189
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ + +Q HG+++ +GF N ++ +++ YAK G + A+ FD M +D+ WT
Sbjct: 190 VKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT 249
Query: 194 AMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGY----------------------- 230
+I GYAK+ M A LF M E+N +WT ++AGY
Sbjct: 250 TLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKP 309
Query: 231 ------------ASCGDMKAAKELYDVM----SDKDGVTWVAMIAGYGKLGNVTEARRLF 274
AS ++ KE++ M + + ++I Y K G++ + R+F
Sbjct: 310 EQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF 369
Query: 275 DGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQ 330
D W M++ AQ+G + + M ++ + +++ +V ++AC+
Sbjct: 370 RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSH 425
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 271/544 (49%), Gaps = 57/544 (10%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM-HQSGVLPSGFTFSSVLNA 132
A K+FD M + D W S+I ++ + + + ++RM ++ G P T +VL
Sbjct: 181 ARKVFDEM-SVWDVVSWNSIIESY-AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
C + GKQ+H V S N V L+ MYAK G + +A VF M +DVV+W
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 193 TAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYA----------------- 231
AM+ GY+++ +A LF+ M E + TW+ ++GYA
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 232 ------------------SCGDMKAAKEL------YDVMSDKDG-----VTWVAMIAGYG 262
S G + KE+ Y + K+G + +I Y
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 263 KLGNVTEARRLFDGI-PVPQDASTWAAMLACYAQNGYAKEGIEMFKEV--RQAKIKITEV 319
K V AR +FD + P +D TW M+ Y+Q+G A + +E+ E+ + +
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 320 AMVGAISACAQLRDIRMSNALTDHIEEGCCDRT-LIVSNALINMHSKCGNIDLAWREFST 378
+ A+ ACA L +R+ + + + L VSN LI+M++KCG+I A F
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 379 MRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
M ++ T+++++T + HG ++A+ +F M + G K + VT + VL ACS SG++++G
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 439 CRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACR 498
+F M VF + P PEHYAC+VDLLGRAG+L A LI+E W + L+ CR
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCR 658
Query: 499 VHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGY 558
+HG VELGE AA + E+ G+Y LL+N+YA+ +W ++ LM KG+KK G
Sbjct: 659 IHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGC 718
Query: 559 SWIQ 562
SW++
Sbjct: 719 SWVE 722
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 217/476 (45%), Gaps = 60/476 (12%)
Query: 82 PNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVE 141
P+ + W SLIR++ C+ + MH P +TF V ACG + ++
Sbjct: 87 PSDAGVYHWNSLIRSY-GDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 142 GKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAK 201
G+ H + +GF N V AL+ MY++ + DAR VFD M DVV+W ++I YAK
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 202 VAMMVEARWLFDNMGE----------------------------------------RNSF 221
+ A +F M +N F
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 222 TWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGI---P 278
+V YA CG M A ++ MS KD V+W AM+AGY ++G +A RLF+ +
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 279 VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSN 338
+ D TW+A ++ YAQ G E + + +++ + IK EV ++ +S CA + +
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 339 AL--------TDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM--RCRDMYTYS 388
+ D + G D +++ N LI+M++KC +D A F ++ + RD+ T++
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEG--LKPNQVTFIGVLNACSSSGLVEEGCRFFQI-M 445
MI +++HG + A++L M +E +PN T L AC+S + G + +
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 446 TGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
+ PL C++D+ + G + A L+ +N + + TW SL+ +HG
Sbjct: 505 RNQQNAVPLFVS-NCLIDMYAKCGSISDA-RLVFDNMMAKNEVTWTSLMTGYGMHG 558
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 22/259 (8%)
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDAST--WAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
+I+ Y +G ++ A L P P DA W +++ Y NG A + + +F +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFP-PSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSW 123
Query: 315 KITEVAMVGAISACAQLRDIRMSNA------LTDHIEEGCCDRTLIVSNALINMHSKCGN 368
AC ++ +R + +T I + V NAL+ M+S+C +
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFIS------NVFVGNALVAMYSRCRS 177
Query: 369 IDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE-GLKPNQVTFIGVLN 427
+ A + F M D+ +++++I ++A+ GK + A+++F RM E G +P+ +T + VL
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 428 ACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYA--CIVDLLGRAGQLERAYSLIKENATSA 485
C+S G G Q+ E + + C+VD+ + G ++ A ++ N +
Sbjct: 238 PCASLGTHSLG---KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVF-SNMSVK 293
Query: 486 DATTWGSLLAACRVHGNVE 504
D +W +++A G E
Sbjct: 294 DVVSWNAMVAGYSQIGRFE 312
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 251/474 (52%), Gaps = 35/474 (7%)
Query: 65 SSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGF 124
+ E + YAH + + + P+ F S+IRA+ ++ + ++ + M V P +
Sbjct: 84 NPEPKTVSYAHSILNRI-GSPNGFTHNSVIRAY-ANSSTPEVALTVFREMLLGPVFPDKY 141
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
+F+ VL AC EG+Q+HG ++SG + V+ L+ +Y +SG AR V D M
Sbjct: 142 SFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM 201
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYD 244
RD V +W ++++ Y G + A+ L+D
Sbjct: 202 PVRDAV-------------------------------SWNSLLSAYLEKGLVDEARALFD 230
Query: 245 VMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
M +++ +W MI+GY G V EA+ +FD +PV +D +W AM+ YA G E +E
Sbjct: 231 EMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPV-RDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 305 MF-KEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMH 363
+F K + + K +V +SACA L + + +I++ + ++ AL++M+
Sbjct: 290 VFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMY 349
Query: 364 SKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFI 423
SKCG ID A F RD+ T++++I+ + HG +DA+++F M EG KPN +TFI
Sbjct: 350 SKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFI 409
Query: 424 GVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT 483
GVL+AC+ G++++ + F++M+ V+ +EP EHY C+VDLLGR G++E A L+ E
Sbjct: 410 GVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPA 469
Query: 484 SADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKW 537
+ SLL AC+ G +E E A LLE++ DS Y ++N+YAS +W
Sbjct: 470 DEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRW 523
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 270/505 (53%), Gaps = 24/505 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A+K+FD M + WT +I + R I + M SG FT SSV +AC
Sbjct: 222 AYKVFDKMSEL-NVVTWTLMITRCM-QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK---SGCVCDARDVFDGMDDRDVV 190
+ + GKQ+H ++SG + V+ +L+ MYAK G V D R VFD M+D V+
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 191 AWTAMICGYAK-VAMMVEARWLFDNM-----GERNSFTWTTMVAGYASCGDMKAAKELYD 244
+WTA+I GY K + EA LF M E N FT+++ + +CG++ +
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS---AFKACGNLSDPRVGKQ 394
Query: 245 VMSD--KDGVTWVAMIAG-----YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
V+ K G+ + +A + K + +A+R F+ + ++ ++ L +N
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCRNL 453
Query: 298 YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSN 357
++ ++ E+ + ++ ++ +S A + IR + + + V N
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 358 ALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKP 417
ALI+M+SKCG+ID A R F+ M R++ ++++MIT FA+HG + ++ F +M +EG+KP
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 418 NQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL 477
N+VT++ +L+ACS GLV EG R F M I+P EHYAC+VDLL RAG L A+
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 478 IKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKW 537
I AD W + L ACRVH N ELG+ AAR +LE+DP + Y+ L+N+YA KW
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 538 VGAEVVKKLMSKKGIKKPSGYSWIQ 562
+ +++ M ++ + K G SWI+
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIE 718
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 163/346 (47%), Gaps = 24/346 (6%)
Query: 104 FRHCISTYARMHQSGVLP-SGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQT 162
R +S M + G+ P TFSS+L +C R GK VH RL++ + ++
Sbjct: 42 LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 163 ALLGMYAKSGCVCDARDVFDGM---DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGE-- 217
+L+ +Y+KSG A DVF+ M RDVV+W+AM+ Y ++A +F E
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 218 --RNSFTWTTMV-----AGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTE- 269
N + +T ++ + + G + + + D ++I + K N E
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 270 ARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACA 329
A ++FD + + TW M+ Q G+ +E I F ++ + + + + SACA
Sbjct: 222 AYKVFDKMS-ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 330 QLRDIRMSNALTD-HIEEGCCDRTLIVSNALINMHSKC---GNIDLAWREFSTMRCRDMY 385
+L ++ + L I G D V +L++M++KC G++D + F M +
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 386 TYSAMITAFAEH-GKSQDAIDLFFRMPKEG-LKPNQVTFIGVLNAC 429
+++A+IT + ++ + +AI+LF M +G ++PN TF AC
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 11/190 (5%)
Query: 319 VAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFST 378
V + +C + RD R+ + + E + ++ N+LI+++SK G+ A F T
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 379 MR---CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLV 435
MR RD+ ++SAM+ + +G+ DAI +F + GL PN + V+ ACS+S V
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
Query: 436 EEG--CRFFQIMTGVFDIEPLPEHYAC-IVDLLGRA-GQLERAYSLIKENATSADATTWG 491
G F + TG F+ + C ++D+ + E AY + + + + TW
Sbjct: 183 GVGRVTLGFLMKTGHFESDVC---VGCSLIDMFVKGENSFENAYKVF-DKMSELNVVTWT 238
Query: 492 SLLAACRVHG 501
++ C G
Sbjct: 239 LMITRCMQMG 248
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/571 (29%), Positives = 279/571 (48%), Gaps = 89/571 (15%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A + ++P+ P + ++SLI A L+ F I ++RM G++P ++ C
Sbjct: 69 ADLVLQSIPD-PTIYSFSSLIYA-LTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ A GKQ+H SG + VQ ++ MY + G + DAR VFD M D+DVV +
Sbjct: 127 AELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCS 186
Query: 194 AMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGY------------------- 230
A++C YA+ + E + M E N +W +++G+
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL 246
Query: 231 ASCGDMKAAKELYDVMSD--------------------KDGVTWVAMIAGYGKLGNV--- 267
C D + + D KD AMI YGK G+V
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306
Query: 268 -------------------------------TEARRLFDGIPVPQDASTWAAMLACYAQN 296
E LF + + +W +++A AQN
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN 366
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
G E +E+F+E++ A +K V + + AC + + + + H G R ++
Sbjct: 367 GKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA--ALGHGRSTH---GFAVRVHLLD 421
Query: 357 N-----ALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
N ALI+M++KCG I+L+ F+ M +++ +++++ F+ HGK+++ + +F +
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 412 KEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQL 471
+ LKP+ ++F +L+AC GL +EG ++F++M+ + I+P EHY+C+V+LLGRAG+L
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKL 541
Query: 472 ERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMY 531
+ AY LIKE D+ WG+LL +CR+ NV+L E AA L ++PE+ GTYVLL+N+Y
Sbjct: 542 QEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIY 601
Query: 532 ASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
A++ W + ++ M G+KK G SWIQ
Sbjct: 602 AAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/441 (19%), Positives = 181/441 (41%), Gaps = 85/441 (19%)
Query: 144 QVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVA 203
Q H R+++SG + + L+ Y+ C DA V + D + +++++I K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 204 MMVEARWLFDNM---------------------------GER------------NSFTWT 224
+ ++ +F M G++ ++F
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 225 TMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIP---VPQ 281
+M Y CG M A++++D MSDKD VT A++ Y + G + E R+ + +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
+ +W +L+ + ++GY KE + MF+++ +V + + + + M +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 342 DH-IEEGCCDRTLIVSNALINMHSKCGN-------------------------------I 369
+ I++G ++S A+I+M+ K G+ +
Sbjct: 276 GYVIKQGLLKDKCVIS-AMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 370 DLAWREFSTMRCRDM----YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
D A F + + M +++++I A++GK +A++LF M G+KPN VT +
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 426 LNACSSSGLVEEG--CRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT 483
L AC + + G F + + D + + ++D+ + G++ + ++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVG---SALIDMYAKCGRINLS-QIVFNMMP 450
Query: 484 SADATTWGSLLAACRVHGNVE 504
+ + W SL+ +HG +
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAK 471
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 244/474 (51%), Gaps = 41/474 (8%)
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
T SVL +C + + +H +++++ + V L+ + + V A DVF +
Sbjct: 31 TLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 185 DDRDVVAWTAMICGYA------------------------------------KVAMMVEA 208
+ +V +TAMI G+ KV + A
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 209 RWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVT 268
+ L G S M+ Y G++ AK+++D M D+D V MI Y + G +
Sbjct: 148 QVLKLGFGSSRS-VGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIK 206
Query: 269 EARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISAC 328
EA LF + + +D W AM+ +N + +E+F+E++ + E V +SAC
Sbjct: 207 EALELFQDVKI-KDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Query: 329 AQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYS 388
+ L + + + +E + + V NALINM+S+CG+I+ A R F MR +D+ +Y+
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYN 325
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV 448
MI+ A HG S +AI+ F M G +PNQVT + +LNACS GL++ G F M V
Sbjct: 326 TMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRV 385
Query: 449 FDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGET 508
F++EP EHY CIVDLLGR G+LE AY I+ D G+LL+AC++HGN+ELGE
Sbjct: 386 FNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEK 445
Query: 509 AARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
A+ L E + DSGTYVLL+N+YAS KW + +++ M GI+K G S I+
Sbjct: 446 IAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 198/435 (45%), Gaps = 69/435 (15%)
Query: 50 YHHFLSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCIS 109
+H + ++ ++ S ++ YA+ +F + N P+ +++T++I F+S +S
Sbjct: 56 FHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSN-PNVYLYTAMIDGFVS-SGRSADGVS 113
Query: 110 TYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYA 169
Y RM + VLP + +SVL AC + +++H ++++ GFG ++ V ++ +Y
Sbjct: 114 LYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYG 169
Query: 170 KSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAG 229
KSG + +A+ +FD M DRD VA T MI Y++ + EA LF ++ +++ WT M+ G
Sbjct: 170 KSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDG 229
Query: 230 YASCGDMKAAKELYDVM-------------------SDKDGVT---WV------------ 255
+M A EL+ M SD + WV
Sbjct: 230 LVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELS 289
Query: 256 -----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVR 310
A+I Y + G++ EARR+F + +D ++ M++ A +G + E I F+++
Sbjct: 290 NFVGNALINMYSRCGDINEARRVFR-VMRDKDVISYNTMISGLAMHGASVEAINEFRDMV 348
Query: 311 QAKIKITEVAMVGAISACAQ--LRDI---------RMSNALTDHIEEGCCDRTLIVSNAL 359
+ +V +V ++AC+ L DI R+ N GC +
Sbjct: 349 NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGC----------I 398
Query: 360 INMHSKCGNIDLAWREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
+++ + G ++ A+R + D +++A HG + + R+ E P+
Sbjct: 399 VDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRL-FESENPD 457
Query: 419 QVTFIGVLNACSSSG 433
T++ + N +SSG
Sbjct: 458 SGTYVLLSNLYASSG 472
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 261/497 (52%), Gaps = 11/497 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A K+FD MP D W +++ + S R + M + + PS T SVL A
Sbjct: 189 ARKVFDRMPE-RDLVSWNTIVAGY-SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAV 246
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ + GK++HG ++SGF + TAL+ MYAK G + AR +FDGM +R+VV+W
Sbjct: 247 SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWN 306
Query: 194 AMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGY----ASCGDMKAAKELY----DV 245
+MI Y + EA +F M + V G A GD++ + ++ ++
Sbjct: 307 SMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
Query: 246 MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
D++ ++I+ Y K V A +F G + +W AM+ +AQNG + +
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMF-GKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
F ++R +K V I+A A+L + + + C D+ + V+ AL++M++K
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
CG I +A F M R + T++AMI + HG + A++LF M K +KPN VTF+ V
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA 485
++ACS SGLVE G + F +M + IE +HY +VDLLGRAG+L A+ I +
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 486 DATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKK 545
+G++L AC++H NV E AA L E++P+D G +VLLAN+Y + W V+
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 665
Query: 546 LMSKKGIKKPSGYSWIQ 562
M ++G++K G S ++
Sbjct: 666 SMLRQGLRKTPGCSMVE 682
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 211/402 (52%), Gaps = 17/402 (4%)
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK 170
+ RM V P + F+ +L CG + GK++HG LV+SGF + T L MYAK
Sbjct: 123 FVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK 182
Query: 171 SGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERN---SF-TWTTM 226
V +AR VFD M +RD+V+W ++ GY++ M A + +M E N SF T ++
Sbjct: 183 CRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSV 242
Query: 227 VAGYASCGDMKAAKEL--YDVMSDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQD 282
+ ++ + KE+ Y + S D + + A++ Y K G++ AR+LFDG+ + ++
Sbjct: 243 LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERN 301
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
+W +M+ Y QN KE + +F+++ +K T+V+++GA+ ACA L D+ +
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQD 402
E DR + V N+LI+M+ KC +D A F ++ R + +++AMI FA++G+ D
Sbjct: 362 LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPID 421
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHY---A 459
A++ F +M +KP+ T++ V+ A + + + + GV L ++
Sbjct: 422 ALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA----KWIHGVVMRSCLDKNVFVTT 477
Query: 460 CIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
+VD+ + G + A LI + + TTW +++ HG
Sbjct: 478 ALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 191/382 (50%), Gaps = 39/382 (10%)
Query: 78 FDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVP 137
F T+P P+ S R FLS R + I H + +L R
Sbjct: 8 FSTVPQIPNP---PSRHRHFLSERNY----IPANVYEHPAALLLE------------RCS 48
Query: 138 AMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMIC 197
++ E +Q+ + ++G QT L+ ++ + G V +A VF+ +D + V + M+
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 198 GYAKVAMMVEARWLFDNMGERN------SFTWTTMVAGYASCGD---MKAAKELYDVMSD 248
G+AKV+ + +A F M + +FT+ V CGD ++ KE++ ++
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKV-----CGDEAELRVGKEIHGLLVK 163
Query: 249 K----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
D + Y K V EAR++FD +P +D +W ++A Y+QNG A+ +E
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALE 222
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
M K + + +K + + +V + A + LR I + + + D + +S AL++M++
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
KCG+++ A + F M R++ ++++MI A+ ++ ++A+ +F +M EG+KP V+ +G
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 425 VLNACSSSGLVEEGCRFFQIMT 446
L+AC+ G +E G RF ++
Sbjct: 343 ALHACADLGDLERG-RFIHKLS 363
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 112/241 (46%), Gaps = 5/241 (2%)
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKI 316
+++ + + G+V EA R+F+ I + + ML +A+ + ++ F +R ++
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNV-LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEP 133
Query: 317 TEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF 376
+ C ++R+ + + + L L NM++KC ++ A + F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 377 STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
M RD+ +++ ++ ++++G ++ A+++ M +E LKP+ +T + VL A S+ L+
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 437 EGCRFF-QIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLA 495
G M FD L +VD+ + G LE A L + + +W S++
Sbjct: 254 VGKEIHGYAMRSGFD--SLVNISTALVDMYAKCGSLETARQLF-DGMLERNVVSWNSMID 310
Query: 496 A 496
A
Sbjct: 311 A 311
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 254/482 (52%), Gaps = 12/482 (2%)
Query: 90 WTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRL 149
WTSLI L+ HF + + M + GV+P+ FTF A + V GKQ+H
Sbjct: 76 WTSLISG-LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALA 134
Query: 150 VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEAR 209
V+ G + V + MY K+ DAR +FD + +R++ W A I EA
Sbjct: 135 VKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAI 194
Query: 210 WLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTWVAMIAGY 261
F G NS T+ + + + +L+ ++ D D +I Y
Sbjct: 195 EAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY 254
Query: 262 GKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAM 321
GK + + +F + ++A +W +++A Y QN ++ ++ R+ ++ ++ +
Sbjct: 255 GKCKQIRSSEIIFTEMGT-KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI 313
Query: 322 VGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRC 381
+SACA + + + ++ H + C +RT+ V +AL++M+ KCG I+ + + F M
Sbjct: 314 SSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE 373
Query: 382 RDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL--KPNQVTFIGVLNACSSSGLVEEGC 439
+++ T +++I +A G+ A+ LF M G PN +TF+ +L+ACS +G VE G
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 433
Query: 440 RFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRV 499
+ F M + IEP EHY+CIVD+LGRAG +ERAY IK+ + WG+L ACR+
Sbjct: 434 KIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRM 493
Query: 500 HGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYS 559
HG +LG AA +L ++DP+DSG +VLL+N +A+ +W A V++ + GIKK +GYS
Sbjct: 494 HGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYS 553
Query: 560 WI 561
WI
Sbjct: 554 WI 555
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 170/413 (41%), Gaps = 45/413 (10%)
Query: 138 AMVEGKQVHGRLVQS-GFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMI 196
+M G+ VH R+V++ + L+ MY+K AR V R+VV+WT++I
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 197 CGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSD---- 248
G A+ A F M N FT+ AS K+++ +
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
Query: 249 KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE 308
D + Y K +AR+LFD IP ++ TW A ++ +G +E IE F E
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIP-ERNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 309 VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGN 368
R+ + ++AC+ + + L + D + V N LI+ + KC
Sbjct: 200 FRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259
Query: 369 IDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNA 428
I + F+ M ++ ++ +++ A+ ++ + + A L+ R K+ ++ + VL+A
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSA 319
Query: 429 CSSSGLVEEGCRFFQ------IMTGVFDIEPLPEHY---ACIVD---------------- 463
C+ +E G + +F L + Y CI D
Sbjct: 320 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR 379
Query: 464 --LLG---RAGQLERAYSLIKENA-----TSADATTWGSLLAACRVHGNVELG 506
L+G GQ++ A +L +E A + + T+ SLL+AC G VE G
Sbjct: 380 NSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 282/608 (46%), Gaps = 118/608 (19%)
Query: 70 NICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV--LPSGFTFS 127
+I YA KLF+ MP + +IR ++ + IS + RM GV +P G+T+
Sbjct: 64 HITYARKLFEEMPQ-SSLLSYNIVIRMYV-REGLYHDAISVFIRMVSEGVKCVPDGYTYP 121
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGM-------------------- 167
V A G + +M G VHGR+++S FG +K VQ ALL M
Sbjct: 122 FVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR 181
Query: 168 -----------YAKSGCVCDARDVFDGMDDRDV------VAWTAMICG------------ 198
Y ++G + DA +FD M + V + +CG
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVH 241
Query: 199 ---------------------YAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMK 237
Y K M EAR++FD M R+ TWT M+ GY GD++
Sbjct: 242 KLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE 301
Query: 238 AAKELY-----------------------DVMSDKDG----------------VTWVAMI 258
A EL D + DG + ++I
Sbjct: 302 NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLI 361
Query: 259 AGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITE 318
+ Y K V R+F G W+A++A QN + + +FK +R+ ++
Sbjct: 362 SMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420
Query: 319 VAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFST 378
+ + A A L D+R + + ++ + +L + L++++SKCG ++ A + F+
Sbjct: 421 ATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480
Query: 379 M----RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGL 434
+ + +D+ + A+I+ + HG +A+ +F M + G+ PN++TF LNACS SGL
Sbjct: 481 IQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGL 540
Query: 435 VEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLL 494
VEEG F+ M + HY CIVDLLGRAG+L+ AY+LI +T WG+LL
Sbjct: 541 VEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALL 600
Query: 495 AACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKK 554
AAC H NV+LGE AA L E++PE++G YVLLAN+YA+ +W E V+ +M G++K
Sbjct: 601 AACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRK 660
Query: 555 PSGYSWIQ 562
G+S I+
Sbjct: 661 KPGHSTIE 668
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 106/246 (43%), Gaps = 5/246 (2%)
Query: 261 YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVA 320
Y G++T AR+LF+ +P ++ ++ Y + G + I +F + +K
Sbjct: 59 YALCGHITYARKLFEEMP-QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDG 117
Query: 321 MVGAI--SACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFST 378
A +L+ +++ + I R V NAL+ M+ G +++A F
Sbjct: 118 YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV 177
Query: 379 MRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
M+ RD+ +++ MI+ + +G DA+ +F M E + + T + +L C +E G
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 439 CRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACR 498
R + + E +V++ + G+++ A + + D TW ++
Sbjct: 238 -RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA-RFVFDRMERRDVITWTCMINGYT 295
Query: 499 VHGNVE 504
G+VE
Sbjct: 296 EDGDVE 301
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 224/406 (55%), Gaps = 3/406 (0%)
Query: 161 QTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNS 220
Q L GM G + A VF M +++VV WT+MI GY +V AR FD ER+
Sbjct: 31 QMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDI 90
Query: 221 FTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVP 280
W TM++GY G+M A+ L+D M +D ++W ++ GY +G++ R+FD +P
Sbjct: 91 VLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP-E 149
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMFKE-VRQAKIKITEVAMVGAISACAQLRDIRMSNA 339
++ +W ++ YAQNG E + FK V + + + M +SACA+L
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 340 LTDHIEE-GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHG 398
+ + E G + V NALI+M+ KCG I++A F ++ RD+ +++ MI A HG
Sbjct: 210 VHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG 269
Query: 399 KSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHY 458
+A++LF M G+ P++VTF+GVL AC GLVE+G +F M F I P EH
Sbjct: 270 HGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHC 329
Query: 459 ACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDP 518
C+VDLL RAG L +A I + ADA W +LL A +V+ V++GE A L++++P
Sbjct: 330 GCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEP 389
Query: 519 EDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
+ +V+L+N+Y ++ A +K M G KK +G SWI+ +
Sbjct: 390 RNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETD 435
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 21/232 (9%)
Query: 75 HKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSG-VLPSGFTFSSVLNAC 133
++FD MP + F W LI+ + + + ++ RM G V+P+ T + VL+AC
Sbjct: 141 ERVFDDMPE-RNVFSWNGLIKGY-AQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKI---VQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
++ A GK VH G NK+ V+ AL+ MY K G + A +VF G+ RD++
Sbjct: 199 AKLGAFDFGKWVHK--YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Query: 191 AWTAMICGYAKVAMMVEARWLFDNMGERN-SFTWTTMVAGYASCGDMKAAKE-------- 241
+W MI G A EA LF M S T V +C M ++
Sbjct: 257 SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
Query: 242 --LYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
+ +M + + V + + G +T+A + +PV DA WA +L
Sbjct: 317 FTDFSIMPEIEHCGCVVDL--LSRAGFLTQAVEFINKMPVKADAVIWATLLG 366
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 266/472 (56%), Gaps = 21/472 (4%)
Query: 108 ISTYARMHQSGVLPSGFT--FSS------VLNACGRVPAMVEGKQVHGRLVQSGFGGNKI 159
IS A Q V P ++ FS+ +L C R A++E K HG++++ G+
Sbjct: 38 ISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVT 97
Query: 160 VQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM-GER 218
+ L+ Y+K G V AR VFDGM +R +V+W MI Y + M EA +F M E
Sbjct: 98 LLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG 157
Query: 219 NSFTWTTMVAGYASCG---DMKAAKELY----DVMSDKDGVTWVAMIAGYGKLGNVTEAR 271
F+ T+ + ++CG D K+L+ D + A++ Y K G + +A
Sbjct: 158 FKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAV 217
Query: 272 RLFDGIPVPQDAS--TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACA 329
++F+ + QD S TW++M+A Y QN +E + +++ ++ ++ + + I AC+
Sbjct: 218 QVFESM---QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 330 QLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSA 389
L + + I + + V+++ ++M++KCG++ ++ FS ++ +++ ++
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 390 MITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVF 449
+I+ FA+H + ++ + LF +M ++G+ PN+VTF +L+ C +GLVEEG RFF++M +
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 450 DIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETA 509
+ P HY+C+VD+LGRAG L AY LIK A+ WGSLLA+CRV+ N+EL E A
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 454
Query: 510 ARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
A L E++PE++G +VLL+N+YA+ +W +KL+ +KK G SWI
Sbjct: 455 AEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWI 506
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 121/227 (53%), Gaps = 11/227 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++F++M + + W+S++ ++ ++ ++ + Y R + + + FT SSV+ AC
Sbjct: 216 AVQVFESMQD-KSSVTWSSMVAGYVQNK-NYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ A++EGKQ+H + +SGFG N V ++ + MYAK G + ++ +F + ++++ W
Sbjct: 274 SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWN 333
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
+I G+AK A E LF+ M + N T++++++ G ++ + + +M
Sbjct: 334 TIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTT 393
Query: 250 DG-----VTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
G V + M+ G+ G ++EA L IP AS W ++LA
Sbjct: 394 YGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 270/514 (52%), Gaps = 30/514 (5%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
D W +++ + L + M GV P FT SSVL AC + + GK++
Sbjct: 266 DLVTWNTVLSS-LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 146 HGRLVQSG-FGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
H +++G N V +AL+ MY V R VFDGM DR + W AMI GY++
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 205 MVEARWLFDNMGER-----NSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTWV 255
EA LF M E NS T +V G + ++ + D+D
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN 444
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
++ Y +LG + A R+F G +D TW M+ Y + + ++ + + +++ + K
Sbjct: 445 TLMDMYSRLGKIDIAMRIF-GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 316 ITE-----------VAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+++ + ++ + +CA L + + + + + V +AL++M++
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
KCG + ++ + F + +++ T++ +I A+ HG Q+AIDL M +G+KPN+VTFI
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 425 VLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
V ACS SG+V+EG R F +M + +EP +HYAC+VDLLGRAG+++ AY L+ N
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM--NMMP 681
Query: 485 AD---ATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAE 541
D A W SLL A R+H N+E+GE AA++L++++P + YVLLAN+Y+S W A
Sbjct: 682 RDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKAT 741
Query: 542 VVKKLMSKKGIKKPSGYSWIQR--EISRQQTADS 573
V++ M ++G++K G SWI+ E+ + DS
Sbjct: 742 EVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS 775
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 213/460 (46%), Gaps = 32/460 (6%)
Query: 56 PLLLRVLNFSSEK---SNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYA 112
P LLR S+ + S + A +F + P+ W L+R+ + R + TY
Sbjct: 30 PYLLRATPTSATEDVASAVSGAPSIFISQSRSPEW--WIDLLRSKVRSNL-LREAVLTYV 86
Query: 113 RMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKI-VQTALLGMYAKS 171
M G+ P + F ++L A + M GKQ+H + + G+G + + V L+ +Y K
Sbjct: 87 DMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC 146
Query: 172 GCVCDARDVFDGMDDRDVVAWTAMI---CGYAKVAMMVEA-RWLFDNMGERNSFTWTTMV 227
G VFD + +R+ V+W ++I C + K M +EA R + D E +SFT ++V
Sbjct: 147 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 206
Query: 228 AGYASCGDMKAAKEL--------YDVMSDK-DGVTWVAMIAGYGKLGNVTEARRLFDGIP 278
+C ++ + L Y + + + ++A YGKLG + ++ L G
Sbjct: 207 ---TACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLL-GSF 262
Query: 279 VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSN 338
+D TW +L+ QN E +E +E+ ++ E + + AC+ L +R
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 339 ALTDH-IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEH 397
L + ++ G D V +AL++M+ C + R F M R + ++AMI ++++
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 398 GKSQDAIDLFFRMPKE-GLKPNQVTFIGVLNACSSSGLV--EEGCRFFQIMTGVFDIEPL 454
++A+ LF M + GL N T GV+ AC SG +E F + G+ D +
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL-DRDRF 441
Query: 455 PEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLL 494
++ ++D+ R G+++ A + + D TW +++
Sbjct: 442 VQN--TLMDMYSRLGKIDIAMRIFGK-MEDRDLVTWNTMI 478
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 114/239 (47%), Gaps = 5/239 (2%)
Query: 286 WAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIE 345
W +L ++ +E + + ++ IK A + A A L+D+ + + H+
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 346 E-GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAI 404
+ G ++ V+N L+N++ KCG+ ++ F + R+ +++++I++ K + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 405 DLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMT-GVFDIEPLPEHYACIVD 463
+ F M E ++P+ T + V+ ACS+ + E Q+ G+ E +V
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 464 LLGRAGQLERAYSLIKENATSADATTWGSLLAA-CRVHGNVELGETAARHLLE-IDPED 520
+ G+ G+L + L+ D TW ++L++ C+ +E E +LE ++P++
Sbjct: 245 MYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 283/571 (49%), Gaps = 78/571 (13%)
Query: 70 NICYAHKLFDTMPNC-PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSS 128
+I A +F+ P C D ++ ++I F SH I+ + +M G P FTF+S
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGF-SHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 129 VLNACGRVPA-MVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK----SGCVCDARDVFD- 182
VL V + Q H ++SG G V AL+ +Y+K + AR VFD
Sbjct: 154 VLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDE 213
Query: 183 ------------------------------GMDDR-DVVAWTAMICGYAKVAMMVEA--- 208
GMDD +VA+ AMI GY EA
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273
Query: 209 -RWLFDNMGERNSFTW----------------------------------TTMVAGYASC 233
R + + E + FT+ ++V+ Y C
Sbjct: 274 VRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKC 333
Query: 234 GDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACY 293
G A+ +++ M KD V+W A+++GY G++ EA+ +F + ++ +W M++
Sbjct: 334 GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK-EKNILSWMIMISGL 392
Query: 294 AQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTL 353
A+NG+ +EG+++F +++ + + A GAI +CA L + + D +L
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSL 452
Query: 354 IVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE 413
NALI M++KCG ++ A + F TM C D +++A+I A +HG +A+D++ M K+
Sbjct: 453 SAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK 512
Query: 414 GLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLER 473
G++P+++T + VL ACS +GLV++G ++F M V+ I P +HYA ++DLL R+G+
Sbjct: 513 GIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSD 572
Query: 474 AYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYAS 533
A S+I+ A W +LL+ CRVHGN+ELG AA L + PE GTY+LL+NM+A+
Sbjct: 573 AESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAA 632
Query: 534 QDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
+W V+KLM +G+KK SWI+ E
Sbjct: 633 TGQWEEVARVRKLMRDRGVKKEVACSWIEME 663
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/478 (20%), Positives = 190/478 (39%), Gaps = 115/478 (24%)
Query: 135 RVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTA 194
R ++ + VHG ++ GF + L+ +Y KS + AR +FD + + D +A T
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 195 MICGYAKVAMMVEARWLFDN--MGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK--- 249
M+ GY + AR +F+ + R++ + M+ G++ D +A L+ M +
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 250 -DGVTWVAMIAG------------------------------------YGKLGN----VT 268
D T+ +++AG Y K + +
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 269 EARRLFDGIPVPQDASTWAAMLACYAQNGY------------------------------ 298
AR++FD I + +D +W M+ Y +NGY
Sbjct: 206 SARKVFDEI-LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 299 --AKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
+E +EM + + + I++ E I ACA +++ + ++ D +
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFD 323
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSA--------------------------- 389
N+L++++ KCG D A F M +D+ +++A
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 390 ----MITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF-QI 444
MI+ AE+G ++ + LF M +EG +P F G + +C+ G G ++ Q+
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 445 MTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGN 502
+ FD L A ++ + + G +E A + + D+ +W +L+AA HG+
Sbjct: 444 LKIGFD-SSLSAGNA-LITMYAKCGVVEEARQVFR-TMPCLDSVSWNALIAALGQHGH 498
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 354 IVSNALINMHSKCGNIDLAWREFSTMRC--RDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
I +++ + G+I LA F RD Y+AMIT F+ + AI+LF +M
Sbjct: 81 IARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK 140
Query: 412 KEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQ---IMTGVFDIEPLPEHYACIVDLLGRA 468
EG KP+ TF VL + E+ C F + +G I + + +
Sbjct: 141 HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGE 507
L + + + D +W +++ +G +LGE
Sbjct: 201 PSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGE 239
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 267/515 (51%), Gaps = 29/515 (5%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+++ S + A LFD MP D W ++I + C S A+ ++ L
Sbjct: 191 LIHLYSRYKAVGNARILFDEMP-VRDMGSWNAMISGY---------CQSGNAK--EALTL 238
Query: 121 PSGF------TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCV 174
+G T S+L+AC G +H ++ G V L+ +YA+ G +
Sbjct: 239 SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 175 CDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGY 230
D + VFD M RD+++W ++I Y + A LF M + + T ++ +
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 231 ASCGDMKAAKELYDVMSDK-----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDAST 285
+ GD++A + + K D A++ Y KLG V AR +F+ +P D +
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVIS 417
Query: 286 WAAMLACYAQNGYAKEGIEMFKEVRQ-AKIKITEVAMVGAISACAQLRDIRMSNALTDHI 344
W +++ YAQNG+A E IEM+ + + +I + V + AC+Q +R L +
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 345 EEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAI 404
+ + V +L +M+ KCG ++ A F + + ++ +I HG + A+
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 537
Query: 405 DLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDL 464
LF M EG+KP+ +TF+ +L+ACS SGLV+EG F++M + I P +HY C+VD+
Sbjct: 538 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 597
Query: 465 LGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTY 524
GRAGQLE A IK + DA+ WG+LL+ACRVHGNV+LG+ A+ HL E++PE G +
Sbjct: 598 YGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 657
Query: 525 VLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYS 559
VLL+NMYAS KW G + ++ + KG++K G+S
Sbjct: 658 VLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 240/484 (49%), Gaps = 32/484 (6%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAF--LSHRAHFRHCISTYARMHQS 117
+++N N+ A FD + N D + W +I + + + C S + M S
Sbjct: 91 KLVNLYCYLGNVALARHTFDHIQN-RDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSS 147
Query: 118 GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDA 177
G+ P TF SVL AC V ++G ++H ++ GF + V +L+ +Y++ V +A
Sbjct: 148 GLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 178 RDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMK 237
R +FD M RD+ +W AMI GY + EA L + + +S T ++++ GD
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFN 264
Query: 238 AAKEL--YDVMSDKDGVTWVA--MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACY 293
+ Y + + +V+ +I Y + G + + +++FD + V +D +W +++ Y
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV-RDLISWNSIIKAY 323
Query: 294 AQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH-IEEGCCDRT 352
N I +F+E+R ++I+ + ++ S +QL DIR ++ + +G
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 353 LIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPK 412
+ + NA++ M++K G +D A F+ + D+ +++ +I+ +A++G + +AI+++ M +
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 413 EG-LKPNQVTFIGVLNACSSSGLVEEGCRFF------QIMTGVFDIEPLPEHYACIVDLL 465
EG + NQ T++ VL ACS +G + +G + + VF + L D+
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSL-------ADMY 496
Query: 466 GRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE--IDPEDSGT 523
G+ G+LE A SL + ++ W +L+A HG+ E + +L+ + P D T
Sbjct: 497 GKCGRLEDALSLFYQ-IPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP-DHIT 554
Query: 524 YVLL 527
+V L
Sbjct: 555 FVTL 558
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 14/311 (4%)
Query: 143 KQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKV 202
K +H RLV S N + L+ +Y G V AR FD + +RDV AW MI GY +
Sbjct: 71 KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRA 130
Query: 203 AMMVEARWLFDNMGERNSFT--WTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAG 260
E F + T + T + +C + +++ ++ K G W +A
Sbjct: 131 GNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIH-CLALKFGFMWDVYVAA 189
Query: 261 -----YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
Y + V AR LFD +PV +D +W AM++ Y Q+G AKE + + +R
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPV-RDMGSWNAMISGYCQSGNAKEALTLSNGLR----A 244
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWRE 375
+ V +V +SAC + D + + + + L VSN LI+++++ G + +
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 376 FSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLV 435
F M RD+ +++++I A+ + + AI LF M ++P+ +T I + + S G +
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364
Query: 436 EEGCRFFQIMT 446
CR Q T
Sbjct: 365 -RACRSVQGFT 374
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 267/498 (53%), Gaps = 17/498 (3%)
Query: 76 KLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGR 135
++F MP +A WT++I L H ++ ++ ++ M +S L +TF+ L AC
Sbjct: 164 RVFSEMP-FRNAVTWTAIITG-LVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAG 221
Query: 136 VPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAM 195
+ + GK +H ++ GF V +L MY + G + D +F+ M +RDVV+WT++
Sbjct: 222 LRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSL 281
Query: 196 ICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELY-DVMS--- 247
I Y ++ V+A F M N T+ +M + AS + ++L+ +V+S
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL 341
Query: 248 -DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMF 306
D V+ +M+ Y GN+ A LF G+ +D +W+ ++ Y Q G+ +EG + F
Sbjct: 342 NDSLSVS-NSMMKMYSTCGNLVSASVLFQGMRC-RDIISWSTIIGGYCQAGFGEEGFKYF 399
Query: 307 KEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC--CDRTLIVSNALINMHS 364
+RQ+ K T+ A+ +S + I + H C ++ V ++LINM+S
Sbjct: 400 SWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV--HALALCFGLEQNSTVRSSLINMYS 457
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
KCG+I A F D+ + +AMI +AEHGKS++AIDLF + K G +P+ VTFI
Sbjct: 458 KCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFIS 517
Query: 425 VLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
VL AC+ SG ++ G +F +M +++ P EHY C+VDLL RAG+L A +I E +
Sbjct: 518 VLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWK 577
Query: 485 ADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVK 544
D W +LL AC+ G++E G AA +LE+DP + V LAN+Y+S A V+
Sbjct: 578 KDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVR 637
Query: 545 KLMSKKGIKKPSGYSWIQ 562
K M KG+ K G+S I+
Sbjct: 638 KNMKAKGVIKEPGWSSIK 655
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 193/420 (45%), Gaps = 12/420 (2%)
Query: 70 NICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYA-RMHQSGVLPSGFTFSS 128
N+ A ++FD MP+ D WTS+I+ +++ I A R+ V P S
Sbjct: 55 NLRAARQVFDKMPH-GDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 129 VLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD 188
VL ACG+ + G+ +H V++ + V ++LL MY + G + + VF M R+
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 189 VVAWTAMICGYAKVAMMVEARWLFDNM--GERNSFTWTTMVAGYASCG--DMKAAKELYD 244
V WTA+I G E F M E S T+T +A A G +K K ++
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 245 VMSDKDGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAK 300
+ + VT + ++ Y + G + + LF+ + +D +W +++ Y + G
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIGQEV 292
Query: 301 EGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALI 360
+ +E F ++R +++ E SACA L + L ++ + +L VSN+++
Sbjct: 293 KAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMM 352
Query: 361 NMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQV 420
M+S CGN+ A F MRCRD+ ++S +I + + G ++ F M + G KP
Sbjct: 353 KMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDF 412
Query: 421 TFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE 480
+L+ + ++E G R + F +E + ++++ + G ++ A + E
Sbjct: 413 ALASLLSVSGNMAVIEGG-RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 285/520 (54%), Gaps = 31/520 (5%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
++N + +A +FD M D W S+I A ++ + + ++ + G+
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSE-RDLISWNSVI-AGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 121 PSGFTFSSVLNACGRVP-AMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
P +T +SVL A +P + KQVH ++ + V TAL+ Y+++ C+ +A
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVAGYASCGD 235
+F+ + D+VAW AM+ GY + + LF M GER + FT T+ + +CG
Sbjct: 474 LFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV---FKTCGF 529
Query: 236 MKAAKE-----LYDVMSDKDGVTWVA--MIAGYGKLGNVTEARRLFDGIPVPQDASTWAA 288
+ A + Y + S D WV+ ++ Y K G+++ A+ FD IPVP D + W
Sbjct: 530 LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTT 588
Query: 289 MLACYAQNGYAKEGIEMFKEVRQAKIKITE--VAMVGAISAC----AQLRDIRMSNALTD 342
M++ +NG + +F ++R + E +A + S+C Q R I +NAL
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH-ANALKL 647
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQD 402
+ C V +L++M++KCG+ID A+ F + ++ ++AM+ A+HG+ ++
Sbjct: 648 N-----CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
+ LF +M G+KP++VTFIGVL+ACS SGLV E + + M G + I+P EHY+C+
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 463 DLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSG 522
D LGRAG +++A +LI+ + A A+ + +LLAACRV G+ E G+ A LLE++P DS
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 523 TYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
YVLL+NMYA+ KW ++ + +M +KK G+SWI+
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIE 862
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 187/413 (45%), Gaps = 17/413 (4%)
Query: 100 HRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKI 159
H + + +A M +S V TF +L +V ++ G+QVH ++ G
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 160 VQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM---- 215
V +L+ MY K AR VFD M +RD+++W ++I G A+ + VEA LF +
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 216 GERNSFTWTTMVAGYASCGD-MKAAKELY----DVMSDKDGVTWVAMIAGYGKLGNVTEA 270
+ + +T T+++ +S + + +K+++ + + D A+I Y + + EA
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 271 RRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQ 330
LF+ D W AM+A Y Q+ + +++F + + + + + C
Sbjct: 472 EILFERHNF--DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 529
Query: 331 LRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAM 390
L I + + + D L VS+ +++M+ KCG++ A F ++ D ++ M
Sbjct: 530 LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTM 589
Query: 391 ITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFD 450
I+ E+G+ + A +F +M G+ P++ T + A S +E+G QI
Sbjct: 590 ISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG---RQIHANALK 646
Query: 451 IEPLPEHYA--CIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
+ + + +VD+ + G ++ AY L K + T W ++L HG
Sbjct: 647 LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKR-IEMMNITAWNAMLVGLAQHG 698
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 191/449 (42%), Gaps = 44/449 (9%)
Query: 57 LLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRA----HFRHCISTYA 112
L+ +++ S+ ++ YA ++FD MP+ D W S++ A+ + + +
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPD-RDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 113 RMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
+ Q V S T S +L C + + HG + G G++ V AL+ +Y K G
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 173 CVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYAS 232
V + + +F+ M RDVV W M+ Y ++ EA + + + S
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA---------------IDLSSAFHS 239
Query: 233 CG---DMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
G + + L + D V A +V+E G+ + ++A+
Sbjct: 240 SGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSAL 299
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
L C+A ++ ++ ++ +V + ++ ++ + + + +
Sbjct: 300 LKCFA-------------DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFR 409
D L VSN+LINM+ K A F M RD+ +++++I A++G +A+ LF +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 410 MPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF-QIMTGVFDIEPLPEHYA--CIVDLLG 466
+ + GLKP+Q T VL A SS + EG Q+ I + + + ++D
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 467 RAGQLERAYSLIKENATSADATTWGSLLA 495
R ++ A L + + + D W +++A
Sbjct: 464 RNRCMKEAEILFERH--NFDLVAWNAMMA 490
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 142 GKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAK 201
GK H R++ + + L+ MY+K G + AR VFD M DRD+V+W +++ YA+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 202 -----VAMMVEARWLFDNMGE----RNSFTWTTMVAGYASCGDMKAAKELY----DVMSD 248
V + +A LF + + + T + M+ G + A++ + + D
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 249 KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE 308
D A++ Y K G V E + LF+ +P +D W ML Y + G+ +E I++
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 309 VRQAKIKITEVAM 321
+ + E+ +
Sbjct: 237 FHSSGLNPNEITL 249
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 267/534 (50%), Gaps = 51/534 (9%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQ----------SGVLPSG 123
A KLFD MP+ D+F W ++I + +R + + +M + +G +G
Sbjct: 124 ARKLFDEMPS-RDSFSWNTMISGYAKNR-RIGEALLLFEKMPERNAVSWSAMITGFCQNG 181
Query: 124 FTFSSVL-----------NACGRVPAMVEGKQV---------HGRLVQSGFGGNKIVQTA 163
S+V+ C V +++ +++ +G LV SG
Sbjct: 182 EVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLV-SGREDLVYAYNT 240
Query: 164 LLGMYAKSGCVCDARDVFDGMDD---------------RDVVAWTAMICGYAKVAMMVEA 208
L+ Y + G V AR +FD + D ++VV+W +MI Y KV +V A
Sbjct: 241 LIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSA 300
Query: 209 RWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVT 268
R LFD M +R++ +W TM+ GY M+ A L+ M ++D +W M++GY +GNV
Sbjct: 301 RLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVE 360
Query: 269 EARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISAC 328
AR F+ P S W +++A Y +N KE +++F + K + +SA
Sbjct: 361 LARHYFEKTPEKHTVS-WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAS 419
Query: 329 AQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRC-RDMYTY 387
L ++R+ + + + + V NALI M+S+CG I + R F M+ R++ T+
Sbjct: 420 TGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITW 478
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTG 447
+AMI +A HG + +A++LF M G+ P+ +TF+ VLNAC+ +GLV+E F M
Sbjct: 479 NAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMS 538
Query: 448 VFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGE 507
V+ IEP EHY+ +V++ GQ E A +I D T WG+LL ACR++ NV L
Sbjct: 539 VYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAH 598
Query: 508 TAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
AA + ++PE S YVLL NMYA W A V+ M K IKK G SW+
Sbjct: 599 VAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 188/422 (44%), Gaps = 68/422 (16%)
Query: 165 LGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWT 224
L +SG + +ARD+F+ ++ R+ V W MI GY K M +AR LFD M +R+ TW
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 225 TMVAGYASCGDMK---AAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQ 281
TM++GY SCG ++ A++L+D M +D +W MI+GY K + EA LF+ +P +
Sbjct: 107 TMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP-ER 165
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKE--VRQAKI------------KITEVAMV----- 322
+A +W+AM+ + QNG + +F++ V+ + +++E A V
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYG 225
Query: 323 --------------GAISACAQLRDIRMSNALTDHIEEGCCD-----------RTLIVSN 357
I Q + + L D I + C D + ++ N
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 358 ALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKP 417
++I + K G++ A F M+ RD +++ MI + + +DA LF MP
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR---- 341
Query: 418 NQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYS- 476
+ ++ +++ +S G VE +F E PE + + + A + + Y
Sbjct: 342 DAHSWNMMVSGYASVGNVELARHYF---------EKTPEKHTVSWNSIIAAYEKNKDYKE 392
Query: 477 ----LIKEN--ATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANM 530
I+ N D T SLL+A N+ LG + +++ D + L M
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITM 452
Query: 531 YA 532
Y+
Sbjct: 453 YS 454
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 260/510 (50%), Gaps = 32/510 (6%)
Query: 55 SPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM 114
S L ++++ + ++ A K+FD +P + I +IR+++++ + + + M
Sbjct: 74 SSLGVKLMRAYASLKDVASARKVFDEIPE-RNVIIINVMIRSYVNN-GFYGEGVKVFGTM 131
Query: 115 HQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCV 174
V P +TF VL AC +V G+++HG + G V L+ MY K G +
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 175 CDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCG 234
+AR V D M RDVV+W +++ GYA+ FD+
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQ-------NQRFDDA------------------- 225
Query: 235 DMKAAKELYDVMSDKDGVTWVAMIAGYGKLG--NVTEARRLFDGIPVPQDASTWAAMLAC 292
++ +E+ V D T +++ NV + +F + + +W M+
Sbjct: 226 -LEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG-KKSLVSWNVMIGV 283
Query: 293 YAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRT 352
Y +N E +E++ + + V++ + AC + + + +IE
Sbjct: 284 YMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPN 343
Query: 353 LIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPK 412
L++ NALI+M++KCG ++ A F M+ RD+ +++AMI+A+ G+ DA+ LF ++
Sbjct: 344 LLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQD 403
Query: 413 EGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLE 472
GL P+ + F+ L ACS +GL+EEG F++MT + I P EH AC+VDLLGRAG+++
Sbjct: 404 SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 463
Query: 473 RAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYA 532
AY I++ + + WG+LL ACRVH + ++G AA L ++ PE SG YVLL+N+YA
Sbjct: 464 EAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYA 523
Query: 533 SQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+W ++ +M KG+KK G S ++
Sbjct: 524 KAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 14/249 (5%)
Query: 54 LSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYAR 113
++ LL V N ++E N+ Y +F M W +I ++ + A + Y+R
Sbjct: 244 MASLLPAVSNTTTE--NVMYVKDMFFKMGK-KSLVSWNVMIGVYMKN-AMPVEAVELYSR 299
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
M G P + +SVL ACG A+ GK++HG + + N +++ AL+ MYAK GC
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359
Query: 174 VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAG 229
+ ARDVF+ M RDVV+WTAMI Y +A LF + + +S + T +A
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 230 YASCGDMKAAKELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDAS 284
+ G ++ + + +M+D +T M+ G+ G V EA R + + +
Sbjct: 420 CSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNER 479
Query: 285 TWAAML-AC 292
W A+L AC
Sbjct: 480 VWGALLGAC 488
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 211/347 (60%), Gaps = 3/347 (0%)
Query: 217 ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDG 276
E +SF TT++ YA G + A+ ++D MS +D W AMI GY + G++ A LFD
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 277 IPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAK-IKITEVAMVGAISACAQLRDIR 335
+P ++ ++W +++ ++QNG E ++MF + + K +K + +V + ACA L ++
Sbjct: 174 MP-RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE 232
Query: 336 MSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM-RCRDMYTYSAMITAF 394
+ L + E + V NA I M+SKCG ID+A R F + R++ ++++MI +
Sbjct: 233 IGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSL 292
Query: 395 AEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPL 454
A HGK +A+ LF +M +EG KP+ VTF+G+L AC G+V +G F+ M V I P
Sbjct: 293 ATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPK 352
Query: 455 PEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLL 514
EHY C++DLLGR G+L+ AY LIK DA WG+LL AC HGNVE+ E A+ L
Sbjct: 353 LEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALF 412
Query: 515 EIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
+++P + G V+++N+YA+ +KW G ++KLM K+ + K +GYS+
Sbjct: 413 KLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYF 459
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 173/409 (42%), Gaps = 79/409 (19%)
Query: 70 NICYAHKLFDTMPN-CPDAFIWTSLIRAF-LSHRAHFRHCISTYARMHQSGVLPSGFTFS 127
N+ YA KLFD N C F++ LI+A+ + H+ H I Y + G+ PS TF+
Sbjct: 31 NLVYARKLFDHHQNSC--TFLYNKLIQAYYVHHQPH--ESIVLYNLLSFDGLRPSHHTFN 86
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
+ A + + +H + +SGF + T L+ YAK G +C AR VFD M R
Sbjct: 87 FIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKR 146
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS 247
DV W AMI GY + M A LFD+M +N +WTT+++G++ G+ A +++ M
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 248 -DK----DGVTWV-----------------------------------AMIAGYGKLGNV 267
DK + +T V A I Y K G +
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMI 266
Query: 268 TEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISA 327
A+RLF+ + ++ +W +M+ A +G E + +F ++ + K V VG + A
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 328 CAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTY 387
C + L +EE +H ++ Y
Sbjct: 327 CVHGGMVVKGQELFKSMEE---------------VHKISPKLE---------------HY 356
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
MI GK Q+A DL MP +KP+ V + +L ACS G VE
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMP---MKPDAVVWGTLLGACSFHGNVE 402
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 278/523 (53%), Gaps = 16/523 (3%)
Query: 53 FLSPLLLR--VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCIST 110
F S L L+ +++ ++ ++ +A KLFD + D WT++I F S + +
Sbjct: 43 FCSNLQLKDMLIDLYLKQGDVKHARKLFDRISK-RDVVSWTAMISRF-SRCGYHPDALLL 100
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK 170
+ MH+ V + FT+ SVL +C + + EG Q+HG + + GN IV++ALL +YA+
Sbjct: 101 FKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYAR 160
Query: 171 SGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM---GER-NSFTWTTM 226
G + +AR FD M +RD+V+W AMI GY A + LF M G++ + FT+ ++
Sbjct: 161 CGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSL 220
Query: 227 VAGYASCGDMKAAKELYDVMSD----KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQD 282
+ ++ EL+ + + +++ Y K G++ A +L +G
Sbjct: 221 LRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDL 280
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
S A + QN + ++FK++ + K K+ EV + + C + + + +
Sbjct: 281 LSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHG 340
Query: 343 HIEEGCCDR-TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQ 401
+ R + + N+LI+M++K G I+ A F M+ +D+ +++++I + HG +
Sbjct: 341 FALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFE 400
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI 461
AIDL+ RM E +KPN VTF+ +L+ACS +G E G + + M IE EH +CI
Sbjct: 401 KAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCI 460
Query: 462 VDLLGRAGQLERAYSLI--KENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPE 519
+D+L R+G LE AY+LI KE S ++TWG+ L ACR HGNV+L + AA LL ++P
Sbjct: 461 IDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPR 520
Query: 520 DSGTYVLLANMYASQDKWVGAEVVKKLMSKKG-IKKPSGYSWI 561
Y+ LA++YA+ W A +KLM + G K GYS +
Sbjct: 521 KPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 188/423 (44%), Gaps = 19/423 (4%)
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
+HG + +GF N ++ L+ +Y K G V AR +FD + RDVV+WTAMI +++
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 205 MVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDG-------VT 253
+A LF M N FT+ +++ SC D+ KE + + +
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVL---KSCKDLGCLKEGMQIHGSVEKGNCAGNLIV 150
Query: 254 WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAK 313
A+++ Y + G + EAR FD + +D +W AM+ Y N A +F+ +
Sbjct: 151 RSALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDGYTANACADTSFSLFQLMLTEG 209
Query: 314 IKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAW 373
K + A ++ + + + L + R+ + +L+N + KCG++ AW
Sbjct: 210 KKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAW 269
Query: 374 REFSTMRCRDMYTYSAMITAFAEHGK-SQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS 432
+ + RD+ + +A+IT F++ + DA D+F M + K ++V +L C++
Sbjct: 270 KLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTI 329
Query: 433 GLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGS 492
V G + I ++D+ ++G++E A L E D +W S
Sbjct: 330 ASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAV-LAFEEMKEKDVRSWTS 388
Query: 493 LLAACRVHGNVELGETAARHL--LEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKK 550
L+A HGN E + I P D LL+ + +G ++ +++K
Sbjct: 389 LIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKH 448
Query: 551 GIK 553
GI+
Sbjct: 449 GIE 451
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 282/519 (54%), Gaps = 25/519 (4%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV 119
++L FSS +I YA +F+ + N + F++ ++IR + S S + ++ G+
Sbjct: 65 KLLAFSS-VLDIRYASSIFEHVSN-TNLFMFNTMIRGY-SISDEPERAFSVFNQLRAKGL 121
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
F+F + L +C R + G+ +HG ++SGF ++ AL+ Y G + DAR
Sbjct: 122 TLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARK 181
Query: 180 VFDGMDDR-DVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCG 234
VFD M D V ++ ++ GY +V+ A LF M + N T + ++ + G
Sbjct: 182 VFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLG 241
Query: 235 DMKAAKELY----DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML 290
D+ A+ + + D D A+I YGK G ++ ARR+FD + +D TW M+
Sbjct: 242 DLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFD-CAIRKDVVTWNCMI 300
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
YA+ G +E + + ++++ K+K VG +S+CA + + D +EE
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIA 360
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
I+ AL++M++K G ++ A F+ M+ +D+ +++AMI+ + HG +++A+ LF +M
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
Query: 411 PKEG--LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRA 468
+E ++PN++TF+ VLNACS GLV EG R F+ M + P EHY C+VDLLGRA
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLA 528
GQLE AY LI+ ++D+T W +LLAACRV+GN +LGE+ L E+ +LLA
Sbjct: 481 GQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLA 540
Query: 529 NMYA---SQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
+A + +K + E+ K +K +GYS I+ E
Sbjct: 541 GTHAVAGNPEKSLDNELNKG-------RKEAGYSAIEIE 572
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 159/498 (31%), Positives = 273/498 (54%), Gaps = 16/498 (3%)
Query: 76 KLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGR 135
++FD MP D W ++I F + + RM SG P+ + + ++AC R
Sbjct: 163 QVFDEMPE-RDVASWNTVISCFY-QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSR 220
Query: 136 VPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAM 195
+ + GK++H + V+ GF ++ V +AL+ MY K C+ AR+VF M + +VAW +M
Sbjct: 221 LLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSM 280
Query: 196 ICGY-----AKVAMMVEARWLFDNMGERNS-FTWTTMVAGYASCGDMKAAKEL--YDVMS 247
I GY +K + + R + + G R S T T+++ + ++ K + Y + S
Sbjct: 281 IKGYVAKGDSKSCVEILNRMIIE--GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS 338
Query: 248 DKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
+ +V ++I Y K G A +F A +W M++ Y G + +E+
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ-KDVAESWNVMISSYISVGNWFKAVEV 397
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
+ ++ +K V + AC+QL + + I E + ++ +AL++M+SK
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
CGN A+R F+++ +D+ +++ MI+A+ HG+ ++A+ F M K GLKP+ VT + V
Sbjct: 458 CGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAV 517
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA-TS 484
L+AC +GL++EG +FF M + IEP+ EHY+C++D+LGRAG+L AY +I++ TS
Sbjct: 518 LSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETS 577
Query: 485 ADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVK 544
+A +L +AC +H LG+ AR L+E P+D+ TY++L N+YAS + W A V+
Sbjct: 578 DNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVR 637
Query: 545 KLMSKKGIKKPSGYSWIQ 562
M + G++K G SWI+
Sbjct: 638 LKMKEMGLRKKPGCSWIE 655
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 210/441 (47%), Gaps = 15/441 (3%)
Query: 72 CYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV-LPSGFTFSSVL 130
C A +F+ D +IW SL+ + S + F + + R+ + +P FTF +V+
Sbjct: 56 CSARHVFENFDIRSDVYIWNSLMSGY-SKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVI 114
Query: 131 NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
A G + G+ +H +V+SG+ + +V ++L+GMYAK ++ VFD M +RDV
Sbjct: 115 KAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVA 174
Query: 191 AWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVM 246
+W +I + + +A LF M E NS + T ++ + ++ KE++
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 247 SDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
K D A++ YGK + AR +F +P + W +M+ Y G +K
Sbjct: 235 VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSC 293
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+E+ + + ++ + + AC++ R++ + ++ + + V+ +LI++
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDL 353
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+ KCG +LA FS + +++ MI+++ G A++++ +M G+KP+ VTF
Sbjct: 354 YFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 423 IGVLNACSSSGLVEEGCRF-FQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKEN 481
VL ACS +E+G + I + + L + ++D+ + G + A+ + +
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSISESRLETDELL--LSALLDMYSKCGNEKEAFRIFN-S 470
Query: 482 ATSADATTWGSLLAACRVHGN 502
D +W +++A HG
Sbjct: 471 IPKKDVVSWTVMISAYGSHGQ 491
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 159/316 (50%), Gaps = 12/316 (3%)
Query: 128 SVLNAC-GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDD 186
S+L C ++ K VH R++ G + ++ +L+ +Y C AR VF+ D
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 187 R-DVVAWTAMICGYAKVAMM-----VEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAK 240
R DV W +++ GY+K +M V R L ++ +SFT+ ++ Y + G +
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 241 ELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQN 296
++ ++ D V +++ Y K + ++FD +P +D ++W +++C+ Q+
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVISCFYQS 186
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
G A++ +E+F + + + V++ AISAC++L + + + + V+
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
+AL++M+ KC +++A F M + + +++MI + G S+ +++ RM EG +
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 417 PNQVTFIGVLNACSSS 432
P+Q T +L ACS S
Sbjct: 307 PSQTTLTSILMACSRS 322
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 268 bits (684), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 271/520 (52%), Gaps = 32/520 (6%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLS-----------HRAHFRHCISTYARMHQSGV 119
I A KLFD +P D WT +I ++ R R + T+ M +
Sbjct: 62 IAEARKLFDGLPE-RDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYL 120
Query: 120 LPSGFTFSSVLNACGRVP--------AMVEGKQVHGR------LVQSGFGGNKIVQTALL 165
+ + +L +P M++G GR L N + +++
Sbjct: 121 RSKQLSIAEML--FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMV 178
Query: 166 GMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTT 225
+ G + +A ++F+ M RDVV+WTAM+ G AK + EAR LFD M ERN +W
Sbjct: 179 KALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNA 238
Query: 226 MVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDAST 285
M+ GYA + A +L+ VM ++D +W MI G+ + + +A LFD +P ++ +
Sbjct: 239 MITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP-EKNVIS 297
Query: 286 WAAMLACYAQNGYAKEGIEMF-KEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI 344
W M+ Y +N +E + +F K +R +K V +SAC+ L + + I
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLI 357
Query: 345 EEGCCDRTLIVSNALINMHSKCGNIDLAWREFST-MRC-RDMYTYSAMITAFAEHGKSQD 402
+ + IV++AL+NM+SK G + A + F + C RD+ ++++MI +A HG ++
Sbjct: 358 SKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKE 417
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
AI+++ +M K G KP+ VT++ +L ACS +GLVE+G FF+ + + EHY C+V
Sbjct: 418 AIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLV 477
Query: 463 DLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSG 522
DL GRAG+L+ + I + + +G++L+AC VH V + + + +LE +D+G
Sbjct: 478 DLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAG 537
Query: 523 TYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
TYVL++N+YA+ K A ++ M +KG+KK G SW++
Sbjct: 538 TYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVK 577
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 189/374 (50%), Gaps = 46/374 (12%)
Query: 164 LLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER-NSFT 222
L+G K G + +AR +FDG+ +RDVV WT +I GY K+ M EAR LFD + R N T
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 223 WTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQD 282
WT MV+GY + A+ L+ M +++ V+W MI GY + G + +A LFD +P ++
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP-ERN 170
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
+W +M+ Q G E + +F+ + + + ++ AMV ++ ++ + R L D
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMPRRDV-VSWTAMVDGLAKNGKVDEAR---RLFD 226
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAF-------- 394
+ E R +I NA+I +++ ID A + F M RD +++ MIT F
Sbjct: 227 CMPE----RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNK 282
Query: 395 -----------------------AEHGKSQDAIDLFFRMPKEG-LKPNQVTFIGVLNACS 430
E+ ++++A+++F +M ++G +KPN T++ +L+ACS
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 431 SSGLVEEGCRFFQIMT-GVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT-SADAT 488
+ EG + Q+++ V + + ++++ ++G+L A + D
Sbjct: 343 DLAGLVEGQQIHQLISKSVHQKNEIVT--SALLNMYSKSGELIAARKMFDNGLVCQRDLI 400
Query: 489 TWGSLLAACRVHGN 502
+W S++A HG+
Sbjct: 401 SWNSMIAVYAHHGH 414
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 12/208 (5%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCP-DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV 119
+LN S+ + A K+FD C D W S+I A +H H + I Y +M + G
Sbjct: 372 LLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMI-AVYAHHGHGKEAIEMYNQMRKHGF 430
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQ-SGFGGNKIVQTALLGMYAKSGCVCDAR 178
PS T+ ++L AC + +G + LV+ + T L+ + ++G + D
Sbjct: 431 KPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVT 490
Query: 179 DVFDGMDDRDVVAWTAMICG----YAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCG 234
+ + D R ++ I + +V++ E G ++ T+ M YA+ G
Sbjct: 491 NFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANG 550
Query: 235 DMKAAKELYDVMSDK-----DGVTWVAM 257
+ A E+ M +K G +WV +
Sbjct: 551 KREEAAEMRMKMKEKGLKKQPGCSWVKV 578
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 263/525 (50%), Gaps = 44/525 (8%)
Query: 80 TMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAM 139
++ P ++ ++++ L+ F ++ + + G+ P FT VL + GR+ +
Sbjct: 4 SLLQTPSLLMYNKMLKS-LADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV 62
Query: 140 VEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGY 199
+EG++VHG V++G + V +L+GMYA G + VFD M RDVV+W +I Y
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 200 AKVAMMVEARWLFDNMGERNSFTW------------------------------------ 223
+A +F M + ++ +
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSV 182
Query: 224 ---TTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVP 280
+V + CG + A+ ++D M DK+ W +M+ GY G + EAR LF+ PV
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPV- 241
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL 340
+D W AM+ Y Q E +E+F+ ++ A I+ +V ++ CAQ + +
Sbjct: 242 KDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI 301
Query: 341 TDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKS 400
+I E +V AL++M++KCG I+ A F ++ RD +++++I A +G S
Sbjct: 302 HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMS 361
Query: 401 QDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYAC 460
A+DL++ M G++ + +TF+ VL AC+ G V EG + F MT +++P EH +C
Sbjct: 362 GRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSC 421
Query: 461 IVDLLGRAGQLERAYSLIKENATSADAT---TWGSLLAACRVHGNVELGETAARHLLEID 517
++DLL RAG L+ A LI + +D T + SLL+A R +GNV++ E A L +++
Sbjct: 422 LIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVE 481
Query: 518 PEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
DS + LLA++YAS ++W V++ M GI+K G S I+
Sbjct: 482 VSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIE 526
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 238/449 (53%), Gaps = 13/449 (2%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD 185
S +L A P + K++H ++++GF + T LL G +C AR VFD M
Sbjct: 13 LSELLRASSSKPKQL--KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMH 70
Query: 186 DRDVVAWTAMICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVAGYASCGDMKAAKE 241
+ W + GY + + E+ L+ M G R + FT+ +V + GD
Sbjct: 71 KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFA 130
Query: 242 LYDVMSDKD----GVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
L+ + G+ ++ Y K G ++ A LF+ + V +D W A LA Q G
Sbjct: 131 LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQV-KDLVAWNAFLAVCVQTG 189
Query: 298 YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSN 357
+ +E F ++ ++ +V +SAC QL + + + D + D +IV N
Sbjct: 190 NSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVEN 249
Query: 358 ALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKP 417
A ++MH KCGN + A F M+ R++ ++S MI +A +G S++A+ LF M EGL+P
Sbjct: 250 ARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRP 309
Query: 418 NQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFD--IEPLPEHYACIVDLLGRAGQLERAY 475
N VTF+GVL+ACS +GLV EG R+F +M D +EP EHYAC+VDLLGR+G LE AY
Sbjct: 310 NYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAY 369
Query: 476 SLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQD 535
IK+ D WG+LL AC VH ++ LG+ A L+E P+ +VLL+N+YA+
Sbjct: 370 EFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAG 429
Query: 536 KWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
KW + V+ M K G KK + YS ++ E
Sbjct: 430 KWDCVDKVRSKMRKLGTKKVAAYSSVEFE 458
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 55 SPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM 114
+ LL ++L ++CYA ++FD M P F+W +L + ++ ++ F + Y +M
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHK-PRIFLWNTLFKGYVRNQLPFESLL-LYKKM 100
Query: 115 HQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCV 174
GV P FT+ V+ A ++ G +H +V+ GFG IV T L+ MY K G +
Sbjct: 101 RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGEL 160
Query: 175 CDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGY 230
A +F+ M +D+VAW A + + A F+ M + +SFT +M++
Sbjct: 161 SSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSAC 220
Query: 231 ASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTW 286
G ++ +E+YD D + + A + + K GN AR LF+ + ++ +W
Sbjct: 221 GQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK-QRNVVSW 279
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQ 330
+ M+ YA NG ++E + +F ++ ++ V +G +SAC+
Sbjct: 280 STMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 14/231 (6%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A LF++M D W + + A + + + +M V FT S+L+AC
Sbjct: 163 AEFLFESM-QVKDLVAWNAFL-AVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSAC 220
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
G++ ++ G++++ R + N IV+ A L M+ K G AR +F+ M R+VV+W+
Sbjct: 221 GQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWS 280
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVM--- 246
MI GYA EA LF M N T+ +++ + G + K + +M
Sbjct: 281 TMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Query: 247 SDKD----GVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML-AC 292
+DK+ + M+ G+ G + EA +PV D W A+L AC
Sbjct: 341 NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGAC 391
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 247/470 (52%), Gaps = 35/470 (7%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P+ F++ +L + F++ +H + Y RM + V PS +T+SS++ A E Q
Sbjct: 834 PNVFVYNALFKGFVTC-SHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQ 892
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
H + + GFG + +QT L+ Y+ +G + +AR VFD M +RD +AWT M+ Y +V
Sbjct: 893 AH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLD 950
Query: 205 MVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKL 264
M A L + M E+N T ++ GY G+++ A+ L++ M KD ++W MI G
Sbjct: 951 MDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKG---- 1006
Query: 265 GNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGA 324
Y+QN +E I +F ++ + I EV M
Sbjct: 1007 ----------------------------YSQNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 325 ISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDM 384
ISACA L + + + + + + + +AL++M+SKCG+++ A F + +++
Sbjct: 1039 ISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNL 1098
Query: 385 YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQI 444
+ ++++I A HG +Q+A+ +F +M E +KPN VTF+ V AC+ +GLV+EG R ++
Sbjct: 1099 FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRS 1158
Query: 445 MTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVE 504
M + I EHY +V L +AG + A LI +A WG+LL CR+H N+
Sbjct: 1159 MIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLV 1218
Query: 505 LGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKK 554
+ E A L+ ++P +SG Y LL +MYA Q++W ++ M + GI+K
Sbjct: 1219 IAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 281/512 (54%), Gaps = 17/512 (3%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHF-RHCISTYARMHQSGV 119
+L S+ ++ + ++F+ + +A WT++I ++ +R F + +++ M +SG+
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIAK-KNAVSWTAMISSY--NRGEFSEKALRSFSEMIKSGI 299
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGN-KIVQTALLGMYAKSGCVCDAR 178
P+ T SVL++CG + + EGK VHG V+ N + + AL+ +YA+ G + D
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCE 359
Query: 179 DVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCG 234
V + DR++VAW ++I YA M+++A LF M + ++FT + ++ + G
Sbjct: 360 TVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG 419
Query: 235 DMKAAKELYD--VMSD-KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
+ K+++ + +D D ++I Y K G+V A +F+ I + TW +ML
Sbjct: 420 LVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK-HRSVVTWNSMLC 478
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH-IEEGCCD 350
++QNG + E I +F + + +++ EV + I AC+ + + + I G D
Sbjct: 479 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKD 538
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
L ALI+M++KCG+++ A F M R + ++S+MI A+ HG+ AI F +M
Sbjct: 539 --LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 596
Query: 411 PKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQ 470
+ G KPN+V F+ VL+AC SG VEEG +F +M F + P EH+AC +DLL R+G
Sbjct: 597 VESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGD 655
Query: 471 LERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANM 530
L+ AY IKE ADA+ WGSL+ CR+H +++ + L +I +D+G Y LL+N+
Sbjct: 656 LKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNI 715
Query: 531 YASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
YA + +W ++ M +KK GYS I+
Sbjct: 716 YAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIE 747
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 219/438 (50%), Gaps = 20/438 (4%)
Query: 77 LFDTMPNCPDAFIWTSLIRAFL-SHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC-G 134
+F+ P PD+F++ LI+ + H I Y R+ S F F SVL AC G
Sbjct: 56 VFEAFPY-PDSFMYGVLIKCNVWCHL--LDAAIDLYHRLVSETTQISKFVFPSVLRACAG 112
Query: 135 RVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTA 194
+ G +VHGR+++ G + +++T+LL MY ++G + DA VFDGM RD+VAW+
Sbjct: 113 SREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWST 172
Query: 195 MICGYAKVAMMVEARWLF----DNMGERNSFTWTTMVAGYASCGDMKAAKELYDV----M 246
++ + +V+A +F D+ E ++ T ++V G A G ++ A+ ++ M
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM 232
Query: 247 SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMF 306
D D +++ Y K G++ + R+F+ I ++A +W AM++ Y + ++++ + F
Sbjct: 233 FDLDETLCNSLLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAMISSYNRGEFSEKALRSF 291
Query: 307 KEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTL-IVSNALINMHSK 365
E+ ++ I+ V + +S+C + IR ++ D +S AL+ ++++
Sbjct: 292 SEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAE 351
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
CG + + R++ ++++I+ +A G A+ LF +M + +KP+ T
Sbjct: 352 CGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASS 411
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYA-CIVDLLGRAGQLERAYSLIKENATS 484
++AC ++GLV G QI V + E ++D+ ++G ++ A ++ +
Sbjct: 412 ISACENAGLVPLGK---QIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQ-IKH 467
Query: 485 ADATTWGSLLAACRVHGN 502
TW S+L +GN
Sbjct: 468 RSVVTWNSMLCGFSQNGN 485
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 153/322 (47%), Gaps = 41/322 (12%)
Query: 248 DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFK 307
D D V +++ YG+ GN+++A ++FDG+PV +D W+ +++ +NG + + MFK
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV-RDLVAWSTLVSSCLENGEVVKALRMFK 191
Query: 308 EVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCG 367
+ ++ V M+ + CA+L +R++ ++ I D + N+L+ M+SKCG
Sbjct: 192 CMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCG 251
Query: 368 NIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN 427
++ + R F + ++ +++AMI+++ S+ A+ F M K G++PN VT VL+
Sbjct: 252 DLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLS 311
Query: 428 ACSSSGLVEEG--CRFFQIMTGVFDIEP--------LPEHYA------------------ 459
+C GL+ EG F + +++P L E YA
Sbjct: 312 SCGLIGLIREGKSVHGFAVRR---ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR 368
Query: 460 ------CIVDLLGRAGQLERAYSLIKENATS---ADATTWGSLLAACRVHGNVELGETAA 510
++ L G + +A L ++ T DA T S ++AC G V LG+
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 511 RHLLEIDPEDSGTYVLLANMYA 532
H++ D D L +MY+
Sbjct: 429 GHVIRTDVSDEFVQNSLIDMYS 450
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 220/362 (60%), Gaps = 7/362 (1%)
Query: 224 TTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPV-PQD 282
T ++ Y SCG + A++++D M KD W A++AGYGK+G + EAR L + +P ++
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
+W +++ YA++G A E IE+F+ + ++ EV ++ +SACA L + + +
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQD 402
+++ +R + ++NA+I+M++K GNI A F + R++ T++ +I A HG +
Sbjct: 275 YVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAE 334
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
A+ +F RM K G++PN VTFI +L+ACS G V+ G R F M + I P EHY C++
Sbjct: 335 ALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMI 394
Query: 463 DLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSG 522
DLLGRAG+L A +IK A+A WGSLLAA VH ++ELGE A L++++P +SG
Sbjct: 395 DLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSG 454
Query: 523 TYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE------ISRQQTADSIKK 576
Y+LLAN+Y++ +W + +++ +M G+KK +G S I+ E IS T +++
Sbjct: 455 NYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVER 514
Query: 577 KH 578
H
Sbjct: 515 IH 516
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 196/458 (42%), Gaps = 92/458 (20%)
Query: 66 SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAF--LSHRAHFRHCISTYARMHQSGVLPSG 123
S ++ YA+ +F P CP+ ++ ++IRA L I+ Y ++ P
Sbjct: 58 SNAGHLRYAYSVFTHQP-CPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDT 116
Query: 124 FTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDG 183
FTF VL RV + G+Q+HG++V GF + V T L+ MY G + DAR +FD
Sbjct: 117 FTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDE 176
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG--ERNSFTWTTMVAGYASCGDMKAAKE 241
M +DV W A++ GY KV M EAR L + M RN +WT +++GYA G A E
Sbjct: 177 MLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIE 236
Query: 242 LYDVM----SDKDGVTWVAMIAG-----------------------------------YG 262
++ M + D VT +A+++ Y
Sbjct: 237 VFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYA 296
Query: 263 KLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMV 322
K GN+T+A +F+ + ++ TW ++A A +G+ E + MF + +A ++ +V +
Sbjct: 297 KSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFI 355
Query: 323 GAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR 382
+SAC S G +DL R F++MR +
Sbjct: 356 AILSAC-----------------------------------SHVGWVDLGKRLFNSMRSK 380
Query: 383 -----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEE 437
++ Y MI GK ++A ++ MP K N + +L A + +E
Sbjct: 381 YGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMP---FKANAAIWGSLLAASNVHHDLEL 437
Query: 438 GCRFFQIMTGVFDIEPLPE-HYACIVDLLGRAGQLERA 474
G R ++ + +EP +Y + +L G+ + +
Sbjct: 438 GER---ALSELIKLEPNNSGNYMLLANLYSNLGRWDES 472
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 267/512 (52%), Gaps = 45/512 (8%)
Query: 88 FIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACG-RVPAMVEGKQVH 146
F ++LI+ +S R + Y + + GV G+ +L AC VP +V GK +H
Sbjct: 12 FHVSNLIKNHIS-RGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLH 69
Query: 147 GRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMV 206
++ G + +V ++L+ MY K GCV AR VFD M +R+V W AMI GY V
Sbjct: 70 SESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAV 129
Query: 207 EARWLFDNMGE-RNSFTWTTMVAGYASCGDMKAAKELYDVMS------------------ 247
A LF+ + RN+ TW M+ GY +++ A+EL++ M
Sbjct: 130 LASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVN 189
Query: 248 ---------------DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLAC 292
+K+ W M++GY ++G+V EAR +F + +D W ++A
Sbjct: 190 NRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV-FARDLVIWNTLIAG 248
Query: 293 YAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRT 352
YAQNGY+ + I+ F ++ + V + +SACAQ + + + I +
Sbjct: 249 YAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELN 308
Query: 353 LIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPK 412
VSNALI+M++KCG+++ A F ++ R + ++MI+ A HGK ++A+++F M
Sbjct: 309 QFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMES 368
Query: 413 EGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLE 472
LKP+++TFI VL AC G + EG + F M D++P +H+ C++ LLGR+G+L+
Sbjct: 369 LDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLK 427
Query: 473 RAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTY-----VLL 527
AY L+KE + T G+LL AC+VH + E+ E + ++E + +Y +
Sbjct: 428 EAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENHLASI 486
Query: 528 ANMYASQDKWVGAEVVKKLMSKKGIKKPSGYS 559
+N+YA ++W AE ++ M K+G++K G S
Sbjct: 487 SNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 19/244 (7%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
D IW +LI + + + I + M G P T SS+L+AC + + G++V
Sbjct: 238 DLVIWNTLIAGY-AQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
H + G N+ V AL+ MYAK G + +A VF+ + R V +MI A
Sbjct: 297 HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKG 356
Query: 206 VEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVA----M 257
EA +F M + + T+ ++ G + +++ M +D V +
Sbjct: 357 KEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCL 416
Query: 258 IAGYGKLGNVTEARRLFDGIPV-PQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKI 316
I G+ G + EA RL + V P D A + AC + M E+ + +KI
Sbjct: 417 IHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGAC---------KVHMDTEMAEQVMKI 467
Query: 317 TEVA 320
E A
Sbjct: 468 IETA 471
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 267/562 (47%), Gaps = 56/562 (9%)
Query: 50 YHHFLSPLLL---RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRH 106
YH L P L+ N +E +I + +P W LI ++ + F
Sbjct: 76 YHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLP-------WNVLIASYAKNEL-FEE 127
Query: 107 CISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLG 166
I+ Y RM G+ P FT+ SVL ACG + G+ VHG + S + + V AL+
Sbjct: 128 VIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALIS 187
Query: 167 MYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFT 222
MY + + AR +FD M +RD V+W A+I YA M EA LFD M E + T
Sbjct: 188 MYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 223 WT--------------------------------TMVAGYASC---GDMKAAKELYD--V 245
W M+ G +C G ++ KE++ +
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 246 MSDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGI 303
S DG+ V +I Y K ++ A +F TW ++++ YAQ ++E
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE-ENSLCTWNSIISGYAQLNKSEEAS 366
Query: 304 EMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI-EEGCCDRTLIVSNALINM 362
+ +E+ A + + + + CA++ +++ +I C ++ N+L+++
Sbjct: 367 HLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDV 426
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
++K G I A + M RD TY+++I + G+ A+ LF M + G+KP+ VT
Sbjct: 427 YAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTV 486
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
+ VL+ACS S LV EG R F M + I P +H++C+VDL GRAG L +A +I
Sbjct: 487 VAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP 546
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEV 542
TW +LL AC +HGN ++G+ AA LLE+ PE+ G YVL+ANMYA+ W
Sbjct: 547 YKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAE 606
Query: 543 VKKLMSKKGIKKPSGYSWIQRE 564
V+ +M G+KK G +WI +
Sbjct: 607 VRTIMRDLGVKKDPGCAWIDTD 628
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 208/509 (40%), Gaps = 58/509 (11%)
Query: 98 LSHRAHFRHCISTYA--RMHQSGVLPSGFTF---SSVLNACGRVPAMVEGKQVHGRLVQS 152
L+ H T++ R+ S + +S+L+AC V A + G QVH + S
Sbjct: 13 LASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISS 72
Query: 153 GFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLF 212
G + ++ L+ Y+ +A+ + + D + W +I YAK + E +
Sbjct: 73 GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAY 132
Query: 213 DNMGER----NSFTWTTMVAGYASCGDMKAAKELY---DVMSDKDGV-TWVAMIAGYGKL 264
M + ++FT+ +++ D+ + ++ +V S K + A+I+ Y +
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRF 192
Query: 265 GNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE---------------- 308
N+ ARRLFD + +DA +W A++ CYA G E E+F +
Sbjct: 193 RNMGIARRLFDRM-FERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNII 251
Query: 309 -------------------VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
+R + VAM+ + AC+ + IR+ +
Sbjct: 252 SGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSY 311
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFR 409
D V N LI M+SKC ++ A F + T++++I+ +A+ KS++A L
Sbjct: 312 DGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLRE 371
Query: 410 MPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAG 469
M G +PN +T +L C+ ++ G F + + + +VD+ ++G
Sbjct: 372 MLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSG 431
Query: 470 QLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE-----IDPEDSGTY 524
++ A + + + D T+ SL+ +GN G A E I P+
Sbjct: 432 KIVAAKQ-VSDLMSKRDEVTYTSLIDG---YGNQGEGGVALALFKEMTRSGIKPDHVTVV 487
Query: 525 VLLANMYASQDKWVGAEVVKKLMSKKGIK 553
+L+ S+ G + K+ + GI+
Sbjct: 488 AVLSACSHSKLVHEGERLFMKMQCEYGIR 516
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/495 (30%), Positives = 259/495 (52%), Gaps = 12/495 (2%)
Query: 77 LFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRV 136
LF+ +P D+ + +LI + + I + +M QSG PS FTFS VL A +
Sbjct: 206 LFEEIPE-KDSVTFNTLITGY-EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGL 263
Query: 137 PAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMI 196
G+Q+H V +GF + V +L Y+K V + R +FD M + D V++ +I
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 197 CGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELY--DVMSDKD 250
Y++ + F M +R +F + TM++ A+ ++ ++L+ +++ D
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 251 GVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE 308
+ V +++ Y K EA +F +P + +W A+++ Y Q G G+++F +
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 309 VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGN 368
+R + ++ + + A A + + L I + + L++M++KCG+
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGS 502
Query: 369 IDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNA 428
I A + F M R+ +++A+I+A A++G + AI F +M + GL+P+ V+ +GVL A
Sbjct: 503 IKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTA 562
Query: 429 CSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADAT 488
CS G VE+G +FQ M+ ++ I P +HYAC++DLLGR G+ A L+ E D
Sbjct: 563 CSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622
Query: 489 TWGSLLAACRVHGNVELGETAARHLLEIDP-EDSGTYVLLANMYASQDKWVGAEVVKKLM 547
W S+L ACR+H N L E AA L ++ D+ YV ++N+YA+ +W VKK M
Sbjct: 623 MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAM 682
Query: 548 SKKGIKKPSGYSWIQ 562
++GIKK YSW++
Sbjct: 683 RERGIKKVPAYSWVE 697
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 209/461 (45%), Gaps = 23/461 (4%)
Query: 70 NICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSG--VLPSGFTFS 127
++ A LFD MP+ WT L+ + + +HF + +M +S LP TF+
Sbjct: 94 DVSSARDLFDAMPD-RTVVTWTILM-GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 128 SVLNACGR-VPAMVEGKQVHGRLVQSGFGGNKI--VQTALLGMYAKSGCVCDARDVFDGM 184
++L C VP G QVH V+ GF N V LL Y + + A +F+ +
Sbjct: 152 TLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAK 240
++D V + +I GY K + E+ LF M + + FT++ ++ D +
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 241 ELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQN 296
+L+ + +D ++ Y K V E R LFD +P D ++ +++ Y+Q
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISSYSQA 329
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
+ + F+E++ +S A L ++M L D L V
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
N+L++M++KC + A F ++ R +++A+I+ + + G + LF +M L+
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 417 PNQVTFIGVLNACSS--SGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERA 474
+Q TF VL A +S S L+ + F I +G ++E + + +VD+ + G ++ A
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSG--NLENVFSG-SGLVDMYAKCGSIKDA 506
Query: 475 YSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE 515
+ +E +A +W +L++A +G+ E A ++E
Sbjct: 507 VQVFEE-MPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 184/438 (42%), Gaps = 65/438 (14%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV 119
++L+F S+ + LFD MP F+ +++ + S + + + M G
Sbjct: 290 QILDFYSKHDRVLETRMLFDEMPELD--FVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
F F+++L+ + ++ G+Q+H + + + V +L+ MYAK +A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERN----SFTWTTMVAGYASCGD 235
+F + R V+WTA+I GY + + LF M N T+ T++ AS
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS 467
Query: 236 MKAAKELYDVMSDKDGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
+ K+L+ + + V ++ Y K G++ +A ++F+ +P ++A +W A+++
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALIS 526
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDR 351
+A NG + I F ++ ++ ++ V+++G ++AC
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC----------------------- 563
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYT-----YSAMITAFAEHGKSQDAIDL 406
S CG ++ F M T Y+ M+ +G+ +A L
Sbjct: 564 ------------SHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKL 611
Query: 407 FFRMPKEGLKPNQVTFIGVLNAC---SSSGLVEEGCRFFQIMTGVFDIEPLPE--HYACI 461
MP E P+++ + VLNAC + L E +F +E L + Y +
Sbjct: 612 MDEMPFE---PDEIMWSSVLNACRIHKNQSLAERAAE------KLFSMEKLRDAAAYVSM 662
Query: 462 VDLLGRAGQLERAYSLIK 479
++ AG+ E+ + K
Sbjct: 663 SNIYAAAGEWEKVRDVKK 680
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 119/233 (51%), Gaps = 18/233 (7%)
Query: 206 VEARWL---FDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYG 262
V+AR + FD R++F +V G + AA+++YD M K+ V+ MI+G+
Sbjct: 35 VDARIIKTGFDTDTCRSNF----IVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 263 KLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV-RQAKIKITE-VA 320
K G+V+ AR LFD +P + TW ++ YA+N + E ++F+++ R + + + V
Sbjct: 91 KTGDVSSARDLFDAMP-DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVT 149
Query: 321 MVGAISACAQLRDIRMSNALTD----HIEEGC-CDRTLIVSNALINMHSKCGNIDLAWRE 375
+ C D NA+ ++ G + L VSN L+ + + +DLA
Sbjct: 150 FTTLLPGC---NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVL 206
Query: 376 FSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNA 428
F + +D T++ +IT + + G ++I LF +M + G +P+ TF GVL A
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 166/403 (41%), Gaps = 47/403 (11%)
Query: 137 PA-MVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAM 195
PA ++ ++V R++++GF + ++ + G V AR V+D M ++ V+ M
Sbjct: 26 PATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTM 85
Query: 196 ICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVM------SDK 249
I G+ K + AR LFD M +R TWT ++ YA A +L+ M +
Sbjct: 86 ISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP 145
Query: 250 DGVTWVAMIAGYG----------------KLGNVT---------------EARR------ 272
D VT+ ++ G KLG T E RR
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 273 LFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
LF+ IP +D+ T+ ++ Y ++G E I +F ++RQ+ + ++ G + A L
Sbjct: 206 LFEEIP-EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMIT 392
D + L R V N +++ +SK + F M D +Y+ +I+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 393 AFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIE 452
++++ + + ++ F M G F +L+ ++ ++ G R + +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG-RQLHCQALLATAD 383
Query: 453 PLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLA 495
+ +VD+ + E A LI ++ +W +L++
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEA-ELIFKSLPQRTTVSWTALIS 425
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 165/515 (32%), Positives = 276/515 (53%), Gaps = 18/515 (3%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQ-SGV 119
+++F ++ + A K+FD MP D W ++I F H I + M + G+
Sbjct: 144 LVDFYAKCGELEMAIKVFDEMPK-RDMVAWNAMISGFSLH-CCLTDVIGLFLDMRRIDGL 201
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
P+ T + A GR A+ EGK VHG + GF + +V+T +L +YAKS C+ AR
Sbjct: 202 SPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARR 261
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVA------GYASC 233
VFD ++ V W+AMI GY + M+ EA +F M ++ T VA G A
Sbjct: 262 VFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARF 321
Query: 234 GDMKAAK--ELYDVMSD--KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
GD+ + Y V + D +I+ Y K G++ +A R F I + +D ++ ++
Sbjct: 322 GDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL-KDVISYNSL 380
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH-IEEGC 348
+ N +E +F E+R + I+ ++G ++AC+ L + ++ + + G
Sbjct: 381 ITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGY 440
Query: 349 CDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFF 408
T I NAL++M++KCG +D+A R F TM RD+ +++ M+ F HG ++A+ LF
Sbjct: 441 AVNTSI-CNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFN 499
Query: 409 RMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMT-GVFDIEPLPEHYACIVDLLGR 467
M + G+ P++VT + +L+ACS SGLV+EG + F M+ G F++ P +HY C+ DLL R
Sbjct: 500 SMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLAR 559
Query: 468 AGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLL 527
AG L+ AY + + D G+LL+AC + N ELG ++ + + E + + VLL
Sbjct: 560 AGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLG-ETTESLVLL 618
Query: 528 ANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+N Y++ ++W A ++ + K+G+ K GYSW+
Sbjct: 619 SNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 228/470 (48%), Gaps = 25/470 (5%)
Query: 55 SPLLLRVLNFSSEKSNICYAHKLFDTMPNCP--DAFIWTSLIRAFLSHRAHFRHCISTYA 112
S +L+ + + + + A +FD +P+ P + W +IRA+ S+ + Y
Sbjct: 35 STVLVNLTRLYASCNEVELARHVFDEIPH-PRINPIAWDLMIRAYASND-FAEKALDLYY 92
Query: 113 RMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
+M SGV P+ +T+ VL AC + A+ +GK +H + S F + V TAL+ YAK G
Sbjct: 93 KMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG 152
Query: 173 CVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFT--WTTMVAGY 230
+ A VFD M RD+VAW AMI G++ + + LF +M + + +T+V +
Sbjct: 153 ELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMF 212
Query: 231 ASCGDMKAAKELYDVMS-------DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDA 283
+ G A +E V D V ++ Y K + ARR+FD + ++
Sbjct: 213 PALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD-LDFKKNE 271
Query: 284 STWAAMLACYAQNGYAKEGIEMFKE--VRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
TW+AM+ Y +N KE E+F + V +T VA+ + CA+ D+ +
Sbjct: 272 VTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVH 331
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQ 401
+ + L V N +I+ ++K G++ A+R+FS + +D+ +Y+++IT + + +
Sbjct: 332 CYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPE 391
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG--CRFFQIMTGVFDIEPLPEHYA 459
++ LF M G++P+ T +GVL ACS + G C + ++ G +
Sbjct: 392 ESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--- 448
Query: 460 CIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETA 509
++D+ + G+L+ A + + D +W ++L +HG LG+ A
Sbjct: 449 ALMDMYTKCGKLDVAKRVF-DTMHKRDIVSWNTMLFGFGIHG---LGKEA 494
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 256/496 (51%), Gaps = 11/496 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A K+FD MP D +W ++I + + + +++S T +L A
Sbjct: 173 ARKVFDRMPE-KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAV 231
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ + G Q+H ++G + V T + +Y+K G + +F D+VA+
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYN 291
Query: 194 AMICGYAKVAMMVEARWLFDNM---GERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKD 250
AMI GY + LF + G R +T+V+ G + ++ +
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLSGAR--LRSSTLVSLVPVSGHLMLIYAIHGYCLKSN 349
Query: 251 GVTW----VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMF 306
++ A+ Y KL + AR+LFD P + +W AM++ Y QNG ++ I +F
Sbjct: 350 FLSHASVSTALTTVYSKLNEIESARKLFDESP-EKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 307 KEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKC 366
+E+++++ V + +SACAQL + + + D + + ++ VS ALI M++KC
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 367 GNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVL 426
G+I A R F M ++ T++ MI+ + HG+ Q+A+++F+ M G+ P VTF+ VL
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 427 NACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSAD 486
ACS +GLV+EG F M + EP +HYAC+VD+LGRAG L+RA I+ +
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 487 ATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKL 546
++ W +LL ACR+H + L T + L E+DP++ G +VLL+N++++ + A V++
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQT 648
Query: 547 MSKKGIKKPSGYSWIQ 562
K+ + K GY+ I+
Sbjct: 649 AKKRKLAKAPGYTLIE 664
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 16/239 (6%)
Query: 66 SEKSNICYAHKLFDTMP--NCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSG 123
S+ + I A KLFD P + P W ++I + + IS + M +S P+
Sbjct: 365 SKLNEIESARKLFDESPEKSLPS---WNAMISGY-TQNGLTEDAISLFREMQKSEFSPNP 420
Query: 124 FTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDG 183
T + +L+AC ++ A+ GK VH + + F + V TAL+GMYAK G + +AR +FD
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAA 239
M ++ V W MI GY EA +F M T+ ++ + G +K
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 240 KELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML-AC 292
E+++ M + G + M+ G+ G++ A + + + + +S W +L AC
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 194/451 (43%), Gaps = 46/451 (10%)
Query: 144 QVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVA 203
Q H +++ GF + + T L + G + ARD+F + DV + ++ G++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 204 MMVEARWLFDNMGER-----NSFTWTTMVAGYASCGDMKAAKELYDVM----SDKDGVTW 254
+ +F ++ + NS T+ ++ + D +A + ++ D + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 255 VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE-VRQAK 313
++ Y K V +AR++FD +P +D W M++ Y +N E I++F++ + ++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216
Query: 314 IKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAW 373
++ ++ + A A+L+++R+ + + C V I+++SKCG I +
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 374 REFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVL------- 426
F R D+ Y+AMI + +G+++ ++ LF + G + T + ++
Sbjct: 277 ALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 427 ----------------NACSSSGLVEEGCRFFQIMTG--VFDIEP---LPEHYACIVDLL 465
+A S+ L + +I + +FD P LP + ++
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS-WNAMISGY 395
Query: 466 GRAGQLERAYSLIKE---NATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSG 522
+ G E A SL +E + S + T +L+AC G + LG+ + D E S
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE-SS 454
Query: 523 TYV--LLANMYASQDKWVGAEVVKKLMSKKG 551
YV L MYA A + LM+KK
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/507 (30%), Positives = 266/507 (52%), Gaps = 32/507 (6%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV---LPSGFTFSSVL 130
A ++FD M + D+ + ++I +L + RM + P T SSVL
Sbjct: 261 ARRVFDEM-DVRDSVSYNTMICGYLK-----LEMVEESVRMFLENLDQFKPDLLTVSSVL 314
Query: 131 NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
ACG + + K ++ ++++GF V+ L+ +YAK G + ARDVF+ M+ +D V
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTV 374
Query: 191 AWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYDVM 246
+W ++I GY + ++EA LF M + + T+ +++ D+K K L+
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS-N 433
Query: 247 SDKDGV-----TWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKE 301
K G+ A+I Y K G V ++ ++F + D TW +++ + G
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFGDFAT 492
Query: 302 GIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC------DRTLIV 355
G+++ ++R++++ + + CA L R+ E CC + L +
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGK------EIHCCLLRFGYESELQI 546
Query: 356 SNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
NALI M+SKCG ++ + R F M RD+ T++ MI A+ +G+ + A++ F M K G+
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 416 KPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAY 475
P+ V FI ++ ACS SGLV+EG F+ M + I+P+ EHYAC+VDLL R+ ++ +A
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 476 SLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQD 535
I+ DA+ W S+L ACR G++E E +R ++E++P+D G +L +N YA+
Sbjct: 667 EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALR 726
Query: 536 KWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
KW +++K + K I K GYSWI+
Sbjct: 727 KWDKVSLIRKSLKDKHITKNPGYSWIE 753
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 230/471 (48%), Gaps = 23/471 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++FD MP D W SLI + SH ++ + Y + S ++P FT SSVL A
Sbjct: 160 ARQVFDEMP-VRDLVSWNSLISGYSSH-GYYEEALEIYHELKNSWIVPDSFTVSSVLPAF 217
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
G + + +G+ +HG ++SG +V L+ MY K DAR VFD MD RD V++
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYN 277
Query: 194 AMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCG---DMKAAKELYDVMSDK- 249
MICGY K+ M+ E+ +F ++ T+ + +CG D+ AK +Y+ M
Sbjct: 278 TMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 250 ---DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMF 306
+ +I Y K G++ AR +F+ + +D +W ++++ Y Q+G E +++F
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMEC-KDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 307 KEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL-TDHIEEGCCDRTLIVSNALINMHSK 365
K + + + + + IS +L D++ L ++ I+ G C L VSNALI+M++K
Sbjct: 397 KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGIC-IDLSVSNALIDMYAK 455
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
CG + + + FS+M D T++ +I+A G + + +M K + P+ TF+
Sbjct: 456 CGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA 485
L C+S G + F E + ++++ + G LE + S + E +
Sbjct: 516 LPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENS-SRVFERMSRR 573
Query: 486 DATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSG----TYVLLANMYA 532
D TW ++ A ++G GE A D E SG + V +A +YA
Sbjct: 574 DVVTWTGMIYAYGMYGE---GEKALETF--ADMEKSGIVPDSVVFIAIIYA 619
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 239/481 (49%), Gaps = 25/481 (5%)
Query: 77 LFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRV 136
+F + + ++W S+IRAF S F + Y ++ +S V P +TF SV+ AC +
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAF-SKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 137 PAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMI 196
G V+ +++ GF + V AL+ MY++ G + AR VFD M RD+V+W ++I
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 197 CGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELY----DVMSD 248
GY+ EA ++ + +SFT ++++ + + +K + L+ +
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 249 KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE 308
V ++A Y K T+ARR+FD + V +D+ ++ M+ Y + +E + MF E
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDV-RDSVSYNTMICGYLKLEMVEESVRMFLE 298
Query: 309 -VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCG 367
+ Q K + V+ V + AC LRD+ ++ + +++ + V N LI++++KCG
Sbjct: 299 NLDQFKPDLLTVSSV--LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG 356
Query: 368 NIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN 427
++ A F++M C+D +++++I+ + + G +A+ LF M + + +T++ +++
Sbjct: 357 DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
Query: 428 ACSSSGLVE--EGCRFFQIMTGV-FDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
+ ++ +G I +G+ D+ ++D+ + G++ + + T
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICIDLSV----SNALIDMYAKCGEVGDSLKIFSSMGT- 471
Query: 485 ADATTWGSLLAACRVHGNVELGETAARHLL--EIDPEDSGTYVLLANMYAS-QDKWVGAE 541
D TW ++++AC G+ G + E+ P D T+++ M AS K +G E
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVP-DMATFLVTLPMCASLAAKRLGKE 530
Query: 542 V 542
+
Sbjct: 531 I 531
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 95/182 (52%)
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKI 316
+I Y + +F + ++ W +++ +++NG E +E + ++R++K+
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 317 TEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF 376
+ I ACA L D M + + + I + + L V NAL++M+S+ G + A + F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 377 STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
M RD+ +++++I+ ++ HG ++A++++ + + P+ T VL A + +V+
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 437 EG 438
+G
Sbjct: 225 QG 226
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 278/514 (54%), Gaps = 16/514 (3%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
++N ++ +I A ++F M + D+ W S+I L F + Y M + +L
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTD-KDSVSWNSMITG-LDQNGCFIEAVERYKSMRRHDIL 412
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P FT S L++C + G+Q+HG ++ G N V AL+ +YA++G + + R +
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 181 FDGMDDRDVVAWTAMICGYAKVAM-MVEARWLFDNM---GER-NSFTWTTMVAG-----Y 230
F M + D V+W ++I A+ + EA F N G++ N T++++++ +
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 231 ASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML 290
G L + ++D + T A+IA YGK G + ++F + +D TW +M+
Sbjct: 533 GELGKQIHGLALKNNIAD-EATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
+ Y N + +++ + Q ++ +SA A + + + C +
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 651
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
++V +AL++M+SKCG +D A R F+TM R+ Y++++MI+ +A HG+ ++A+ LF M
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711
Query: 411 PKEG-LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAG 469
+G P+ VTF+GVL+ACS +GL+EEG + F+ M+ + + P EH++C+ D+LGRAG
Sbjct: 712 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAG 771
Query: 470 QLERAYSLIKENATSADATTWGSLLAA-CRVHG-NVELGETAARHLLEIDPEDSGTYVLL 527
+L++ I++ + W ++L A CR +G ELG+ AA L +++PE++ YVLL
Sbjct: 772 ELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLL 831
Query: 528 ANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
NMYA+ +W +K M +KK +GYSW+
Sbjct: 832 GNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 191/392 (48%), Gaps = 27/392 (6%)
Query: 61 VLNFSSEKSNICYAHKLFDTMP--NCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSG 118
++N E + A K+FD MP NC W ++ + S + + M + G
Sbjct: 42 LINAYLETGDSVSARKVFDEMPLRNCVS---WACIVSGY-SRNGEHKEALVFLRDMVKEG 97
Query: 119 VLPSGFTFSSVLNACGRVPA--MVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKS-GCVC 175
+ + + F SVL AC + + ++ G+Q+HG + + + + +V L+ MY K G V
Sbjct: 98 IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVG 157
Query: 176 DARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVAGYA 231
A F ++ ++ V+W ++I Y++ A +F +M G R +T+ ++V
Sbjct: 158 YALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC 217
Query: 232 SCG--DMKAAKELYDVMSDKDGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDAST 285
S D++ +++ + +T + +++ + K G+++ AR++F+ + ++A T
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET-RNAVT 276
Query: 286 WAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISA-----CAQLRDIRMSNAL 340
++ + + +E ++F ++ + I ++ + V +S+ A+ ++ +
Sbjct: 277 LNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREV 335
Query: 341 TDH-IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGK 399
H I G D + + N L+NM++KCG+I A R F M +D ++++MIT ++G
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGC 395
Query: 400 SQDAIDLFFRMPKEGLKPNQVTFIGVLNACSS 431
+A++ + M + + P T I L++C+S
Sbjct: 396 FIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 182/409 (44%), Gaps = 34/409 (8%)
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
H RL ++ + + L+ Y ++G AR VFD M R+ V+W ++ GY++
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 206 VEARWLFDNMGERNSFT-WTTMVAGYASCGDMKA-----AKELYDVMSD----KDGVTWV 255
EA +M + F+ V+ +C ++ + ++++ +M D V
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 256 AMIAGYGK-LGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
+I+ Y K +G+V A F I V +++ +W ++++ Y+Q G + +F ++
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEV-KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 315 KITEVAMVGAISACAQLR--DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLA 372
+ TE ++ L D+R+ + I++ L V + L++ +K G++ A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 373 WREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS 432
+ F+ M R+ T + ++ ++A LF M + + +++ +L++
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEY 321
Query: 433 GLVEE-GCRFFQ------IMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA 485
L EE G + + I TG+ D + +V++ + G + A + T
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDF--MVGIGNGLVNMYAKCGSIADARRVFY-FMTDK 378
Query: 486 DATTWGSLLAACRVHG----NVELGETAARHLLEIDPEDSGTYVLLANM 530
D+ +W S++ +G VE ++ RH +I P G++ L++++
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRH--DILP---GSFTLISSL 422
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/521 (29%), Positives = 288/521 (55%), Gaps = 16/521 (3%)
Query: 53 FLSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYA 112
F + +L +L+ ++ I AHK+F+ + + WTS+I ++ + + +
Sbjct: 174 FDNVVLTGLLDMYAKCGEIKSAHKVFNDI-TLRNVVCWTSMIAGYVKNDL-CEEGLVLFN 231
Query: 113 RMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
RM ++ VL + +T+ +++ AC ++ A+ +GK HG LV+SG + + T+LL MY K G
Sbjct: 232 RMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCG 291
Query: 173 CVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVA 228
+ +AR VF+ D+V WTAMI GY + EA LF M + N T ++++
Sbjct: 292 DISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLS 351
Query: 229 GYASCGDMKAAKELYDVMSDKDGVTW-----VAMIAGYGKLGNVTEARRLFDGIPVPQDA 283
G +++ + ++ +S K G+ W A++ Y K +A+ +F+ + +D
Sbjct: 352 GCGLIENLELGRSVHG-LSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFE-MESEKDI 408
Query: 284 STWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH 343
W ++++ ++QNG E + +F + + V + SACA L + + ++L +
Sbjct: 409 VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY 468
Query: 344 -IEEG-CCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQ 401
++ G ++ V AL++ ++KCG+ A F T+ ++ T+SAMI + + G +
Sbjct: 469 SVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTI 528
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI 461
+++LF M K+ KPN+ TF +L+AC +G+V EG ++F M ++ P +HY C+
Sbjct: 529 GSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 588
Query: 462 VDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDS 521
VD+L RAG+LE+A +I++ D +G+ L C +H +LGE + +L++ P+D+
Sbjct: 589 VDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDA 648
Query: 522 GTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
YVL++N+YAS +W A+ V+ LM ++G+ K +G+S ++
Sbjct: 649 SYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 208/440 (47%), Gaps = 19/440 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A +FD +P PD ++W ++R + ++ + Y + + G FS L AC
Sbjct: 95 ARLVFDQIPE-PDFYLWKVMLRCYCLNKESVE-VVKLYDLLMKHGFRYDDIVFSKALKAC 152
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ + GK++H +LV+ N +V T LL MYAK G + A VF+ + R+VV WT
Sbjct: 153 TELQDLDNGKKIHCQLVKVPSFDN-VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWT 211
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
+MI GY K + E LF+ M E N +T+ T++ + K + + K
Sbjct: 212 SMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV-K 270
Query: 250 DGVTW-----VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
G+ +++ Y K G+++ ARR+F+ D W AM+ Y NG E +
Sbjct: 271 SGIELSSCLVTSLLDMYVKCGDISNARRVFNE-HSHVDLVMWTAMIVGYTHNGSVNEALS 329
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD-HIEEGCCDRTLIVSNALINMH 363
+F++++ +IK V + +S C + ++ + ++ I+ G D V+NAL++M+
Sbjct: 330 LFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMY 387
Query: 364 SKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFI 423
+KC A F +D+ ++++I+ F+++G +A+ LF RM E + PN VT
Sbjct: 388 AKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVA 447
Query: 424 GVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYA-CIVDLLGRAGQLERAYSLIKENA 482
+ +AC+S G + G + + H ++D + G + A LI +
Sbjct: 448 SLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTI 506
Query: 483 TSADATTWGSLLAACRVHGN 502
+ TW +++ G+
Sbjct: 507 EEKNTITWSAMIGGYGKQGD 526
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 175/392 (44%), Gaps = 34/392 (8%)
Query: 129 VLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD 188
+L+ C + ++ +Q HG L +G G+ + T L+ +Y G DAR VFD + + D
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 189 VVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSD 248
W M+ Y VE L+D + ++ F + +V A +KA EL D+ +
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLL-MKHGFRYDDIVFSKA----LKACTELQDLDNG 161
Query: 249 K------------DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQN 296
K D V ++ Y K G + A ++F+ I + ++ W +M+A Y +N
Sbjct: 162 KKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITL-RNVVCWTSMIAGYVKN 220
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
+EG+ +F +R+ + E I AC +L + + + + + +
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
+L++M+ KCG+I A R F+ D+ ++AMI + +G +A+ LF +M +K
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 417 PNQVTFIGVLNACSSSGLVEE-----GCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQL 471
PN VT VL+ C GL+E I G++D +V + + Q
Sbjct: 341 PNCVTIASVLSGC---GLIENLELGRSVHGLSIKVGIWDTNVA----NALVHMYAKCYQ- 392
Query: 472 ERAYSLIKENATSADATTWGSLLAACRVHGNV 503
R + E + D W S+++ +G++
Sbjct: 393 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSI 424
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 165/530 (31%), Positives = 278/530 (52%), Gaps = 33/530 (6%)
Query: 58 LLRVLNFSS---EKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM 114
L R+++F + E N+ YA +F+++ +CP +IW S+IR + S+ + + Y M
Sbjct: 41 LSRLIDFCTTCPETMNLSYARSVFESI-DCPSVYIWNSMIRGY-SNSPNPDKALIFYQEM 98
Query: 115 HQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCV 174
+ G P FTF VL AC + + G VHG +V++GF N V T LL MY G V
Sbjct: 99 LRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEV 158
Query: 175 CDARDVFDGMDDRDVVAWTAMICGYA---KVAMMVEA-RWLFDNMGERNSFTWTTMVAGY 230
VF+ + +VVAW ++I G+ + + +EA R + N + N ++
Sbjct: 159 NYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC 218
Query: 231 ASCGDMKAAKELYDVMS---------DKDGVTWV---AMIAGYGKLGNVTEARRLFDGIP 278
C D+ K + + K G + ++I Y K G++ AR LFDG+P
Sbjct: 219 GRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP 278
Query: 279 VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI---KITEVAMVGA--ISACAQLRD 333
+ +W +++ Y+QNG A+E + MF ++ I K+T ++++ A I C+QL
Sbjct: 279 -ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL-- 335
Query: 334 IRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITA 393
++ ++ + + + AL+NM++K G+ + A + F + +D ++ +I
Sbjct: 336 ---GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIG 392
Query: 394 FAEHGKSQDAIDLFFRMPKEG-LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIE 452
A HG +A+ +F RM ++G P+ +T++GVL ACS GLVEEG R+F M + +E
Sbjct: 393 LASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLE 452
Query: 453 PLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARH 512
P EHY C+VD+L RAG+ E A L+K + WG+LL C +H N+EL +
Sbjct: 453 PTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSM 512
Query: 513 LLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+ E + SG YVLL+N+YA +W +++++ M K + K G+S ++
Sbjct: 513 VAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 178/396 (44%), Gaps = 22/396 (5%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYA---KSGCVCDARDVFD 182
+ +L+ ++VE Q+HG +++S N I + L+ ++ + AR VF+
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 183 GMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKA 238
+D V W +MI GY+ +A + M + + FT+ ++ + D++
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125
Query: 239 AKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYA 294
++ + + + ++ Y G V R+F+ IP + W ++++ +
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLISGFV 184
Query: 295 QNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDR--- 351
N + IE F+E++ +K E MV + AC + +DI ++ D
Sbjct: 185 NNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQ 244
Query: 352 -----TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDL 406
+I++ +LI+M++KCG++ A F M R + +++++IT ++++G +++A+ +
Sbjct: 245 SKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCM 304
Query: 407 FFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLG 466
F M G+ P++VTF+ V+ A G + G ++ ++ +V++
Sbjct: 305 FLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKD-AAIVCALVNMYA 363
Query: 467 RAGQLERAYSLIKENATSADATTWGSLLAACRVHGN 502
+ G E A E+ D W ++ HG+
Sbjct: 364 KTGDAESAKKAF-EDLEKKDTIAWTVVIIGLASHGH 398
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 272/497 (54%), Gaps = 12/497 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++ M N D W SLI+ ++ + ++ + ++ M +G + +S++ A
Sbjct: 339 AERILRQMNNA-DVVTWNSLIKGYVQN-LMYKEALEFFSDMIAAGHKSDEVSMTSIIAAS 396
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
GR+ ++ G ++H +++ G+ N V L+ MY+K C F M D+D+++WT
Sbjct: 397 GRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWT 456
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
+I GYA+ VEA LF ++ ++ + +++ + M KE++ + K
Sbjct: 457 TVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK 516
Query: 250 ---DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMF 306
D V ++ YGK N+ A R+F+ I +D +W +M++ A NG E +E+F
Sbjct: 517 GLLDTVIQNELVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVELF 575
Query: 307 KEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI-EEGCCDRTLIVSNALINMHSK 365
+ + + + VA++ +SA A L + + ++ +G C I + A+++M++
Sbjct: 576 RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI-AVAVVDMYAC 634
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
CG++ A F + + + Y++MI A+ HG + A++LF +M E + P+ ++F+ +
Sbjct: 635 CGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLAL 694
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA 485
L ACS +GL++EG F +IM +++EP PEHY C+VD+LGRA + A+ +K T
Sbjct: 695 LYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEP 754
Query: 486 DATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKK 545
A W +LLAACR H E+GE AA+ LLE++P++ G VL++N++A Q +W E V+
Sbjct: 755 TAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRA 814
Query: 546 LMSKKGIKKPSGYSWIQ 562
M G++K G SWI+
Sbjct: 815 KMKASGMEKHPGCSWIE 831
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 217/455 (47%), Gaps = 22/455 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFT-FSSVLNA 132
A K+FD MP+ AF W ++I A++S+ ++ Y M GV P G + F ++L A
Sbjct: 135 AEKVFDEMPD-RTAFAWNTMIGAYVSN-GEPASALALYWNMRVEGV-PLGLSSFPALLKA 191
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR-DVVA 191
C ++ + G ++H LV+ G+ + AL+ MYAK+ + AR +FDG ++ D V
Sbjct: 192 CAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 251
Query: 192 WTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAG-----YASCGDMKAAKEL 242
W +++ Y+ +E LF M NS+T + + YA G A L
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 311
Query: 243 YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
+ A+IA Y + G + +A R+ + D TW +++ Y QN KE
Sbjct: 312 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKGYVQNLMYKEA 370
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+E F ++ A K EV+M I+A +L ++ L ++ + D L V N LI+M
Sbjct: 371 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 430
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+SKC R F M +D+ +++ +I +A++ +A++LF + K+ ++ +++
Sbjct: 431 YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490
Query: 423 IGVLNACS--SSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE 480
+L A S S L+ + + G+ D E +VD+ G+ + A + + E
Sbjct: 491 GSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE----LVDVYGKCRNMGYA-TRVFE 545
Query: 481 NATSADATTWGSLLAACRVHGNVELGETAARHLLE 515
+ D +W S++++ ++GN R ++E
Sbjct: 546 SIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/552 (23%), Positives = 250/552 (45%), Gaps = 67/552 (12%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+++ ++ ++ A +LFD DA +W S++ ++ S + + MH +G
Sbjct: 223 LVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY-STSGKSLETLELFREMHMTGPA 281
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKI-VQTALLGMYAKSGCVCDARD 179
P+ +T S L AC GK++H +++S +++ V AL+ MY + G + A
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGD 235
+ M++ DVV W ++I GY + M EA F +M + + + T+++A +
Sbjct: 342 ILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN 401
Query: 236 MKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
+ A EL+ + D + +I Y K R F + +D +W ++A
Sbjct: 402 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH-DKDLISWTTVIA 460
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI-EEGCCD 350
YAQN E +E+F++V + +++I E+ + + A + L+ + + + HI +G D
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD 520
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
++ N L++++ KC N+ A R F +++ +D+ ++++MI++ A +G +A++LF RM
Sbjct: 521 --TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM 578
Query: 411 PKEGLKPNQVTFIGVLNACSSSGLVEEG------------CRFFQIMTGVFDIEPLPEHY 458
+ GL + V + +L+A +S + +G C I V D+ Y
Sbjct: 579 VETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDM------Y 632
Query: 459 AC---------IVDLLGRAGQLE-----RAYSL-------------IKENATSADATTWG 491
AC + D + R G L+ AY + ++ S D ++
Sbjct: 633 ACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFL 692
Query: 492 SLLAACRVHGNVELGE---TAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMS 548
+LL AC G ++ G H E++P YV L +M + V A K+M
Sbjct: 693 ALLYACSHAGLLDEGRGFLKIMEHEYELEPWPE-HYVCLVDMLGRANCVVEAFEFVKMMK 751
Query: 549 KKGIKKPSGYSW 560
+P+ W
Sbjct: 752 ----TEPTAEVW 759
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 156/314 (49%), Gaps = 12/314 (3%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKI--VQTALLGMYAKSGCVCDARDVFDG 183
F+ VL CG+ A+ +G+Q+H R+ ++ F ++ + L+ MY K G + DA VFD
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKT-FPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG-ERNSFTWTTMVAGYASCG---DMKAA 239
M DR AW MI Y A L+ NM E ++ A +C D+++
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 240 KELYDVMSD----KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQ 295
EL+ ++ G A+++ Y K +++ ARRLFDG DA W ++L+ Y+
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 296 NGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRT-LI 354
+G + E +E+F+E+ +V A++AC ++ + + + + L
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 355 VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG 414
V NALI M+++CG + A R M D+ T++++I + ++ ++A++ F M G
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Query: 415 LKPNQVTFIGVLNA 428
K ++V+ ++ A
Sbjct: 382 HKSDEVSMTSIIAA 395
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 355 VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG 414
++ L+ M+ KCG++D A + F M R + ++ MI A+ +G+ A+ L++ M EG
Sbjct: 118 LAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG 177
Query: 415 LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV------FDIEPLPEHYACIVDLLGRA 468
+ +F +L AC+ + G ++ + F + L YA +
Sbjct: 178 VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA-------KN 230
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHG 501
L A L DA W S+L++ G
Sbjct: 231 DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/504 (31%), Positives = 268/504 (53%), Gaps = 19/504 (3%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A LFD D W SLI ++ A ++ A+MH+ G+ + + SVL AC
Sbjct: 202 AMSLFDRCDE-RDQVSWNSLISGYVRVGAA-EEPLNLLAKMHRDGLNLTTYALGSVLKAC 259
Query: 134 --GRVPAMVE-GKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
+E G +H + G + +V+TALL MYAK+G + +A +F M ++VV
Sbjct: 260 CINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVV 319
Query: 191 AWTAMICGYAKVAMMV-----EARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKE 241
+ AMI G+ ++ + EA LF +M R + T++ ++ ++ ++ ++
Sbjct: 320 TYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQ 379
Query: 242 LYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
++ ++ D A+I Y +G+ + + F QD ++W +M+ C+ QN
Sbjct: 380 IHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS-KQDIASWTSMIDCHVQNE 438
Query: 298 YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSN 357
+ ++F+++ + I+ E + +SACA + + + + D V
Sbjct: 439 QLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKT 498
Query: 358 ALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKP 417
+ I+M++K GN+ LA + F ++ D+ TYSAMI++ A+HG + +A+++F M G+KP
Sbjct: 499 SSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558
Query: 418 NQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL 477
NQ F+GVL AC GLV +G ++FQ M + I P +H+ C+VDLLGR G+L A +L
Sbjct: 559 NQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL 618
Query: 478 IKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKW 537
I + TW +LL++CRV+ + +G+ A L+E++PE SG+YVLL N+Y
Sbjct: 619 ILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVN 678
Query: 538 VGAEVVKKLMSKKGIKKPSGYSWI 561
AE V++LM +G+KK SWI
Sbjct: 679 SSAEEVRELMRDRGVKKEPALSWI 702
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 158/317 (49%), Gaps = 17/317 (5%)
Query: 138 AMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMIC 197
++V GK HG +++S + LL MY K + AR +FD M +R+++++ ++I
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 198 GYAKVAMMVEARWLFDNMGERN----SFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVT 253
GY ++ +A LF E N FT+ + D+ + L+ ++
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 254 WV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
V +I Y K G + +A LFD +D +W ++++ Y + G A+E + + ++
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISGYVRVGAAEEPLNLLAKM 240
Query: 310 RQAKIKITEVAMVGAISACA-QLRD--IRMSNALTDHIEEGCCDRTLIVSNALINMHSKC 366
+ + +T A+ + AC L + I A+ + + + ++V AL++M++K
Sbjct: 241 HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKN 300
Query: 367 GNIDLAWREFSTMRCRDMYTYSAMITAFAEHGK-----SQDAIDLFFRMPKEGLKPNQVT 421
G++ A + FS M +++ TY+AMI+ F + + S +A LF M + GL+P+ T
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPST 360
Query: 422 FIGVLNACSSSGLVEEG 438
F VL ACS++ +E G
Sbjct: 361 FSVVLKACSAAKTLEYG 377
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 153/335 (45%), Gaps = 36/335 (10%)
Query: 261 YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVA 320
Y K + AR+LFD +P ++ ++ ++++ Y Q G+ ++ +E+F E R+A +K+ +
Sbjct: 92 YCKCRELGFARQLFDRMP-ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 321 MVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMR 380
GA+ C + D+ + L + + + + N LI+M+SKCG +D A F
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 381 CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACS---SSGLVEE 437
RD +++++I+ + G +++ ++L +M ++GL VL AC + G +E+
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 438 GCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAAC 497
G T +E ++D+ + G L+ A L S + T+ ++++
Sbjct: 271 GMA-IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSL-MPSKNVVTYNAMIS-- 326
Query: 498 RVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIK-KPS 556
G +++ E D S + L + M ++G++ PS
Sbjct: 327 ---GFLQMDEIT-------DEASSEAFKLFMD-----------------MQRRGLEPSPS 359
Query: 557 GYSWIQREISRQQTADSIKKKHFNLLADFSQSDIF 591
+S + + S +T + ++ H + + QSD F
Sbjct: 360 TFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 362 MHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVT 421
M+ KC + A + F M R++ +++++I+ + + G + A++LF + LK ++ T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI---VDLLGRAGQLERAYSLI 478
+ G L C ++ G +++ G+ + L + I +D+ + G+L++A SL
Sbjct: 151 YAGALGFCGERCDLDLG----ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF 206
Query: 479 KENATSADATTWGSLLAA 496
+ D +W SL++
Sbjct: 207 -DRCDERDQVSWNSLISG 223
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/510 (30%), Positives = 276/510 (54%), Gaps = 15/510 (2%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+++ S+ +I + ++F+ + + I +I +F S I + RM Q G+
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSF-SQSKKPGKAIRLFTRMLQEGLR 450
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
F+ S+L+ + + GKQVHG ++SG + V ++L +Y+K G + ++ +
Sbjct: 451 TDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM-GERNSFTWTTMVAGYASCGD---M 236
F G+ +D W +MI G+ + + EA LF M + S +T+ A C +
Sbjct: 508 FQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSL 567
Query: 237 KAAKELYDVM----SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLAC 292
KE++ DK A++ Y K G++ AR+++D +P D + +++++
Sbjct: 568 PRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISG 626
Query: 293 YAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEE-GCCDR 351
Y+Q+G ++G +F+++ + + A+ + A A + + + +I + G C
Sbjct: 627 YSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTE 686
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
V ++L+ M+SK G+ID + FS + D+ ++A+I ++A+HGK+ +A+ ++ M
Sbjct: 687 P-SVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMK 745
Query: 412 KEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQL 471
++G KP++VTF+GVL+ACS GLVEE M + IEP HY C+VD LGR+G+L
Sbjct: 746 EKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRL 805
Query: 472 ERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMY 531
A S I DA WG+LLAAC++HG VELG+ AA+ +E++P D+G Y+ L+N+
Sbjct: 806 REAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNIL 865
Query: 532 ASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
A +W E +KLM G++K G+S +
Sbjct: 866 AEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 211/472 (44%), Gaps = 46/472 (9%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++F +PN P WT ++ + F + + M SGV + T +SV++AC
Sbjct: 304 AMEVFSRIPN-PSVVSWTVMLSGYTKSNDAFS-ALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDD---RDVV 190
GR + E QVH + +SGF + V AL+ MY+KSG + + VF+ +DD +++V
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV 421
Query: 191 AWTAMICGYAKVAMMVEARWLFDNM---GERNSFTWTTMVAGYASCGDMKAAKELYDVMS 247
MI +++ +A LF M G R + C ++ Y + S
Sbjct: 422 --NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKS 479
Query: 248 D--KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
D ++ Y K G++ E+ +LF GIP +D + WA+M++ + + GY +E I +
Sbjct: 480 GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF-KDNACWASMISGFNEYGYLREAIGL 538
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
F E+ E + ++ C+ + + + D+ + + +AL+NM+SK
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
CG++ LA + + + D + S++I+ +++HG QD LF M G + +
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 426 LNACSSS----------------GLVEE---GCRFFQIMTGVFDIEPLPEHYACI--VDL 464
L A + S GL E G + + I+ + ++ I DL
Sbjct: 659 LKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDL 718
Query: 465 L------------GRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVE 504
+ G+A + + Y+L+KE D T+ +L+AC G VE
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVE 770
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 239/513 (46%), Gaps = 46/513 (8%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+L++ S ++ A KLFDT+P PD +I + HR F + +++MH G
Sbjct: 90 LLSWYSNSGSMADAAKLFDTIPQ-PDVVSCNIMISGYKQHRL-FEESLRFFSKMHFLGFE 147
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
+ ++ SV++AC + A + + V ++ G+ ++V++AL+ +++K+ DA V
Sbjct: 148 ANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKV 207
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDM 236
F +V W +I G + LF M + +S+T+++++A AS +
Sbjct: 208 FRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKL 267
Query: 237 KAAKELYDVM---SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACY 293
+ K + + +D A++ Y K G++ EA +F IP P S W ML+ Y
Sbjct: 268 RFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS-WTVMLSGY 326
Query: 294 AQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTL 353
++ A +E+FKE+R + ++I + ISAC + + ++ + + +
Sbjct: 327 TKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDS 386
Query: 354 IVSNALINMHSKCGNIDLAWREFSTM-RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPK 412
V+ ALI+M+SK G+IDL+ + F + + + MIT+F++ K AI LF RM +
Sbjct: 387 SVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQ 446
Query: 413 EGLKPNQVTFIGVLNACS-------------SSGLVEE---GCRFFQIMTGVFDIE---- 452
EGL+ ++ + +L+ SGLV + G F + + +E
Sbjct: 447 EGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 453 -----PLPEH--YACIVDLLGRAGQLERAYSLIKE---NATSADATTWGSLLAACRVHGN 502
P ++ +A ++ G L A L E + TS D +T ++L C H +
Sbjct: 507 LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 503 VELGETAARHLLE--IDPE-DSGTYVLLANMYA 532
+ G+ + L ID D G+ L NMY+
Sbjct: 567 LPRGKEIHGYTLRAGIDKGMDLGS--ALVNMYS 597
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 134/298 (44%), Gaps = 19/298 (6%)
Query: 163 ALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ER 218
+LL Y+ SG + DA +FD + DVV+ MI GY + + E+ F M E
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 219 NSFTWTTMVAGYASCGDMKAA--KELYDVMSDKDG-----VTWVAMIAGYGKLGNVTEAR 271
N ++ +++ ++C ++A EL + K G V A+I + K +A
Sbjct: 149 NEISYGSVI---SACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAY 205
Query: 272 RLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQL 331
++F + + W ++A +N ++F E+ K ++ACA L
Sbjct: 206 KVFRD-SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASL 264
Query: 332 RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMI 391
+R + + + C + V A++++++KCG++ A FS + + +++ M+
Sbjct: 265 EKLRFGKVVQARVIK-CGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323
Query: 392 TAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVF 449
+ + + + A+++F M G++ N T V++AC +V C Q+ VF
Sbjct: 324 SGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV---CEASQVHAWVF 378
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 109/227 (48%), Gaps = 8/227 (3%)
Query: 329 AQLRDIRMSNALTDHI-EEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTY 387
++L ++R + L H+ + ++ +L++ +S G++ A + F T+ D+ +
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSS--SGLVEEGCRFFQIM 445
+ MI+ + +H ++++ F +M G + N++++ V++ACS+ + L E I
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 446 TGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLA-ACRVHGNVE 504
G F E + + ++D+ + + E AY + ++ + SA+ W +++A A R
Sbjct: 179 MGYFFYEVVE---SALIDVFSKNLRFEDAYKVFRD-SLSANVYCWNTIIAGALRNQNYGA 234
Query: 505 LGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKG 551
+ + + DS TY + AS +K +VV+ + K G
Sbjct: 235 VFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG 281
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 240/472 (50%), Gaps = 43/472 (9%)
Query: 135 RVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGM---YAKSGCVCDARDVFDGMDDRDVVA 191
R E KQ+H R++++G + T L S + A+ VFDG D D
Sbjct: 23 RCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFL 82
Query: 192 WTAMICGYA-----KVAMMVEARWL---------------------------------FD 213
W MI G++ + ++++ R L
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 214 NMG-ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARR 272
+G E + + +++ YA G+ K A L+D + + D V+W ++I GY K G + A
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 273 LFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
LF + ++A +W M++ Y Q KE +++F E++ + ++ V++ A+SACAQL
Sbjct: 203 LFRKM-AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 261
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMIT 392
+ + ++ + ++ LI+M++KCG ++ A F ++ + + ++A+I+
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 393 AFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIE 452
+A HG ++AI F M K G+KPN +TF VL ACS +GLVEEG F M ++++
Sbjct: 322 GYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLK 381
Query: 453 PLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARH 512
P EHY CIVDLLGRAG L+ A I+E +A WG+LL ACR+H N+ELGE
Sbjct: 382 PTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEI 441
Query: 513 LLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
L+ IDP G YV AN++A KW A ++LM ++G+ K G S I E
Sbjct: 442 LIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLE 493
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 166/415 (40%), Gaps = 75/415 (18%)
Query: 73 YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNA 132
YA +FD PD F+W +IR F R + Y RM S + +TF S+L A
Sbjct: 67 YAQIVFDGFDR-PDTFLWNLMIRGFSCSDEPERSLL-LYQRMLCSSAPHNAYTFPSLLKA 124
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
C + A E Q+H ++ + G+ + +L+ YA +G A +FD + + D V+W
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 193 TAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK--- 249
++I GY K M A LF M E+N+ +WTTM++GY K A +L+ M +
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 250 ------------------------------------DGVTWVAMIAGYGKLGNVTEARRL 273
D V +I Y K G + EA +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 274 FDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRD 333
F I + W A+++ YA +G+ +E I F E+++ IK + ++AC
Sbjct: 305 FKNIK-KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC----- 358
Query: 334 IRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITA 393
+ T +EEG LI + + + K + Y ++
Sbjct: 359 -----SYTGLVEEG----KLIFYSMERDYNLK----------------PTIEHYGCIVDL 393
Query: 394 FAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV 448
G +A MP LKPN V + +L AC +E G +I+ +
Sbjct: 394 LGRAGLLDEAKRFIQEMP---LKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 265/494 (53%), Gaps = 10/494 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++FD M + D W SL+ + + M + GV +F+SV+ C
Sbjct: 228 ARRVFDEM-SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ +Q+HG ++ G+ V L+ Y+K G + + VF M +R+VV+WT
Sbjct: 287 CHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWT 346
Query: 194 AMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVT 253
MI A+ + FD + N T+ ++ +K +++ + V+
Sbjct: 347 TMISSNKDDAVSIFLNMRFDGV-YPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVS 405
Query: 254 WVAM----IAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
++ I Y K + +A++ F+ I ++ +W AM++ +AQNG++ E ++MF
Sbjct: 406 EPSVGNSFITLYAKFEALEDAKKAFEDITF-REIISWNAMISGFAQNGFSHEALKMFLSA 464
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALT--DHIEEGCCDRTLIVSNALINMHSKCG 367
A+ E ++A A DI + H+ + + +VS+AL++M++K G
Sbjct: 465 -AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRG 523
Query: 368 NIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN 427
NID + + F+ M ++ + ++++I+A++ HG + ++LF +M KE + P+ VTF+ VL
Sbjct: 524 NIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLT 583
Query: 428 ACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADA 487
AC+ G+V++G F +M V+++EP EHY+C+VD+LGRAG+L+ A L+ E
Sbjct: 584 ACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGE 643
Query: 488 TTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLM 547
+ S+L +CR+HGNV++G A +E+ PE SG+YV + N+YA +++W A ++K M
Sbjct: 644 SMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAM 703
Query: 548 SKKGIKKPSGYSWI 561
KK + K +G+SWI
Sbjct: 704 RKKNVSKEAGFSWI 717
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 214/450 (47%), Gaps = 39/450 (8%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVL 130
+C L D PD W +++ F ++ + RM +GV+ FT+S+ L
Sbjct: 131 LCIFENLVD-----PDVVSWNTILSGFDDNQIALNFVV----RMKSAGVVFDAFTYSTAL 181
Query: 131 NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
+ C + G Q+ +V++G + +V + + MY++SG AR VFD M +D++
Sbjct: 182 SFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMI 241
Query: 191 AWTAMICGYAKVAMM-VEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDV 245
+W +++ G ++ EA +F +M E + ++T+++ D+K A++++ +
Sbjct: 242 SWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGL 301
Query: 246 MSDKDGVTWVA----MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKE 301
+ + + +++ Y K G + + +F + ++ +W M++ +
Sbjct: 302 CIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTMISSNKD-----D 355
Query: 302 GIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS----- 356
+ +F +R + EV VG I+A I+ L H G C +T VS
Sbjct: 356 AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIK--EGLKIH---GLCIKTGFVSEPSVG 410
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
N+ I +++K ++ A + F + R++ +++AMI+ FA++G S +A+ +F E +
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM- 469
Query: 417 PNQVTFIGVLNACSSSG--LVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERA 474
PN+ TF VLNA + + V++G R + + + P + ++D+ + G ++ +
Sbjct: 470 PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL-GLNSCPVVSSALLDMYAKRGNIDES 528
Query: 475 YSLIKENATSADATTWGSLLAACRVHGNVE 504
+ E + + W S+++A HG+ E
Sbjct: 529 EKVFNE-MSQKNQFVWTSIISAYSSHGDFE 557
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 180/374 (48%), Gaps = 30/374 (8%)
Query: 142 GKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAK 201
G Q+HG SGF V A++GMY K+G +A +F+ + D DVV+W ++ G+
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 154
Query: 202 -------VAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS----DKD 250
V M A +FD +FT++T ++ +L + + D
Sbjct: 155 NQIALNFVVRMKSAGVVFD------AFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESD 208
Query: 251 GVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG-YAKEGIEMFKEV 309
V + I Y + G+ ARR+FD + +D +W ++L+ +Q G + E + +F+++
Sbjct: 209 LVVGNSFITMYSRSGSFRGARRVFDEMSF-KDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
+ +++ V+ I+ C D++++ + + + L V N L++ +SKCG +
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 370 DLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNAC 429
+ F M R++ +++ MI++ DA+ +F M +G+ PN+VTF+G++NA
Sbjct: 328 EAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAV 382
Query: 430 SSSGLVEEGCRF--FQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADA 487
+ ++EG + I TG F EP + + L + LE A E+ T +
Sbjct: 383 KCNEQIKEGLKIHGLCIKTG-FVSEPSVGN--SFITLYAKFEALEDAKKAF-EDITFREI 438
Query: 488 TTWGSLLAACRVHG 501
+W ++++ +G
Sbjct: 439 ISWNAMISGFAQNG 452
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 266/513 (51%), Gaps = 16/513 (3%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV 119
++++ S + +I YA ++FD M W SLI + HR + + Y M + V
Sbjct: 104 KLVDASLKCGDIDYARQVFDGMSE-RHIVTWNSLIAYLIKHRRS-KEAVEMYRLMITNNV 161
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFG-GNKIVQTALLGMYAKSGCVCDAR 178
LP +T SSV A + E ++ HG V G N V +AL+ MY K G +A+
Sbjct: 162 LPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK 221
Query: 179 DVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCG 234
V D ++++DVV TA+I GY++ EA F +M + N +T+ +++ +
Sbjct: 222 LVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLK 281
Query: 235 DMKAAKELYDVMSDKDG-----VTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
D+ K ++ +M K G + +++ Y + V ++ R+F I P S W ++
Sbjct: 282 DIGNGKLIHGLMV-KSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS-WTSL 339
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
++ QNG + + F+++ + IK + A+ C+ L + + +
Sbjct: 340 ISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF 399
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFR 409
DR + LI+++ KCG D+A F T+ D+ + + MI ++A++G ++A+DLF R
Sbjct: 400 DRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFER 459
Query: 410 MPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAG 469
M GL+PN VT + VL AC++S LVEEGC F I +HYAC+VDLLGRAG
Sbjct: 460 MINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAG 518
Query: 470 QLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLAN 529
+LE A L E + D W +LL+AC+VH VE+ E R +LEI+P D GT +L++N
Sbjct: 519 RLEEAEMLTTE-VINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSN 577
Query: 530 MYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+YAS KW +K M +KK SW++
Sbjct: 578 LYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVE 610
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 168/366 (45%), Gaps = 26/366 (7%)
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGF----GGNKIVQTALLGMYAKSGCVC 175
L + FS +L C ++ K + +++SGF G+K+V +L K G +
Sbjct: 62 LTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASL-----KCGDID 116
Query: 176 DARDVFDGMDDRDVVAWTAMICGYAKVAMMVEA----RWLFDNMGERNSFTWTTMVAGYA 231
AR VFDGM +R +V W ++I K EA R + N + +T +++ ++
Sbjct: 117 YARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFS 176
Query: 232 SCGDMKAAKELYDV-----MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTW 286
K A+ + + + + A++ Y K G EA+ + D + +D
Sbjct: 177 DLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVE-EKDVVLI 235
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEE 346
A++ Y+Q G E ++ F+ + K++ E + +C L+DI + + +
Sbjct: 236 TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Query: 347 GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDL 406
+ L +L+ M+ +C +D + R F + + +++++I+ ++G+ + A+
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE 355
Query: 407 FFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV-FDIEPLPEHYA--CIVD 463
F +M ++ +KPN T L CS+ + EEG + I+T FD + YA ++D
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFD----RDKYAGSGLID 411
Query: 464 LLGRAG 469
L G+ G
Sbjct: 412 LYGKCG 417
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 255/489 (52%), Gaps = 10/489 (2%)
Query: 84 CPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGK 143
C D +W ++ ++ + +F + + M +G +P+ +TF + L A + A K
Sbjct: 209 CKDIVVWAGIVSCYVEN-GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAK 267
Query: 144 QVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVA 203
VHG+++++ + + V LL +Y + G + DA VF+ M DVV W+ MI + +
Sbjct: 268 GVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNG 327
Query: 204 MMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTWV 255
EA LF M E N FT ++++ G A ++L+ ++ D D
Sbjct: 328 FCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN 387
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
A+I Y K + A +LF + + S W ++ Y G + MF+E + ++
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVS-WNTVIVGYENLGEGGKAFSMFREALRNQVS 446
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWRE 375
+TEV A+ ACA L + + + + + + VSN+LI+M++KCG+I A
Sbjct: 447 VTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSV 506
Query: 376 FSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLV 435
F+ M D+ +++A+I+ ++ HG + A+ + M KPN +TF+GVL+ CS++GL+
Sbjct: 507 FNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLI 566
Query: 436 EEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLA 495
++G F+ M IEP EHY C+V LLGR+GQL++A LI+ W ++L+
Sbjct: 567 DQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 496 ACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKP 555
A N E +A +L+I+P+D TYVL++NMYA +W ++K M + G+KK
Sbjct: 627 ASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKE 686
Query: 556 SGYSWIQRE 564
G SWI+ +
Sbjct: 687 PGLSWIEHQ 695
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 206/448 (45%), Gaps = 20/448 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A LFD MP + T L+ + I Y+R+H+ G + F+S L
Sbjct: 103 ALNLFDEMPERNNVSFVT------LAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ +H +V+ G+ N V AL+ Y+ G V AR VF+G+ +D+V W
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
++ Y + ++ L M N++T+ T + G AK ++ +
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 250 ----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
D V ++ Y +LG++++A ++F+ +P D W+ M+A + QNG+ E +++
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIARFCQNGFCNEAVDL 335
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
F +R+A + E + ++ CA + + L + + D + VSNALI++++K
Sbjct: 336 FIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAK 395
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
C +D A + F+ + ++ +++ +I + G+ A +F + + +VTF
Sbjct: 396 CEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSA 455
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA 485
L AC+S ++ G + + + + + + ++D+ + G ++ A S+ E T
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LIDMYAKCGDIKFAQSVFNEMET-I 513
Query: 486 DATTWGSLLAACRVHGNVELGETAARHL 513
D +W +L++ HG LG A R L
Sbjct: 514 DVASWNALISGYSTHG---LGRQALRIL 538
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 177/387 (45%), Gaps = 14/387 (3%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD 185
+ ++L C + + K +H +++ G + LL Y K+G DA ++FD M
Sbjct: 52 YGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP 111
Query: 186 DRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDV 245
+R+ V++ + GYA + L E N +T+ + + S + L+
Sbjct: 112 ERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSP 171
Query: 246 MS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKE 301
+ D + A+I Y G+V AR +F+GI + +D WA +++CY +NGY ++
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI-LCKDIVVWAGIVSCYVENGYFED 230
Query: 302 GIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALIN 361
+++ +R A A+ A L + + I + C V L+
Sbjct: 231 SLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQ 290
Query: 362 MHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVT 421
++++ G++ A++ F+ M D+ +S MI F ++G +A+DLF RM + + PN+ T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGV-FDIEPLPEHYACIVDLLGRAGQLERAYSLIKE 480
+LN C+ G + ++ V FD++ + ++D+ + +++ A L E
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN--ALIDVYAKCEKMDTAVKLFAE 408
Query: 481 NATSADATTWGSLLAACRVHGNVELGE 507
+S + +W +++ G LGE
Sbjct: 409 -LSSKNEVSWNTVIV-----GYENLGE 429
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 243/433 (56%), Gaps = 13/433 (3%)
Query: 142 GKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAK 201
G+Q HG + ++ ++ +L+ MY++ G V + VF M +RDVV+W MI + +
Sbjct: 337 GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQ 396
Query: 202 VAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAM 257
+ E L M ++ + T T +++ ++ + + K+ + + + G+ + M
Sbjct: 397 NGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLI-RQGIQFEGM 455
Query: 258 ----IAGYGKLGNVTEARRLFDGIPVPQ-DASTWAAMLACYAQNGYAKEGIEMFKEVRQA 312
I Y K G + +++LF+G + D +TW +M++ Y QNG+ ++ +F+++ +
Sbjct: 456 NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQ 515
Query: 313 KIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLA 372
I+ V + + AC+Q+ + + L D+ + V++AL++M+SK G I A
Sbjct: 516 NIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYA 575
Query: 373 WREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS 432
FS + R+ TY+ MI + +HG + AI LF M + G+KP+ +TF+ VL+ACS S
Sbjct: 576 EDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYS 635
Query: 433 GLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSAD-ATTWG 491
GL++EG + F+ M V++I+P EHY CI D+LGR G++ AY +K + A WG
Sbjct: 636 GLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWG 695
Query: 492 SLLAACRVHGNVELGETAARHLLEIDPED--SGTYVLLANMYASQDKWVGAEVVKKLMSK 549
SLL +C++HG +EL ET + L + D SG VLL+NMYA + KW + V++ M +
Sbjct: 696 SLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMRE 755
Query: 550 KGIKKPSGYSWIQ 562
KG+KK G S I+
Sbjct: 756 KGLKKEVGRSGIE 768
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 227/483 (46%), Gaps = 29/483 (6%)
Query: 55 SPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM 114
+P + L+ + N A +LFD +P P +W ++I F+ + + Y+RM
Sbjct: 39 TPSIRSRLSKICQDGNPQLARQLFDAIPK-PTTVLWNTIIIGFICNNLP-HEALLFYSRM 96
Query: 115 HQSGVLPS--GFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
++ + +T+SS L AC + GK VH L++ +++V +L+ MY
Sbjct: 97 KKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCL 156
Query: 173 CVCD------ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFT 222
D R VFD M ++VVAW +I Y K EA F M + + +
Sbjct: 157 NAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVS 216
Query: 223 WTTMVAGYASCGDMKAAKELYDVMSD------KDGVTWVAMIAGYGKLGNVTEARRLFDG 276
+ + + +K A Y +M KD + I+ Y +LG++ +RR+FD
Sbjct: 217 FVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDS 276
Query: 277 IPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAK-IKITEVAMVGAISACAQLRDIR 335
V ++ W M+ Y QN E IE+F E +K I EV + A SA + L+ +
Sbjct: 277 C-VERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVE 335
Query: 336 MSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFA 395
+ + + + +++ N+L+ M+S+CG++ ++ F +MR RD+ +++ MI+AF
Sbjct: 336 LGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFV 395
Query: 396 EHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG--CRFFQIMTGVFDIEP 453
++G + + L + M K+G K + +T +L+A S+ E G F I G+ E
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI-QFEG 454
Query: 454 LPEHYACIVDLLGRAGQLERAYSLIKENATSA-DATTWGSLLAACRVHGNVELGETAARH 512
+ + ++D+ ++G + + L + + + D TW S+++ +G+ E R
Sbjct: 455 MNSY---LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRK 511
Query: 513 LLE 515
+LE
Sbjct: 512 MLE 514
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/492 (30%), Positives = 251/492 (51%), Gaps = 35/492 (7%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSG-VLPSGFTFSSV 129
I A LFD M + WT++I + F + RM Q G V + T + +
Sbjct: 224 IVDARSLFDRMTE-RNVITWTAMIDGYF-KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 130 LNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDV 189
AC EG Q+HG + + + + +L+ MY+K G + +A+ VF M ++D
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS 341
Query: 190 VAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
V+W ++I G + + EA LF+ M ++ +WT M+ G++ G++ EL+ +M +K
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEK 401
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
D +TW AMI+ + NGY +E + F ++
Sbjct: 402 DNITWTAMISA--------------------------------FVSNGYYEEALCWFHKM 429
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
Q ++ +SA A L D+ + + + L V N+L++M+ KCGN
Sbjct: 430 LQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNT 489
Query: 370 DLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNAC 429
+ A++ FS + ++ +Y+ MI+ ++ +G + A+ LF + G +PN VTF+ +L+AC
Sbjct: 490 NDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC 549
Query: 430 SSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATT 489
G V+ G ++F+ M ++IEP P+HYAC+VDLLGR+G L+ A +LI +
Sbjct: 550 VHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGV 609
Query: 490 WGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSK 549
WGSLL+A + H V+L E AA+ L+E++P+ + YV+L+ +Y+ K + + +
Sbjct: 610 WGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKS 669
Query: 550 KGIKKPSGYSWI 561
K IKK G SWI
Sbjct: 670 KRIKKDPGSSWI 681
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 148/344 (43%), Gaps = 71/344 (20%)
Query: 168 YAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM------------ 215
+A++G + +A +F M +R +V+W AMI YA+ M +A +FD M
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 216 --------------------GERNSFTWTTMVAGYASCGDMKAAKELY------------ 243
E+N+ ++ TM+ G+ G A+ LY
Sbjct: 120 TAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVA 179
Query: 244 ---------------------DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQD 282
M+ K+ V+ +M+ GY K+G + +AR LFD + ++
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRM-TERN 238
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQ-AKIKITEVAMVGAISACAQLRDIRMSNALT 341
TW AM+ Y + G+ ++G +F +RQ +K+ + AC R + +
Sbjct: 239 VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIH 298
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQ 401
+ + L + N+L++M+SK G + A F M+ +D +++++IT + +
Sbjct: 299 GLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQIS 358
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM 445
+A +LF +MP + + V++ ++ S G + + F +M
Sbjct: 359 EAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMM 398
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 145/309 (46%), Gaps = 17/309 (5%)
Query: 193 TAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGV 252
+ I +A+ + EA +F M R+ +W M++ YA G M A +++D M +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 253 TWVAMIAGYGKLG-NVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQ 311
++ AMI K ++ +A LF IP ++A ++A M+ + + G E ++ E
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIP-EKNAVSYATMITGFVRAGRFDEAEFLYAE--- 169
Query: 312 AKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDL 371
+K + ++ + LR + + A+ + +G + ++ +++++ + K G I
Sbjct: 170 TPVKFRD-SVASNVLLSGYLRAGKWNEAV--RVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 372 AWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG-LKPNQVTFIGVLNACS 430
A F M R++ T++AMI + + G +D LF RM +EG +K N T + AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 431 SSGLVEEGCRFFQIMTGV---FDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADA 487
EG + +++ + FD+ L + LG G+ + + ++K + D+
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDL-FLGNSLMSMYSKLGYMGEAKAVFGVMK----NKDS 341
Query: 488 TTWGSLLAA 496
+W SL+
Sbjct: 342 VSWNSLITG 350
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 136/348 (39%), Positives = 211/348 (60%), Gaps = 3/348 (0%)
Query: 219 NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIP 278
+ + T +V YA GD+ +A++++D M ++ V+ AMI Y K GNV AR LFD +
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM- 218
Query: 279 VPQDASTWAAMLACYAQNGYAKEGIEMFKEV-RQAKIKITEVAMVGAISACAQLRDIRMS 337
+D +W M+ YAQ+G+ + + +F+++ + K K E+ +V A+SAC+Q+ +
Sbjct: 219 CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 278
Query: 338 NALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEH 397
+ ++ + V LI+M+SKCG+++ A F+ +D+ ++AMI +A H
Sbjct: 279 RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMH 338
Query: 398 GKSQDAIDLFFRMPK-EGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPE 456
G SQDA+ LF M GL+P +TFIG L AC+ +GLV EG R F+ M + I+P E
Sbjct: 339 GYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIE 398
Query: 457 HYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEI 516
HY C+V LLGRAGQL+RAY IK AD+ W S+L +C++HG+ LG+ A +L+ +
Sbjct: 399 HYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGL 458
Query: 517 DPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
+ ++SG YVLL+N+YAS + G V+ LM +KGI K G S I+ E
Sbjct: 459 NIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIE 506
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 137/287 (47%), Gaps = 47/287 (16%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD F++T+ I S Y ++ S + P+ FTFSS+L +C + GK
Sbjct: 93 PDLFLFTAAINT-ASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKL 147
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
+H +++ G G + V T L+ +YAK G V A+ VFD M +R +V+ TAMI YAK
Sbjct: 148 IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGN 207
Query: 205 MVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVM-----SDKDGVTWVA--- 256
+ AR LFD+M ER+ +W M+ GYA G A L+ + D +T VA
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 257 --------------------------------MIAGYGKLGNVTEARRLFDGIPVPQDAS 284
+I Y K G++ EA +F+ P +D
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP-RKDIV 326
Query: 285 TWAAMLACYAQNGYAKEGIEMFKEVRQ-AKIKITEVAMVGAISACAQ 330
W AM+A YA +GY+++ + +F E++ ++ T++ +G + ACA
Sbjct: 327 AWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAH 373
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 124/288 (43%), Gaps = 21/288 (7%)
Query: 66 SEKSNICYAHKLFDTMPNCP-DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGF 124
+++ N+ A LFD+M C D W +I + H + + + P
Sbjct: 203 AKQGNVEAARALFDSM--CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
T + L+AC ++ A+ G+ +H + S N V T L+ MY+K G + +A VF+
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMG-----ERNSFTWTTMVAGYASCGDMKAA 239
+D+VAW AMI GYA +A LF+ M + T+ + A G +
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 240 KELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYA 294
+++ M + G+ + +++ G+ G + A + + D+ W+++L
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 295 QNGYAKEGIEMFKEVRQAKIKITEV--------AMVGAISACAQLRDI 334
+G G E+ + + IK + + A VG A++R++
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNL 488
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 260/489 (53%), Gaps = 16/489 (3%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
D F + +LI F+ + + + TY M +G+LP +TF S+L + + + K+V
Sbjct: 125 DVFGYNALISGFVVNGSPL-DAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKV 182
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD-VVAWTAMICGYAKVAM 204
HG + GF + V + L+ Y+K V DA+ VFD + DRD V W A++ GY+++
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 205 MVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVM----SDKDGVTWVA 256
+A +F M E + T T++++ + GD+ + ++ + S D V A
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKI 316
+I YGK + EA +F+ + +D TW ++L + G + +F+ + + I+
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRP 361
Query: 317 TEVAMVGAISACAQLRDIRMSNALTDH-IEEGCCDR---TLIVSNALINMHSKCGNIDLA 372
V + + C +L +R + + I G +R + N+L++M+ KCG++ A
Sbjct: 362 DIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDA 421
Query: 373 WREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS 432
F +MR +D +++ MI + + A+D+F M + G+KP+++TF+G+L ACS S
Sbjct: 422 RMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHS 481
Query: 433 GLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGS 492
G + EG F M V++I P +HYAC++D+LGRA +LE AY L + W S
Sbjct: 482 GFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRS 541
Query: 493 LLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGI 552
+L++CR+HGN +L A + L E++PE G YVL++N+Y K+ V+ M ++ +
Sbjct: 542 ILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNV 601
Query: 553 KKPSGYSWI 561
KK G SWI
Sbjct: 602 KKTPGCSWI 610
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 185/389 (47%), Gaps = 13/389 (3%)
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGF-GGNKIVQTALLGMYAKSGCVCDARDVFDGMDD 186
+ L C + V G+Q+HG +V+ GF + T+L+ MYAK G + A VF G +
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 187 RDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYAS--CGDMKAAK 240
RDV + A+I G+ ++A + M + +T+ +++ G + D+K
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVH 183
Query: 241 EL-YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYA 299
L + + D D ++ Y K +V +A+++FD +P D+ W A++ Y+Q
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 300 KEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNAL 359
++ + +F ++R+ + ++ + +SA DI ++ + ++VSNAL
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 360 INMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
I+M+ K ++ A F M RD++T+++++ G + LF RM G++P+
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 420 VTFIGVLNACSSSGLVEEGCRF--FQIMTGVFDIEPLPEH-YACIVDLLGRAGQLERAYS 476
VT VL C + +G + I++G+ + + E + ++D+ + G L A
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDA-R 422
Query: 477 LIKENATSADATTWGSLLAACRVHGNVEL 505
++ ++ D+ +W ++ V EL
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGEL 451
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 178/395 (45%), Gaps = 58/395 (14%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A K+FD +P+ D+ +W +L+ + S F + +++M + GV S T +SVL+A
Sbjct: 214 AQKVFDELPDRDDSVLWNALVNGY-SQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAF 272
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ G+ +HG V++G G + +V AL+ MY KS + +A +F+ MD+RD+ W
Sbjct: 273 TVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWN 332
Query: 194 AMICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVAGYASCGDMKAAKELYDVM--- 246
+++C + LF+ M G R + T TT++ ++ +E++ M
Sbjct: 333 SVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVS 392
Query: 247 ---SDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKE 301
+ K ++ +++ Y K G++ +AR +FD + V +D+++W M+ Y +
Sbjct: 393 GLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRV-KDSASWNIMINGYGVQSCGEL 451
Query: 302 GIEMFKEVRQAKIKITEVAMVGAISAC-------------AQLRDIRMSNALTDH----- 343
++MF + +A +K E+ VG + AC AQ+ + +DH
Sbjct: 452 ALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVI 511
Query: 344 ----------------IEEGCCDRTLIVSNALINMHSKC---GNIDLAW---REFSTMRC 381
I + CD ++ + L S C GN DLA + +
Sbjct: 512 DMLGRADKLEEAYELAISKPICDNPVVWRSIL----SSCRLHGNKDLALVAGKRLHELEP 567
Query: 382 RDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
Y M + E GK ++ +D+ M ++ +K
Sbjct: 568 EHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVK 602
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 109/255 (42%), Gaps = 43/255 (16%)
Query: 322 VGAISACAQLRDIRMSNALTDH-IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMR 380
+ + CAQ +D + + +G D + +L+NM++KCG + A F
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE 123
Query: 381 CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSS--------- 431
RD++ Y+A+I+ F +G DA++ + M G+ P++ TF +L +
Sbjct: 124 -RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKV 182
Query: 432 ----------------SGLVEEGCRFFQIMTGVFDIEPLPEH-----YACIVDLLGRAGQ 470
SGLV +F + + LP+ + +V+ + +
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 471 LERA---YSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLL 527
E A +S ++E T S+L+A V G+++ G + H L + SG+ +++
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSI--HGLAV-KTGSGSDIVV 299
Query: 528 AN----MYASQDKWV 538
+N MY + KW+
Sbjct: 300 SNALIDMYG-KSKWL 313
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/533 (29%), Positives = 266/533 (49%), Gaps = 72/533 (13%)
Query: 52 HFLSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRA-HFRHCIST 110
HFL LLR N+ YA +FD + P+ ++ +++ A+ S H S
Sbjct: 56 HFLCFKLLRFCTL--RLCNLSYARFIFDRF-SFPNTHLYAAVLTAYSSSLPLHASSAFSF 112
Query: 111 YARM-HQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYA 169
+ M ++S P+ F + VL + + + VH L +SGF +Y
Sbjct: 113 FRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFH-----------LY- 160
Query: 170 KSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAG 229
VV TA++ YA
Sbjct: 161 -------------------VVVQTALLHSYA----------------------------- 172
Query: 230 YASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
+S + A++L+D MS+++ V+W AM++GY + G+++ A LF+ +P +D +W A+
Sbjct: 173 -SSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP-ERDVPSWNAI 230
Query: 290 LACYAQNGYAKEGIEMFKE-VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC 348
LA QNG E + +F+ + + I+ EV +V +SACAQ ++++ +
Sbjct: 231 LAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD 290
Query: 349 CDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFF 408
+ VSN+L++++ KCGN++ A F + + +++MI FA HG+S++AI +F
Sbjct: 291 LSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFE 350
Query: 409 RMPK---EGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLL 465
M K +KP+ +TFIG+LNAC+ GLV +G +F +MT F IEP EHY C++DLL
Sbjct: 351 EMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLL 410
Query: 466 GRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYV 525
GRAG+ + A ++ AD WGSLL AC++HG+++L E A ++L+ ++P + G
Sbjct: 411 GRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVA 470
Query: 526 LLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREISRQQTADSIKKKH 578
++AN+Y W A +K++ + KP G+S I+ + Q S+ K H
Sbjct: 471 MMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFY-SLDKSH 522
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 207/341 (60%), Gaps = 1/341 (0%)
Query: 222 TWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQ 281
T ++ Y D+ A +++D M ++D ++W ++++GY +LG + +A+ LF + + +
Sbjct: 146 TENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH-LMLDK 204
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
+W AM++ Y G E ++ F+E++ A I+ E++++ + +CAQL + + +
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQ 401
+ E + V NALI M+SKCG I A + F M +D+ ++S MI+ +A HG +
Sbjct: 265 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 324
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI 461
AI+ F M + +KPN +TF+G+L+ACS G+ +EG R+F +M + IEP EHY C+
Sbjct: 325 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 384
Query: 462 VDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDS 521
+D+L RAG+LERA + K D+ WGSLL++CR GN+++ A HL+E++PED
Sbjct: 385 IDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDM 444
Query: 522 GTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
G YVLLAN+YA KW ++K++ + +KK G S I+
Sbjct: 445 GNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 195/424 (45%), Gaps = 86/424 (20%)
Query: 55 SPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM 114
S ++ ++++F + ++ YA +LF+ + N P+ F++ S+IRA+ +H + + I Y ++
Sbjct: 42 SFMVTKMVDFCDKIEDMDYATRLFNQVSN-PNVFLYNSIIRAY-THNSLYCDVIRIYKQL 99
Query: 115 -HQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
+S LP FTF + +C + + GKQVHG L + G + + + AL+ MY K
Sbjct: 100 LRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 174 VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASC 233
+ DA VFD M +RDV++W +++ GYA++ M +A+ LF M ++ +WT M++GY
Sbjct: 160 LVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI 219
Query: 234 GDMKAAKELYDVMS----DKDGVT------------------WV---------------- 255
G A + + M + D ++ W+
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVC 279
Query: 256 -AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
A+I Y K G +++A +LF G +D +W+ M++ YA +G A IE F E+++AK+
Sbjct: 280 NALIEMYSKCGVISQAIQLF-GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKV 338
Query: 315 KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWR 374
K + +G +SAC S G R
Sbjct: 339 KPNGITFLGLLSAC-----------------------------------SHVGMWQEGLR 363
Query: 375 EFSTMRCR-----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNAC 429
F MR + Y +I A GK + A+++ MP +KP+ + +L++C
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP---MKPDSKIWGSLLSSC 420
Query: 430 SSSG 433
+ G
Sbjct: 421 RTPG 424
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/447 (31%), Positives = 245/447 (54%), Gaps = 10/447 (2%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD 185
++++L C +++G+ VH ++QS F + ++ LL MYAK G + +AR VF+ M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 186 DRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKE 241
RD V WT +I GY++ +A F+ M N FT ++++ A+ +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 242 LYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
L+ D + A++ Y + G + +A+ +FD + D S W A++A +A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAGHARRS 241
Query: 298 YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSN 357
++ +E+F+ + + + + + AC+ + + ++ + N
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 358 ALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKP 417
L++M++K G+I A + F + RD+ ++++++TA+A+HG ++A+ F M + G++P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 418 NQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL 477
N+++F+ VL ACS SGL++EG ++++M I P HY +VDLLGRAG L RA
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 478 IKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKW 537
I+E A W +LL ACR+H N ELG AA H+ E+DP+D G +V+L N+YAS +W
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 480
Query: 538 VGAEVVKKLMSKKGIKKPSGYSWIQRE 564
A V+K M + G+KK SW++ E
Sbjct: 481 NDAARVRKKMKESGVKKEPACSWVEIE 507
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 204/450 (45%), Gaps = 67/450 (14%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHC--ISTYARMHQSG 118
+LN ++ ++ A K+F+ MP D WT+LI + H R C + + +M + G
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQ-RDFVTWTTLISGYSQHD---RPCDALLFFNQMLRFG 156
Query: 119 VLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDAR 178
P+ FT SSV+ A G Q+HG V+ GF N V +ALL +Y + G + DA+
Sbjct: 157 YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQ 216
Query: 179 DVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM---GERNS-FTWTTMVAGYASCG 234
VFD ++ R+ V+W A+I G+A+ + +A LF M G R S F++ ++ +S G
Sbjct: 217 LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG 276
Query: 235 DMKAAKELYDVMSDKDGVTWVA-----MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
++ K ++ M K G VA ++ Y K G++ +AR++FD + +D +W ++
Sbjct: 277 FLEQGKWVHAYMI-KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSL 334
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
L YAQ+G+ KE + F+E+R+ I+ E++ + ++AC
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC--------------------- 373
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMR----CRDMYTYSAMITAFAEHGKSQDAID 405
S G +D W + M+ + + Y ++ G A+
Sbjct: 374 --------------SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEP-LPEHYACIVDL 464
MP ++P + +LNAC E G VF+++P P + + ++
Sbjct: 420 FIEEMP---IEPTAAIWKALLNACRMHKNTELGA---YAAEHVFELDPDDPGPHVILYNI 473
Query: 465 L---GRAGQLERAYSLIKENATSAD-ATTW 490
GR R +KE+ + A +W
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSW 503
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 264/498 (53%), Gaps = 12/498 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A+ +F MP D W SL+ +F++ + M SG + TF+S L AC
Sbjct: 315 ANLVFKQMPT-KDLISWNSLMASFVNDGRSL-DALGLLCSMISSGKSVNYVTFTSALAAC 372
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+G+ +HG +V SG N+I+ AL+ MY K G + ++R V M RDVVAW
Sbjct: 373 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 432
Query: 194 AMICGYAKVAMMVEARWLFDNMG-ERNSFTWTTMVAGYASC---GDM-KAAKELYDVMS- 247
A+I GYA+ +A F M E S + T+V+ ++C GD+ + K L+ +
Sbjct: 433 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 492
Query: 248 ---DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
+ D ++I Y K G+++ ++ LF+G+ ++ TW AMLA A +G+ +E ++
Sbjct: 493 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLK 551
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+ ++R + + + + +SA A+L + L + + + NA +M+S
Sbjct: 552 LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYS 611
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
KCG I + R + +++ +I+A HG ++ F M + G+KP VTF+
Sbjct: 612 KCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVS 671
Query: 425 VLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
+L ACS GLV++G ++ ++ F +EP EH C++DLLGR+G+L A + I +
Sbjct: 672 LLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 731
Query: 485 ADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVK 544
+ W SLLA+C++HGN++ G AA +L +++PED YVL +NM+A+ +W E V+
Sbjct: 732 PNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVR 791
Query: 545 KLMSKKGIKKPSGYSWIQ 562
K M K IKK SW++
Sbjct: 792 KQMGFKNIKKKQACSWVK 809
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 204/434 (47%), Gaps = 18/434 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A LFD MP + W +++ + + + + +M G+ PS F +S++ AC
Sbjct: 11 ARHLFDIMP-VRNEVSWNTMMSGIV-RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTAC 68
Query: 134 GRVPAMV-EGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
GR +M EG QVHG + +SG + V TA+L +Y G V +R VF+ M DR+VV+W
Sbjct: 69 GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSW 128
Query: 193 TAMICGYAKVAMMVEARWLFDNM-GERNSFTWTTMVAGYASCGDMKAAKELYDVMSD--K 249
T+++ GY+ E ++ M GE +M +SCG +K ++ K
Sbjct: 129 TSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVK 188
Query: 250 DGV-----TWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
G+ ++I+ G +GNV A +FD + +D +W ++ A YAQNG+ +E
Sbjct: 189 SGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFR 247
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+F +R+ ++ + +S + + + + + D + V N L+ M++
Sbjct: 248 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 307
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
G A F M +D+ ++++++ +F G+S DA+ L M G N VTF
Sbjct: 308 GAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTS 367
Query: 425 VLNACSSSGLVEEG--CRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
L AC + E+G +++G+F + + +V + G+ G++ + ++ +
Sbjct: 368 ALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN---ALVSMYGKIGEMSESRRVLLQ-M 423
Query: 483 TSADATTWGSLLAA 496
D W +L+
Sbjct: 424 PRRDVVAWNALIGG 437
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 162/344 (47%), Gaps = 22/344 (6%)
Query: 167 MYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGE----RNSFT 222
MY K G V AR +FD M R+ V+W M+ G +V + +E F M + +SF
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 223 WTTMVAGYASCGDM-KAAKELYDVMSD----KDGVTWVAMIAGYGKLGNVTEARRLFDGI 277
++V G M + +++ ++ D A++ YG G V+ +R++F+ +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 278 PVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMS 337
P ++ +W +++ Y+ G +E I+++K +R + E +M IS+C L+D +
Sbjct: 121 P-DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 338 NALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEH 397
+ + + + L V N+LI+M GN+D A F M RD +++++ A+A++
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 398 GKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV-FDIEPLPE 456
G +++ +F M + + N T +L+ + G ++ + FD
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD------ 293
Query: 457 HYACIVDLLGR----AGQLERAYSLIKENATSADATTWGSLLAA 496
C+ + L R AG+ A + K+ T D +W SL+A+
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 264/498 (53%), Gaps = 12/498 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A+ +F MP D W SL+ +F++ + M SG + TF+S L AC
Sbjct: 298 ANLVFKQMPT-KDLISWNSLMASFVNDGRSL-DALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+G+ +HG +V SG N+I+ AL+ MY K G + ++R V M RDVVAW
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 415
Query: 194 AMICGYAKVAMMVEARWLFDNMG-ERNSFTWTTMVAGYASC---GDM-KAAKELYDVMS- 247
A+I GYA+ +A F M E S + T+V+ ++C GD+ + K L+ +
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Query: 248 ---DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
+ D ++I Y K G+++ ++ LF+G+ ++ TW AMLA A +G+ +E ++
Sbjct: 476 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLK 534
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+ ++R + + + + +SA A+L + L + + + NA +M+S
Sbjct: 535 LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYS 594
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
KCG I + R + +++ +I+A HG ++ F M + G+KP VTF+
Sbjct: 595 KCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVS 654
Query: 425 VLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
+L ACS GLV++G ++ ++ F +EP EH C++DLLGR+G+L A + I +
Sbjct: 655 LLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 714
Query: 485 ADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVK 544
+ W SLLA+C++HGN++ G AA +L +++PED YVL +NM+A+ +W E V+
Sbjct: 715 PNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVR 774
Query: 545 KLMSKKGIKKPSGYSWIQ 562
K M K IKK SW++
Sbjct: 775 KQMGFKNIKKKQACSWVK 792
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 190/397 (47%), Gaps = 16/397 (4%)
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMV-EGKQVHGRLVQSGFGGNKIVQTALLGMYA 169
+ +M G+ PS F +S++ ACGR +M EG QVHG + +SG + V TA+L +Y
Sbjct: 29 FRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYG 88
Query: 170 KSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM-GERNSFTWTTMVA 228
G V +R VF+ M DR+VV+WT+++ GY+ E ++ M GE +M
Sbjct: 89 VYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL 148
Query: 229 GYASCGDMKAAKELYDVMSD--KDGV-----TWVAMIAGYGKLGNVTEARRLFDGIPVPQ 281
+SCG +K ++ K G+ ++I+ G +GNV A +FD + +
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ER 207
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
D +W ++ A YAQNG+ +E +F +R+ ++ + +S + + +
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 267
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQ 401
+ + D + V N L+ M++ G A F M +D+ ++++++ +F G+S
Sbjct: 268 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSL 327
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG--CRFFQIMTGVFDIEPLPEHYA 459
DA+ L M G N VTF L AC + E+G +++G+F + +
Sbjct: 328 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN--- 384
Query: 460 CIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAA 496
+V + G+ G++ + ++ + D W +L+
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQ-MPRRDVVAWNALIGG 420
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 203/442 (45%), Gaps = 18/442 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
+ K+F+ MP+ + WTSL+ + S + I Y M GV + + S V+++C
Sbjct: 96 SRKVFEEMPD-RNVVSWTSLMVGY-SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 153
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
G + G+Q+ G++V+SG V+ +L+ M G V A +FD M +RD ++W
Sbjct: 154 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 213
Query: 194 AMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
++ YA+ + E+ +F M E NS T +T+++ K + ++ ++
Sbjct: 214 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 273
Query: 250 --DGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
D V V ++ Y G EA +F +P +D +W +++A + +G + + + +
Sbjct: 274 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMASFVNDGRSLDALGL 332
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
+ + + V A++AC L + I+ NAL++M+ K
Sbjct: 333 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 392
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
G + + R M RD+ ++A+I +AE A+ F M EG+ N +T + V
Sbjct: 393 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 452
Query: 426 LNACSSSG-LVEEGCRFFQ-IMTGVFDIEPLPEHYA-CIVDLLGRAGQLERAYSLIKENA 482
L+AC G L+E G I++ F+ + EH ++ + + G L + L
Sbjct: 453 LSACLLPGDLLERGKPLHAYIVSAGFESD---EHVKNSLITMYAKCGDLSSSQDLFN-GL 508
Query: 483 TSADATTWGSLLAACRVHGNVE 504
+ + TW ++LAA HG+ E
Sbjct: 509 DNRNIITWNAMLAANAHHGHGE 530
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 116/231 (50%), Gaps = 8/231 (3%)
Query: 277 IPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDI-R 335
+PV + S W M++ + G EG+E F+++ IK + + ++AC + + R
Sbjct: 1 MPVRNEVS-WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFR 59
Query: 336 MSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFA 395
+ + + + VS A+++++ G + + + F M R++ ++++++ ++
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 396 EHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFD--IEP 453
+ G+ ++ ID++ M EG+ N+ + V+++C GL+++ QI+ V +E
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLES 176
Query: 454 LPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVE 504
++ +LG G ++ A + I + + D +W S+ AA +G++E
Sbjct: 177 KLAVENSLISMLGSMGNVDYA-NYIFDQMSERDTISWNSIAAAYAQNGHIE 226
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 244/478 (51%), Gaps = 61/478 (12%)
Query: 144 QVHGRLVQSGFGGNKIVQTALLGMYAKSGC----VCDARDVFDGMDDRDVVAWTAMICGY 199
Q+H ++SG + + +L A S + A +F+ M R+ +W +I G+
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 200 AK-------VAMMVEARWLFDNMGERNSFTW----------------------------- 223
++ +A+ + + D E N FT+
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 224 ------TTMVAGYASCGDMKAAKELY---------DVMSDK---DG--VTWVAMIAGYGK 263
+ +V Y CG MK A+ L+ VM+D+ DG V W MI GY +
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 264 LGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVG 323
LG+ AR LFD + + +W M++ Y+ NG+ K+ +E+F+E+++ I+ V +V
Sbjct: 221 LGDCKAARMLFDKMR-QRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 324 AISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRD 383
+ A ++L + + L + E+ ++ +ALI+M+SKCG I+ A F + +
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 384 MYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQ 443
+ T+SAMI FA HG++ DAID F +M + G++P+ V +I +L ACS GLVEEG R+F
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 444 IMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNV 503
M V +EP EHY C+VDLLGR+G L+ A I D W +LL ACR+ GNV
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Query: 504 ELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
E+G+ A L+++ P DSG YV L+NMYASQ W ++ M +K I+K G S I
Sbjct: 460 EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 190/436 (43%), Gaps = 106/436 (24%)
Query: 73 YAHKLFDTMP--NCPDAFIWTSLIRAFLSHRAHFRHCIST---YARMHQSGVLPSGFTFS 127
YAHK+F+ MP NC F W ++IR F S + I+ Y M V P+ FTF
Sbjct: 77 YAHKIFNQMPQRNC---FSWNTIIRGF-SESDEDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDG---- 183
SVL AC + + EGKQ+HG ++ GFGG++ V + L+ MY G + DAR +F
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 184 -----MDDR-----DVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASC 233
M DR ++V W MI GY ++ AR LFD M +R+ +W TM++GY+
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 234 GDMKAAKELYDVMSDKD----GVTWV---------------------------------- 255
G K A E++ M D VT V
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 256 -AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
A+I Y K G + +A +F+ +P ++ TW+AM+ +A +G A + I+ F ++RQA +
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 315 KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWR 374
+ ++VA + ++AC S G ++ R
Sbjct: 372 RPSDVAYINLLTAC-----------------------------------SHGGLVEEGRR 396
Query: 375 EFSTMRCRD-----MYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNAC 429
FS M D + Y M+ G +A + MP +KP+ V + +L AC
Sbjct: 397 YFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP---IKPDDVIWKALLGAC 453
Query: 430 SSSGLVEEGCRFFQIM 445
G VE G R I+
Sbjct: 454 RMQGNVEMGKRVANIL 469
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 273/528 (51%), Gaps = 47/528 (8%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVL 130
I A LF+TM + WTS++ + + F+ I + + + G + +TF SVL
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFK-AIECFRDLRREGNQSNQYTFPSVL 234
Query: 131 NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
AC V A G QVH +V+SGF N VQ+AL+ MYAK + AR + +GM+ DVV
Sbjct: 235 TACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVV 294
Query: 191 AWTAMICGYAKVAMMVEARWLFDNMGERN----SFTWTTMVAGYA-SCGDMKAAKELYDV 245
+W +MI G + ++ EA +F M ER+ FT +++ +A S +MK A + +
Sbjct: 295 SWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCL 354
Query: 246 MSDKDGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKE 301
+ T+ A++ Y K G + A ++F+G+ + +D +W A++ NG E
Sbjct: 355 IVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDE 413
Query: 302 GIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALIN 361
+++F +R I ++ +SA A+L + + + + +L V+N+L+
Sbjct: 414 ALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVT 473
Query: 362 MHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVT 421
M++KCG+++ A F++M RD+ T++ +I +A++
Sbjct: 474 MYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN------------------------ 509
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKEN 481
GL+E+ R+F M V+ I P PEHYAC++DL GR+G + L+ +
Sbjct: 510 -----------GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM 558
Query: 482 ATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAE 541
DAT W ++LAA R HGN+E GE AA+ L+E++P ++ YV L+NMY++ + A
Sbjct: 559 EVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAA 618
Query: 542 VVKKLMSKKGIKKPSGYSWIQREISRQQTADSIKKKHFNLLADFSQSD 589
V++LM + I K G SW++ E + + S ++H ++ +S+ D
Sbjct: 619 NVRRLMKSRNISKEPGCSWVE-EKGKVHSFMSEDRRHPRMVEIYSKVD 665
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 224/484 (46%), Gaps = 54/484 (11%)
Query: 66 SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHR------AHFRH-----------CI 108
S+ + A ++FD MP D F W ++I A+ + R FR I
Sbjct: 39 SKSGRVDEARQMFDKMPE-RDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALI 97
Query: 109 STYAR-------------MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFG 155
S Y + M G+ P+ +T SVL C + ++ G+Q+HG +++GF
Sbjct: 98 SGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFD 157
Query: 156 GNKIVQTALLGMYAKSGCVCDARDVFDGMD-DRDVVAWTAMICGYAKVAMMVEARWLFDN 214
+ V LL MYA+ + +A +F+ M+ +++ V WT+M+ GY++ +A F +
Sbjct: 158 LDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD 217
Query: 215 M----GERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWV----AMIAGYGKLGN 266
+ + N +T+ +++ AS + +++ + T + A+I Y K
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCRE 277
Query: 267 VTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAIS 326
+ AR L +G+ V D +W +M+ + G E + MF + + +KI + + +I
Sbjct: 278 MESARALLEGMEV-DDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT-IPSIL 335
Query: 327 ACAQLRDIRMSNALTDH---IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRD 383
C L M A + H ++ G L V+NAL++M++K G +D A + F M +D
Sbjct: 336 NCFALSRTEMKIASSAHCLIVKTGYATYKL-VNNALVDMYAKRGIMDSALKVFEGMIEKD 394
Query: 384 MYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQ 443
+ +++A++T +G +A+ LF M G+ P+++ VL+A + L+E F Q
Sbjct: 395 VISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLE----FGQ 450
Query: 444 IMTGVFDIEPLPEHYAC---IVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVH 500
+ G + P + +V + + G LE A ++I + D TW L+ +
Sbjct: 451 QVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA-NVIFNSMEIRDLITWTCLIVGYAKN 509
Query: 501 GNVE 504
G +E
Sbjct: 510 GLLE 513
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 171/400 (42%), Gaps = 46/400 (11%)
Query: 147 GRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMV 206
G + S K+ LLG +KSG V +AR +FD M +RD W MI Y+ +
Sbjct: 17 GSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLS 76
Query: 207 EARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS------------------- 247
+A LF + +N+ +W +++GY G A L+ M
Sbjct: 77 DAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCT 136
Query: 248 --------------------DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWA 287
D D ++A Y + ++EA LF+ + ++ TW
Sbjct: 137 SLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWT 196
Query: 288 AMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEG 347
+ML Y+QNG+A + IE F+++R+ + + ++ACA + R+ + I +
Sbjct: 197 SMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 348 CCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLF 407
+ V +ALI+M++KC ++ A M D+ ++++MI G +A+ +F
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMF 316
Query: 408 FRMPKEGLKPNQVTFIGVLN--ACSSSGL-VEEGCRFFQIMTGVFDIEPLPEHYACIVDL 464
RM + +K + T +LN A S + + + + TG + + +VD+
Sbjct: 317 GRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN---ALVDM 373
Query: 465 LGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVE 504
+ G ++ A + E D +W +L+ +G+ +
Sbjct: 374 YAKRGIMDSALKVF-EGMIEKDVISWTALVTGNTHNGSYD 412
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 151/473 (31%), Positives = 252/473 (53%), Gaps = 9/473 (1%)
Query: 105 RHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTAL 164
R I Y +G P FTF V ACG+ + EGKQ+HG + + GF + VQ +L
Sbjct: 88 RVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSL 147
Query: 165 LGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG-ERNSFTW 223
+ Y G +A VF M RDVV+WT +I G+ + + EA F M E N T+
Sbjct: 148 VHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATY 207
Query: 224 TTMVAGYASCGDMKAAKELYDVMSDKDGV----TWVAMIAGYGKLGNVTEARRLFDGIPV 279
++ G + K ++ ++ + + T A+I Y K +++A R+F +
Sbjct: 208 VCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELE- 266
Query: 280 PQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAK-IKITEVAMVGAISACAQLRDIRMSN 338
+D +W +M++ +KE I++F ++ + IK + +SACA L +
Sbjct: 267 KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGR 326
Query: 339 ALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHG 398
+ ++I + A+++M++KCG I+ A F+ +R ++++T++A++ A HG
Sbjct: 327 WVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHG 386
Query: 399 KSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM-TGVFDIEPLPEH 457
+++ F M K G KPN VTF+ LNAC +GLV+EG R+F M + +++ P EH
Sbjct: 387 HGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEH 446
Query: 458 YACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNV-ELGETAARHLLEI 516
Y C++DLL RAG L+ A L+K D G++L+AC+ G + EL + L+I
Sbjct: 447 YGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDI 506
Query: 517 DPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREISRQQ 569
+ EDSG YVLL+N++A+ +W +++LM KGI K G S+I++ ++ Q
Sbjct: 507 EFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIEKFMTLDQ 559
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/484 (32%), Positives = 244/484 (50%), Gaps = 12/484 (2%)
Query: 89 IWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGR 148
IW +++ A+ + + + + M Q VLP FT S+V++ C + GK VH
Sbjct: 340 IWNAMVAAYAENDYGYS-ALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 149 LVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEA 208
L + +++ALL +Y+K GC DA VF M+++D+VAW ++I G K EA
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 209 RWLFDNMGERN------SFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWV----AMI 258
+F +M + + S T++ A ++ +++ M V V ++I
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 259 AGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITE 318
Y K G A ++F + ++ W +M++CY++N + I++F + I
Sbjct: 519 DLYSKCGLPEMALKVFTSMST-ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDS 577
Query: 319 VAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFST 378
V++ + A + + +L + + NALI+M+ KCG A F
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 637
Query: 379 MRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
M+ + + T++ MI + HG A+ LF M K G P+ VTF+ +++AC+ SG VEEG
Sbjct: 638 MQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEG 697
Query: 439 CRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACR 498
F+ M + IEP EHYA +VDLLGRAG LE AYS IK AD++ W LL+A R
Sbjct: 698 KNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASR 757
Query: 499 VHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGY 558
H NVELG +A LL ++PE TYV L N+Y A + LM +KG+ K G
Sbjct: 758 THHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGC 817
Query: 559 SWIQ 562
SWI+
Sbjct: 818 SWIE 821
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 193/423 (45%), Gaps = 25/423 (5%)
Query: 94 IRAFLSHRAHFRHCISTYARMHQSGVL-PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQS 152
IRA + + + + Y++ S S FTF S+L AC + + GK +HG +V
Sbjct: 31 IRALI-QKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVL 89
Query: 153 GFGGNKIVQTALLGMYAKSGCVCDARDVFD-------GMDDRDVVAWTAMICGYAKVAMM 205
G+ + + T+L+ MY K G + A VFD G+ RDV W +MI GY K
Sbjct: 90 GWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRF 149
Query: 206 VEARWLFDNM---GER-NSFTWTTMVAGYASCGDMK--AAKELYDVM----SDKDGVTWV 255
E F M G R ++F+ + +V+ G+ + K+++ M D D
Sbjct: 150 KEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKT 209
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
A+I Y K G +A R+F I + W M+ + +G + ++++ + +K
Sbjct: 210 ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVK 269
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWRE 375
+ + GA+ AC+Q + + + + V +L++M+SKCG + A
Sbjct: 270 LVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV 329
Query: 376 FSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLV 435
FS + + + ++AM+ A+AE+ A+DLF M ++ + P+ T V++ CS GL
Sbjct: 330 FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLY 389
Query: 436 EEGCRFFQIMTGVFD--IEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSL 493
G + +F I+ + ++ L + G AY L+ ++ D WGSL
Sbjct: 390 NYGK---SVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY-LVFKSMEEKDMVAWGSL 445
Query: 494 LAA 496
++
Sbjct: 446 ISG 448
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 218/495 (44%), Gaps = 55/495 (11%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++F + + + +W +I F + Y + V +F+ L AC
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGF-GGSGICESSLDLYMLAKNNSVKLVSTSFTGALGAC 282
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ G+Q+H +V+ G + V T+LL MY+K G V +A VF + D+ + W
Sbjct: 283 SQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAK----ELYDV 245
AM+ YA+ A LF M ++ +SFT + +++ + G K EL+
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 246 MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
A++ Y K G +A +F + +D W ++++ +NG KE +++
Sbjct: 403 PIQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 306 FKEVR--QAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMH 363
F +++ +K M +ACA L +R + + + + V ++LI+++
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLY 521
Query: 364 SKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFI 423
SKCG ++A + F++M +M +++MI+ ++ + + +IDLF M +G+ P+ V+
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 424 GVLNACSSSGLVEEG----------------------------CRFFQIMTGVFDIEPLP 455
VL A SS+ + +G C F + +F
Sbjct: 582 SVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIF---KKM 638
Query: 456 EHYACIV-DLL----GRAGQLERAYSL---IKENATSADATTWGSLLAACRVHGNVELGE 507
+H + I +L+ G G A SL +K+ S D T+ SL++AC G VE G
Sbjct: 639 QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEG- 697
Query: 508 TAARHLLEIDPEDSG 522
+++ E +D G
Sbjct: 698 ---KNIFEFMKQDYG 709
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 274/543 (50%), Gaps = 44/543 (8%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM-HQSGV 119
+++F +E + A K+FD M + WTS+I + + R + + + RM V
Sbjct: 175 LVHFYAECGELDSARKVFDEMSE-RNVVSWTSMICGY-ARRDFAKDAVDLFFRMVRDEEV 232
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
P+ T V++AC ++ + G++V+ + SG N ++ +AL+ MY K + A+
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGE---------------------- 217
+FD ++ AM Y + + EA +F+ M +
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 218 ------------RNSF-TW----TTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAG 260
RN F +W ++ Y C A ++D MS+K VTW +++AG
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 261 YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVR-QAKIKITEV 319
Y + G V A F+ +P ++ +W +++ Q +E IE+F ++ Q + V
Sbjct: 413 YVENGEVDAAWETFETMP-EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV 471
Query: 320 AMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM 379
M+ SAC L + ++ + +IE+ + + L++M S+CG+ + A F+++
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 380 RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGC 439
RD+ ++A I A A G ++ AI+LF M ++GLKP+ V F+G L ACS GLV++G
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 440 RFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRV 499
F M + + P HY C+VDLLGRAG LE A LI++ + W SLLAACRV
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 500 HGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYS 559
GNVE+ AA + + PE +G+YVLL+N+YAS +W V+ M +KG++KP G S
Sbjct: 652 QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Query: 560 WIQ 562
IQ
Sbjct: 712 SIQ 714
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 215/445 (48%), Gaps = 21/445 (4%)
Query: 68 KSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFS 127
+ ++ +A ++F+ + F++ SLIR + S I + RM SG+ P +TF
Sbjct: 80 RESLSFAKEVFENSESYGTCFMYNSLIRGYASS-GLCNEAILLFLRMMNSGISPDKYTFP 138
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
L+AC + A G Q+HG +V+ G+ + VQ +L+ YA+ G + AR VFD M +R
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 188 DVVAWTAMICGYAKVAMMVEARWLF-----DNMGERNSFTWTTMVAGYASCGDMKAAKEL 242
+VV+WT+MICGYA+ +A LF D NS T +++ A D++ +++
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 243 YDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGY 298
Y + + + + A++ Y K + A+RLFD + AM + Y + G
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQGL 317
Query: 299 AKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNA 358
+E + +F + + ++ ++M+ AIS+C+QLR+I + ++ + + NA
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 359 LINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
LI+M+ KC D A+R F M + + T+++++ + E+G+ A + F MP++ N
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK----N 433
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERA---Y 475
V++ +++ L EE F M + I G G L+ A Y
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 476 SLIKENATSAD---ATTWGSLLAAC 497
I++N D TT + + C
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRC 518
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 9/243 (3%)
Query: 248 DKDGVTWVAMIAGYGKLG---NVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
D D T ++A +LG +++ A+ +F+ + +++ YA +G E I
Sbjct: 61 DNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL 120
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH--IEEGCCDRTLIVSNALINM 362
+F + + I + +SACA+ R N + H I + + L V N+L++
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAKSR--AKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPK-EGLKPNQVT 421
+++CG +D A + F M R++ ++++MI +A ++DA+DLFFRM + E + PN VT
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKEN 481
+ V++AC+ +E G + + + IE + +VD+ + ++ A L E
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 482 ATS 484
S
Sbjct: 298 GAS 300
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 270/544 (49%), Gaps = 39/544 (7%)
Query: 66 SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFT 125
++ S I A +LFD +P PD + +LI + R F + + RM + G GFT
Sbjct: 85 AKDSKIHIARQLFDEIPQ-PDTVSYNTLISGYADARETFAAMV-LFKRMRKLGFEVDGFT 142
Query: 126 FSSVLNAC-GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
S ++ AC RV + KQ+H V GF V A + Y+K G + +A VF GM
Sbjct: 143 LSGLIAACCDRVDLI---KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 185 DD-RDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAA 239
D+ RD V+W +MI Y + +A L+ M + + FT +++ S +
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 240 KELYDVMSD----KDGVTWVAMIAGYGKLGN---VTEARRLFDGIPVPQDASTWAAMLAC 292
++ + + ++ +I Y K G + ++ ++F I P D W M++
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP-DLVVWNTMISG 318
Query: 293 YAQNG-YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSN-----ALTDHIEE 346
Y+ N ++E ++ F+++++ + + + V SAC+ L A+ HI
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 347 GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDL 406
+ V+NALI+++ K GN+ A F M + +++ MI +A+HG +A+ L
Sbjct: 379 N----RISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 407 FFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLG 466
+ RM G+ PN++TF+ VL+AC+ G V+EG +F M F IEP EHY+C++DLLG
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 467 RAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVL 526
RAG+LE A I + W +LL ACR H N+ L E AA L+ + P + YV+
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVM 554
Query: 527 LANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREISRQQTADSIKKKHFNLLADFS 586
LANMYA KW V+K M K I+K G SWI+ + KKKH + D+S
Sbjct: 555 LANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVK----------KKKHVFVAEDWS 604
Query: 587 QSDI 590
I
Sbjct: 605 HPMI 608
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 150/334 (44%), Gaps = 41/334 (12%)
Query: 139 MVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICG 198
+ GK +H V+S + + + +Y+K G + AR F ++ +V ++ ++
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 199 YAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTW 254
YAK + + AR LFD + + ++ ++ T+++GYA + AA L+ M + DG T
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 255 VAMIAG---------------------------------YGKLGNVTEARRLFDGIPVPQ 281
+IA Y K G + EA +F G+ +
Sbjct: 144 SGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
D +W +M+ Y Q+ + + ++KE+ KI + ++A L +
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCGNIDLAW---REFSTMRCRDMYTYSAMITAFAEHG 398
+ + + V + LI+ +SKCG D + + F + D+ ++ MI+ ++ +
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 399 K-SQDAIDLFFRMPKEGLKPNQVTFIGVLNACSS 431
+ S++A+ F +M + G +P+ +F+ V +ACS+
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 281/528 (53%), Gaps = 19/528 (3%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM-HQSGVLPSGFTFSSVLNA 132
A ++FD + PD W+S++ F + + ++ + + RM S V P T ++++A
Sbjct: 115 ALRMFDELEK-PDIVTWSSMVSGFEKNGSPYQ-AVEFFRRMVMASDVTPDRVTLITLVSA 172
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
C ++ G+ VHG +++ GF + + +LL YAKS +A ++F + ++DV++W
Sbjct: 173 CTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISW 232
Query: 193 TAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYDVMSD 248
+ +I Y + EA +F++M E N T ++ A+ D++ ++ +++
Sbjct: 233 STVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR 292
Query: 249 KDGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
K T V A++ Y K + EA +F IP +D +W A+++ + NG A IE
Sbjct: 293 KGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIE 351
Query: 305 MFK-EVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMH 363
F + + + + MV + +C++L + + ++ + D + +L+ ++
Sbjct: 352 EFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELY 411
Query: 364 SKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG-LKPNQVTF 422
S+CG++ A + F+ + +D ++++IT + HGK A++ F M K +KPN+VTF
Sbjct: 412 SRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTF 471
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
+ +L+ACS +GL+ EG R F++M + + P EHYA +VDLLGR G L+ A + K
Sbjct: 472 LSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP 531
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEV 542
S G+LL ACR+H N E+ ET A+ L E++ +G Y+L++N+Y + +W E
Sbjct: 532 FSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEK 591
Query: 543 VKKLMSKKGIKKPSGYSWIQ--REISRQQTADSI---KKKHFNLLADF 585
++ + ++GIKK S I+ R++ R D + K+ + LL +
Sbjct: 592 LRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 216/474 (45%), Gaps = 21/474 (4%)
Query: 62 LNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLP 121
+ F + S+ A ++F M + W +L+++ LS + + ++ M + P
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTK-RSLYQWNTLLKS-LSREKQWEEVLYHFSHMFRDEEKP 58
Query: 122 SGFTFSSVLNACGRVPAMVEGKQVHGRLVQS-GFGGNKIVQTALLGMYAKSGCVCDARDV 180
FT L ACG + + G+ +HG + + G + V ++L+ MY K G + +A +
Sbjct: 59 DNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRM 118
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM-----GERNSFTWTTMVAGYASCGD 235
FD ++ D+V W++M+ G+ K +A F M + T T+V+ +
Sbjct: 119 FDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSN 178
Query: 236 MKAAKELYDVMSDK---DGVTWV-AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
+ + ++ + + + ++ V +++ Y K EA LF I +D +W+ ++A
Sbjct: 179 SRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI-AEKDVISWSTVIA 237
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDR 351
CY QNG A E + +F ++ + ++ + ACA D+ + +
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
+ VS AL++M+ KC + + A+ FS + +D+ ++ A+I+ F +G + +I+ F M
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML 357
Query: 412 KE-GLKPNQVTFIGVLNACSSSGLVEEG-CRFFQIMTGVFDIEPLPEHYACIVDLLGRAG 469
E +P+ + + VL +CS G +E+ C ++ FD P A +V+L R G
Sbjct: 358 LENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG--ASLVELYSRCG 415
Query: 470 QLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLL---EIDPED 520
L A S + D W SL+ +HG H++ E+ P +
Sbjct: 416 SLGNA-SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNE 468
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 271/550 (49%), Gaps = 60/550 (10%)
Query: 60 RVLNFS--SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQS 117
R++ FS + N+ A LF P+ F++ ++I A S + C Y+ M +
Sbjct: 71 RLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSK---NECFGLYSSMIRH 127
Query: 118 GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSG-FGGNKIVQTALLGMYAKSGCVCD 176
V P TF ++ A + E KQ+H ++ SG + +L+ Y + G
Sbjct: 128 RVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGV 184
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFT---------- 222
A VF M DV ++ MI GYAK +EA L+ M E + +T
Sbjct: 185 AEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
Query: 223 ------------W---------------TTMVAGYASCGDMKAAKELYDVMSDKDGVTWV 255
W ++ Y C + AK +D M KD +W
Sbjct: 245 LSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWN 304
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGI-EMFKEVRQA-K 313
M+ G+ +LG++ A+ +FD +P +D +W ++L Y++ G + + E+F E+ K
Sbjct: 305 TMVVGFVRLGDMEAAQAVFDQMP-KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363
Query: 314 IKITEVAMVGAISACA---QLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNID 370
+K V MV IS A +L R + L ++ +S+ALI+M+ KCG I+
Sbjct: 364 VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQ---LKGDAFLSSALIDMYCKCGIIE 420
Query: 371 LAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACS 430
A+ F T +D+ +++MIT A HG Q A+ LF RM +EG+ PN VT + VL ACS
Sbjct: 421 RAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS 480
Query: 431 SSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLI-KENATSADATT 489
SGLVEEG F M F +P EHY +VDLL RAG++E A ++ K+ +
Sbjct: 481 HSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSM 540
Query: 490 WGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSK 549
WGS+L+ACR ++E E A LL+++PE G YVLL+N+YA+ +W ++ ++ M
Sbjct: 541 WGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMEN 600
Query: 550 KGIKKPSGYS 559
+G+KK +GYS
Sbjct: 601 RGVKKTAGYS 610
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 246/508 (48%), Gaps = 27/508 (5%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL-PSGFTFSSVLNA 132
A ++F +P D W+S+I F F +S M GV P+ + F S L A
Sbjct: 222 ASRVFYGIP-MKDLISWSSIIAGFSQLGFEFE-ALSHLKEMLSFGVFHPNEYIFGSSLKA 279
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
C + G Q+HG ++S GN I +L MYA+ G + AR VFD ++ D +W
Sbjct: 280 CSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASW 339
Query: 193 TAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGV 252
+I G A EA +F M + F + C K M+ G+
Sbjct: 340 NVIIAGLANNGYADEAVSVFSQM-RSSGFIPDAISLRSLLCAQTKP-------MALSQGM 391
Query: 253 TWVAMIAGYGKLGNVTEAR----------------RLFDGIPVPQDASTWAAMLACYAQN 296
+ I +G L ++T LF+ D+ +W +L Q+
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
E + +FK + ++ + + M + C ++ +++ + + + + +
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
N LI+M++KCG++ A R F +M RD+ ++S +I +A+ G ++A+ LF M G++
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYS 476
PN VTF+GVL ACS GLVEEG + + M I P EH +C+VDLL RAG+L A
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Query: 477 LIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDK 536
I E D W +LL+AC+ GNV L + AA ++L+IDP +S +VLL +M+AS
Sbjct: 632 FIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGN 691
Query: 537 WVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
W A +++ M K +KK G SWI+ E
Sbjct: 692 WENAALLRSSMKKHDVKKIPGQSWIEIE 719
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 199/392 (50%), Gaps = 25/392 (6%)
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
T+ S++ AC ++ +G+++H ++ S + I+ +L MY K G + DAR+VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAK 240
+R++V++T++I GY++ EA L+ M + + F + +++ AS D+ K
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 241 ELY----DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQN 296
+L+ + S + A+IA Y + +++A R+F GIP+ +D +W++++A ++Q
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM-KDLISWSSIIAGFSQL 247
Query: 297 GYAKEGIEMFKEVRQAKI-KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIV 355
G+ E + KE+ + E ++ AC+ L +R H G C ++ +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL--LRPDYGSQIH---GLCIKSELA 302
Query: 356 SNA-----LINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
NA L +M+++CG ++ A R F + D +++ +I A +G + +A+ +F +M
Sbjct: 303 GNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Query: 411 PKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYAC--IVDLLGRA 468
G P+ ++ +L A + + +G QI + + L + C ++ +
Sbjct: 363 RSSGFIPDAISLRSLLCAQTKPMALSQG---MQIHSYIIKWGFLADLTVCNSLLTMYTFC 419
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVH 500
L ++L ++ +AD+ +W ++L AC H
Sbjct: 420 SDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 207/442 (46%), Gaps = 37/442 (8%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++FD MP + +TS+I + S I Y +M Q ++P F F S++ AC
Sbjct: 121 AREVFDFMPE-RNLVSYTSVITGY-SQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ GKQ+H ++++ + I Q AL+ MY + + DA VF G+ +D+++W+
Sbjct: 179 ASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWS 238
Query: 194 AMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELY--DVMSDKDG 251
++I G++++ EA M F + G +KA L D S G
Sbjct: 239 SIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG----SSLKACSSLLRPDYGSQIHG 294
Query: 252 VTWVAMIAG-----------YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAK 300
+ + +AG Y + G + ARR+FD I P D ++W ++A A NGYA
Sbjct: 295 LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP-DTASWNVIIAGLANNGYAD 353
Query: 301 EGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH---IEEGCCDRTLIVSN 357
E + +F ++R + +++ + CAQ + + +S + H I+ G L V N
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFL-ADLTVCN 410
Query: 358 ALINMHSKCGNIDLAWREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
+L+ M++ C ++ + F R D +++ ++TA +H + + + LF M +
Sbjct: 411 SLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE 470
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRF--FQIMTGVFDIEPLPEHYA--CIVDLLGRAGQLE 472
P+ +T +L C ++ G + + + TG+ PE + ++D+ + G L
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGL-----APEQFIKNGLIDMYAKCGSLG 525
Query: 473 RAYSLIKENATSADATTWGSLL 494
+A + ++ + D +W +L+
Sbjct: 526 QARRIF-DSMDNRDVVSWSTLI 546
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 7/205 (3%)
Query: 295 QNGYAKEGIEMFK-EVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTL 353
++ + +E +E F + + KI + I AC+ R + + DHI C
Sbjct: 43 KSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDT 102
Query: 354 IVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE 413
I++N +++M+ KCG++ A F M R++ +Y+++IT ++++G+ +AI L+ +M +E
Sbjct: 103 ILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQE 162
Query: 414 GLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYA--CIVDLLGRAGQL 471
L P+Q F ++ AC+SS V G Q+ V +E A ++ + R Q+
Sbjct: 163 DLVPDQFAFGSIIKACASSSDVGLG---KQLHAQVIKLESSSHLIAQNALIAMYVRFNQM 219
Query: 472 ERAYSLIKENATSADATTWGSLLAA 496
A S + D +W S++A
Sbjct: 220 SDA-SRVFYGIPMKDLISWSSIIAG 243
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 274/543 (50%), Gaps = 44/543 (8%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM-HQSGV 119
+++F +E + A K+FD M + WTS+I + + R + + + RM V
Sbjct: 175 LVHFYAECGELDSARKVFDEMSE-RNVVSWTSMICGY-ARRDFAKDAVDLFFRMVRDEEV 232
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
P+ T V++AC ++ + G++V+ + SG N ++ +AL+ MY K + A+
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGE---------------------- 217
+FD ++ AM Y + + EA +F+ M +
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 218 ------------RNSF-TW----TTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAG 260
RN F +W ++ Y C A ++D MS+K VTW +++AG
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 261 YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVR-QAKIKITEV 319
Y + G V A F+ +P ++ +W +++ Q +E IE+F ++ Q + V
Sbjct: 413 YVENGEVDAAWETFETMP-EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV 471
Query: 320 AMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM 379
M+ SAC L + ++ + +IE+ + + L++M S+CG+ + A F+++
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 380 RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGC 439
RD+ ++A I A A G ++ AI+LF M ++GLKP+ V F+G L ACS GLV++G
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 440 RFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRV 499
F M + + P HY C+VDLLGRAG LE A LI++ + W SLLAACRV
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 500 HGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYS 559
GNVE+ AA + + PE +G+YVLL+N+YAS +W V+ M +KG++KP G S
Sbjct: 652 QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Query: 560 WIQ 562
IQ
Sbjct: 712 SIQ 714
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 215/445 (48%), Gaps = 21/445 (4%)
Query: 68 KSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFS 127
+ ++ +A ++F+ + F++ SLIR + S I + RM SG+ P +TF
Sbjct: 80 RESLSFAKEVFENSESYGTCFMYNSLIRGYASS-GLCNEAILLFLRMMNSGISPDKYTFP 138
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
L+AC + A G Q+HG +V+ G+ + VQ +L+ YA+ G + AR VFD M +R
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 188 DVVAWTAMICGYAKVAMMVEARWLF-----DNMGERNSFTWTTMVAGYASCGDMKAAKEL 242
+VV+WT+MICGYA+ +A LF D NS T +++ A D++ +++
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 243 YDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGY 298
Y + + + + A++ Y K + A+RLFD + AM + Y + G
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQGL 317
Query: 299 AKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNA 358
+E + +F + + ++ ++M+ AIS+C+QLR+I + ++ + + NA
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 359 LINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
LI+M+ KC D A+R F M + + T+++++ + E+G+ A + F MP++ N
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK----N 433
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERA---Y 475
V++ +++ L EE F M + I G G L+ A Y
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 476 SLIKENATSAD---ATTWGSLLAAC 497
I++N D TT + + C
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRC 518
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 9/243 (3%)
Query: 248 DKDGVTWVAMIAGYGKLG---NVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
D D T ++A +LG +++ A+ +F+ + +++ YA +G E I
Sbjct: 61 DNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL 120
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH--IEEGCCDRTLIVSNALINM 362
+F + + I + +SACA+ R N + H I + + L V N+L++
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAKSR--AKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPK-EGLKPNQVT 421
+++CG +D A + F M R++ ++++MI +A ++DA+DLFFRM + E + PN VT
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKEN 481
+ V++AC+ +E G + + + IE + +VD+ + ++ A L E
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 482 ATS 484
S
Sbjct: 298 GAS 300
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 273/525 (52%), Gaps = 18/525 (3%)
Query: 51 HHFLSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCIST 110
HH L+ L+ V F EK + A LFD MP+ D WT++I + S + R
Sbjct: 44 HHILATNLI-VSYF--EKGLVEEARSLFDEMPD-RDVVAWTAMITGYASSNYNAR-AWEC 98
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK 170
+ M + G P+ FT SSVL +C + + G VHG +V+ G G+ V A++ MYA
Sbjct: 99 FHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYAT 158
Query: 171 SGCVCDAR-DVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTT 225
+A +F + ++ V WT +I G+ + + ++ M E + T
Sbjct: 159 CSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI 218
Query: 226 MVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAG----YGKLGNVTEARRLFDGIPVPQ 281
V AS + K+++ + + + + ++ Y + G ++EA+ F + +
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DK 277
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
D TW +++ ++ + E + MF+ ++ACA + + L
Sbjct: 278 DLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 336
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM-RCRDMYTYSAMITAFAEHGKS 400
I ++ + ++NALI+M++KCGNI + R F + R++ ++++M+ + HG
Sbjct: 337 GRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 401 QDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYAC 460
+A++LF +M G++P+++ F+ VL+AC +GLVE+G ++F +M + I P + Y C
Sbjct: 397 AEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNC 456
Query: 461 IVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG-NVELGETAARHLLEIDPE 519
+VDLLGRAG++ AY L++ D +TWG++L AC+ H N + AAR ++E+ P+
Sbjct: 457 VVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPK 516
Query: 520 DSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
GTYV+L+ +YA++ KWV V+K+M G KK +G SWI E
Sbjct: 517 MVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVE 561
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/510 (30%), Positives = 267/510 (52%), Gaps = 14/510 (2%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+ +F S+ N A+ F + + D F WTS+I A L+ + M G+
Sbjct: 271 MFSFYSKSGNPSEAYLSFRELGD-EDMFSWTSII-ASLARSGDMEESFDMFWEMQNKGMH 328
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P G S ++N G++ + +GK HG +++ F + V +LL MY K + A +
Sbjct: 329 PDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL 388
Query: 181 FDGMDDR-DVVAWTAMICGYAKVAMMVEARWLF---DNMG-ERNSFTWTTMVAGYASCGD 235
F + + + AW M+ GY K+ V+ LF N+G E +S + T++++ + G
Sbjct: 389 FCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGA 448
Query: 236 MKAAKEL--YDVMSDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
+ K L Y V + D V ++I YGK+G++T A R+F + TW AM+A
Sbjct: 449 VLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMIA 506
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDR 351
Y +++ I +F + K + + +V + AC + + +I E +
Sbjct: 507 SYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEM 566
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
L +S ALI+M++KCG+++ + F +D ++ MI+ + HG + AI LF +M
Sbjct: 567 NLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQME 626
Query: 412 KEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQL 471
+ +KP TF+ +L+AC+ +GLVE+G + F M +D++P +HY+C+VDLL R+G L
Sbjct: 627 ESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNL 685
Query: 472 ERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMY 531
E A S + S D WG+LL++C HG E+G A + DP++ G Y++LANMY
Sbjct: 686 EEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMY 745
Query: 532 ASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
++ KW AE +++M + G+ K +G+S +
Sbjct: 746 SAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 217/461 (47%), Gaps = 16/461 (3%)
Query: 77 LFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV---LPSGFTFSSVLNAC 133
+FD MP+ D WT++I + + +MH +G P+ T AC
Sbjct: 183 VFDEMPD-RDVVAWTAIISGHV-QNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQAC 240
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ A+ EG+ +HG V++G +K VQ+++ Y+KSG +A F + D D+ +WT
Sbjct: 241 SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWT 300
Query: 194 AMICGYAKVAMMVEA---RWLFDNMG-ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
++I A+ M E+ W N G + + ++ + K + +
Sbjct: 301 SIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH 360
Query: 250 ----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
D ++++ Y K ++ A +LF I + W ML Y + + IE+
Sbjct: 361 CFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIEL 420
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
F++++ I+I + IS+C+ + + + +L ++ + D T+ V N+LI+++ K
Sbjct: 421 FRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK 480
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
G++ +AWR F ++ T++AMI ++ +S+ AI LF RM E KP+ +T + +
Sbjct: 481 MGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTL 539
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA 485
L AC ++G +E G + +T + E A ++D+ + G LE++ L +
Sbjct: 540 LMACVNTGSLERGQMIHRYITET-EHEMNLSLSAALIDMYAKCGHLEKSRELF-DAGNQK 597
Query: 486 DATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVL 526
DA W +++ +HG+VE + E D + +G L
Sbjct: 598 DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFL 638
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 196/434 (45%), Gaps = 38/434 (8%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
D F+W S+I+A S+ + R + + M SG P FT V++AC + G V
Sbjct: 89 DIFLWNSIIKAHFSNGDYARS-LCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFV 147
Query: 146 HGRLVQ-SGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAK--- 201
HG +++ GF N V + + Y+K G + DA VFD M DRDVVAWTA+I G+ +
Sbjct: 148 HGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE 207
Query: 202 -------VAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKE--LYDVMSDKDGV 252
+ M A D R T+ G+ +C ++ A KE + K+G+
Sbjct: 208 SEGGLGYLCKMHSAGSDVDKPNPR------TLECGFQACSNLGALKEGRCLHGFAVKNGL 261
Query: 253 -----TWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFK 307
+M + Y K GN +EA F + +D +W +++A A++G +E +MF
Sbjct: 262 ASSKFVQSSMFSFYSKSGNPSEAYLSFRELG-DEDMFSWTSIIASLARSGDMEESFDMFW 320
Query: 308 EVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCG 367
E++ + V + I+ ++ + A + C V N+L++M+ K
Sbjct: 321 EMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFE 380
Query: 368 NIDLAWREFSTMRCR-----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+ +A + F CR + ++ M+ + + I+LF ++ G++ + +
Sbjct: 381 LLSVAEKLF----CRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASA 436
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
V+++CS G V G + ++ ++DL G+ G L A+ + E
Sbjct: 437 TSVISSCSHIGAVLLG-KSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD 495
Query: 483 TSADATTWGSLLAA 496
T + TW +++A+
Sbjct: 496 T--NVITWNAMIAS 507
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 139/321 (43%), Gaps = 13/321 (4%)
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
C + ++ ++ + ++ G N V + L+ YA G + VF + RD+ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 193 TAMICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVAGYAS-----CGDMKAAKELY 243
++I + + F +M G+ + FT +V+ A G L
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 244 DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGI 303
D++ + + Y K G + +A +FD +P +D W A+++ + QNG ++ G+
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAIISGHVQNGESEGGL 212
Query: 304 EMFKEVRQAKIKITEV---AMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALI 360
++ A + + + AC+ L ++ L + + V +++
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMF 272
Query: 361 NMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQV 420
+ +SK GN A+ F + DM++++++I + A G +++ D+F+ M +G+ P+ V
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 421 TFIGVLNACSSSGLVEEGCRF 441
++N LV +G F
Sbjct: 333 VISCLINELGKMMLVPQGKAF 353
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 248/470 (52%), Gaps = 34/470 (7%)
Query: 96 AFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFG 155
A ++H+ H I + H + +++S +N R + E + + +G
Sbjct: 13 ALITHKNHANPKI----QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVE 68
Query: 156 GNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYA-KVAMMVEARWLFDN 214
N I ALL SGC D G + A ++ GYA K+ +
Sbjct: 69 PNHITFIALL-----SGC----GDFTSGSE-----ALGDLLHGYACKLGL---------- 104
Query: 215 MGERNSFTWTTMVAG-YASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRL 273
+RN T + G Y+ G K A+ ++D M DK+ VTW MI GY + G V A ++
Sbjct: 105 --DRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKM 162
Query: 274 FDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRD 333
FD +P +D +W AM+ + + GY +E + F+E++ + +K VA++ A++AC L
Sbjct: 163 FDKMP-ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGA 221
Query: 334 IRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITA 393
+ + ++ + VSN+LI+++ +CG ++ A + F M R + +++++I
Sbjct: 222 LSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVG 281
Query: 394 FAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEP 453
FA +G + +++ F +M ++G KP+ VTF G L ACS GLVEEG R+FQIM + I P
Sbjct: 282 FAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISP 341
Query: 454 LPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG-NVELGETAARH 512
EHY C+VDL RAG+LE A L++ + GSLLAAC HG N+ L E +H
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKH 401
Query: 513 LLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
L +++ + YV+L+NMYA+ KW GA +++ M G+KK G+S I+
Sbjct: 402 LTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIE 451
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 246/474 (51%), Gaps = 47/474 (9%)
Query: 137 PAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMI 196
PA GK++H ++++GF + + LL ++ K GC+ AR VFD + + A+ MI
Sbjct: 48 PAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMI 107
Query: 197 CGYAKVAMMVEARWLFDNMG---------------------------------------- 216
GY K ++ E L M
Sbjct: 108 SGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARII 167
Query: 217 ----ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARR 272
E + T +V Y G +++A+ +++ M D++ V +MI+GY G V +A
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 273 LFDGIPVPQDASTWAAMLACYAQNG-YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQL 331
+F+ V +D + AM+ ++++G AK ++M+ +++A I AC+ L
Sbjct: 228 IFNTTKV-KDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL 286
Query: 332 RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMI 391
+ + I + + + ++L++M++KCG I+ A R F M+ ++++++++MI
Sbjct: 287 TSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
Query: 392 TAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDI 451
+ ++G ++A++LF RM + ++PN VTF+G L+ACS SGLV++G F+ M + +
Sbjct: 347 DGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSM 406
Query: 452 EPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAAR 511
+P EHYACIVDL+GRAG L +A+ + D+ W +LL++C +HGNVEL AA
Sbjct: 407 KPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAAS 466
Query: 512 HLLEIDPED-SGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
L +++ + G Y+ L+N+YAS DKW ++++M ++ I K G SW +
Sbjct: 467 ELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 174/417 (41%), Gaps = 93/417 (22%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVL 130
+ YA ++FD +P P + +I +L H + + RM SG G+T S VL
Sbjct: 85 LSYARQVFDELPK-PTLSAYNYMISGYLKH-GLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 131 NACG-RVPAMVEGKQ----VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD 185
A R M+ + VH R+++ + ++ TAL+ Y KSG + AR VF+ M
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK 202
Query: 186 DRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDM-KAAKELYD 244
D +VV T+MI GY + +A +F+ ++ + MV G++ G+ K + ++Y
Sbjct: 203 DENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYI 262
Query: 245 VMSD----------------------------------KDGV-TWVAM----IAGYGKLG 265
M K GV T + M + Y K G
Sbjct: 263 SMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCG 322
Query: 266 NVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAI 325
+ +ARR+FD + ++ +W +M+ Y +NG +E +E+F +++ +I+ V +GA+
Sbjct: 323 GINDARRVFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGAL 381
Query: 326 SACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRD-- 383
SAC S G +D + F +M+ RD
Sbjct: 382 SAC-----------------------------------SHSGLVDKGYEIFESMQ-RDYS 405
Query: 384 ----MYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
M Y+ ++ G A + MP+ +P+ + +L++C+ G VE
Sbjct: 406 MKPKMEHYACIVDLMGRAGDLNKAFEFARAMPE---RPDSDIWAALLSSCNLHGNVE 459
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/517 (30%), Positives = 264/517 (51%), Gaps = 20/517 (3%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
VL E ++ A KLFD M +A T++I A+ + + + ++ M SG
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSEL-NAVSRTTMISAY-AEQGILDKAVGLFSGMLASGDK 181
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P ++++L + A+ G+Q+H ++++G N ++T ++ MY K G + A+ V
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDM 236
FD M + VA T ++ GY + +A LF ++ E +SF ++ ++ AS ++
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEEL 301
Query: 237 KAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLAC 292
K+++ ++ + + ++ Y K + A R F I P D S W+A+++
Sbjct: 302 NLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVS-WSAIISG 360
Query: 293 YAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAI-SACAQLRDIRMSNALTDHIEEGCCDR 351
Y Q +E ++ FK +R I +I AC+ L D + + R
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG----QVHADAIKR 416
Query: 352 TLIVS----NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLF 407
+LI S +ALI M+SKCG +D A F +M D+ ++A I+ A +G + +A+ LF
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF 476
Query: 408 FRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGR 467
+M G+KPN VTFI VL ACS +GLVE+G M +++ P +HY C++D+ R
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR 536
Query: 468 AGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLL 527
+G L+ A +K DA +W L+ C H N+ELGE A L ++DPED+ YVL
Sbjct: 537 SGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLP 596
Query: 528 ANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
N+Y KW A + KLM+++ +KK SWIQ +
Sbjct: 597 FNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEK 633
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 183/402 (45%), Gaps = 18/402 (4%)
Query: 113 RMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
M ++GV S +++ + AC + ++ G+ +H R+ + ++Q +L MY +
Sbjct: 73 EMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECR 132
Query: 173 CVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVA 228
+ DA +FD M + + V+ T MI YA+ ++ +A LF M G++ S +TT++
Sbjct: 133 SLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLK 192
Query: 229 GYASCGDMKAAKELYDVMSDKDGVTWVAMIAG----YGKLGNVTEARRLFDGIPVPQDAS 284
+ + ++++ + + ++ G Y K G + A+R+FD + V + +
Sbjct: 193 SLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVA 252
Query: 285 TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI 344
M+ Y Q G A++ +++F ++ ++ + ACA L ++ + + +
Sbjct: 253 CTGLMVG-YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACV 311
Query: 345 EEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAI 404
+ + + V L++ + KC + + A R F +R + ++SA+I+ + + + ++A+
Sbjct: 312 AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAV 371
Query: 405 DLFFRM-PKEGLKPNQVTFIGVLNACSSSGLVEEGCRF-FQIMTGVFDIEPLPEHY--AC 460
F + K N T+ + ACS V C Q+ + Y +
Sbjct: 372 KTFKSLRSKNASILNSFTYTSIFQACS----VLADCNIGGQVHADAIKRSLIGSQYGESA 427
Query: 461 IVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGN 502
++ + + G L+ A + E+ + D W + ++ +GN
Sbjct: 428 LITMYSKCGCLDDANEVF-ESMDNPDIVAWTAFISGHAYYGN 468
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 136/334 (40%), Gaps = 48/334 (14%)
Query: 301 EGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALI 360
E E +E+ +A + ++ + AC +LR + L D + G + ++++ N ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 361 NMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQV 420
M+ +C +++ A + F M + + + MI+A+AE G A+ LF M G KP
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 421 TFIGVLNACSSSGLVEEG------------CRFFQIMTG----------------VFDIE 452
+ +L + + ++ G C I TG VFD
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 453 PLPEHYACIVDLLG--RAGQLERAYSLIKENATSA---DATTWGSLLAACRVHGNVELGE 507
+ + AC ++G +AG+ A L + T D+ + +L AC + LG+
Sbjct: 246 AVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGK 305
Query: 508 TAARHLLEIDPEDSGTY-VLLANMYASQDKWVGAEVVKKLMSKKGIKKP---------SG 557
+ ++ E + L + Y + A + + I++P SG
Sbjct: 306 QIHACVAKLGLESEVSVGTPLVDFYIKCSSFESA-----CRAFQEIREPNDVSWSAIISG 360
Query: 558 YSWIQREISRQQTADSIKKKHFNLLADFSQSDIF 591
Y + + +T S++ K+ ++L F+ + IF
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/567 (28%), Positives = 279/567 (49%), Gaps = 80/567 (14%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A K+FD +P+ +A W +L+ ++ + + I ++ M + GV P+ T S+ L+A
Sbjct: 227 ASKVFDEIPD-RNAVAWNALMVGYVQNGKN-EEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ + EGKQ H + +G + I+ T+LL Y K G + A VFD M ++DVV W
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 194 AMICGYAKVAMMVEARWL----------FD-----------------NMGE-------RN 219
+I GY + ++ +A ++ +D +G+ R+
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRH 404
Query: 220 SFTWTTMVAG-----YASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLF 274
SF ++A YA CG + AK+++D +KD + W ++A Y + G EA RLF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 275 DGIP---VPQDASTW-----------------------------------AAMLACYAQN 296
G+ VP + TW M+ QN
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQN 524
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLI-V 355
G ++E I ++++++ ++ ++ A+SACA L + + + +I +L+ +
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584
Query: 356 SNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
+L++M++KCG+I+ A + F + ++ +AMI+A+A +G ++AI L+ + GL
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGL 644
Query: 416 KPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAY 475
KP+ +T VL+AC+ +G + + F + ++P EHY +VDLL AG+ E+A
Sbjct: 645 KPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKAL 704
Query: 476 SLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQD 535
LI+E DA SL+A+C EL + +R LLE +PE+SG YV ++N YA +
Sbjct: 705 RLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEG 764
Query: 536 KWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
W ++++M KG+KK G SWIQ
Sbjct: 765 SWDEVVKMREMMKAKGLKKKPGCSWIQ 791
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 209/415 (50%), Gaps = 13/415 (3%)
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK 170
+ M ++ + P F +V ACG + G+ VHG +V+SG V ++L MY K
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 171 SGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTM 226
G + DA VFD + DR+ VAW A++ GY + EA LF +M E T +T
Sbjct: 221 CGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTC 280
Query: 227 VAGYASCGDMKAAKELYDVM----SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQD 282
++ A+ G ++ K+ + + + D + +++ Y K+G + A +FD + +D
Sbjct: 281 LSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM-FEKD 339
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
TW +++ Y Q G ++ I M + +R K+K V + +SA A+ ++++ +
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQD 402
+ + +++++ +++M++KCG+I A + F + +D+ ++ ++ A+AE G S +
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGE 459
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
A+ LF+ M EG+ PN +T+ ++ + +G V+E F M I P + ++
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMM 518
Query: 463 DLLGRAGQLERAYSLIK---ENATSADATTWGSLLAACRVHGNVELGETAARHLL 514
+ + + G E A ++ E+ +A + L+AC ++ +G T +++
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYII 573
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 186/384 (48%), Gaps = 19/384 (4%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSG--FGGNKIVQTALLGMYAKSGCVCDARDVFDG 183
+ +L C + GKQ+H R++++G + N+ ++T L+ YAK + A +F
Sbjct: 73 YGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSK 132
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGY-ASCGDMKAAK-- 240
+ R+V +W A+I ++ + A F M E F +V +CG +K ++
Sbjct: 133 LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG 192
Query: 241 ---ELYDVMSDKDGVTWVA--MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQ 295
Y V S + +VA + YGK G + +A ++FD IP ++A W A++ Y Q
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALMVGYVQ 251
Query: 296 NGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDI---RMSNALTDHIEEGCCDRT 352
NG +E I +F ++R+ ++ T V + +SA A + + + S+A+ I G +
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA--IVNG-MELD 308
Query: 353 LIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPK 412
I+ +L+N + K G I+ A F M +D+ T++ +I+ + + G +DAI + M
Sbjct: 309 NILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRL 368
Query: 413 EGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLE 472
E LK + VT +++A + + ++ G + Q E + ++D+ + G +
Sbjct: 369 EKLKYDCVTLATLMSAAARTENLKLG-KEVQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 473 RAYSLIKENATSADATTWGSLLAA 496
A + ++ D W +LLAA
Sbjct: 428 DAKKVF-DSTVEKDLILWNTLLAA 450
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 121/248 (48%), Gaps = 3/248 (1%)
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKI 316
++ Y K + A LF + V ++ +WAA++ + G + + F E+ + +I
Sbjct: 113 LVIFYAKCDALEIAEVLFSKLRV-RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFP 171
Query: 317 TEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF 376
+ AC L+ R + ++ + + + V+++L +M+ KCG +D A + F
Sbjct: 172 DNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVF 231
Query: 377 STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
+ R+ ++A++ + ++GK+++AI LF M K+G++P +VT L+A ++ G VE
Sbjct: 232 DEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVE 291
Query: 437 EGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAA 496
EG + I V +E +++ + G +E A ++ + D TW +++
Sbjct: 292 EGKQSHAIAI-VNGMELDNILGTSLLNFYCKVGLIEYA-EMVFDRMFEKDVVTWNLIISG 349
Query: 497 CRVHGNVE 504
G VE
Sbjct: 350 YVQQGLVE 357
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 247/446 (55%), Gaps = 11/446 (2%)
Query: 127 SSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDD 186
SS++ A ++ + +H ++V+S + + L+G Y + G A +FD M +
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 187 RDVVAWTAMICGYAKVAMM-----VEARWLFDNMGER-NSFTWTTMVAGYASCGDMKAAK 240
RD+V+W ++I GY+ + V +R + +G R N T+ +M++ G + +
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 241 ELYDVMSDKDGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQN 296
++ ++ + V A I YGK G++T + +LF+ + + ++ +W M+ + QN
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSI-KNLVSWNTMIVIHLQN 213
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
G A++G+ F R+ + + + + +C + +R++ + I G ++
Sbjct: 214 GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT 273
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
AL++++SK G ++ + F + D ++AM+ A+A HG +DAI F M G+
Sbjct: 274 TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGIS 333
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYS 476
P+ VTF +LNACS SGLVEEG +F+ M+ + I+P +HY+C+VDLLGR+G L+ AY
Sbjct: 334 PDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYG 393
Query: 477 LIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDK 536
LIKE + WG+LL ACRV+ + +LG AA L E++P D YV+L+N+Y++
Sbjct: 394 LIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGL 453
Query: 537 WVGAEVVKKLMSKKGIKKPSGYSWIQ 562
W A ++ LM +KG+ + SG S+I+
Sbjct: 454 WKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 168/396 (42%), Gaps = 54/396 (13%)
Query: 70 NICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQS--GVLPSGFTFS 127
++C A KLFD MP D W SLI + S R + C +RM S G P+ TF
Sbjct: 82 DVC-AEKLFDEMPE-RDLVSWNSLISGY-SGRGYLGKCFEVLSRMMISEVGFRPNEVTFL 138
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
S+++AC + EG+ +HG +++ G V A + Y K+G + + +F+ + +
Sbjct: 139 SMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK 198
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMGER--NSFTWTTMVAGYASCGDMKAAKE---- 241
++V+W MI + + + E + NM R + T +A SC DM +
Sbjct: 199 NLVSWNTMIVIHLQNG-LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGI 257
Query: 242 ----LYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
++ S +T A++ Y KLG + ++ +F I P D+ W AMLA YA +G
Sbjct: 258 HGLIMFGGFSGNKCIT-TALLDLYSKLGRLEDSSTVFHEITSP-DSMAWTAMLAAYATHG 315
Query: 298 YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSN 357
+ ++ I+ F+ + I V ++AC+ + +EEG
Sbjct: 316 FGRDAIKHFELMVHYGISPDHVTFTHLLNACSH----------SGLVEEG---------K 356
Query: 358 ALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKP 417
SK ID + YS M+ G QDA L MP E P
Sbjct: 357 HYFETMSKRYRID-----------PRLDHYSCMVDLLGRSGLLQDAYGLIKEMPME---P 402
Query: 418 NQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEP 453
+ + +L AC + G + + + F++EP
Sbjct: 403 SSGVWGALLGACRVYKDTQLGTKAAERL---FELEP 435
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 114/241 (47%), Gaps = 12/241 (4%)
Query: 62 LNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLP 121
+N+ + ++ + KLF+ + + + W ++I L + ++ + + G P
Sbjct: 176 INWYGKTGDLTSSCKLFEDL-SIKNLVSWNTMIVIHLQN-GLAEKGLAYFNMSRRVGHEP 233
Query: 122 SGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVF 181
TF +VL +C + + + +HG ++ GF GNK + TALL +Y+K G + D+ VF
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 182 DGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMK 237
+ D +AWTAM+ YA +A F+ M + T+T ++ + G ++
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 238 AAKELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML-A 291
K ++ MS + + + M+ G+ G + +A L +P+ + W A+L A
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Query: 292 C 292
C
Sbjct: 414 C 414
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 269/558 (48%), Gaps = 79/558 (14%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A +LF+ MP D SL+ ++ + + + + ++ S T ++VL AC
Sbjct: 143 ARRLFNAMPE-KDVVTLNSLLHGYILN-GYAEEALRLFKELNFSA---DAITLTTVLKAC 197
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG--------------------- 172
+ A+ GKQ+H +++ G + + ++L+ +YAK G
Sbjct: 198 AELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLS 257
Query: 173 --------C--VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNS-- 220
C V ++R +FD +R V+ W +MI GY M +EA LF+ M RN
Sbjct: 258 ALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM--RNETR 315
Query: 221 --------------------------------------FTWTTMVAGYASCGDMKAAKEL 242
+T++ Y+ CG A +L
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 243 YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
+ + D + +MI Y G + +A+R+F+ I + +W +M ++QNG E
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIE-NKSLISWNSMTNGFSQNGCTVET 434
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+E F ++ + + EV++ ISACA + + + + D +VS++LI++
Sbjct: 435 LEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDL 494
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+ KCG ++ R F TM D +++MI+ +A +G+ +AIDLF +M G++P Q+TF
Sbjct: 495 YCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITF 554
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
+ VL AC+ GLVEEG + F+ M P EH++C+VDLL RAG +E A +L++E
Sbjct: 555 MVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEV 542
D + W S+L C +G +G+ AA ++E++PE+S YV L+ ++A+ W + +
Sbjct: 615 FDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSAL 674
Query: 543 VKKLMSKKGIKKPSGYSW 560
V+KLM + + K G SW
Sbjct: 675 VRKLMRENNVTKNPGSSW 692
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 158/314 (50%), Gaps = 6/314 (1%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGN-KIVQTALLGMYAKSGCVCDARDVFDGM 184
+ +L +C +Q +G L++ GF + IV LL MY++SG + AR++FD M
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYD 244
DR+ +W MI GY + FD M ER+ ++W +V+G+A G++ A+ L++
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 245 VMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
M +KD VT +++ GY G EA RLF + DA T +L A+ K G +
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQ 208
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+ ++ ++ ++ A+ D+RM++ + + I E D +L +ALI+ ++
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP-DDHSL---SALISGYA 264
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
CG ++ + F R + +++MI+ + + +A+ LF M E + + T
Sbjct: 265 NCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAA 323
Query: 425 VLNACSSSGLVEEG 438
V+NAC G +E G
Sbjct: 324 VINACIGLGFLETG 337
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 264/502 (52%), Gaps = 21/502 (4%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMH-QSGVLPSGFTFSSVLNACGRVPAMVEGK 143
P++ W +LI F+ R + M ++ V TF+ +L K
Sbjct: 165 PNSVSWNALIAGFVQVR-DIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK 223
Query: 144 QVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD-DRDVVAWTAMICGYAKV 202
QVH ++++ G + A++ YA G V DA+ VFDG+ +D+++W +MI G++K
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 203 AMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWV--- 255
+ A LF M E + +T+T +++ + K L+ M K G+ V
Sbjct: 284 ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHG-MVIKKGLEQVTSA 342
Query: 256 --AMIAGYGKL--GNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQ 311
A+I+ Y + G + +A LF+ + +D +W +++ +AQ G +++ ++ F +R
Sbjct: 343 TNALISMYIQFPTGTMEDALSLFESLK-SKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 312 AKIKITEVAMVGAISACAQLRDIRMSNAL-TDHIEEGCCDRTLIVSNALINMHSKCGNID 370
++IK+ + A + +C+ L +++ + + G ++S +LI M+SKCG I+
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVIS-SLIVMYSKCGIIE 460
Query: 371 LAWREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNAC 429
A + F + + ++AMI +A+HG Q ++DLF +M + +K + VTF +L AC
Sbjct: 461 SARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTAC 520
Query: 430 SSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATT 489
S +GL++EG +M V+ I+P EHYA VDLLGRAG + +A LI+ + D
Sbjct: 521 SHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMV 580
Query: 490 WGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSK 549
+ L CR G +E+ A HLLEI+PED TYV L++MY+ KW VKK+M +
Sbjct: 581 LKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKE 640
Query: 550 KGIKKPSGYSWIQREISRQQTA 571
+G+KK G+SWI EI Q A
Sbjct: 641 RGVKKVPGWSWI--EIRNQVKA 660
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 219/455 (48%), Gaps = 18/455 (3%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV 119
R+L+ + + YA+ LFD MP D+ W ++I + S + M +SG
Sbjct: 40 RILDSYIKFGFLGYANMLFDEMPK-RDSVSWNTMISGYTSC-GKLEDAWCLFTCMKRSGS 97
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
G++FS +L V G+QVHG +++ G+ N V ++L+ MYAK V DA +
Sbjct: 98 DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFE 157
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFT--------WTTMVAGYA 231
F + + + V+W A+I G+ +V + A WL M + + T T++
Sbjct: 158 AFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPM 217
Query: 232 SCGDMKAAKELYDVMSDKDGVTWV-AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML 290
C +K + + +T AMI+ Y G+V++A+R+FDG+ +D +W +M+
Sbjct: 218 FCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMI 277
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
A ++++ + E+F ++++ ++ G +SAC+ +L + + +
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 351 RTLIVSNALINMHSK--CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFF 408
+ +NALI+M+ + G ++ A F +++ +D+ +++++IT FA+ G S+DA+ F
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397
Query: 409 RMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMT--GVFDIEPLPEHYACIVDLLG 466
+ +K + F +L +CS ++ G + + T G E + + ++ +
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFV---ISSLIVMYS 454
Query: 467 RAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
+ G +E A ++ ++ W +++ HG
Sbjct: 455 KCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 171/415 (41%), Gaps = 92/415 (22%)
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
H ++ G + V +L Y K G + A +FD M RD V+W MI GY +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 206 VEARWLFD---------------------------NMGER------------NSFTWTTM 226
+A LF ++GE+ N + +++
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 227 VAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIP----VPQD 282
V YA C ++ A E + +S+ + V+W A+IAG+ ++ ++ A L + V D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
A T+A +L + ++Q K+ ++ + I+ C
Sbjct: 203 AGTFAPLLTLLDDPMFC-------NLLKQVHAKVLKLGLQHEITIC-------------- 241
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM-RCRDMYTYSAMITAFAEHGKSQ 401
NA+I+ ++ CG++ A R F + +D+ ++++MI F++H +
Sbjct: 242 --------------NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKE 287
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI 461
A +LF +M + ++ + T+ G+L+ACS EE F + + G+ + L + +
Sbjct: 288 SAFELFIQMQRHWVETDIYTYTGLLSACSG----EEHQIFGKSLHGMVIKKGLEQVTSAT 343
Query: 462 VDLLGR-----AGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAAR 511
L+ G +E A SL E+ S D +W S++ G L E A +
Sbjct: 344 NALISMYIQFPTGTMEDALSLF-ESLKSKDLISWNSIITGFAQKG---LSEDAVK 394
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 254/505 (50%), Gaps = 48/505 (9%)
Query: 130 LNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDV 189
L C R + K +H +V+ G + L+ +Y K G A VFD M RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 190 VAWTAMICGYAKVAM----------------MVEARWLFD-------NMGE--------- 217
+AW +++ + + + ++F N+G
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 218 --------RNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTE 269
+ +++V YA CG + +AK ++D + K+ ++W AM++GY K G E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 270 ARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAI-SAC 328
A LF +PV ++ +W A+++ + Q+G E +F E+R+ ++ I + ++ +I AC
Sbjct: 190 ALELFRILPV-KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 329 AQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYS 388
A L + + D + +SNALI+M++KC ++ A FS MR RD+ +++
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV 448
++I A+HG+++ A+ L+ M G+KPN+VTF+G++ ACS G VE+G FQ MT
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 449 FDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGET 508
+ I P +HY C++DLLGR+G L+ A +LI D TW +LL+AC+ G ++G
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 509 AARHLL-EIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREISR 567
A HL+ +D TY+LL+N+YAS W ++ + + ++K G+S ++
Sbjct: 429 IADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKET 488
Query: 568 Q-----QTADSIKKKHFNLLADFSQ 587
+ +T+ +K+ F LL +
Sbjct: 489 EVFYAGETSHPLKEDIFRLLKKLEE 513
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/558 (22%), Positives = 233/558 (41%), Gaps = 104/558 (18%)
Query: 56 PLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMH 115
PL ++N + +A ++FD MP+ D W S++ A + +
Sbjct: 39 PLANTLVNVYGKCGAASHALQVFDEMPH-RDHIAWASVLTALNQANLSGKTLSVFSSVGS 97
Query: 116 QSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVC 175
SG+ P F FS+++ AC + ++ G+QVH + S + +++V+++L+ MYAK G +
Sbjct: 98 SSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLN 157
Query: 176 DARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGD 235
A+ VFD + ++ ++WTAM+ GYAK EA LF + +N ++WT +++G+ G
Sbjct: 158 SAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGK 217
Query: 236 MKAA--------KELYDVMSDK------------------------------DGVTWV-- 255
A +E D++ D ++
Sbjct: 218 GLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISN 277
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
A+I Y K +V A+ +F + +D +W +++ AQ+G A++ + ++ ++ +K
Sbjct: 278 ALIDMYAKCSDVIAAKDIFSRMR-HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVK 336
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWRE 375
EV VG I AC+ + +E+G R L S D R
Sbjct: 337 PNEVTFVGLIYACSHV----------GFVEKG---RELFQSM----------TKDYGIRP 373
Query: 376 FSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLV 435
+ Y+ ++ G +A +L MP P++ T+ +L+AC G
Sbjct: 374 -------SLQHYTCLLDLLGRSGLLDEAENLIHTMP---FPPDEPTWAALLSACKRQGRG 423
Query: 436 EEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLA 495
+ G R I D L + +L+ + I + A A+ WG +
Sbjct: 424 QMGIR--------------------IADHLVSSFKLKDPSTYILLSNIYASASLWGKVSE 463
Query: 496 ACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKP 555
A R G +E+ + +E+ E Y + +D + ++KKL + I+
Sbjct: 464 ARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIF---RLLKKLEEEMRIR-- 518
Query: 556 SGY----SWIQREISRQQ 569
+GY SWI ++ Q+
Sbjct: 519 NGYVPDTSWILHDMDEQE 536
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 268/523 (51%), Gaps = 16/523 (3%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVL 130
I YA K+FD +P ++ S+I + S + + Y +M + P TF+ +
Sbjct: 66 ISYARKVFDELPQ-RGVSVYNSMIVVY-SRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 131 NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
AC + +G+ V + V G+ + V +++L +Y K G + +A +F M RDV+
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
Query: 191 AWTAMICGYAKVAMMVEARWLFDNMGE----RNSFTWTTMVAGYASCGDMKAAKE----L 242
WT M+ G+A+ ++A + M R+ ++ GD K + L
Sbjct: 184 CWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 243 YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
Y + V +++ Y K+G + A R+F + + + A +W ++++ +AQNG A +
Sbjct: 244 YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM-MFKTAVSWGSLISGFAQNGLANKA 302
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI-EEGCCDRTLIVSNALIN 361
E E++ + V +VG + AC+Q+ ++ + +I + DR + + AL++
Sbjct: 303 FEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR--VTATALMD 360
Query: 362 MHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVT 421
M+SKCG + + F + +D+ ++ MI+ + HG Q+ + LF +M + ++P+ T
Sbjct: 361 MYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHAT 420
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKEN 481
F +L+A S SGLVE+G +F +M + I+P +HY C++DLL RAG++E A +I
Sbjct: 421 FASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSE 480
Query: 482 ATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAE 541
W +LL+ C H N+ +G+ AA +L+++P+ G L++N +A+ +KW
Sbjct: 481 KLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVA 540
Query: 542 VVKKLMSKKGIKKPSGYSWIQR--EISRQQTADSIKKKHFNLL 582
V+KLM ++K GYS I+ E+ D +H+++L
Sbjct: 541 KVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHML 583
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 185/404 (45%), Gaps = 24/404 (5%)
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSG--FGGNKIVQTALLGMY 168
+ +H++ + P F ++ R Q+H ++ +G G+ I + L+
Sbjct: 7 FCMLHRTLLCPKRIKFLQSISKLKR-----HITQIHAFVISTGNLLNGSSISRD-LIASC 60
Query: 169 AKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM-GER---NSFTWT 224
+ G + AR VFD + R V + +MI Y++ E L+D M E+ +S T+T
Sbjct: 61 GRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFT 120
Query: 225 TMVAGYASCGDMKAAKELY----DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVP 280
+ S ++ + ++ D D +++ Y K G + EA LF G
Sbjct: 121 MTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF-GKMAK 179
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL 340
+D W M+ +AQ G + + +E ++E++ V M+G + A L D +M ++
Sbjct: 180 RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSV 239
Query: 341 TDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKS 400
++ ++V +L++M++K G I++A R FS M + ++ ++I+ FA++G +
Sbjct: 240 HGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLA 299
Query: 401 QDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG--CRFFQIMTGVFDIEPLPEHY 458
A + M G +P+ VT +GVL ACS G ++ G + + V D
Sbjct: 300 NKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD----RVTA 355
Query: 459 ACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGN 502
++D+ + G L + + E+ D W ++++ +HGN
Sbjct: 356 TALMDMYSKCGALSSSREIF-EHVGRKDLVCWNTMISCYGIHGN 398
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 256/495 (51%), Gaps = 9/495 (1%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A K+F+ MP D W S+I +L+ F + + M + G P F+ S L AC
Sbjct: 184 AEKVFEEMPE-RDIVSWNSMISGYLALGDGF-SSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 134 GRVPAMVEGKQVHGRLVQSGF-GGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
V + GK++H V+S G+ +V T++L MY+K G V A +F+GM R++VAW
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301
Query: 193 TAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVA-GYASCGDMKAAKELYDVMSDK-- 249
MI YA+ + +A F M E+N + + + + ++ +
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGF 361
Query: 250 --DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFK 307
V A+I YG+ G + A +FD + ++ +W +++A Y QNG +E+F+
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGKNYSALELFQ 420
Query: 308 EVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCG 367
E+ + + + + A A+ + + +I + I+ N+L++M++ CG
Sbjct: 421 ELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCG 480
Query: 368 NIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN 427
+++ A + F+ + +D+ +++++I A+A HG + ++ LF M + PN+ TF +L
Sbjct: 481 DLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
Query: 428 ACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADA 487
ACS SG+V+EG +F+ M + I+P EHY C++DL+GR G A ++E A
Sbjct: 541 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA 600
Query: 488 TTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLM 547
WGSLL A R H ++ + E AA + +++ +++G YVLL NMYA +W +K LM
Sbjct: 601 RIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLM 660
Query: 548 SKKGIKKPSGYSWIQ 562
KGI + S S ++
Sbjct: 661 ESKGISRTSSRSTVE 675
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 220/468 (47%), Gaps = 43/468 (9%)
Query: 56 PLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMH 115
P L R L ++ + A +LFD M N DAF+W +I+ F S + + Y+RM
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEM-NKADAFLWNVMIKGFTSCGLYI-EAVQFYSRMV 122
Query: 116 QSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVC 175
+GV FT+ V+ + + ++ EGK++H +++ GF + V +L+ +Y K GC
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 176 DARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYA 231
DA VF+ M +RD+V+W +MI GY + + LF M + + F+ + + +
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 232 SCGDMKAAKELY-----DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTW 286
K KE++ + D + +++ Y K G V+ A R+F+G+ + ++ W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAW 301
Query: 287 AAMLACYAQNGYAKEGIEMFKEV-RQAKIK---ITEVAMVGAISACAQLRDIR---MSNA 339
M+ CYA+NG + F+++ Q ++ IT + ++ A SA + R I M
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA-SAILEGRTIHGYAMRRG 360
Query: 340 LTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGK 399
H +++ ALI+M+ +CG + A F M +++ +++++I A+ ++GK
Sbjct: 361 FLPH---------MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGK 411
Query: 400 SQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM------TGVFDIEP 453
+ A++LF + L P+ T +L A + S + EG + + +
Sbjct: 412 NYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS 471
Query: 454 LPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
L YA G LE A + D +W S++ A VHG
Sbjct: 472 LVHMYAM-------CGDLEDARKCFN-HILLKDVVSWNSIIMAYAVHG 511
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 256/506 (50%), Gaps = 16/506 (3%)
Query: 69 SNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSS 128
+++ YA K+F+ MP DA W +++ F H S + M + + P T +
Sbjct: 101 NSVDYAAKVFERMPE-RDATTWNAMLSGF-CQSGHTDKAFSLFREMRLNEITPDSVTVMT 158
Query: 129 VLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD--D 186
++ + ++ + +H ++ G V + Y K G + A+ VF+ +D D
Sbjct: 159 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
Query: 187 RDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFT--WTTMVAGYASCGDMKAAKELYD 244
R VV+W +M Y+ +A L+ M R F +T + ASC + + +
Sbjct: 219 RTVVSWNSMFKAYSVFGEAFDAFGLYCLM-LREEFKPDLSTFINLAASCQNPETLTQGRL 277
Query: 245 VMS-------DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
+ S D+D I+ Y K + AR LFD I + +W M++ YA+ G
Sbjct: 278 IHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD-IMTSRTCVSWTVMISGYAEKG 336
Query: 298 YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIE-EGCCDRTLIVS 356
E + +F + ++ K V ++ IS C + + + + GC +++
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 396
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
NALI+M+SKCG+I A F + + T++ MI +A +G +A+ LF +M K
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 456
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYS 476
PN +TF+ VL AC+ SG +E+G +F IM V++I P +HY+C+VDLLGR G+LE A
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516
Query: 477 LIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDK 536
LI+ + DA WG+LL AC++H NV++ E AA L ++P+ + YV +AN+YA+
Sbjct: 517 LIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGM 576
Query: 537 WVGAEVVKKLMSKKGIKKPSGYSWIQ 562
W G ++ +M ++ IKK G S IQ
Sbjct: 577 WDGFARIRSIMKQRNIKKYPGESVIQ 602
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 38/414 (9%)
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK 170
+ M + G P+ FTF V AC R+ + + VH L++S F + V TA + M+ K
Sbjct: 40 FREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVK 99
Query: 171 SGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTM 226
V A VF+ M +RD W AM+ G+ + +A LF M +S T T+
Sbjct: 100 CNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTL 159
Query: 227 VAGYASCGDMKAAKELYDVMSDKDGV--------TWVAMIAGYGKLGNVTEARRLFDGIP 278
+ + +K + ++ V + GV TW I+ YGK G++ A+ +F+ I
Sbjct: 160 IQSASFEKSLKLLEAMHAV-GIRLGVDVQVTVANTW---ISTYGKCGDLDSAKLVFEAID 215
Query: 279 V-PQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMS 337
+ +W +M Y+ G A + ++ + + + K + ++C +
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Query: 338 NALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEH 397
+ H D+ + N I+M+SK + A F M R +++ MI+ +AE
Sbjct: 276 RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEK 335
Query: 398 GKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH 457
G +A+ LF M K G KP+ VT + +++ C G +E G I+ +
Sbjct: 336 GDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW----------IDARADI 385
Query: 458 YAC----------IVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
Y C ++D+ + G + A + +N TW +++A ++G
Sbjct: 386 YGCKRDNVMICNALIDMYSKCGSIHEARDIF-DNTPEKTVVTWTTMIAGYALNG 438
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 301 EGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALI 360
E + +F+E+++ + ACA+L D+ + H+ + + V A +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 361 NMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQV 420
+M KC ++D A + F M RD T++AM++ F + G + A LF M + P+ V
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 421 TFIGVLNACSSSGLVEEGCRFFQIMTGV---FDIEPLPEHYACIVDLLGRAGQLERAYSL 477
T + ++ + S E+ + + M V ++ + G+ G L+ A L
Sbjct: 155 TVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA-KL 209
Query: 478 IKENATSADAT--TWGSLLAACRVHG 501
+ E D T +W S+ A V G
Sbjct: 210 VFEAIDRGDRTVVSWNSMFKAYSVFG 235
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/497 (29%), Positives = 253/497 (50%), Gaps = 12/497 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSG-VLPSGFTFSSVLNA 132
A KLFD MP + W ++++ + + F + + M SG P+ F + V +
Sbjct: 88 ARKLFDLMPE-RNVVSWCAMMKGYQNSGFDFE-VLKLFKSMFFSGESRPNEFVATVVFKS 145
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
C + EGKQ HG ++ G ++ V+ L+ MY+ +A V D + D+ +
Sbjct: 146 CSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVF 205
Query: 193 TAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS- 247
++ + GY + E + N+ T+ + + +++ D+ A +++ M
Sbjct: 206 SSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR 265
Query: 248 ---DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
+ + A+I YGK G V A+R+FD Q+ ++ Y Q+ +E +
Sbjct: 266 FGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHA-QNIFLNTTIMDAYFQDKSFEEALN 324
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+F ++ ++ E +++ A+L ++ + L + + ++V NAL+NM++
Sbjct: 325 LFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
K G+I+ A + FS M RD+ T++ MI+ + HG ++A++ F RM G PN++TFIG
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIG 444
Query: 425 VLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
VL ACS G VE+G +F + FD++P +HY CIV LL +AG + A ++
Sbjct: 445 VLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504
Query: 485 ADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVK 544
D W +LL AC V N LG+ A + +E P DSG YVLL+N++A +W G V+
Sbjct: 505 WDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVR 564
Query: 545 KLMSKKGIKKPSGYSWI 561
LM+ +G+KK G SWI
Sbjct: 565 SLMNNRGVKKEPGVSWI 581
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 179/393 (45%), Gaps = 25/393 (6%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLV---QSGFGGNKIVQTALLGMYAKSGCVCDARDVFD 182
+ +L C + G+ +H L+ QS + +L+ +Y K AR +FD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 183 GMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM---GER--NSFTWTTMVAGYASCGDMK 237
M +R+VV+W AM+ GY E LF +M GE N F T + ++ G ++
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 238 AAKEL------YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
K+ Y ++S + ++ Y EA R+ D +P D S +++ L+
Sbjct: 154 EGKQFHGCFLKYGLISHE--FVRNTLVYMYSLCSGNGEAIRVLDDLPYC-DLSVFSSALS 210
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDR 351
Y + G KEG+++ ++ + + ++ + LRD+ ++ + + +
Sbjct: 211 GYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
+ ALINM+ KCG + A R F ++++ + ++ A+ + ++A++LF +M
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 412 KEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYA---CIVDLLGRA 468
+ + PN+ TF +LN+ + L+++G ++ G+ H +V++ ++
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQG----DLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHG 501
G +E A T D TW ++++ C HG
Sbjct: 387 GSIEDARKAF-SGMTFRDIVTWNTMISGCSHHG 418
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 264/530 (49%), Gaps = 72/530 (13%)
Query: 56 PLLLRVLNFS--SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYAR 113
P + + L+FS S ++ YA+K + + P+ + W +IR F + R + IS Y +
Sbjct: 41 PFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN-YGWNFVIRGFSNSR-NPEKSISVYIQ 98
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
M + G+LP T+ ++ + R+ G +H +V KSG
Sbjct: 99 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV-------------------KSG- 138
Query: 174 VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASC 233
+ W IC T++ Y S
Sbjct: 139 ----------------LEWDLFIC--------------------------NTLIHMYGSF 156
Query: 234 GDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACY 293
D +A++L+D M K+ VTW +++ Y K G+V AR +FD + +D TW++M+ Y
Sbjct: 157 RDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS-ERDVVTWSSMIDGY 215
Query: 294 AQNGYAKEGIEMFKEV-RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRT 352
+ G + +E+F ++ R K EV MV I ACA L + + +I + T
Sbjct: 216 VKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLT 275
Query: 353 LIVSNALINMHSKCGNIDLAWREF--STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
+I+ +LI+M++KCG+I AW F ++++ D ++A+I A HG ++++ LF +M
Sbjct: 276 VILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM 335
Query: 411 PKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQ 470
+ + P+++TF+ +L ACS GLV+E FF+ + EP EHYAC+VD+L RAG
Sbjct: 336 RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGL 394
Query: 471 LERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANM 530
++ A+ I E + G+LL C HGN+EL ET + L+E+ P + G YV LAN+
Sbjct: 395 VKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANV 454
Query: 531 YASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREISRQQTADSIKKKHFN 580
YA ++ A +++ M KKG+KK +G+S + + +R + + K HF+
Sbjct: 455 YAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFI-AHDKTHFH 503
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/559 (28%), Positives = 263/559 (47%), Gaps = 62/559 (11%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHF-----------RHCI 108
++++F + + A +FD + +AF + +L+ A+ S +F C
Sbjct: 62 KLISFYTRQDRFRQALHVFDEI-TVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 109 STYARMHQSGVLPSGFTFSSVLNA---CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALL 165
S+ A P + S VL A C +QVHG +++ GF + V ++
Sbjct: 121 SSDA------ARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMI 174
Query: 166 GMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM---------- 215
Y K + AR VFD M +RDVV+W +MI GY++ + + ++ M
Sbjct: 175 TYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNG 234
Query: 216 ----------GERNSFTW--------------------TTMVAGYASCGDMKAAKELYDV 245
G+ + + ++ YA CG + A+ L+D
Sbjct: 235 VTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDE 294
Query: 246 MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
MS+KD VT+ A+I+GY G V EA LF + STW AM++ QN + +E I
Sbjct: 295 MSEKDSVTYGAIISGYMAHGLVKEAMALFSEME-SIGLSTWNAMISGLMQNNHHEEVINS 353
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
F+E+ + + V + + + +++ + D + V+ ++I+ ++K
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
G + A R F + R + ++A+ITA+A HG S A LF +M G KP+ VT V
Sbjct: 414 LGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA 485
L+A + SG + F M +DIEP EHYAC+V +L RAG+L A I +
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDP 533
Query: 486 DATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKK 545
A WG+LL V G++E+ A L E++PE++G Y ++AN+Y +W AE+V+
Sbjct: 534 IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRN 593
Query: 546 LMSKKGIKKPSGYSWIQRE 564
M + G+KK G SWI+ E
Sbjct: 594 KMKRIGLKKIPGTSWIETE 612
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 199/476 (41%), Gaps = 68/476 (14%)
Query: 135 RVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTA 194
R+P V Q+H R+V + + + L+ Y + A VFD + R+ ++ A
Sbjct: 36 RLPLHV--LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNA 93
Query: 195 MICGYAKVAMMVEARWLF----------DNMGERNSFTWTTMVAGYASCGDM---KAAKE 241
++ Y M +A LF + +S + + ++ + C D A++
Sbjct: 94 LLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQ 153
Query: 242 LYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
++ + D D MI Y K N+ AR++FD + +D +W +M++ Y+Q+G
Sbjct: 154 VHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMS-ERDVVSWNSMISGYSQSG 212
Query: 298 YAKEGIEMFKEVRQ-AKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
++ +M+K + + K V ++ AC Q D+ + + E L +
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL- 415
NA+I ++KCG++D A F M +D TY A+I+ + HG ++A+ LF M GL
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 416 ------------------------------KPNQVTFIGVLNACSSSGLVEEGCRF--FQ 443
+PN VT +L + + S ++ G F
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 444 IMTG----VFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRV 499
I G ++ + ++YA + LLG +R + K+ + A W +++ A V
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGA----QRVFDNCKDRSLIA----WTAIITAYAV 444
Query: 500 HGNVELGETAARHL--LEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIK 553
HG+ + + + L P+D +L+ S D + + +++K I+
Sbjct: 445 HGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIE 500
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 255/453 (56%), Gaps = 15/453 (3%)
Query: 128 SVLNA---CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
++LNA C + K++H ++ F N++V A + YAK G + A+ VF G+
Sbjct: 397 TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 456
Query: 185 DDRDVVAWTAMICGYAKVA---MMVEARWLFDNMGE-RNSFTWTTMVAGYASCGDMKAAK 240
+ V +W A+I G+A+ + ++A G +SFT ++++ + ++ K
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Query: 241 ELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQN 296
E++ + ++D ++++++ Y G + + LFD + + +W ++ Y QN
Sbjct: 517 EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAME-DKSLVSWNTVITGYLQN 575
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
G+ + +F+++ I++ ++M+ AC+ L +R+ + + + ++
Sbjct: 576 GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 635
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
+LI+M++K G+I + + F+ ++ + +++AMI + HG +++AI LF M + G
Sbjct: 636 CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 695
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYS 476
P+ +TF+GVL AC+ SGL+ EG R+ M F ++P +HYAC++D+LGRAGQL++A
Sbjct: 696 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 755
Query: 477 LIKEN-ATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQD 535
++ E + AD W SLL++CR+H N+E+GE A L E++PE YVLL+N+YA
Sbjct: 756 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 815
Query: 536 KWVGAEVVKKLMSKKGIKKPSGYSWIQREISRQ 568
KW V++ M++ ++K +G SWI E++R+
Sbjct: 816 KWEDVRKVRQRMNEMSLRKDAGCSWI--ELNRK 846
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 176/375 (46%), Gaps = 30/375 (8%)
Query: 77 LFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM-HQSGVLPSGFTFSSVLNACGR 135
+FD + + + F W ++I ++ S + + T+ M + +LP FT+ V+ AC
Sbjct: 142 VFDALRS-KNLFQWNAVISSY-SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 136 VPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAM 195
+ + G VHG +V++G + V AL+ Y G V DA +FD M +R++V+W +M
Sbjct: 200 MSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSM 259
Query: 196 ICGYAKVAMMVEARWLFDNMGERNS--------FTWTTMVAGYASCGDMKAAKELY---- 243
I ++ E+ L M E N T T++ A ++ K ++
Sbjct: 260 IRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 244 DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGI 303
+ DK+ V A++ Y K G +T A+ +F + ++ +W M+ ++ G
Sbjct: 320 KLRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTF 378
Query: 304 EMFKEVRQA--KIKITEVAMVGAISAC------AQLRDIRMSNALTDHIEEGCCDRTLIV 355
++ +++ +K EV ++ A+ C L+++ + + + +V
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE------LV 432
Query: 356 SNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
+NA + ++KCG++ A R F +R + + +++A+I A+ + ++D +M GL
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 492
Query: 416 KPNQVTFIGVLNACS 430
P+ T +L+ACS
Sbjct: 493 LPDSFTVCSLLSACS 507
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 141/289 (48%), Gaps = 30/289 (10%)
Query: 105 RHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTAL 164
R + + +M SG+LP FT S+L+AC ++ ++ GK+VHG ++++ + V ++
Sbjct: 478 RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 537
Query: 165 LGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERN-SFTW 223
L +Y G +C + +FD M+D+ +V+W +I GY + A +F M
Sbjct: 538 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597
Query: 224 TTMVAGYASC--------GDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFD 275
+M+ + +C G A L ++ D D ++I Y K G++T++ ++F+
Sbjct: 598 ISMMPVFGACSLLPSLRLGREAHAYALKHLLED-DAFIACSLIDMYAKNGSITQSSKVFN 656
Query: 276 GIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQ----- 330
G+ AS W AM+ Y +G AKE I++F+E+++ ++ +G ++AC
Sbjct: 657 GLKEKSTAS-WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 331 -----LRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWR 374
L ++ S L +++ C +I+M + G +D A R
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYAC---------VIDMLGRAGQLDKALR 755
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 153/317 (48%), Gaps = 17/317 (5%)
Query: 129 VLNACGRVPAMVEGKQVHGRLVQSG-FGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
+L A G+ + G+++H + S + ++ T ++ MYA G D+R VFD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMGER-----NSFTWTTMVAGYASCGDMKAAKEL 242
++ W A+I Y++ + E F M + FT+ ++ A D+ +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 243 YDVMSD----KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGY 298
+ ++ +D A+++ YG G VT+A +LFD +P ++ +W +M+ ++ NG+
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMIRVFSDNGF 268
Query: 299 AKEGI----EMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLI 354
++E EM +E +V + CA+ R+I + + + D+ L+
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 355 VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPK-- 412
++NAL++M+SKCG I A F +++ +++ M+ F+ G + D+ +M
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 413 EGLKPNQVTFIGVLNAC 429
E +K ++VT + + C
Sbjct: 389 EDVKADEVTILNAVPVC 405
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 199/346 (57%), Gaps = 1/346 (0%)
Query: 217 ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDG 276
+ + + ++V YA+CG + AA ++ M +D V+W +M+AGY K G V AR +FD
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 277 IPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRM 336
+P ++ TW+ M+ YA+N ++ I++F+ +++ + E MV IS+CA L +
Sbjct: 209 MP-HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 337 SNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAE 396
+++ + LI+ AL++M +CG+I+ A F + D ++S++I A
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 397 HGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPE 456
HG + A+ F +M G P VTF VL+ACS GLVE+G ++ M IEP E
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 457 HYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEI 516
HY CIVD+LGRAG+L A + I + +A G+LL AC+++ N E+ E L+++
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKV 447
Query: 517 DPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
PE SG YVLL+N+YA +W E ++ +M +K +KKP G+S I+
Sbjct: 448 KPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 192/457 (42%), Gaps = 85/457 (18%)
Query: 64 FSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSG 123
F+ + + YA+ +F + N P+ F++ LIR F S A Y +M +S + P
Sbjct: 60 FNKPTNLLGYAYGIFSQIQN-PNLFVFNLLIRCF-STGAEPSKAFGFYTQMLKSRIWPDN 117
Query: 124 FTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDG 183
TF ++ A + ++ G+Q H ++V+ GF + V+ +L+ MYA G + A +F
Sbjct: 118 ITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQ 177
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELY 243
M RDVV+WT+M+ GY K M+ AR +FD M RN FTW+ M+ GYA + A +L+
Sbjct: 178 MGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 244 DVMSDKDGVT----------------------------------------WVAMIAGYGK 263
+ M ++GV A++ + +
Sbjct: 238 EFMK-REGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWR 296
Query: 264 LGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVG 323
G++ +A +F+G+P D+ +W++++ A +G+A + + F ++ +V
Sbjct: 297 CGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTA 355
Query: 324 AISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRD 383
+SAC+ G ++ L + + H ++
Sbjct: 356 VLSACSH---------------GGLVEKGLEIYENMKKDHGIEPRLE------------- 387
Query: 384 MYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQ 443
Y ++ GK +A + +M +KPN +L AC E R
Sbjct: 388 --HYGCIVDMLGRAGKLAEAENFILKMH---VKPNAPILGALLGACKIYKNTEVAER--- 439
Query: 444 IMTGVFDIEPLPEH---YACIVDLLGRAGQLERAYSL 477
G I+ PEH Y + ++ AGQ ++ SL
Sbjct: 440 --VGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESL 474
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 270 ARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACA 329
A +F I P + + ++ C++ + + ++ +++I + I A +
Sbjct: 70 AYGIFSQIQNP-NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASS 128
Query: 330 QLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM---------- 379
++ + + I + V N+L++M++ CG I A R F M
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTS 188
Query: 380 ------RC---------------RDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
+C R+++T+S MI +A++ + AIDLF M +EG+ N
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVAN 248
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLI 478
+ + V+++C+ G +E G R ++ + L A +VD+ R G +E+A +
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA-LVDMFWRCGDIEKAIHVF 307
Query: 479 KENATSADATTWGSLLAACRVHGN 502
E D+ +W S++ VHG+
Sbjct: 308 -EGLPETDSLSWSSIIKGLAVHGH 330
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 266/497 (53%), Gaps = 14/497 (2%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A LFD MP D W ++I + + + + M V P T +SV++AC
Sbjct: 250 ARLLFDRMPR-RDIISWNAMISGYFEN-GMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ G+ +H ++ +GF + V +L MY +G +A +F M+ +D+V+WT
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 194 AMICGYAKVAMMVEA----RWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
MI GY + +A R + + + + T +++ A+ GD+ EL+ +
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 250 DGVTWVA----MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
+++V +I Y K + +A +F IP ++ +W +++A N E +
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNRCFEALIF 486
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
++++ ++ + + A++ACA++ + + H+ + NAL++M+ +
Sbjct: 487 LRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVR 545
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
CG ++ AW +F++ + +D+ +++ ++T ++E G+ ++LF RM K ++P+++TFI +
Sbjct: 546 CGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 604
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA 485
L CS S +V +G +F M + + P +HYAC+VDLLGRAG+L+ A+ I++ +
Sbjct: 605 LCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP 663
Query: 486 DATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKK 545
D WG+LL ACR+H ++LGE +A+H+ E+D + G Y+LL N+YA KW V++
Sbjct: 664 DPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRR 723
Query: 546 LMSKKGIKKPSGYSWIQ 562
+M + G+ +G SW++
Sbjct: 724 MMKENGLTVDAGCSWVE 740
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 205/422 (48%), Gaps = 19/422 (4%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARM-HQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
+ F W L+ + + + +F + Y RM GV P +TF VL CG +P + GK+
Sbjct: 159 NLFSWNVLVGGY-AKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKE 217
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
VH +V+ G+ + V AL+ MY K G V AR +FD M RD+++W AMI GY + M
Sbjct: 218 VHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGM 277
Query: 205 MVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVA 256
E LF M + + T T++++ GD + ++++ + D +
Sbjct: 278 CHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNS 337
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKI 316
+ Y G+ EA +LF + +D +W M++ Y N + I+ ++ + Q +K
Sbjct: 338 LTQMYLNAGSWREAEKLFSRME-RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396
Query: 317 TEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF 376
E+ + +SACA L D+ L + +IV+N LINM+SKC ID A F
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 377 STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
+ +++ +++++I + + +A+ +F R K L+PN +T L AC+ G +
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALM 515
Query: 437 EGCRFFQ--IMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLL 494
G + TGV + LP ++D+ R G++ A+S + N+ D T+W LL
Sbjct: 516 CGKEIHAHVLRTGVGLDDFLPN---ALLDMYVRCGRMNTAWS--QFNSQKKDVTSWNILL 570
Query: 495 AA 496
Sbjct: 571 TG 572
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 16/387 (4%)
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
F +++ C A EG +V+ + S + A L M+ + G + DA VF M
Sbjct: 96 VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNM-----GERNSFTWTTMVAGYASCGDMKAA 239
+R++ +W ++ GYAK EA L+ M + + +T+ ++ D+
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 240 KEL------YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACY 293
KE+ Y D D V A+I Y K G+V AR LFD +P +D +W AM++ Y
Sbjct: 216 KEVHVHVVRYGYELDIDVVN--ALITMYVKCGDVKSARLLFDRMP-RRDIISWNAMISGY 272
Query: 294 AQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTL 353
+NG EG+E+F +R + + + ISAC L D R+ + ++ +
Sbjct: 273 FENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 354 IVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE 413
V N+L M+ G+ A + FS M +D+ +++ MI+ + + AID + M ++
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 414 GLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLER 473
+KP+++T VL+AC++ G ++ G ++ I + ++++ + +++
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-LINMYSKCKCIDK 451
Query: 474 AYSLIKENATSADATTWGSLLAACRVH 500
A + N + +W S++A R++
Sbjct: 452 ALDIF-HNIPRKNVISWTSIIAGLRLN 477
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 210/355 (59%), Gaps = 8/355 (2%)
Query: 217 ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDG 276
+++ F T+++ Y+SCGD+++A+ ++D KD W +++ Y K G + +AR+LFD
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 277 IPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVR-----QAKIKITEVAMVGAISACAQL 331
+P ++ +W+ ++ Y G KE +++F+E++ +A ++ E M +SAC +L
Sbjct: 154 MP-ERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRL 212
Query: 332 RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR-DMYTYSAM 390
+ + +I++ + +++ ALI+M++KCG+++ A R F+ + + D+ YSAM
Sbjct: 213 GALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAM 272
Query: 391 ITAFAEHGKSQDAIDLFFRMP-KEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVF 449
I A +G + + LF M + + PN VTF+G+L AC GL+ EG +F++M F
Sbjct: 273 ICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEF 332
Query: 450 DIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETA 509
I P +HY C+VDL GR+G ++ A S I D WGSLL+ R+ G+++ E A
Sbjct: 333 GITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGA 392
Query: 510 ARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
+ L+E+DP +SG YVLL+N+YA +W+ + ++ M KGI K G S+++ E
Sbjct: 393 LKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVE 447
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 139/307 (45%), Gaps = 47/307 (15%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLSH-RAHFRHC-ISTYARMHQSGVLPSGFTFSS 128
I YA+ +F ++F+W +IRA + + + RH IS Y RM V P TF
Sbjct: 8 IAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 129 VLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD 188
+L + + G++ H +++ G + V+T+LL MY+ G + A+ VFD +D
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 189 VVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS- 247
+ AW +++ YAK ++ +AR LFD M ERN +W+ ++ GY CG K A +L+ M
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 248 --------------------------------------DK-----DGVTWVAMIAGYGKL 264
DK D V A+I Y K
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKC 247
Query: 265 GNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQA-KIKITEVAMVG 323
G++ A+R+F+ + +D ++AM+ C A G E ++F E+ + I V VG
Sbjct: 248 GSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVG 307
Query: 324 AISACAQ 330
+ AC
Sbjct: 308 ILGACVH 314
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 18/247 (7%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM-----H 115
V+N ++ I A KLFD MP + W+ LI ++ ++ + + M +
Sbjct: 134 VVNAYAKAGLIDDARKLFDEMPE-RNVISWSCLINGYVMC-GKYKEALDLFREMQLPKPN 191
Query: 116 QSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVC 175
++ V P+ FT S+VL+ACGR+ A+ +GK VH + + + ++ TAL+ MYAK G +
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 176 DARDVFDGM-DDRDVVAWTAMICGYAKVAMMVEARWLFDNMG-----ERNSFTWTTMVAG 229
A+ VF+ + +DV A++AMIC A + E LF M NS T+ ++
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 230 YASCGDMKAAKELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDAS 284
G + K + +M ++ G+T + M+ YG+ G + EA +P+ D
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 285 TWAAMLA 291
W ++L+
Sbjct: 372 IWGSLLS 378
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/539 (25%), Positives = 271/539 (50%), Gaps = 47/539 (8%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A LF M + D W +I + S+ F+ + +H+ V P T S+L C
Sbjct: 282 AASLFTRMGS-KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVC 340
Query: 134 GRVPAMVEGKQVHGRLVQSGFG-GNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
++ + GK++H +++ + + V AL+ YA+ G A F M +D+++W
Sbjct: 341 AQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISW 400
Query: 193 TAMICGYA-----------------------KVAMMVEARWLFDNMG------------- 216
A++ +A V ++ ++ + G
Sbjct: 401 NAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVK 460
Query: 217 ------ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDG-VTWVAMIAGYGKLGNVTE 269
E ++ YA CG+++ A +++ +S++ V++ ++++GY G+ +
Sbjct: 461 AGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDD 520
Query: 270 ARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACA 329
A+ LF + D +TW+ M+ YA++ E I +F+E++ ++ V ++ + CA
Sbjct: 521 AQMLFTEMST-TDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCA 579
Query: 330 QLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSA 389
QL + + +I G + + L+++++KCG++ A+ F + RD+ ++A
Sbjct: 580 QLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTA 638
Query: 390 MITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVF 449
M+ +A HG+ ++A+ ++ M + +KP+ V +L AC +GL+++G + + + V
Sbjct: 639 MVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVH 698
Query: 450 DIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETA 509
++P E YAC VDL+ R G+L+ AYS + + +A WG+LL AC + ++LG +
Sbjct: 699 GMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSV 758
Query: 510 ARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREISRQ 568
A HLL+ + +D+G +VL++NMYA+ KW G ++ LM KK +KKP+G SW++ + R
Sbjct: 759 ANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRN 817
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 204/435 (46%), Gaps = 33/435 (7%)
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVC-DARD 179
PS TF+ VL C R+ GK +H ++++G + +V AL+ MYAK G + DA
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEA-RWLFDNMGERNSFTWTTMVAGYASCGDM-- 236
FDG+ D+DVV+W A+I G+++ MM +A R + E + T+ C M
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 237 ----KAAKELYDVMSDKDGVTWV--------AMIAGYGKLGNVTEARRLFDGIPVPQDAS 284
++ ++++ + + +W+ ++++ Y ++G + EA LF + +D
Sbjct: 240 NIACRSGRQIHSYVVQR---SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG-SKDLV 295
Query: 285 TWAAMLACYAQNGYAKEGIEMFKE-VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH 343
+W ++A YA N + ++F V + + V ++ + CAQL D+ + +
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSY 355
Query: 344 I-EEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQD 402
I V NALI+ +++ G+ A+ FS M +D+ +++A++ AFA+ K
Sbjct: 356 ILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQ 415
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNAC---SSSGLVEEGCRFFQIMTGVFDIEPLPEHYA 459
++L + E + + VT + +L C G V+E + + G+ E P+
Sbjct: 416 FLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE-VHGYSVKAGLLHDEEEPKLGN 474
Query: 460 CIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLL--EID 517
++D + G +E A+ + + ++ SLL+ G V G +L E+
Sbjct: 475 ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLS-----GYVNSGSHDDAQMLFTEMS 529
Query: 518 PEDSGTYVLLANMYA 532
D T+ L+ +YA
Sbjct: 530 TTDLTTWSLMVRIYA 544
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 174/401 (43%), Gaps = 23/401 (5%)
Query: 116 QSGVLPSGF-----TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK 170
Q+ L SGF F V+ AC V + G+ +HG + + G V ++L MYAK
Sbjct: 9 QNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAK 68
Query: 171 SGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWL----FDNMGERNSFTWTTM 226
+ D + +F MD D V W ++ G + R+ F + + +S T+ +
Sbjct: 69 CRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIV 128
Query: 227 VAGYASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNV-TEARRLFDGIPVPQ 281
+ GD K ++ + +KD + A+++ Y K G + +A FDGI +
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI-ADK 187
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQL-RDIRMSNAL 340
D +W A++A +++N + F + + + + + CA + ++I +
Sbjct: 188 DVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGR 247
Query: 341 TDH---IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEH 397
H ++ + V N+L++ + + G I+ A F+ M +D+ +++ +I +A +
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 398 GKSQDAIDLFFRMPKEG-LKPNQVTFIGVLNACSSSGLVEEGCRFFQ-IMTGVFDIEPLP 455
+ A LF + +G + P+ VT I +L C+ + G I+ + +E
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS 367
Query: 456 EHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAA 496
A ++ R G AY +T D +W ++L A
Sbjct: 368 VGNA-LISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 244/492 (49%), Gaps = 54/492 (10%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
D F WT++I + H + + +M +GV+P+ T S ++AC + + +G +V
Sbjct: 316 DVFTWTAMISGLI-HNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV 374
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
H V+ GF + +V +L+ MY+K G + DAR VFD + ++DV W +MI GY +
Sbjct: 375 HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYC 434
Query: 206 VEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDG------VTWV 255
+A LF M + N TW TM++GY GD A +L+ M +KDG TW
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM-EKDGKVQRNTATWN 493
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
+IAG Y QNG E +E+F++++ ++
Sbjct: 494 LIIAG--------------------------------YIQNGKKDEALELFRKMQFSRFM 521
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWRE 375
V ++ + ACA L +M + + D V NAL + ++K G+I+ +
Sbjct: 522 PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTI 581
Query: 376 FSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLV 435
F M +D+ T++++I + HG A+ LF +M +G+ PN+ T ++ A G V
Sbjct: 582 FLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNV 641
Query: 436 EEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLA 495
+EG + F + + I P EH + +V L GRA +LE A I+E ++ W S L
Sbjct: 642 DEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLT 701
Query: 496 ACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKG---- 551
CR+HG++++ AA +L ++PE++ T +++ +YA +GA++ + L K
Sbjct: 702 GCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYA-----LGAKLGRSLEGNKPRRDN 756
Query: 552 -IKKPSGYSWIQ 562
+KKP G SWI+
Sbjct: 757 LLKKPLGQSWIE 768
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 207/446 (46%), Gaps = 39/446 (8%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV 119
++L+ ++ I A K+FD+M + F W+++I A+ S +R + M + GV
Sbjct: 120 KLLSMYAKCGCIADARKVFDSMRE-RNLFTWSAMIGAY-SRENRWREVAKLFRLMMKDGV 177
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
LP F F +L C + GK +H +++ G V ++L +YAK G + A
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNS----FTWTTMVAGYASCGD 235
F M +RDV+AW +++ Y + EA L M + TW ++ GY G
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 236 MKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQ 295
AA +L M + + D TW AM++
Sbjct: 298 CDAAMDLMQKM----------------------------ETFGITADVFTWTAMISGLIH 329
Query: 296 NGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRM-SNALTDHIEEGCCDRTLI 354
NG + ++MF+++ A + V ++ A+SAC+ L+ I S + ++ G D L
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVL- 388
Query: 355 VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG 414
V N+L++M+SKCG ++ A + F +++ +D+YT+++MIT + + G A +LF RM
Sbjct: 389 VGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDAN 448
Query: 415 LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERA 474
L+PN +T+ +++ +G E FQ M ++ + I+ + G+ + A
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Query: 475 YSLIKENATS---ADATTWGSLLAAC 497
L ++ S ++ T SLL AC
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
Query: 243 YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
+ + ++ D +++ Y K G + +AR++FD + ++ TW+AM+ Y++ +E
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR-ERNLFTWSAMIGAYSRENRWREV 165
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
++F+ + + + + + CA D+ + + + L VSN+++ +
Sbjct: 166 AKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAV 225
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
++KCG +D A + F MR RD+ +++++ A+ ++GK ++A++L M KEG+ P VT+
Sbjct: 226 YAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 260/500 (52%), Gaps = 19/500 (3%)
Query: 76 KLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTY---ARMHQSGVLPSGFTFSSVLNA 132
K+F MP + + W++++ + + R I + R + G S + F++VL++
Sbjct: 174 KVFAYMPE-RNTYTWSTMVSGYAT-RGRVEEAIKVFNLFLREKEEGS-DSDYVFTAVLSS 230
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
+ G+Q+H +++G G + AL+ MY+K + +A +FD DR+ + W
Sbjct: 231 LAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 193 TAMICGYAKVAMMVEARWLFDNM---GERNSFTWTTMVAGYASCGD---MKAAKELYDVM 246
+AM+ GY++ +EA LF M G + S T+V +C D ++ K+L+ +
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPS--EYTIVGVLNACSDICYLEEGKQLHSFL 348
Query: 247 S----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
++ A++ Y K G + +AR+ FD + +D + W ++++ Y QN +E
Sbjct: 349 LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEA 407
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+ +++ ++ A I + M + AC+ L + + + H + + + +AL M
Sbjct: 408 LILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTM 467
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+SKCG+++ F +D+ +++AMI+ + +G+ +A++LF M EG++P+ VTF
Sbjct: 468 YSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
+ +++ACS G VE G +F +M+ ++P +HYAC+VDLL RAGQL+ A I+
Sbjct: 528 VNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN 587
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEV 542
W LL+AC+ HG ELG A L+ + +S TYV L+ +Y + + E
Sbjct: 588 IDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVER 647
Query: 543 VKKLMSKKGIKKPSGYSWIQ 562
V K M G+ K G SWI+
Sbjct: 648 VWKHMRANGVSKEVGCSWIE 667
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 229/456 (50%), Gaps = 20/456 (4%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHR--AHFRHCISTYARMHQSG 118
++NF ++ + AH +F+ + C D W SLI + + + + + M
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAII-CKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQD 113
Query: 119 VLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDAR 178
+LP+ +T + + A + + G+Q H +V+ G+ V T+L+GMY K+G V D
Sbjct: 114 ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL 173
Query: 179 DVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFD------NMGERNSFTWTTMVAGYAS 232
VF M +R+ W+ M+ GYA + EA +F+ G + + +T +++ A+
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
Query: 233 CGDMKAAKELYDVMSDKDGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAA 288
+ ++++ + + +V A++ Y K ++ EA ++FD +++ TW+A
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS-SGDRNSITWSA 292
Query: 289 MLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC 348
M+ Y+QNG + E +++F + A IK +E +VG ++AC+ + + L + +
Sbjct: 293 MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG 352
Query: 349 CDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFF 408
+R L + AL++M++K G + A + F ++ RD+ ++++I+ + ++ +++A+ L+
Sbjct: 353 FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 409 RMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF-QIMTGVFDIE-PLPEHYACIVDLLG 466
RM G+ PN T VL ACSS +E G + + F +E P+ + + +
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG---SALSTMYS 469
Query: 467 RAGQLERAYSLIKENATSADATTWGSLLAACRVHGN 502
+ G LE +L+ + D +W ++++ +G
Sbjct: 470 KCGSLEDG-NLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 329 AQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYS 388
+Q R++ A+ I + +N L+N ++KCG + A F+ + C+D+ +++
Sbjct: 25 SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWN 84
Query: 389 AMITAFAEHG---KSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM 445
++IT ++++G S + LF M + + PN T G+ A SS ++ Q
Sbjct: 85 SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS---LQSSTVGRQAH 141
Query: 446 TGVFDIEPLPEHYA--CIVDLLGRAGQLE---RAYSLIKENATSADATTWGSLLAACRVH 500
V + + Y +V + +AG +E + ++ + E T TW ++++
Sbjct: 142 ALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT----YTWSTMVSGYATR 197
Query: 501 GNVE 504
G VE
Sbjct: 198 GRVE 201
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 260/504 (51%), Gaps = 24/504 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFL------SHRAHFRHCISTYARMHQSGVLPSGFTFS 127
A KLFD MP + W LI + +HRAH C +R+ + V +F
Sbjct: 90 ADKLFDEMP-LRNIVTWNILIHGVIQRDGDTNHRAHLGFCY--LSRILFTDVSLDHVSFM 146
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
++ C M G Q+H +V+ G + T+L+ Y K G + +AR VF+ + DR
Sbjct: 147 GLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDR 206
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMGERNS------FTWTTMVAGYASCGDMKAAKE 241
D+V W A++ Y M+ EA L MG + FT++++++ +
Sbjct: 207 DLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAI 266
Query: 242 LYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKE 301
L+ V D A++ Y K ++++AR F+ + V ++ +W AM+ +AQNG +E
Sbjct: 267 LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVV-RNVVSWNAMIVGFAQNGEGRE 325
Query: 302 GIEMFKEVRQAKIKITEVAMVGAISACAQLR---DIRMSNALTDHIEEGCCDRTLIVSNA 358
+ +F ++ ++ E+ +S+CA+ +I+ A+ ++G D L V+N+
Sbjct: 326 AMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV--TKKGSAD-FLSVANS 382
Query: 359 LINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
LI+ +S+ GN+ A F ++R D+ +++++I A A HG +++++ +F M ++ L+P+
Sbjct: 383 LISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPD 441
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLI 478
++TF+ VL+ACS GLV+EG R F+ MT + IE EHY C++DLLGRAG ++ A ++
Sbjct: 442 KITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVL 501
Query: 479 KENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWV 538
T + C +H E + A+ LLEI+P Y +L+N Y S+ W
Sbjct: 502 NSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWN 561
Query: 539 GAEVVKKLMSKKGIK-KPSGYSWI 561
A +++K + K G SW+
Sbjct: 562 QAALLRKRERRNCYNPKTPGCSWL 585
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 184/402 (45%), Gaps = 30/402 (7%)
Query: 143 KQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGY--- 199
KQ HG +V+ G + +Q LL Y K DA +FD M R++V W +I G
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 200 -------AKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGV 252
A + +R LF ++ + ++ ++ +MKA +L+ +M K G+
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVS-LDHVSFMGLIRLCTDSTNMKAGIQLHCLMV-KQGL 173
Query: 253 T-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFK 307
+++ YGK G + EARR+F+ + + +D W A+++ Y NG E + K
Sbjct: 174 ESSCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 308 EVRQAKIKIT--EVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
+ K + +SAC I + + + + V+ AL+NM++K
Sbjct: 233 LMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAK 288
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
++ A F +M R++ +++AMI FA++G+ ++A+ LF +M E L+P+++TF V
Sbjct: 289 SNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASV 348
Query: 426 LNACSSSGLVEEGCRFFQIMT--GVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT 483
L++C+ + E + ++T G D + ++ R G L A L +
Sbjct: 349 LSSCAKFSAIWEIKQVQAMVTKKGSADFLSVAN---SLISSYSRNGNLSEAL-LCFHSIR 404
Query: 484 SADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYV 525
D +W S++ A HG E +L+ D T++
Sbjct: 405 EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFL 446
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 239/477 (50%), Gaps = 29/477 (6%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
+ F+ +LIR L+ A F + + M + GV P TF VL + ++ G+ +
Sbjct: 90 NPFVLNALIRG-LTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
H +++ + V+ +L+ MYAK+G + A VF+ DR
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDR------------------ 190
Query: 206 VEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLG 265
+ + + W ++ GY DM A L+ M +++ +W +I GY G
Sbjct: 191 ---------IKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSG 241
Query: 266 NVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAI 325
+ A++LF+ +P ++ +W ++ ++Q G + I + E+ + +K E + +
Sbjct: 242 ELNRAKQLFELMP-EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVL 300
Query: 326 SACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMY 385
SAC++ + + +I + + AL++M++KCG +D A FS M +D+
Sbjct: 301 SACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL 360
Query: 386 TYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM 445
+++AMI +A HG+ AI F +M G KP++V F+ VL AC +S V+ G FF M
Sbjct: 361 SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM 420
Query: 446 TGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVEL 505
+ IEP +HY +VDLLGRAG+L A+ L++ + D TTW +L AC+ H
Sbjct: 421 RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRR 480
Query: 506 GETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
E+ +++LLE+DPE G+Y+ L +AS+ E + + K+ ++ G+S+I+
Sbjct: 481 AESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIE 537
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 12/237 (5%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A +LF+ MP + WT+LI F S + ISTY M + G+ P+ +T ++VL+AC
Sbjct: 246 AKQLFELMPE-KNVVSWTTLINGF-SQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ A+ G ++HG ++ +G ++ + TAL+ MYAK G + A VF M+ +D+++WT
Sbjct: 304 SKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWT 363
Query: 194 AMICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
AMI G+A +A F M GE+ + + ++ + ++ +D M
Sbjct: 364 AMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLD 423
Query: 250 DGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML-ACYAQNGYAK 300
+ +V ++ G+ G + EA L + +P+ D +TWAA+ AC A GY +
Sbjct: 424 YAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRR 480
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 203/351 (57%), Gaps = 5/351 (1%)
Query: 212 FDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEAR 271
FDN + T +++ YA G + + ++++ + D V AM+ + G+V AR
Sbjct: 139 FDN----DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 272 RLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQL 331
+LF+G+P +D W AM++ YAQ G ++E + +F ++ +K+ VAM+ +SAC QL
Sbjct: 195 KLFEGMP-ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQL 253
Query: 332 RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMI 391
+ +IE T+ ++ L+++++KCG+++ A F M +++YT+S+ +
Sbjct: 254 GALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSAL 313
Query: 392 TAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDI 451
A +G + ++LF M ++G+ PN VTF+ VL CS G V+EG R F M F I
Sbjct: 314 NGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGI 373
Query: 452 EPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAAR 511
EP EHY C+VDL RAG+LE A S+I++ A W SLL A R++ N+ELG A++
Sbjct: 374 EPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASK 433
Query: 512 HLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+LE++ + G YVLL+N+YA + W V++ M KG++K G S ++
Sbjct: 434 KMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVME 484
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 178/431 (41%), Gaps = 109/431 (25%)
Query: 52 HFLSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCIST- 110
HF+ + L S+ + YA+++ D P F S+IRA HC S
Sbjct: 43 HFVKAVAL------SDHKYLDYANQILDRSEK-PTLFALNSMIRA---------HCKSPV 86
Query: 111 -------YARMHQSG--VLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQ 161
Y R+ SG + P +T + ++ AC + G QVHG ++ GF + VQ
Sbjct: 87 PEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQ 146
Query: 162 TALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSF 221
T L+ +YA+ GC+ VF+ + D V TAM+ A+ +V AR LF+ M ER+
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 222 TWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAG----------------- 260
W M++GYA G+ + A ++ +M + +GV +++++
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 261 ------------------YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
Y K G++ +A +F G+ ++ TW++ L A NG+ ++
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSALNGLAMNGFGEKC 325
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+E+F ++Q + V V + C
Sbjct: 326 LELFSLMKQDGVTPNAVTFVSVLRGC---------------------------------- 351
Query: 363 HSKCGNIDLAWREFSTMRCR-----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKP 417
S G +D R F +MR + Y ++ +A G+ +DA+ + +MP +KP
Sbjct: 352 -SVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP---MKP 407
Query: 418 NQVTFIGVLNA 428
+ + +L+A
Sbjct: 408 HAAVWSSLLHA 418
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 242/466 (51%), Gaps = 22/466 (4%)
Query: 143 KQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDAR---DVFDGMDDRDVVAWTAMICGY 199
+Q+H L+++ N V L A S D VF + + MI +
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAF 87
Query: 200 AKVAMMVEARWLFDNMGERNSFTWTTMVAGYA-----SCGDMKAAKELY-DVMSD---KD 250
+ E LF ++ +S + + +A GD+ +++ + SD D
Sbjct: 88 SLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSD 147
Query: 251 GVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVR 310
+ ++ Y N T+A ++FD IP +D +W + +CY +N ++ + +F +++
Sbjct: 148 SLLMTTLMDLYSTCENSTDACKVFDEIP-KRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 311 Q---AKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCG 367
+K V + A+ ACA L + + D I+E L +SN L++M+S+CG
Sbjct: 207 NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCG 266
Query: 368 NIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN 427
++D A++ F MR R++ +++A+I+ A +G ++AI+ F M K G+ P + T G+L+
Sbjct: 267 SMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLS 326
Query: 428 ACSSSGLVEEGCRFFQIM-TGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSAD 486
ACS SGLV EG FF M +G F I+P HY C+VDLLGRA L++AYSLIK D
Sbjct: 327 ACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPD 386
Query: 487 ATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKL 546
+T W +LL ACRVHG+VELGE HL+E+ E++G YVLL N Y++ KW ++ L
Sbjct: 387 STIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSL 446
Query: 547 MSKKGIKKPSGYSWIQ-----REISRQQTADSIKKKHFNLLADFSQ 587
M +K I G S I+ E + K++ + +LA+ +Q
Sbjct: 447 MKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQ 492
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 144/297 (48%), Gaps = 28/297 (9%)
Query: 50 YHHFLSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAF-LSHRA--HFRH 106
+HHFLS L L ++ S ++ +L T+ +C ++IRAF LS FR
Sbjct: 46 FHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHC------NTMIRAFSLSQTPCEGFR- 98
Query: 107 CISTYARMHQSGVLPSGFTFSS-VLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALL 165
+ + ++ LP+ SS L C + ++ G Q+HG++ GF + ++ T L+
Sbjct: 99 ---LFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLM 155
Query: 166 GMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG-------ER 218
+Y+ DA VFD + RD V+W + Y + + LFD M +
Sbjct: 156 DLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKP 215
Query: 219 NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWV-----AMIAGYGKLGNVTEARRL 273
+ T + A+ G + K+++D + D++G++ +++ Y + G++ +A ++
Sbjct: 216 DGVTCLLALQACANLGALDFGKQVHDFI-DENGLSGALNLSNTLVSMYSRCGSMDKAYQV 274
Query: 274 FDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQ 330
F G+ ++ +W A+++ A NG+ KE IE F E+ + I E + G +SAC+
Sbjct: 275 FYGMR-ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSH 330
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 27/316 (8%)
Query: 55 SPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM 114
S L+ +++ S N A K+FD +P D W L +L ++ R + + +M
Sbjct: 148 SLLMTTLMDLYSTCENSTDACKVFDEIPK-RDTVSWNVLFSCYLRNK-RTRDVLVLFDKM 205
Query: 115 HQS---GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKS 171
V P G T L AC + A+ GKQVH + ++G G + L+ MY++
Sbjct: 206 KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRC 265
Query: 172 GCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGE----RNSFTWTTMV 227
G + A VF GM +R+VV+WTA+I G A EA F+ M + T T ++
Sbjct: 266 GSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLL 325
Query: 228 AGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFD-------GIPVP 280
+ + G + +D M + + YG + ++ RL D + +
Sbjct: 326 SACSHSGLVAEGMMFFDRMRSGE-FKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMK 384
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAK--------IKITEVAMVGAISACAQLR 332
D++ W +L +G + G + + + K + + + VG +LR
Sbjct: 385 PDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELR 444
Query: 333 DIRMSNALTDHIEEGC 348
+ + H + GC
Sbjct: 445 SLMKEKRI--HTKPGC 458
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 230/436 (52%), Gaps = 14/436 (3%)
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
+H ++ GF + L+ Y K + AR +FD M + +VV+WT++I GY +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 205 MVEARWLFDNMGER-----NSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTWV 255
A +F M E N +T+ ++ ++ + + K ++ + ++ V
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 256 AMIAGYGKLGNVTEARRLFDG-IPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
+++ YGK +V ARR+FD I ++ +W +M+ YAQN E IE+F+ A
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 315 --KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLA 372
+ + + ISAC+ L ++ + G + +V+ +L++M++KCG++ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 373 WREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS 432
+ F +RC + +Y++MI A A+HG + A+ LF M + PN VT +GVL+ACS S
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 433 GLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSAD--ATTW 490
GLV EG + +M + + P HY C+VD+LGR G+++ AY L K A+ A W
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 491 GSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKK 550
G+LL+A R+HG VE+ A++ L++ + + + Y+ L+N YA W +E ++ M +
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
Query: 551 GIKKPSGYSWIQREIS 566
G K SWI+ + S
Sbjct: 471 GNVKERACSWIENKDS 486
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 191/389 (49%), Gaps = 39/389 (10%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQS-GVLPSGFTFSSV 129
I A KLFD M P+ WTS+I + + ++ +S + +MH+ V P+ +TF+SV
Sbjct: 80 INTARKLFDEMCE-PNVVSWTSVISGY-NDMGKPQNALSMFQKMHEDRPVPPNEYTFASV 137
Query: 130 LNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD--DR 187
AC + GK +H RL SG N +V ++L+ MY K V AR VFD M R
Sbjct: 138 FKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGR 197
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMG------ERNSFTWTTMVAGYASCGDMKAAKE 241
+VV+WT+MI YA+ A EA LF + N F ++++ +S G ++ K
Sbjct: 198 NVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKV 257
Query: 242 LYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
+ +++ + + V +++ Y K G+++ A ++F I ++ +M+ A++G
Sbjct: 258 AHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC-HSVISYTSMIMAKAKHG 316
Query: 298 YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIE--EGCCDRTLIV 355
+ +++F E+ +I V ++G + AC+ S + + +E ++ +V
Sbjct: 317 LGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH------SGLVNEGLEYLSLMAEKYGVV 370
Query: 356 SNA-----LINMHSKCGNIDLAWREFSTMRC---RDMYTYSAMITAFAEHGKSQDAIDLF 407
++ +++M + G +D A+ T+ + + A+++A HG+ +++
Sbjct: 371 PDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR----VEIV 426
Query: 408 FRMPKEGLKPN-QVT--FIGVLNACSSSG 433
K ++ N QVT +I + NA + SG
Sbjct: 427 SEASKRLIQSNQQVTSAYIALSNAYAVSG 455
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 139/301 (46%), Gaps = 32/301 (10%)
Query: 74 AHKLFDTMPNCPDAFI-WTSLIRAFLSH-RAH-----FR--HCISTYARMHQSGVLPSGF 124
A ++FD+M + WTS+I A+ + R H FR + T R +Q F
Sbjct: 185 ARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQ-------F 237
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
+SV++AC + + GK HG + + G+ N +V T+LL MYAK G + A +F +
Sbjct: 238 MLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRI 297
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNM-GERNSFTWTTMVAGYASC---GDMKAAK 240
V+++T+MI AK + A LFD M R + + T++ +C G +
Sbjct: 298 RCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGL 357
Query: 241 ELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPV--PQDASTWAAMLACY 293
E +M++K GV + ++ G+ G V EA L I V Q A W A+L+
Sbjct: 358 EYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAG 417
Query: 294 AQNGYAKEGIEMFKEVRQAKIKITE--VAMVGAISACAQLRD---IRMSNALTDHIEEGC 348
+G + E K + Q+ ++T +A+ A + D +R+ + +++E
Sbjct: 418 RLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERA 477
Query: 349 C 349
C
Sbjct: 478 C 478
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 238/456 (52%), Gaps = 12/456 (2%)
Query: 113 RMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
R H GV F + AC + + G +HG +++G + V +L+ MYA+ G
Sbjct: 101 RRHCDGV--DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLG 158
Query: 173 CVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERN-SFTWTTMVAGYA 231
+ A+ VFD + R+ V W ++ GY K + E LF M + + T++
Sbjct: 159 TMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVK 218
Query: 232 SCGDMKAAK--------ELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDA 283
+CG++ A K + D+ ++I Y K + AR+LF+ V ++
Sbjct: 219 ACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFE-TSVDRNV 277
Query: 284 STWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH 343
W +++ +A+ A E ++F+++ + I + + + +C+ L +R ++ +
Sbjct: 278 VMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGY 337
Query: 344 IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDA 403
+ + + + I+M+++CGNI +A F M R++ ++S+MI AF +G ++A
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEA 397
Query: 404 IDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVD 463
+D F +M + + PN VTF+ +L+ACS SG V+EG + F+ MT + + P EHYAC+VD
Sbjct: 398 LDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVD 457
Query: 464 LLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGT 523
LLGRAG++ A S I A+ WG+LL+ACR+H V+L A LL ++PE S
Sbjct: 458 LLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSV 517
Query: 524 YVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYS 559
YVLL+N+YA W V++ M KG +K G S
Sbjct: 518 YVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 163/371 (43%), Gaps = 57/371 (15%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A K+FD +P ++ +W L++ +L + + M +G+ T ++ AC
Sbjct: 163 AQKVFDEIP-VRNSVLWGVLMKGYLKYSKD-PEVFRLFCLMRDTGLALDALTLICLVKAC 220
Query: 134 GRVPAMVEGKQVHGRLVQSGF-GGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
G V A GK VHG ++ F + +Q +++ MY K + +AR +F+ DR+VV W
Sbjct: 221 GNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMW 280
Query: 193 TAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVM-- 246
T +I G+AK VEA LF M N T ++ +S G ++ K ++ M
Sbjct: 281 TTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIR 340
Query: 247 --SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
+ D V + + I Y + GN+ AR +FD +P ++ +W++M+ + NG +E ++
Sbjct: 341 NGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINAFGINGLFEEALD 399
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
F +++ + V V +SAC+ HS
Sbjct: 400 CFHKMKSQNVVPNSVTFVSLLSACS---------------------------------HS 426
Query: 365 KCGNIDLAWREFSTMRCRDMYT------YSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
GN+ W++F +M RD Y+ M+ G+ +A MP +KP
Sbjct: 427 --GNVKEGWKQFESMT-RDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMP---VKPM 480
Query: 419 QVTFIGVLNAC 429
+ +L+AC
Sbjct: 481 ASAWGALLSAC 491
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 187/425 (44%), Gaps = 47/425 (11%)
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD-- 185
++L + + +QVH +++ GF ++ ++L Y +S + A F+ +
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 186 DRDVVAWTAMICGY--AKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAA 239
R+ +W ++ GY +K + L++ M +SF + G ++
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 240 KELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQ 295
++ + DKD +++ Y +LG + A+++FD IPV +++ W ++ Y +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPV-RNSVLWGVLMKGYLK 187
Query: 296 NGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD-HIEEGCCDRTLI 354
E +F +R + + + ++ + AC + ++ + I D++
Sbjct: 188 YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 355 VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG 414
+ ++I+M+ KC +D A + F T R++ ++ +I+ FA+ ++ +A DLF +M +E
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 415 LKPNQVTFIGVLNACSSSGLVEEG----------------------------CRFFQIMT 446
+ PNQ T +L +CSS G + G C Q+
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 447 GVFDIEPLPE--HYACIVDLLGRAGQLERA---YSLIKENATSADATTWGSLLAACRVHG 501
VFD+ P ++ +++ G G E A + +K ++ T+ SLL+AC G
Sbjct: 368 TVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
Query: 502 NVELG 506
NV+ G
Sbjct: 428 NVKEG 432
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 241/447 (53%), Gaps = 11/447 (2%)
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
T+ +++ AC R+ ++ K+V+G ++ +GF + + +L M+ K G + DAR +FD +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAK 240
+R++ ++ ++I G+ VEA LF M E + T+ M+ A G + K
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 241 ELYDVMSDKDGV---TWVA--MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQ 295
+L+ V + K GV T+V+ +I Y K G++ +AR F+ +P + W ++A YA
Sbjct: 245 QLH-VCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIAGYAL 302
Query: 296 NGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIV 355
+GY++E + + ++R + + I + + I +L + ++ + + ++
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 356 SNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
+ AL++ +SK G +D A F + +++ +++A++ +A HG+ DA+ LF +M +
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 416 KPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAY 475
PN VTF+ VL+AC+ SGL E+G F M+ V I+P HYAC+++LLGR G L+ A
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAI 482
Query: 476 SLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQD 535
+ I+ W +LL ACR+ N+ELG A L + PE G YV++ NMY S
Sbjct: 483 AFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMG 542
Query: 536 KWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
K A V + + KG+ +W++
Sbjct: 543 KTAEAAGVLETLESKGLSMMPACTWVE 569
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 12/228 (5%)
Query: 78 FDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVP 137
F+ MP W ++I + H + + M SGV FT S ++ ++
Sbjct: 282 FECMPE-KTTVAWNNVIAGYALH-GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLA 339
Query: 138 AMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMIC 197
+ KQ H L+++GF + TAL+ Y+K G V AR VFD + +++++W A++
Sbjct: 340 KLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMG 399
Query: 198 GYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVT 253
GYA +A LF+ M N T+ +++ A G + E++ MS+ G+
Sbjct: 400 GYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIK 459
Query: 254 -----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML-ACYAQ 295
+ MI G+ G + EA P+ + WAA+L AC Q
Sbjct: 460 PRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQ 507
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 226/397 (56%), Gaps = 12/397 (3%)
Query: 177 ARDVFDGMDDR-DVVAWTAMICGYAKVAMMVEARWLFDNMG-----ERNSFTWTTMVAGY 230
A VF ++ +V W +I GYA++ + A L+ M E ++ T+ ++
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 231 ASCGDMKAAKELYDVM--SDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTW 286
+ D++ + ++ V+ S + +V +++ Y G+V A ++FD +P +D W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP-EKDLVAW 190
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEE 346
+++ +A+NG +E + ++ E+ IK +V +SACA++ + + + ++ +
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 347 GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDL 406
R L SN L++++++CG ++ A F M ++ +++++I A +G ++AI+L
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 407 FFRMPK-EGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLL 465
F M EGL P ++TF+G+L ACS G+V+EG +F+ M + IEP EH+ C+VDLL
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 466 GRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYV 525
RAGQ+++AY IK + W +LL AC VHG+ +L E A +L+++P SG YV
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 526 LLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
LL+NMYAS+ +W + ++K M + G+KK G+S ++
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVE 467
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 179/371 (48%), Gaps = 36/371 (9%)
Query: 71 ICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL-PSGFTFSSV 129
+ YAHK+F + + FIW +LIR + + + S Y M SG++ P T+ +
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGY-AEIGNSISAFSLYREMRVSGLVEPDTHTYPFL 127
Query: 130 LNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDV 189
+ A + + G+ +H +++SGFG VQ +LL +YA G V A VFD M ++D+
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 190 VAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDV 245
VAW ++I G+A+ EA L+ M + + FT ++++ A G + K ++
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 246 MSDKDGVTW-----VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAK 300
M K G+T ++ Y + G V EA+ LFD + V +++ +W +++ A NG+ K
Sbjct: 248 MI-KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGK 305
Query: 301 EGIEMFKEVRQAK-IKITEVAMVGAISACAQ----------LRDIRMSNALTDHIEEGCC 349
E IE+FK + + + E+ VG + AC+ R +R + IE C
Sbjct: 306 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC 365
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFF 408
++++ ++ G + A+ +M + ++ + ++ A HG S A F
Sbjct: 366 ---------MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA--EFA 414
Query: 409 RMPKEGLKPNQ 419
R+ L+PN
Sbjct: 415 RIQILQLEPNH 425
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+L+ + ++ A+K+FD MP D W S+I F + ++ Y M+ G+
Sbjct: 162 LLHLYANCGDVASAYKVFDKMPE-KDLVAWNSVINGF-AENGKPEEALALYTEMNSKGIK 219
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P GFT S+L+AC ++ A+ GK+VH +++ G N LL +YA+ G V +A+ +
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSF-----TWTTMVAGYASCGD 235
FD M D++ V+WT++I G A EA LF M T+ ++ + CG
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 339
Query: 236 MKAAKELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML 290
+K E + M ++ + + M+ + G V +A +P+ + W +L
Sbjct: 340 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Query: 291 ACYAQNG 297
+G
Sbjct: 400 GACTVHG 406
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 158/591 (26%), Positives = 280/591 (47%), Gaps = 87/591 (14%)
Query: 74 AHKLFDTMPNC--PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLN 131
A +F+T+ D +W S+++A +SH + + + Y M Q G+ G+ +L
Sbjct: 108 ARNVFETVSLVLLSDLRLWNSILKANVSH-GLYENALELYRGMRQRGLTGDGYILPLILR 166
Query: 132 ACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVA 191
AC + + H +++Q G N V LL +Y K+G + DA ++F M R+ ++
Sbjct: 167 ACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMS 226
Query: 192 WTAMICGYAKVAMMVEARWLFDNMGERNSF-----TWTTMVAGYASCGDM---------- 236
W MI G+++ A +F+ M +R F TWT++++ ++ CG
Sbjct: 227 WNVMIKGFSQEYDCESAVKIFEWM-QREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Query: 237 ---------KAAKELYDVMSDKDGVTWV--------------------AMIAGYGKLGNV 267
+A + V ++ + ++ A+I YGK G V
Sbjct: 286 RMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKV 345
Query: 268 TEARRLFDGI--------------------------------------PVPQDASTWAAM 289
+A LF I V + TW ++
Sbjct: 346 KDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSV 405
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
+ G + +E F++++ +K+ V + +S CA+L + + + H+
Sbjct: 406 IKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSM 465
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFR 409
++V NAL+NM++KCG + F +R +D+ +++++I + HG ++ A+ +F R
Sbjct: 466 SENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDR 525
Query: 410 MPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAG 469
M G P+ + + VL+ACS +GLVE+G F M+ F +EP EHYACIVDLLGR G
Sbjct: 526 MISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVG 585
Query: 470 QLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLAN 529
L+ A ++K G+LL +CR+H NV++ E A L ++PE +G+Y+LL+N
Sbjct: 586 FLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSN 645
Query: 530 MYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREISRQQ-TADSIKKKHF 579
+Y++ +W + V+ L KK +KK SG SWI+ + + + ++ SI + F
Sbjct: 646 IYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEF 696
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 2/199 (1%)
Query: 249 KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVP--QDASTWAAMLACYAQNGYAKEGIEMF 306
+ G +I+ Y +LG + +AR +F+ + + D W ++L +G + +E++
Sbjct: 87 RSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELY 146
Query: 307 KEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKC 366
+ +RQ + + + AC L + A + + L V N L+ ++ K
Sbjct: 147 RGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKA 206
Query: 367 GNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVL 426
G + A+ F M R+ +++ MI F++ + A+ +F M +E KP++VT+ VL
Sbjct: 207 GRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVL 266
Query: 427 NACSSSGLVEEGCRFFQIM 445
+ S G E+ ++F +M
Sbjct: 267 SCHSQCGKFEDVLKYFHLM 285
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 237/440 (53%), Gaps = 19/440 (4%)
Query: 138 AMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKS--GCVCDARDVFDGMD-DRDVVAWTA 194
+M + +++H ++ +G + + LL A S G + A+ +FD D D W
Sbjct: 17 SMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNY 76
Query: 195 MICGYAKVA-----MMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSD- 248
+I G++ + ++ R L ++ + FT+ + SC +K+ + ++
Sbjct: 77 LIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALK---SCERIKSIPKCLEIHGSV 133
Query: 249 ------KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
D + +++ Y G+V A ++FD +PV +D +W M+ C++ G +
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPV-RDLVSWNVMICCFSHVGLHNQA 192
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+ M+K + + +V +S+CA + + M L + C+ + VSNALI+M
Sbjct: 193 LSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDM 252
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
++KCG+++ A F+ MR RD+ T+++MI + HG +AI F +M G++PN +TF
Sbjct: 253 YAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITF 312
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
+G+L CS GLV+EG F+IM+ F + P +HY C+VDL GRAGQLE + +I ++
Sbjct: 313 LGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASS 372
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEV 542
D W +LL +C++H N+ELGE A + L++++ ++G YVL+ ++Y++ +
Sbjct: 373 CHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFAS 432
Query: 543 VKKLMSKKGIKKPSGYSWIQ 562
++KL+ ++ G+SWI+
Sbjct: 433 MRKLIRSHDLQTVPGWSWIE 452
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 139/274 (50%), Gaps = 11/274 (4%)
Query: 66 SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV-LPSGF 124
S ++ +A LFD + P W LIR F S+ + + I Y RM S V P F
Sbjct: 50 SVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF-SNSSSPLNSILFYNRMLLSSVSRPDLF 108
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
TF+ L +C R+ ++ + ++HG +++SGF + IV T+L+ Y+ +G V A VFD M
Sbjct: 109 TFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEM 168
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAK 240
RD+V+W MIC ++ V + +A ++ MG +S+T +++ A +
Sbjct: 169 PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGV 228
Query: 241 ELYDVMSDKDGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQN 296
L+ + D + V A+I Y K G++ A +F+G+ +D TW +M+ Y +
Sbjct: 229 MLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVH 287
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQ 330
G+ E I F+++ + ++ + +G + C+
Sbjct: 288 GHGVEAISFFRKMVASGVRPNAITFLGLLLGCSH 321
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 246/450 (54%), Gaps = 19/450 (4%)
Query: 116 QSGV-LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCV 174
Q G+ L F+S+L C + A+ G +VH + N + + L+ +YA G
Sbjct: 84 QKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYA 143
Query: 175 CDARDVFDGMDDRD--VVAWTAMICGYAKVAMMVEARWLFDNMGE----RNSFTWTTMVA 228
A +VFD M RD AW ++I GYA++ +A L+ M E + FT+ ++
Sbjct: 144 EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 229 GYASCGDMKAAKELY-DVMSDK---DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDAS 284
G ++ + ++ D++ + D A++ Y K G++ +AR +FD IP +D
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP-HKDYV 262
Query: 285 TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI 344
+W +ML Y +G E +++F+ + Q I+ +VA+ S A++ + L +
Sbjct: 263 SWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS---SVLARVLSFKHGRQLHGWV 319
Query: 345 EEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAI 404
+ L V+NALI ++SK G + A F M RD +++A+I+A H K+ + +
Sbjct: 320 IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGL 376
Query: 405 DLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDL 464
F +M + KP+ +TF+ VL+ C+++G+VE+G R F +M+ + I+P EHYAC+V+L
Sbjct: 377 KYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNL 436
Query: 465 LGRAGQLERAYSLI-KENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGT 523
GRAG +E AYS+I +E A T WG+LL AC +HGN ++GE AA+ L E++P++
Sbjct: 437 YGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHN 496
Query: 524 YVLLANMYASQDKWVGAEVVKKLMSKKGIK 553
+ LL +Y+ + E V+++M +G++
Sbjct: 497 FELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 206/441 (46%), Gaps = 63/441 (14%)
Query: 51 HHFLSPLLLRV-LNFSSEKSNIC-------YAHKLFDTMPNCPDA-FIWTSLIRAFLSHR 101
HH + P LLR L SS+ + AH++FD M + F W SLI + +
Sbjct: 115 HHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY-AEL 173
Query: 102 AHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQ 161
+ ++ Y +M + GV P FTF VL ACG + ++ G+ +H LV+ GFG + V
Sbjct: 174 GQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVL 233
Query: 162 TALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEA----RWLFDNMGE 217
AL+ MYAK G + AR+VFD + +D V+W +M+ GY ++ EA R + N E
Sbjct: 234 NALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIE 293
Query: 218 RNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWV-----AMIAGYGKLGNVTEARR 272
+ ++++A S K ++L+ + + G+ W A+I Y K G + +A
Sbjct: 294 PDKVAISSVLARVLS---FKHGRQLHGWVI-RRGMEWELSVANALIVLYSKRGQLGQACF 349
Query: 273 LFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
+FD + + +D +W A+++ +++N G++ F+++ +A K + V +S CA
Sbjct: 350 IFDQM-LERDTVSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCAN-- 403
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMIT 392
T +E+G L ++ SK ID M Y+ M+
Sbjct: 404 --------TGMVEDG---------ERLFSLMSKEYGID-----------PKMEHYACMVN 435
Query: 393 AFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIE 452
+ G ++A + + + GL+ + +L AC G + G Q + F++E
Sbjct: 436 LYGRAGMMEEAYSMIVQ--EMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRL---FELE 490
Query: 453 PLPEH-YACIVDLLGRAGQLE 472
P EH + ++ + +A + E
Sbjct: 491 PDNEHNFELLIRIYSKAKRAE 511
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/506 (31%), Positives = 248/506 (49%), Gaps = 68/506 (13%)
Query: 60 RVLNFS-SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM--HQ 116
RVL F + S++ YA+ +F T N + F+W ++IR F S + IS + M
Sbjct: 62 RVLAFCCASPSDMNYAYLVF-TRINHKNPFVWNTIIRGF-SRSSFPEMAISIFIDMLCSS 119
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
V P T+ SV A GR+ +G+Q L GM K G
Sbjct: 120 PSVKPQRLTYPSVFKAYGRLGQARDGRQ-------------------LHGMVIKEGL--- 157
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDM 236
E +SF TM+ Y +CG +
Sbjct: 158 ----------------------------------------EDDSFIRNTMLHMYVTCGCL 177
Query: 237 KAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQN 296
A ++ M D V W +MI G+ K G + +A+ LFD +P ++ +W +M++ + +N
Sbjct: 178 IEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP-QRNGVSWNSMISGFVRN 236
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
G K+ ++MF+E+++ +K MV ++ACA L + ++I + IV
Sbjct: 237 GRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVV 296
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
ALI+M+ KCG I+ F + + +++MI A +G + A+DLF + + GL+
Sbjct: 297 TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLE 356
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYS 476
P+ V+FIGVL AC+ SG V FF++M + IEP +HY +V++LG AG LE A +
Sbjct: 357 PDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEA 416
Query: 477 LIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDK 536
LIK D W SLL+ACR GNVE+ + AA+ L ++DP+++ YVLL+N YAS
Sbjct: 417 LIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGL 476
Query: 537 WVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+ A + LM ++ ++K G S I+
Sbjct: 477 FEEAVEQRLLMKERQMEKEVGCSSIE 502
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 247/519 (47%), Gaps = 26/519 (5%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+L+ ++ + A KLFD MP D + FL +R RM SG
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMP-MRDVISQNIVFYGFLRNR-ETESGFVLLKRMLGSG-- 151
Query: 121 PSGF---TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDA 177
GF T + VL+ C + K +H + SG+ V L+ Y K GC
Sbjct: 152 --GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 178 RDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASC 233
R VFDGM R+V+ TA+I G + + + LF M NS T+ + +A +
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 234 GDMKAAKELYDVM----SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
+ ++++ ++ + + A++ Y K G++ +A +F+ D + +
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES-TTEVDEVSMTVI 328
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
L AQNG +E I+ F + QA ++I +SA + I S L +
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEID----ANVVSAVLGVSFIDNSLGLGKQLHSLVI 384
Query: 350 DRTL----IVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAID 405
R V+N LINM+SKCG++ + F M R+ ++++MI AFA HG A+
Sbjct: 385 KRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLL 465
L+ M +KP VTF+ +L+ACS GL+++G M V IEP EHY CI+D+L
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDML 504
Query: 466 GRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYV 525
GRAG L+ A S I D W +LL AC HG+ E+GE AA L + P+ S ++
Sbjct: 505 GRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHI 564
Query: 526 LLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
L+AN+Y+S+ KW K M G+ K +G S I+ E
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 127/265 (47%), Gaps = 8/265 (3%)
Query: 159 IVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER 218
+V +LL +YAK G + DA +FD M RDV++ + G+ + L M
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 219 NSFTWTTMVAGYASCGDMK---AAKELY--DVMS--DKDGVTWVAMIAGYGKLGNVTEAR 271
F T+ + C + K ++ ++S DK+ +I Y K G R
Sbjct: 151 GGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 272 RLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQL 331
+FDG+ ++ T A+++ +N ++G+ +F +R+ + V + A++AC+
Sbjct: 211 GVFDGMS-HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 332 RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMI 391
+ I + + + + L + +AL++M+SKCG+I+ AW F + D + + ++
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVIL 329
Query: 392 TAFAEHGKSQDAIDLFFRMPKEGLK 416
A++G ++AI F RM + G++
Sbjct: 330 VGLAQNGSEEEAIQFFIRMLQAGVE 354
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 193/346 (55%), Gaps = 6/346 (1%)
Query: 221 FTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVP 280
FT T++ Y+ + +A +L+D +D VT+ +I G K + AR LFD +P+
Sbjct: 153 FTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPL- 211
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL 340
+D +W ++++ YAQ + +E I++F E+ +K VA+V +SACAQ D + A+
Sbjct: 212 RDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAI 271
Query: 341 TDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKS 400
D+ + ++ L++ ++KCG ID A F + ++T++AMIT A HG
Sbjct: 272 HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNG 331
Query: 401 QDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYAC 460
+ +D F +M G+KP+ VTFI VL CS SGLV+E F M ++D+ +HY C
Sbjct: 332 ELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGC 391
Query: 461 IVDLLGRAGQLERAYSLI----KENATSADATTWGSLLAACRVHGNVELGETAARHLLEI 516
+ DLLGRAG +E A +I K+ W LL CR+HGN+E+ E AA + +
Sbjct: 392 MADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKAL 451
Query: 517 DPEDSGTYVLLANMYASQDKWVGAEVVKKLMSK-KGIKKPSGYSWI 561
PED G Y ++ MYA+ ++W V++++ + K +KK G+S +
Sbjct: 452 SPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 217/394 (55%), Gaps = 9/394 (2%)
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYAS 232
AR +F+ M + D+V + +M GY++ +E LF + E +++T+ +++ A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 233 CGDMKAAKELY----DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAA 288
++ ++L+ + D + +I Y + +V AR +FD I P + A
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC-VVCYNA 200
Query: 289 MLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC 348
M+ YA+ E + +F+E++ +K E+ ++ +S+CA L + + + + ++
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 349 CDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFF 408
+ + V+ ALI+M +KCG++D A F MR +D +SAMI A+A HGK++ ++ +F
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 409 RMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRA 468
RM E ++P+++TF+G+LNACS +G VEEG ++F M F I P +HY +VDLL RA
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLA 528
G LE AY I + S W LLAAC H N++L E + + E+D G YV+L+
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 440
Query: 529 NMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
N+YA KW + ++K+M + K G S I+
Sbjct: 441 NLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 178/383 (46%), Gaps = 47/383 (12%)
Query: 60 RVLNFSSE---KSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQ 116
+++NF +E +S++ YA LF+ M PD I+ S+ R + S + S + + +
Sbjct: 65 KLINFCTESPTESSMSYARHLFEAMSE-PDIVIFNSMARGY-SRFTNPLEVFSLFVEILE 122
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
G+LP +TF S+L AC A+ EG+Q+H ++ G N V L+ MY + V
Sbjct: 123 DGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDS 182
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYAS 232
AR VFD + + VV + AMI GYA+ EA LF M + N T ++++ A
Sbjct: 183 ARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCAL 242
Query: 233 CGDMKAAKELYDVMSDKDGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAA 288
G + K ++ +V A+I + K G++ +A +F+ + +D W+A
Sbjct: 243 LGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRY-KDTQAWSA 301
Query: 289 MLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC 348
M+ YA +G A++ + MF+ +R ++ E+ +G ++AC+ T +EEG
Sbjct: 302 MIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSH----------TGRVEEG- 350
Query: 349 CDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFF 408
M SK G + + Y +M+ + G +DA +
Sbjct: 351 -------RKYFSQMVSKFGIVP------------SIKHYGSMVDLLSRAGNLEDAYEFID 391
Query: 409 RMPKEGLKPNQVTFIGVLNACSS 431
++P + P + + +L ACSS
Sbjct: 392 KLP---ISPTPMLWRILLAACSS 411
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 230/435 (52%), Gaps = 14/435 (3%)
Query: 141 EGKQVHGRLVQSGFGGNKIVQTA-LLGMYAKSG---CVCDARDVFDGMDDRDVVAWTAMI 196
E KQVH R ++ + + +L A SG + A +F G+DD + MI
Sbjct: 45 EFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMI 104
Query: 197 CGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKEL----YDVMSD 248
GY V EA ++ M +R ++FT+ ++ ++ K++ + + +
Sbjct: 105 RGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLE 164
Query: 249 KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE 308
D ++I YG+ G + + +F+ + + A++W++M++ A G E + +F+
Sbjct: 165 ADVFVQNSLINMYGRCGEMELSSAVFEKLE-SKTAASWSSMVSARAGMGMWSECLLLFRG 223
Query: 309 V-RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCG 367
+ + +K E MV A+ ACA + + ++ + + +IV +L++M+ KCG
Sbjct: 224 MCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCG 283
Query: 368 NIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN 427
+D A F M R+ TYSAMI+ A HG+ + A+ +F +M KEGL+P+ V ++ VLN
Sbjct: 284 CLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLN 343
Query: 428 ACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADA 487
ACS SGLV+EG R F M +EP EHY C+VDLLGRAG LE A I+ +
Sbjct: 344 ACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND 403
Query: 488 TTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLM 547
W + L+ CRV N+ELG+ AA+ LL++ + G Y+L++N+Y+ W + +
Sbjct: 404 VIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEI 463
Query: 548 SKKGIKKPSGYSWIQ 562
+ KG+K+ G+S ++
Sbjct: 464 AIKGLKQTPGFSIVE 478
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 134/294 (45%), Gaps = 46/294 (15%)
Query: 68 KSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFS 127
++++ YA +F + + P F + ++IR +++ + F + Y M Q G P FT+
Sbjct: 79 ENSMNYAASIFRGIDD-PCTFDFNTMIRGYVNVMS-FEEALCFYNEMMQRGNEPDNFTYP 136
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
+L AC R+ ++ EGKQ+HG++ + G + VQ +L+ MY + G + + VF+ ++ +
Sbjct: 137 CLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESK 196
Query: 188 DVVAWTAMICGYAKVAMMVEARWLF----------------------------------- 212
+W++M+ A + M E LF
Sbjct: 197 TAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSI 256
Query: 213 -----DNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNV 267
N+ E N T++V Y CG + A ++ M ++ +T+ AMI+G G
Sbjct: 257 HGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEG 316
Query: 268 TEARRLFDGI---PVPQDASTWAAMLACYAQNGYAKEGIEMFKE-VRQAKIKIT 317
A R+F + + D + ++L + +G KEG +F E +++ K++ T
Sbjct: 317 ESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPT 370
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 255/529 (48%), Gaps = 31/529 (5%)
Query: 62 LNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLP 121
L+ ++ N+ A LFD N + + ++I + S H + + R+ SG+
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENL-NRQSYNAMITGY-SQEEHGFKALLLFHRLMSSGLGF 380
Query: 122 SGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVF 181
+ S V AC V + EG Q++G ++S + V A + MY K + +A VF
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 182 DGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMK 237
D M RD V+W A+I + + E +LF +M E + FT+ +++ + G +
Sbjct: 441 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLG 499
Query: 238 AAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDAS--------- 284
E++ + + ++I Y K G + EA ++ + S
Sbjct: 500 YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKM 559
Query: 285 ----------TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDI 334
+W ++++ Y +++ +F + + I + + CA L
Sbjct: 560 HNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASA 619
Query: 335 RMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAF 394
+ + + + + + + L++M+SKCG++ + F RD T++AMI +
Sbjct: 620 GLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGY 679
Query: 395 AEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPL 454
A HGK ++AI LF RM E +KPN VTFI +L AC+ GL+++G +F +M + ++P
Sbjct: 680 AHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQ 739
Query: 455 PEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVH-GNVELGETAARHL 513
HY+ +VD+LG++G+++RA LI+E AD W +LL C +H NVE+ E A L
Sbjct: 740 LPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAAL 799
Query: 514 LEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
L +DP+DS Y LL+N+YA W +++ M +KK G SW++
Sbjct: 800 LRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVE 848
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 187/417 (44%), Gaps = 44/417 (10%)
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
FS V C + A+ GKQ H ++ SGF V LL +Y S A VFD M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYD 244
RDVV+W MI GY+K M +A F+ M R+ +W +M++GY G+ + E++
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 245 VMS---------------------------------------DKDGVTWVAMIAGYGKLG 265
M D D V A++ Y K
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 266 NVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAI 325
E+ R+F GIP +++ +W+A++A QN ++ FKE+++ +++ +
Sbjct: 230 RFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 326 SACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMY 385
+CA L ++R+ L H + IV A ++M++KC N+ A F +
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 386 TYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQI- 444
+Y+AMIT +++ A+ LF R+ GL ++++ GV AC+ + EG + + +
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 445 MTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
+ ++ + A +D+ G+ L A+ + E DA +W +++AA +G
Sbjct: 409 IKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDE-MRRRDAVSWNAIIAAHEQNG 462
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 193/383 (50%), Gaps = 11/383 (2%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV 119
+++N S+ +++ A+ F+ MP D W S++ +L + + I + M + G+
Sbjct: 119 KMINGYSKSNDMFKANSFFNMMP-VRDVVSWNSMLSGYLQNGESLK-SIEVFVDMGREGI 176
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
G TF+ +L C + G Q+HG +V+ G + + +ALL MYAK ++
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNS----FTWTTMVAGYASCGD 235
VF G+ +++ V+W+A+I G + ++ A F M + N+ + +++ A+ +
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 236 MKAAKELYD--VMSD--KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
++ +L+ + SD DG+ A + Y K N+ +A+ LFD + ++ AM+
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-SENLNRQSYNAMIT 355
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDR 351
Y+Q + + + +F + + + E+++ G ACA ++ + + +
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 415
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
+ V+NA I+M+ KC + A+R F MR RD +++A+I A ++GK + + LF M
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 412 KEGLKPNQVTFIGVLNACSSSGL 434
+ ++P++ TF +L AC+ L
Sbjct: 476 RSRIEPDEFTFGSILKACTGGSL 498
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 253/463 (54%), Gaps = 16/463 (3%)
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK 170
+ +M ++ + P+ TF SV+ +C AM G QVHG +++G+ +V A + MY+
Sbjct: 279 FRKMLEASLRPTDLTFVSVMGSCS-CAAM--GHQVHGLAIKTGYEKYTLVSNATMTMYSS 335
Query: 171 SGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTM 226
A VF+ ++++D+V W MI Y + + A ++ M + + FT+ ++
Sbjct: 336 FEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSL 395
Query: 227 VAGYASCG--DMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDAS 284
+A +M A + +S K ++ A+I+ Y K G + +A LF+ + ++
Sbjct: 396 LATSLDLDVLEMVQACIIKFGLSSKIEIS-NALISAYSKNGQIEKADLLFER-SLRKNLI 453
Query: 285 TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVA--MVGAISACAQLRDIRMSNALTD 342
+W A+++ + NG+ EG+E F + +++++I A + +S C + + +
Sbjct: 454 SWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHA 513
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQD 402
++ + ++ NALINM+S+CG I + F+ M +D+ +++++I+A++ HG+ ++
Sbjct: 514 YVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 403 AIDLFFRMPKEG-LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI 461
A++ + M EG + P+ TF VL+ACS +GLVEEG F M + +H++C+
Sbjct: 574 AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCL 633
Query: 462 VDLLGRAGQLERAYSLIK--ENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPE 519
VDLLGRAG L+ A SL+K E + W +L +AC HG+++LG+ A+ L+E + +
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKD 693
Query: 520 DSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
D YV L+N+YA W AE ++ ++ G K G SW++
Sbjct: 694 DPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMR 736
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 190/446 (42%), Gaps = 62/446 (13%)
Query: 98 LSHRAHFRHCISTYARMHQSGVL-PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGG 156
L+ R+ + +A +H+ L P ++ S + + + G QVH ++SG
Sbjct: 31 LTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLC 90
Query: 157 NKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG 216
+ V LL +Y + G + + FD +D+ DV +WT ++ K+ + A +FD M
Sbjct: 91 HSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMP 150
Query: 217 ERNSFT-WTTMVAGYASCGDMKAAKELYDVM------SDKDGVTWVAMIAGYGKLG---- 265
ER+ W M+ G G + + EL+ M DK G + + YG L
Sbjct: 151 ERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQ 210
Query: 266 ----------------------------NVTEARRLFDGIPVP-QDASTWAAMLACYAQN 296
V +A +F+ V +D T+ ++ A
Sbjct: 211 VHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA-- 268
Query: 297 GYAK-EGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRT--- 352
G+ + E + +F+++ +A ++ T++ V + +C S A H G +T
Sbjct: 269 GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC--------SCAAMGHQVHGLAIKTGYE 320
Query: 353 --LIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
+VSNA + M+S + A + F ++ +D+ T++ MI+++ + + A+ ++ RM
Sbjct: 321 KYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM 380
Query: 411 PKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQ 470
G+KP++ TF +L ++E Q F + E ++ + GQ
Sbjct: 381 HIIGVKPDEFTFGSLLATSLDLDVLE----MVQACIIKFGLSSKIEISNALISAYSKNGQ 436
Query: 471 LERAYSLIKENATSADATTWGSLLAA 496
+E+A L+ E + + +W ++++
Sbjct: 437 IEKA-DLLFERSLRKNLISWNAIISG 461
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 150/319 (47%), Gaps = 21/319 (6%)
Query: 219 NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIP 278
+S T+++ Y G++ + K+ +D + + D +W +++ KLG++ A +FD +P
Sbjct: 91 HSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMP 150
Query: 279 VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISAC--AQLRDIRM 336
D + W AM+ ++GY + +E+F+E+ + ++ + +S C L +
Sbjct: 151 ERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQ 210
Query: 337 SNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF--STMRCRDMYTYSAMITAF 394
++L I+ G + +V NALI M+ C + A F + + RD T++ +I
Sbjct: 211 VHSLV--IKAGFFIASSVV-NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGL 267
Query: 395 AEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPL 454
A K +++ +F +M + L+P +TF+ V+ +CS + + + I TG +
Sbjct: 268 AGF-KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQ-VHGLAIKTGYEKYTLV 325
Query: 455 PEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAAR--- 511
+ G + + ++E D TW +++++ + +LG++A
Sbjct: 326 SNATMTMYSSFEDFGAAHKVFESLEEK----DLVTWNTMISS---YNQAKLGKSAMSVYK 378
Query: 512 --HLLEIDPEDSGTYVLLA 528
H++ + P++ LLA
Sbjct: 379 RMHIIGVKPDEFTFGSLLA 397
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 256/551 (46%), Gaps = 58/551 (10%)
Query: 62 LNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLP 121
N E I ++ +P W LI +++ ++ F+ +S Y RM G+
Sbjct: 131 FNLLDEAQTITENSEILHPLP-------WNVLIGSYIRNK-RFQESVSVYKRMMSKGIRA 182
Query: 122 SGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVF 181
FT+ SV+ AC + G+ VHG + S N V AL+ MY + G V AR +F
Sbjct: 183 DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 182 DGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTT------------ 225
D M +RD V+W A+I Y + EA L D M E + TW T
Sbjct: 243 DRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 226 --------------------MVAGYASC---GDMKAAKELYDVM-------SDKDGVTWV 255
M+ G +C G +K K + ++ D D V
Sbjct: 303 GALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR-N 361
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
++I Y + ++ A +F + STW ++++ +A N ++E + KE+ +
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEA-NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHI-EEGCCDRTLIVSNALINMHSKCGNIDLAWR 374
+ + + A++ +++ +I LI+ N+L++M++K G I A R
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 375 EFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGL 434
F +MR RD TY+++I + GK + A+ F M + G+KP+ VT + VL+ACS S L
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 435 VEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLL 494
V EG F M VF I EHY+C+VDL RAG L++A + + +LL
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLL 600
Query: 495 AACRVHGNVELGETAA-RHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIK 553
AC +HGN +GE AA + LLE PE G Y+LLA+MYA W VK L+S G++
Sbjct: 601 KACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQ 660
Query: 554 KPSGYSWIQRE 564
K ++ ++ +
Sbjct: 661 KAHEFALMETD 671
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 197/472 (41%), Gaps = 65/472 (13%)
Query: 104 FRHCIS---------TYARM-HQSG----VLPSGFTFSSVLNACGRVPAMVEGKQVHGRL 149
FRHCIS T++ + +QSG VL ++ +S+L+ C V G+Q+H
Sbjct: 53 FRHCISHGQLYEAFRTFSLLRYQSGSHEFVL---YSSASLLSTCVGFNEFVPGQQLHAHC 109
Query: 150 VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEAR 209
+ SG + ++ L+ Y+ + +A+ + + + + W +I Y + E+
Sbjct: 110 ISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESV 169
Query: 210 WLFDNMGER----NSFTWTT-----------------------------------MVAGY 230
++ M + + FT+ + +++ Y
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 231 ASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGI---PVPQDASTWA 287
G + A+ L+D MS++D V+W A+I Y + EA +L D + V TW
Sbjct: 230 KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWN 289
Query: 288 AMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEG 347
+ + G + +R ++I VAM+ + AC+ + ++ +
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 348 CCDRTLI--VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAID 405
C I V N+LI M+S+C ++ A+ F + + T++++I+ FA + +S++
Sbjct: 350 CSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSF 409
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLL 465
L M G PN +T +L + G ++ G F + + + +VD+
Sbjct: 410 LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMY 469
Query: 466 GRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEID 517
++G++ A + ++ D T+ SL+ +G + GE A ++D
Sbjct: 470 AKSGEIIAAKRVF-DSMRKRDKVTYTSLIDG---YGRLGKGEVALAWFKDMD 517
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 256/551 (46%), Gaps = 58/551 (10%)
Query: 62 LNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLP 121
N E I ++ +P W LI +++ ++ F+ +S Y RM G+
Sbjct: 131 FNLLDEAQTITENSEILHPLP-------WNVLIGSYIRNK-RFQESVSVYKRMMSKGIRA 182
Query: 122 SGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVF 181
FT+ SV+ AC + G+ VHG + S N V AL+ MY + G V AR +F
Sbjct: 183 DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 182 DGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTT------------ 225
D M +RD V+W A+I Y + EA L D M E + TW T
Sbjct: 243 DRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 226 --------------------MVAGYASC---GDMKAAKELYDVM-------SDKDGVTWV 255
M+ G +C G +K K + ++ D D V
Sbjct: 303 GALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR-N 361
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
++I Y + ++ A +F + STW ++++ +A N ++E + KE+ +
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEA-NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHI-EEGCCDRTLIVSNALINMHSKCGNIDLAWR 374
+ + + A++ +++ +I LI+ N+L++M++K G I A R
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 375 EFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGL 434
F +MR RD TY+++I + GK + A+ F M + G+KP+ VT + VL+ACS S L
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 435 VEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLL 494
V EG F M VF I EHY+C+VDL RAG L++A + + +LL
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLL 600
Query: 495 AACRVHGNVELGETAA-RHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIK 553
AC +HGN +GE AA + LLE PE G Y+LLA+MYA W VK L+S G++
Sbjct: 601 KACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQ 660
Query: 554 KPSGYSWIQRE 564
K ++ ++ +
Sbjct: 661 KAHEFALMETD 671
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 197/472 (41%), Gaps = 65/472 (13%)
Query: 104 FRHCIS---------TYARM-HQSG----VLPSGFTFSSVLNACGRVPAMVEGKQVHGRL 149
FRHCIS T++ + +QSG VL ++ +S+L+ C V G+Q+H
Sbjct: 53 FRHCISHGQLYEAFRTFSLLRYQSGSHEFVL---YSSASLLSTCVGFNEFVPGQQLHAHC 109
Query: 150 VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEAR 209
+ SG + ++ L+ Y+ + +A+ + + + + W +I Y + E+
Sbjct: 110 ISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESV 169
Query: 210 WLFDNMGER----NSFTWTT-----------------------------------MVAGY 230
++ M + + FT+ + +++ Y
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 231 ASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGI---PVPQDASTWA 287
G + A+ L+D MS++D V+W A+I Y + EA +L D + V TW
Sbjct: 230 KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWN 289
Query: 288 AMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEG 347
+ + G + +R ++I VAM+ + AC+ + ++ +
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 348 CCDRTLI--VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAID 405
C I V N+LI M+S+C ++ A+ F + + T++++I+ FA + +S++
Sbjct: 350 CSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSF 409
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLL 465
L M G PN +T +L + G ++ G F + + + +VD+
Sbjct: 410 LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMY 469
Query: 466 GRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEID 517
++G++ A + ++ D T+ SL+ +G + GE A ++D
Sbjct: 470 AKSGEIIAAKRVF-DSMRKRDKVTYTSLIDG---YGRLGKGEVALAWFKDMD 517
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 246/449 (54%), Gaps = 13/449 (2%)
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQS-GFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
++ +L+AC ++ G ++ ++ + N + + L+ +++ + AR +FD +
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDV 193
Query: 185 DDRDVV---AWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMK 237
D ++ W AM GY++ +A ++ +M E +F+ + + D++
Sbjct: 194 TDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLR 253
Query: 238 AAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACY 293
+ ++ + + D V + ++ Y + G +AR++FDG+ ++ TW ++++
Sbjct: 254 VGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS-ERNVVTWNSLISVL 312
Query: 294 AQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTL 353
++ E +F+++++ I + + + AC+++ + + I + +
Sbjct: 313 SKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDV 372
Query: 354 IVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE 413
+ N+L++M+ KCG ++ + R F M +D+ +++ M+ +A +G ++ I+LF M +
Sbjct: 373 PLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIES 432
Query: 414 GLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLER 473
G+ P+ +TF+ +L+ CS +GL E G F+ M F + P EHYAC+VD+LGRAG+++
Sbjct: 433 GVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKE 492
Query: 474 AYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYAS 533
A +I+ A+ WGSLL +CR+HGNV +GE AA+ L ++P + G YV+++N+YA
Sbjct: 493 AVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYAD 552
Query: 534 QDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
W + ++++M ++G+KK +G SW+Q
Sbjct: 553 AKMWDNVDKIREMMKQRGVKKEAGCSWVQ 581
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 198/447 (44%), Gaps = 56/447 (12%)
Query: 57 LLLRVLNFSSEKSNICYAHKLFDTMPNCP--DAFIWTSLIRAFLSHRAHFRHCISTYARM 114
LL +++ S + A K+FD + + +W ++ + S R + Y M
Sbjct: 169 LLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGY-SRNGSPRDALIVYVDM 227
Query: 115 HQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCV 174
S + P F+ S L AC + + G+ +H ++V+ +++V LL +Y +SG
Sbjct: 228 LCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLF 287
Query: 175 CDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERN-SFTWTTMVAGYASC 233
DAR VFDGM +R+VV W ++I +K + E LF M E F+W T+ +C
Sbjct: 288 DDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPAC 347
Query: 234 GDMKA---AKELY-DVMSDK---DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTW 286
+ A KE++ ++ K D +++ YGK G V +RR+FD + + +D ++W
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFD-VMLTKDLASW 406
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEE 346
ML CYA NG +E I +F+ + ++ + + V +S C+ LT++
Sbjct: 407 NIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSD-------TGLTEY--- 456
Query: 347 GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRD-MYTYSAMITAFAEHGKSQDAID 405
+ L R + R + Y+ ++ GK ++A+
Sbjct: 457 ---------------------GLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTG-VFDIEPL-PEHYACIVD 463
+ MP KP+ + +LN+C G V G +I +F +EP P +Y + +
Sbjct: 496 VIETMP---FKPSASIWGSLLNSCRLHGNVSVG----EIAAKELFVLEPHNPGNYVMVSN 548
Query: 464 LLGRA---GQLERAYSLIKENATSADA 487
+ A +++ ++K+ +A
Sbjct: 549 IYADAKMWDNVDKIREMMKQRGVKKEA 575
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 249/500 (49%), Gaps = 50/500 (10%)
Query: 77 LFDTMPNC---PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
L D M C PD W SL+ + S + + I+ RM +G+ PS + SS+L A
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYAS-KGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ GK +HG ++++ + V+T L+ MY K+G
Sbjct: 236 AEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG--------------------- 274
Query: 194 AMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK---- 249
+ AR +FD M +N W ++V+G + +K A+ L M +
Sbjct: 275 ----------YLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMF 306
D +TW ++ +GY LG +A + + V + +W A+ + ++NG + +++F
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 307 KEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLI----VSNALINM 362
++++ + M + L + + C + LI V+ AL++M
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGK----EVHGFCLRKNLICDAYVATALVDM 440
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+ K G++ A F ++ + + +++ M+ +A G+ ++ I F M + G++P+ +TF
Sbjct: 441 YGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITF 500
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
VL+ C +SGLV+EG ++F +M + I P EH +C+VDLLGR+G L+ A+ I+ +
Sbjct: 501 TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS 560
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEV 542
DAT WG+ L++C++H ++EL E A + L ++P +S Y+++ N+Y++ ++W E
Sbjct: 561 LKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVER 620
Query: 543 VKKLMSKKGIKKPSGYSWIQ 562
++ LM ++ +SWIQ
Sbjct: 621 IRNLMRNNRVRVQDLWSWIQ 640
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 205/484 (42%), Gaps = 58/484 (11%)
Query: 73 YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNA 132
+A+KLFD MP D W ++ L ++ + + M SG T +L
Sbjct: 41 FANKLFDEMPK-RDDLAWNEIVMVNL-RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
C EG+Q+HG +++ G N + +L+ MY+++G + +R VF+ M DR++ +W
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW 158
Query: 193 TAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVM-- 246
+++ Y K+ + +A L D M + + TW ++++GYAS G K A + M
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 247 -------SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYA 299
S + G+ KLG L + + D ++ Y + GY
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRN--QLWYDVYVETTLIDMYIKTGYL 276
Query: 300 KEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNAL 359
+F ++ AK + ++V +S L+D + AL +E+ I N+L
Sbjct: 277 PYARMVF-DMMDAKNIVAWNSLVSGLSYACLLKD---AEALMIRMEKEGIKPDAITWNSL 332
Query: 360 INMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
+ ++ G + A M+ + ++ +++A+ + +++G ++A+ +F +M +EG+
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Query: 416 KPNQVT------FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDL----- 464
PN T +G L+ S V C ++ + L + Y DL
Sbjct: 393 GPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIE 452
Query: 465 ----------------------LGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGN 502
GR + A+S++ E DA T+ S+L+ C+ G
Sbjct: 453 IFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGL 512
Query: 503 VELG 506
V+ G
Sbjct: 513 VQEG 516
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 173/404 (42%), Gaps = 76/404 (18%)
Query: 142 GKQVHGRLVQSGFGGNKI-VQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYA 200
G +HG L++ G + V +A +G Y + + A +FD M RD +AW ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 201 KVAMMVEARWLFDNMG---------------------------------------ERNSF 221
+ +A LF M E N
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 222 TWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPV-- 279
+++ Y+ G ++ ++++++ M D++ +W ++++ Y KLG V +A L D + +
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 280 -PQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSN 338
D TW ++L+ YA G +K+ I + K ++ A +K + ++ + A A+ +++
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 339 ALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHG 398
A+ +I + V LI+M+ K G + A F M +++ ++++++ +
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 399 KSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHY 458
+DA L RM KEG+KP+ +T+ + + ++ G E+
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKA-------------------- 345
Query: 459 ACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGN 502
+D++G+ +KE + + +W ++ + C +GN
Sbjct: 346 ---LDVIGK----------MKEKGVAPNVVSWTAIFSGCSKNGN 376
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 246/444 (55%), Gaps = 21/444 (4%)
Query: 137 PAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMI 196
P + + +QVH L+ +G+G ++ + T L+ + + + +F + D + ++I
Sbjct: 20 PRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVI 79
Query: 197 CGYAKVAMMVEA-----RWLFDNMGERNSFTWTTMVAGYASCGDMKAAK-----ELYDVM 246
+K+ + + R L N+ N +T+T+++ SC D+ A + + V+
Sbjct: 80 KSTSKLRLPLHCVAYYRRMLSSNVSPSN-YTFTSVIK---SCADLSALRIGKGVHCHAVV 135
Query: 247 SDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
S T+V A++ Y K G++ AR++FD +P + W ++++ + QNG A E I+
Sbjct: 136 SGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP-EKSIVAWNSLVSGFEQNGLADEAIQ 194
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+F ++R++ + V +SACAQ + + + + +I D + + ALIN++S
Sbjct: 195 VFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYS 254
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE-GLKPNQVTFI 423
+CG++ A F M+ ++ ++AMI+A+ HG Q A++LF +M + G PN VTF+
Sbjct: 255 RCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFV 314
Query: 424 GVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT 483
VL+AC+ +GLVEEG ++ MT + + P EH+ C+VD+LGRAG L+ AY I +
Sbjct: 315 AVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDA 374
Query: 484 SADATT---WGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGA 540
+ AT W ++L AC++H N +LG A+ L+ ++P++ G +V+L+N+YA K
Sbjct: 375 TGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEV 434
Query: 541 EVVKKLMSKKGIKKPSGYSWIQRE 564
++ M + ++K GYS I+ E
Sbjct: 435 SHIRDGMMRNNLRKQVGYSVIEVE 458
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 187/384 (48%), Gaps = 33/384 (8%)
Query: 57 LLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQ 116
LL +++ + I Y H LF ++P PD F++ S+I++ R HC++ Y RM
Sbjct: 43 LLTKLITLACSARAIAYTHLLFLSVP-LPDDFLFNSVIKSTSKLRLPL-HCVAYYRRMLS 100
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
S V PS +TF+SV+ +C + A+ GK VH V SGFG + VQ AL+ Y+K G +
Sbjct: 101 SNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEG 160
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYAS 232
AR VFD M ++ +VAW +++ G+ + + EA +F M E +S T+ ++++ A
Sbjct: 161 ARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQ 220
Query: 233 CGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAA 288
G + ++ + D + A+I Y + G+V +AR +FD + + + W A
Sbjct: 221 TGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTA 279
Query: 289 MLACYAQNGYAKEGIEMFKEVRQAKIKI-TEVAMVGAISACAQL------RDI--RMSNA 339
M++ Y +GY ++ +E+F ++ I V V +SACA R + RM+ +
Sbjct: 280 MISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Query: 340 --LTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEH 397
L +E C +++M + G +D A++ + T A+ TA
Sbjct: 340 YRLIPGVEHHVC---------MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
Query: 398 GKSQDAIDLFFRMPKE--GLKPNQ 419
K DL + K L+P+
Sbjct: 391 CKMHRNYDLGVEIAKRLIALEPDN 414
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 222/459 (48%), Gaps = 19/459 (4%)
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
PS LN + ++ KQ+H +++ G + + LL + + + C+ A +
Sbjct: 4 PSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSI 62
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFD----------NMGERNSFTWTTMV--- 227
+ + V + +I + F N N FT+ ++
Sbjct: 63 LRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKAS 122
Query: 228 ---AGYASCGDMKAAKEL-YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDA 283
A + G A L + + D A++ Y G + EAR LF+ I P D
Sbjct: 123 GFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREP-DL 181
Query: 284 STWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH 343
+TW +LA YA + E+ + +++ E+++V I +CA L + +
Sbjct: 182 ATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVY 241
Query: 344 IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDA 403
+ + V +LI+++SKCG + A + F M RD+ Y+AMI A HG Q+
Sbjct: 242 VLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEG 301
Query: 404 IDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVD 463
I+L+ + +GL P+ TF+ ++ACS SGLV+EG + F M V+ IEP EHY C+VD
Sbjct: 302 IELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVD 361
Query: 464 LLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGT 523
LLGR+G+LE A IK+ +AT W S L + + HG+ E GE A +HLL ++ E+SG
Sbjct: 362 LLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGN 421
Query: 524 YVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
YVLL+N+YA ++W E ++LM + K G S +
Sbjct: 422 YVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRA--HFRHCISTYARMHQSGVLPSGFTFSSVLN 131
A LF+ + PD W +L+ A+ + + + RM V P+ + +++
Sbjct: 169 ARSLFERIRE-PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIK 224
Query: 132 ACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVA 191
+C + V G H ++++ N+ V T+L+ +Y+K GC+ AR VFD M RDV
Sbjct: 225 SCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSC 284
Query: 192 WTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS 247
+ AMI G A E L+ ++ + +S T+ ++ + G + ++++ M
Sbjct: 285 YNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMK 344
Query: 248 DKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
G+ + ++ G+ G + EA +PV +A+ W + L +G + G
Sbjct: 345 AVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERG 404
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 263/562 (46%), Gaps = 77/562 (13%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A KLFD MP +T+LI+ + + + + + M G++ + T ++V++AC
Sbjct: 126 ALKLFDVMPE-RSCVSYTTLIKGY-AQNNQWSEAMELFREMRNLGIMLNEVTLATVISAC 183
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR------ 187
+ + + + + ++ G V T LL MY C+ DAR +FD M +R
Sbjct: 184 SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWN 243
Query: 188 -------------------------DVVAWTAMICGYAKVAMMVEARWLFDNM---GERN 219
D+V+W MI G + + EA + M G +
Sbjct: 244 VMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKP 303
Query: 220 S------------------------------------FTWTTMVAGYASCGDMKAAKELY 243
S F T++ YA D+K A + +
Sbjct: 304 SEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQF 363
Query: 244 DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGI 303
+ + A+IAG+ K G V +AR +FD +D +W AM++ YAQ+ + +
Sbjct: 364 EASVKDHIASRNALIAGFVKNGMVEQAREVFDQTH-DKDIFSWNAMISGYAQSLSPQLAL 422
Query: 304 EMFKE-VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+F+E + +++K + MV SA + L + D++ ++ A+I+M
Sbjct: 423 HLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDM 482
Query: 363 HSKCGNIDLAWREF---STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
++KCG+I+ A F + + ++A+I A HG ++ A+DL+ + +KPN
Sbjct: 483 YAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNS 542
Query: 420 VTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIK 479
+TF+GVL+AC +GLVE G +F+ M IEP +HY C+VDLLG+AG+LE A +IK
Sbjct: 543 ITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIK 602
Query: 480 ENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVG 539
+ AD WG LL+A R HGNVE+ E AA L IDP G V+L+N+YA +W
Sbjct: 603 KMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWED 662
Query: 540 AEVVKKLMSKKGIKKPSGYSWI 561
+V++ M + ++ +S +
Sbjct: 663 VALVREEMRTRDVEWSRAFSGV 684
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 214/527 (40%), Gaps = 117/527 (22%)
Query: 93 LIRAFLSHRAHF----RHCISTYARMHQSGVLPSGFT---FSSVLNACGRVPAMVEGKQV 145
LIR F S R C S +R H S T S L +C + G+Q+
Sbjct: 4 LIRFFRSRRCWVISLQARCFSAPSRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQI 63
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
H R+++SG N + ++L MYAK + DA VF D ++ M+ GY + +
Sbjct: 64 HCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRL 123
Query: 206 VEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSD----KDGVTWVAMIAGY 261
+A LFD M ER+ ++TT++ GYA A EL+ M + + VT +I+
Sbjct: 124 WDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISAC 183
Query: 262 GKLGNV-----------------------------------TEARRLFDGIPVPQDASTW 286
LG + +AR+LFD +P ++ TW
Sbjct: 184 SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP-ERNLVTW 242
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKI-------------------------------K 315
ML Y++ G ++ E+F ++ + I K
Sbjct: 243 NVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMK 302
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDH---IEEG--CCD---RTLI------------- 354
+EV MV +SA A R + S L H ++ G C D T+I
Sbjct: 303 PSEVMMVDLLSASA--RSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLAL 360
Query: 355 ------------VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQD 402
NALI K G ++ A F +D+++++AMI+ +A+ Q
Sbjct: 361 QQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL 420
Query: 403 AIDLFFRM-PKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI 461
A+ LF M +KP+ +T + V +A SS G +EEG R + I P A I
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN-FSTIPPNDNLTAAI 479
Query: 462 VDLLGRAGQLERAYSLIKE--NATSADATTWGSLLAACRVHGNVELG 506
+D+ + G +E A ++ + N +S+ + W +++ HG+ +L
Sbjct: 480 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 170/424 (40%), Gaps = 89/424 (20%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+LN S+ I A +LFD + D W ++I L + + Y M + G+
Sbjct: 245 MLNGYSKAGLIEQAEELFDQITE-KDIVSWGTMIDGCL-RKNQLDEALVYYTEMLRCGMK 302
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
PS +L+A R +G Q+HG +V+ GF +Q ++ YA S + A
Sbjct: 303 PSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQ 362
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAK 240
F+ + + A+I G+ K M+ +AR +FD +++ F+W M++GYA + A
Sbjct: 363 FEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLAL 422
Query: 241 ELYDVM-----SDKDGVTWVAMIAGYGKLGNVTEARRL-----FDGIPVPQD-------- 282
L+ M D +T V++ + LG++ E +R F IP P D
Sbjct: 423 HLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIP-PNDNLTAAIID 481
Query: 283 -------------------------ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKIT 317
S W A++ A +G+AK ++++ +++ IK
Sbjct: 482 MYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPN 541
Query: 318 EVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFS 377
+ VG +SAC G ++L F
Sbjct: 542 SITFVGVLSACCH-----------------------------------AGLVELGKTYFE 566
Query: 378 TMRCR-----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS 432
+M+ D+ Y M+ + G+ ++A ++ +MP +K + + + +L+A +
Sbjct: 567 SMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP---VKADVMIWGMLLSASRTH 623
Query: 433 GLVE 436
G VE
Sbjct: 624 GNVE 627
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 268/581 (46%), Gaps = 94/581 (16%)
Query: 66 SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFT 125
++ I A ++FD MP D W +++ ++ H + I+ + ++ S P ++
Sbjct: 15 AKSGRIASARQVFDGMPEL-DTVAWNTMLTSYSRLGLH-QEAIALFTQLRFSDAKPDDYS 72
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG-----------CV 174
F+++L+ C + + G+++ +++SGF + V +L+ MY K
Sbjct: 73 FTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMC 132
Query: 175 CDAR----------------------DVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLF 212
CD+R DVF M R AW MI G+A + LF
Sbjct: 133 CDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLF 192
Query: 213 DNMGER----NSFTWTTMVA----------------------GYASCGDMK-AAKELYDV 245
M E + +T+++++ G++S + K + Y
Sbjct: 193 KEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTK 252
Query: 246 MSDKDG-------------VTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLAC 292
+ +D V+W ++I K+G +A +F P ++ TW M+
Sbjct: 253 LGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAP-EKNIVTWTTMITG 311
Query: 293 YAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH--IEEGCCD 350
Y +NG ++ + F E+ ++ + A + AC+ L AL H + GC
Sbjct: 312 YGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGL-------ALLGHGKMIHGCLI 364
Query: 351 RT-----LIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAID 405
V NAL+N+++KCG+I A R F + +D+ +++ M+ AF HG + A+
Sbjct: 365 HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALK 424
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLL 465
L+ M G+KP+ VTFIG+L CS SGLVEEGC F+ M + I +H C++D+
Sbjct: 425 LYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMF 484
Query: 466 GRAGQLERAYSLIKENAT----SADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDS 521
GR G L A L ++ S++ ++W +LL AC H + ELG ++ L +P +
Sbjct: 485 GRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEE 544
Query: 522 GTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
++VLL+N+Y S +W E V++ M ++G+KK G SWI+
Sbjct: 545 MSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIE 585
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 176/426 (41%), Gaps = 102/426 (23%)
Query: 162 TALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GE 217
T+ + AKSG + AR VFDGM + D VAW M+ Y+++ + EA LF + +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 218 RNSFTWTTMVAGYASCGDMKAAK----------------------ELYDVMSD------- 248
+ +++T +++ AS G++K + ++Y SD
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 249 --------KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAK 300
++ VTW +++ Y A +F +P + A W M++ +A G +
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMP-KRVAFAWNIMISGHAHCGKLE 186
Query: 301 EGIEMFKEVRQAKIKITEVAMVGAISACA----------QLRDIRMSNALTDHIEEGCCD 350
+ +FKE+ +++ K ++AC+ + + + N + +E
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE----- 241
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRC----------------------------- 381
N++++ ++K G+ D A RE ++
Sbjct: 242 ----AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLA 297
Query: 382 --RDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGC 439
+++ T++ MIT + +G + A+ F M K G+ + + VL+ACS L+ G
Sbjct: 298 PEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG- 356
Query: 440 RFFQIMTGVFDIEPLPEHYA----CIVDLLGRAGQLERAYSLIKENATSADATTWGSLLA 495
+++ G I + YA +V+L + G ++ A + A + D +W ++L
Sbjct: 357 ---KMIHGCL-IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLF 411
Query: 496 ACRVHG 501
A VHG
Sbjct: 412 AFGVHG 417
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 36/214 (16%)
Query: 252 VTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQ 311
V + IA K G + AR++FDG+P D W ML Y++ G +E I +F ++R
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMP-ELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 312 AKIKITEVAMVGAISACAQLRDIRMSNALTDH-IEEGCCDRTLIVSNALINMHSKCGNID 370
+ K + + +S CA L +++ + I G C +L V+N+LI+M+ KC +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFC-ASLPVNNSLIDMYGKCSDTL 122
Query: 371 LAWREFSTMRC--RDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE--------------- 413
A + F M C R+ T+ +++ A+ + + A+D+F MPK
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 414 ----------------GLKPNQVTFIGVLNACSS 431
KP+ TF ++NACS+
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSA 216
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 259/511 (50%), Gaps = 12/511 (2%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+LN + ++ A LFD M D W ++I + S + + RM G+
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQ-RDMVSWNTMISGYAS-VGNMSEILKLLYRMRGDGLR 242
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P TF + L+ G + + G+ +H ++V++GF + ++TAL+ MY K G + V
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGY-ASCG----- 234
+ + ++DVV WT MI G ++ +A +F M + S + +A ASC
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 235 DMKAAKELYDVMSDK--DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLAC 292
D+ A+ Y + D ++I Y K G++ ++ +F+ + +D +W A+++
Sbjct: 363 DLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
Query: 293 YAQNGYAKEGIEMFKEVRQAKIK-ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDR 351
YAQN + + +F+E++ ++ + +V + AC+ + + + +
Sbjct: 422 YAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRP 481
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
+V AL++M+SKCG ++ A R F ++ +D+ ++ +I + HGK A++++
Sbjct: 482 CSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFL 541
Query: 412 KEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQL 471
G++PN V F+ VL++CS +G+V++G + F M F +EP EH AC+VDLL RA ++
Sbjct: 542 HSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRI 601
Query: 472 ERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMY 531
E A+ KEN T G +L ACR +G E+ + ++E+ P D+G YV L + +
Sbjct: 602 EDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSF 661
Query: 532 ASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
A+ +W M G+KK G+S I+
Sbjct: 662 AAMKRWDDVSESWNQMRSLGLKKLPGWSKIE 692
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 198/415 (47%), Gaps = 15/415 (3%)
Query: 90 WTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRL 149
+ S I SH H + +ST++ M + +LP FTF S+L AC + + G +H ++
Sbjct: 14 FNSHINHLSSHGDH-KQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 150 VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEAR 209
+ +GF + + ++L+ +YAK G + AR VF+ M +RDVV WTAMI Y++ ++ EA
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 210 WLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVMS-DKDGVTWVAMIAGYGKL 264
L + M + T M++G ++ + + D D +M+ Y K
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKC 192
Query: 265 GNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGA 324
+V +A+ LFD + +D +W M++ YA G E +++ +R ++ + +
Sbjct: 193 DHVGDAKDLFDQME-QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGAS 251
Query: 325 ISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDM 384
+S + D+ M L I + D + + ALI M+ KCG + ++R T+ +D+
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDV 311
Query: 385 YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRF--F 442
++ MI+ G+++ A+ +F M + G + V+ +C+ G + G +
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY 371
Query: 443 QIMTG-VFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAA 496
+ G D L ++ + + G L+++ +I E D +W ++++
Sbjct: 372 VLRHGYTLDTPALNS----LITMYAKCGHLDKSL-VIFERMNERDLVSWNAIISG 421
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 194/348 (55%), Gaps = 7/348 (2%)
Query: 219 NSFTWTTMVAGYASCGDMKAAKELYDVMSD----KDGVTWVAMIAGYGKLGNVTEARRLF 274
+ ++ ++ D KEL+ V D I Y K G AR++F
Sbjct: 116 DRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVF 175
Query: 275 DGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDI 334
D P + +W A++ G A E +EMF +++++ ++ + MV ++C L D+
Sbjct: 176 DENP-ERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDL 234
Query: 335 RMSNALTDHIEEGCCDRT--LIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMIT 392
++ L + + + +++ N+LI+M+ KCG +DLA F MR R++ ++S+MI
Sbjct: 235 SLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIV 294
Query: 393 AFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIE 452
+A +G + +A++ F +M + G++PN++TF+GVL+AC GLVEEG +F +M F++E
Sbjct: 295 GYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELE 354
Query: 453 PLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARH 512
P HY CIVDLL R GQL+ A +++E + WG L+ C G+VE+ E A +
Sbjct: 355 PGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPY 414
Query: 513 LLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSW 560
++E++P + G YV+LAN+YA + W E V+KLM K + K YS+
Sbjct: 415 MVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 131/256 (51%), Gaps = 12/256 (4%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P AF+W +++R+++ H + I Y M +S VLP ++ V+ A ++ GK+
Sbjct: 80 PIAFLWNNIMRSYIRHESPL-DAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKE 138
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
+H V+ GF G++ ++ + +Y K+G +AR VFD +R + +W A+I G
Sbjct: 139 LHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 205 MVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVM------SDKDGVTW 254
EA +F +M E + FT ++ A GD+ A +L+ + D +
Sbjct: 199 ANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML 258
Query: 255 VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
++I YGK G + A +F+ + ++ +W++M+ YA NG E +E F+++R+ +
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGV 317
Query: 315 KITEVAMVGAISACAQ 330
+ ++ VG +SAC
Sbjct: 318 RPNKITFVGVLSACVH 333
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 248/498 (49%), Gaps = 58/498 (11%)
Query: 129 VLNACGRVPAMVEGKQVHGRLVQSGF--GGNKIVQTALLGMYAKSGCVCDARDVFD--GM 184
+L C + GK++H L SG + AL YA SG + A+ +FD +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER-------------------------- 218
++D V WT ++ +++ ++V + LF M +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 219 -------------NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLG 265
+ ++ Y CG + K +++ + +K V+W ++ K
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 266 NVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE-VRQAKIKITEVAMVGA 324
+ R +F +P ++A W M+A Y G+ +E +E+ E V + + V +
Sbjct: 192 GLERGREVFHEMP-ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 325 ISACAQLRDIRMSN-----ALTDHI---EEGCCDRTLIVSNALINMHSKCGNIDLAWREF 376
+SACAQ ++ + AL + EE D ++V AL++M++KCGNID + F
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYD-DVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 377 STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
MR R++ T++A+ + A HGK + ID+F +M +E +KP+ +TF VL+ACS SG+V+
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVD 368
Query: 437 EGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAA 496
EG R F + + +EP +HYAC+VDLLGRAG +E A L++E + GSLL +
Sbjct: 369 EGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGS 427
Query: 497 CRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPS 556
C VHG VE+ E R L+++ P ++ +L++NMY ++ + A+ ++ + K+GI+K
Sbjct: 428 CSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIP 487
Query: 557 GYS--WIQREISRQQTAD 572
G S ++ + R + D
Sbjct: 488 GLSSIYVNDSVHRFSSGD 505
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 245/458 (53%), Gaps = 11/458 (2%)
Query: 129 VLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD 188
+L + R + ++G Q+HG +V+SG +V L+ Y+KS D+R F+ +
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 189 VVAWTAMICGYAKVAM-MVEARWLFDNMGERNSFTWTTMVAGYASCG-----DMKAAKEL 242
W+++I +A+ + + +L M + + SC D+ +
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 243 YDVMSDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAK 300
+ + D +V +++ Y K G + AR++FD +P ++ TW+ M+ YAQ G +
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGMMYGYAQMGENE 199
Query: 301 EGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALI 360
E + +FKE + + + + IS CA + + + + D + V ++L+
Sbjct: 200 EALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLV 259
Query: 361 NMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQV 420
+++SKCG + A++ F+ + +++ ++AM+ A+A+H +Q I+LF RM G+KPN +
Sbjct: 260 SLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFI 319
Query: 421 TFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE 480
TF+ VLNACS +GLV+EG +F M IEP +HYA +VD+LGRAG+L+ A +I
Sbjct: 320 TFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITN 378
Query: 481 NATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGA 540
+ WG+LL +C VH N EL AA + E+ P SG ++ L+N YA+ ++ A
Sbjct: 379 MPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDA 438
Query: 541 EVVKKLMSKKGIKKPSGYSWIQREISRQQTADSIKKKH 578
+KL+ +G KK +G SW++ E ++ T + +++H
Sbjct: 439 AKARKLLRDRGEKKETGLSWVE-ERNKVHTFAAGERRH 475
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 139/270 (51%), Gaps = 17/270 (6%)
Query: 119 VLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDAR 178
VLPS ++L+ C G+ VH +++G+ + V ++L+ MYAK G + AR
Sbjct: 118 VLPSATKSCAILSRCDI------GRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 179 DVFDGMDDRDVVAWTAMICGYAKVAMMVEARW-----LFDNMGERNSFTWTTMVAGYASC 233
+FD M R+VV W+ M+ GYA++ EA W LF+N+ N ++++++++ A+
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV-NDYSFSSVISVCANS 230
Query: 234 GDMKAAKELYDV----MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
++ ++++ + D ++++ Y K G A ++F+ +PV ++ W AM
Sbjct: 231 TLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPV-KNLGIWNAM 289
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
L YAQ+ + ++ IE+FK ++ + +K + + ++AC+ + D ++E
Sbjct: 290 LKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRI 349
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTM 379
+ T +L++M + G + A + M
Sbjct: 350 EPTDKHYASLVDMLGRAGRLQEALEVITNM 379
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 262/522 (50%), Gaps = 32/522 (6%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
++N ++ NI YA ++FDTMP + WT+LI ++ + + ++ M S
Sbjct: 102 LINMYAKCGNILYARQVFDTMPE-RNVVSWTALITGYV-QAGNEQEGFCLFSSM-LSHCF 158
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK---SGCVCDA 177
P+ FT SSVL +C P GKQVHG ++ G + V A++ MY + +A
Sbjct: 159 PNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEA 214
Query: 178 RDVFDGMDDRDVVAWTAMI-----CGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYAS 232
VF+ + +++V W +MI C K A+ V R D +G + T + +
Sbjct: 215 WTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRA-TLLNICSSLYK 273
Query: 233 CGDM------KAAKELYDVMSDKDGVTWV----AMIAGYGK-LGNVTEARRLFDGIPVPQ 281
D+ K +L+ + VT A+I Y + L + T+ +LF + +
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR 333
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
D W ++ +A + I +F ++RQ K+ + ACA L R + ++
Sbjct: 334 DIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIH 392
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQ 401
+ +G +++N+LI+ ++KCG++DL R F M RD+ ++++M+ A++ HG+
Sbjct: 393 AQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVD 452
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI 461
+ +F +M + P+ TFI +L+ACS +G VEEG R F+ M + P HYAC+
Sbjct: 453 SILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACV 509
Query: 462 VDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE-IDPED 520
+D+L RA + A +IK+ DA W +LL +CR HGN LG+ AA L E ++P +
Sbjct: 510 IDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTN 569
Query: 521 SGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
S +Y+ ++N+Y ++ + A + K M ++K SW +
Sbjct: 570 SMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTE 611
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 252/517 (48%), Gaps = 42/517 (8%)
Query: 54 LSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYAR 113
L+ + +++ F E + A K+FD MP D +I A + +++ + +
Sbjct: 50 LTRIAAKLVTFYVECGKVLDARKVFDEMPK-RDISGCVVMIGA-CARNGYYQESLDFFRE 107
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
M++ G+ F S+L A + GK +H +++ + + + ++L+ MY+K G
Sbjct: 108 MYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGE 167
Query: 174 VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASC 233
V +AR V F ++GE++ + M++GYA+
Sbjct: 168 VGNARKV-------------------------------FSDLGEQDLVVFNAMISGYANN 196
Query: 234 GDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGN---VTEARRLFDGIPVPQDASTW 286
A L M D +TW A+I+G+ + N V+E L D +W
Sbjct: 197 SQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSW 256
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH-IE 345
++++ N ++ + FK++ + ++ + AC L ++ + + +
Sbjct: 257 TSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVV 316
Query: 346 EGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAID 405
G D + S AL++M+ KCG I A F + T+++MI +A HG + A++
Sbjct: 317 TGLEDHGFVRS-ALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVE 375
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLL 465
LF +M G K + +TF +L ACS +GL + G F +M + I P EHYAC+VDLL
Sbjct: 376 LFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLL 435
Query: 466 GRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYV 525
GRAG+L AY +IK D WG+LLAACR HGN+EL AA+HL E++PE+SG +
Sbjct: 436 GRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGL 495
Query: 526 LLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
LL ++YA+ W +KK++ KK ++ G SW++
Sbjct: 496 LLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 264/518 (50%), Gaps = 41/518 (7%)
Query: 51 HHFLSPLLLR--VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCI 108
H F+S L ++ F ++ AHK+FD MP+ PD W SL+ ++ F+ I
Sbjct: 84 HGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPD-PDVISWNSLVSGYV-QSGRFQEGI 141
Query: 109 STYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGF-GGNKIVQTALLGM 167
+ +H+S V P+ F+F++ L AC R+ G +H +LV+ G GN +V L+ M
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 168 YAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMV 227
Y K CG+ A++V F +M E+++ +W +V
Sbjct: 202 YGK--------------------------CGFMDDAVLV-----FQHMEEKDTVSWNAIV 230
Query: 228 AGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWA 287
A + G ++ + M + D VT+ +I + K G+ A ++ +P P ++S+W
Sbjct: 231 ASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNP-NSSSWN 289
Query: 288 AMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEG 347
+L Y + + E E F ++ + ++ E ++ ++A A L + + + +
Sbjct: 290 TILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKL 349
Query: 348 CCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLF 407
D ++V++ALI+M+SKCG + A F TM +++ ++ MI+ +A +G S +AI LF
Sbjct: 350 GLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLF 409
Query: 408 FRMPKEG-LKPNQVTFIGVLNACSSSGL-VEEGCRFFQIMTGVFDIEPLPEHYACIVDLL 465
++ +E LKP++ TF+ +L CS + +E +F++M + I+P EH ++ +
Sbjct: 410 NQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAM 469
Query: 466 GRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEID--PEDSGT 523
G+ G++ +A +I+E D W +LL AC +++ +T A ++E+ +D
Sbjct: 470 GQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYL 529
Query: 524 YVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
Y++++N+YA ++W ++K+M + G+ K G SWI
Sbjct: 530 YIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 32/195 (16%)
Query: 323 GAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR 382
G +S C QL +T H G T + SN+L+ + +++ A + F M
Sbjct: 69 GYVSLCRQLH-----GYVTKH---GFVSNTRL-SNSLMRFYKTSDSLEDAHKVFDEMPDP 119
Query: 383 DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSS----------- 431
D+ +++++++ + + G+ Q+ I LF + + + PN+ +F L AC+
Sbjct: 120 DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIH 179
Query: 432 SGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWG 491
S LV+ G ++ G C++D+ G+ G ++ A L+ ++ D +W
Sbjct: 180 SKLVKLGLEKGNVVVG-----------NCLIDMYGKCGFMDDAV-LVFQHMEEKDTVSWN 227
Query: 492 SLLAACRVHGNVELG 506
+++A+C +G +ELG
Sbjct: 228 AIVASCSRNGKLELG 242
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 186/308 (60%), Gaps = 2/308 (0%)
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
+++ Y G+V A ++FD +P +D W +++ +A+NG +E + ++ E+ IK
Sbjct: 28 SLLHLYANCGDVASAYKVFDKMP-EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWRE 375
+V +SACA++ + + + ++ + R L SN L++++++CG ++ A
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 376 FSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPK-EGLKPNQVTFIGVLNACSSSGL 434
F M ++ +++++I A +G ++AI+LF M EGL P ++TF+G+L ACS G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 435 VEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLL 494
V+EG +F+ M + IEP EH+ C+VDLL RAGQ+++AY IK + W +LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 495 AACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKK 554
AC VHG+ +L E A +L+++P SG YVLL+NMYAS+ +W + ++K M + G+KK
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 555 PSGYSWIQ 562
G+S ++
Sbjct: 327 VPGHSLVE 334
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 145/299 (48%), Gaps = 34/299 (11%)
Query: 142 GKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAK 201
G+ +H +++SGFG VQ +LL +YA G V A VFD M ++D+VAW ++I G+A+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 202 VAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTW--- 254
EA L+ M + + FT ++++ A G + K ++ M K G+T
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI-KVGLTRNLH 125
Query: 255 --VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQA 312
++ Y + G V EA+ LFD + V +++ +W +++ A NG+ KE IE+FK +
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 313 K-IKITEVAMVGAISACAQ----------LRDIRMSNALTDHIEEGCCDRTLIVSNALIN 361
+ + E+ VG + AC+ R +R + IE C +++
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC---------MVD 235
Query: 362 MHSKCGNIDLAWREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
+ ++ G + A+ +M + ++ + ++ A HG S A F R+ L+PN
Sbjct: 236 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNH 292
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+L+ + ++ A+K+FD MP D W S+I F + ++ Y M+ G+
Sbjct: 29 LLHLYANCGDVASAYKVFDKMPE-KDLVAWNSVINGF-AENGKPEEALALYTEMNSKGIK 86
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P GFT S+L+AC ++ A+ GK+VH +++ G N LL +YA+ G V +A+ +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSF-----TWTTMVAGYASCGD 235
FD M D++ V+WT++I G A EA LF M T+ ++ + CG
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 236 MKAAKELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML 290
+K E + M ++ + + M+ + G V +A +P+ + W +L
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 291 ACYAQNG 297
+G
Sbjct: 267 GACTVHG 273
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMIT 392
D+R+ + + + V N+L+++++ CG++ A++ F M +D+ ++++I
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 393 AFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIE 452
FAE+GK ++A+ L+ M +G+KP+ T + +L+AC+ G + G R M V
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 453 PLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
L ++DL R G++E A +L E ++ +W SL+ V+G
Sbjct: 123 NL-HSSNVLLDLYARCGRVEEAKTLFDE-MVDKNSVSWTSLIVGLAVNG 169
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 230/459 (50%), Gaps = 42/459 (9%)
Query: 144 QVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVA 203
++H L++ G+ ++ + + A VF + + +V+ + AMI Y+ V
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 204 MMVEARWLFDNMGER----NSFTWTTMVAG------------------------------ 229
+E+ F +M R + +T+ ++
Sbjct: 82 PPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRI 141
Query: 230 -----YASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDAS 284
Y S G M A++++D MS+++ V W MI G+ G+V LF + +
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMS-ERSIV 200
Query: 285 TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI 344
+W +M++ ++ G +E +E+F E+ E +V + A L + +
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTA 260
Query: 345 EE-GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDA 403
E G + V NAL++ + K G+++ A F M+ R++ +++ +I+ A +GK +
Sbjct: 261 ESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFG 320
Query: 404 IDLFFRMPKEG-LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
IDLF M +EG + PN+ TF+GVL CS +G VE G F +M F +E EHY +V
Sbjct: 321 IDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMV 380
Query: 463 DLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSG 522
DL+ R+G++ A+ +K +A+A WGSLL+ACR HG+V+L E AA L++I+P +SG
Sbjct: 381 DLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSG 440
Query: 523 TYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
YVLL+N+YA + +W E V+ LM K ++K +G S I
Sbjct: 441 NYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 202/479 (42%), Gaps = 89/479 (18%)
Query: 52 HFL---SPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCI 108
HFL + LL ++ SN YA+++F + N P+ ++ ++I+ + S +
Sbjct: 30 HFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQN-PNVLVFNAMIKCY-SLVGPPLESL 87
Query: 109 STYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMY 168
S ++ M G+ +T++ +L +C + + GK VHG L+++GF ++ ++ +Y
Sbjct: 88 SFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELY 147
Query: 169 AKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVA 228
G + DA+ VFD M +R+VV W MI G+ + LF M ER+ +W +M++
Sbjct: 148 TSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMIS 207
Query: 229 GYASCGDMKAAKELYDVMSDK----------------------DGVTWV----------- 255
+ CG + A EL+ M D+ D W+
Sbjct: 208 SLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFK 267
Query: 256 -------AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE 308
A++ Y K G++ A +F + ++ +W +++ A NG + GI++F
Sbjct: 268 DFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGEFGIDLFDA 326
Query: 309 -VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCG 367
+ + K+ E +G ++ C + T +E G L++ + ++
Sbjct: 327 MIEEGKVAPNEATFLGVLACC----------SYTGQVERGEELFGLMMERFKLEARTE-- 374
Query: 368 NIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN 427
Y AM+ + G+ +A MP + N + +L+
Sbjct: 375 ------------------HYGAMVDLMSRSGRITEAFKFLKNMP---VNANAAMWGSLLS 413
Query: 428 ACSSSGLVEEGCRFFQIMT-GVFDIEPLPE-HYACIVDLL---GRAGQLERAYSLIKEN 481
AC S G V + ++ + IEP +Y + +L GR +E+ +L+K+N
Sbjct: 414 ACRSHGDV----KLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKN 468
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 259/514 (50%), Gaps = 30/514 (5%)
Query: 59 LRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSH-RAHFRHCISTYARMHQS 117
+RVLN S E+ D F+WTS++ F+ + RA + + T+ M
Sbjct: 279 VRVLNSSGEQ-----------------DVFLWTSVVSGFVRNLRA--KEAVGTFLEMRSL 319
Query: 118 GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK-SGCVCD 176
G+ P+ FT+S++L+ C V ++ GKQ+H + ++ GF + V AL+ MY K S +
Sbjct: 320 GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVE 379
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAG-YASCGD 235
A VF M +VV+WT +I G + + L M +R ++G +C
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Query: 236 MKAAKELYDVMS-------DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAA 288
++ + + ++ + D + V +++ Y V A + + +D T+ +
Sbjct: 440 LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK-RRDNITYTS 498
Query: 289 MLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC 348
++ + + G + + + + I++ ++++ G ISA A L + L + +
Sbjct: 499 LVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSG 558
Query: 349 CDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFF 408
V N+L++M+SKCG+++ A + F + D+ +++ +++ A +G A+ F
Sbjct: 559 FSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFE 618
Query: 409 RMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRA 468
M + +P+ VTF+ +L+ACS+ L + G +FQ+M +++IEP EHY +V +LGRA
Sbjct: 619 EMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRA 678
Query: 469 GQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLA 528
G+LE A +++ +A + +LL ACR GN+ LGE A L + P D Y+LLA
Sbjct: 679 GRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLA 738
Query: 529 NMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
++Y K A+ + LM++K + K G S ++
Sbjct: 739 DLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVE 772
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 183/367 (49%), Gaps = 15/367 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A KLFD M + F WT +I AF + F +S + M SG P+ FTFSSV+ +C
Sbjct: 77 ARKLFDEMSH-RTVFAWTVMISAF-TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC 134
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ + G +VHG ++++GF GN +V ++L +Y+K G +A ++F + + D ++WT
Sbjct: 135 AGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWT 194
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
MI EA + M + N FT+ ++ G +S ++ K ++ + +
Sbjct: 195 MMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVR 253
Query: 250 ----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
+ V +++ Y + + +A R+ + QD W ++++ + +N AKE +
Sbjct: 254 GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL-TDHIEEGCCDRTLIVSNALINMHS 364
F E+R ++ +S C+ +R + + + I+ G D T V NAL++M+
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST-DVGNALVDMYM 371
Query: 365 KCGNIDL-AWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFI 423
KC ++ A R F M ++ +++ +I +HG QD L M K ++PN VT
Sbjct: 372 KCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLS 431
Query: 424 GVLNACS 430
GVL ACS
Sbjct: 432 GVLRACS 438
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 171/387 (44%), Gaps = 17/387 (4%)
Query: 132 ACGRVPAMVE------GKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD 185
+C R+ + E G +H +++ G N + LL +Y K+ + +AR +FD M
Sbjct: 26 SCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMS 85
Query: 186 DRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKE 241
R V AWT MI + K A LF+ M N FT++++V A D+
Sbjct: 86 HRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGR 145
Query: 242 LYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
++ + + + V ++ Y K G EA LF + D +W M++
Sbjct: 146 VHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISSLVGAR 204
Query: 298 YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSN 357
+E ++ + E+ +A + E V + A + L + + +I +++
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKT 263
Query: 358 ALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKP 417
+L++ +S+ ++ A R ++ +D++ ++++++ F + ++++A+ F M GL+P
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 418 NQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL 477
N T+ +L+ CS+ ++ G + V E + +VD+ + E S
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASR 382
Query: 478 IKENATSADATTWGSLLAACRVHGNVE 504
+ S + +W +L+ HG V+
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHGFVQ 409
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/533 (27%), Positives = 257/533 (48%), Gaps = 91/533 (17%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
AHK+FD +P D T++I F+ H + R+ G+ P+ FTF +V+ +
Sbjct: 46 AHKVFDEIPEL-DVISATAVIGRFVKESRHVEAS-QAFKRLLCLGIRPNEFTFGTVIGSS 103
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ GKQ+H ++ G N V +A+L
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLN--------------------------- 136
Query: 194 AMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVT 253
C Y K++ + +AR FD+ + N + T +++GY + + A L+ M ++ VT
Sbjct: 137 ---C-YVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVT 192
Query: 254 WVAMIAGYGKLGNVTEARRLF-----DGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE 308
W A+I G+ + G EA F +G+ +P +++ A+ A
Sbjct: 193 WNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITA----------------- 235
Query: 309 VRQAKIKITEVAMVGA---ISACA-QLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
I+ +A GA I ACA + R + + V N+LI+ +S
Sbjct: 236 -------ISNIASHGAGKSIHACAIKFLGKRFN---------------VFVWNSLISFYS 273
Query: 365 KCGNIDLAWREFSTMR--CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE-GLKPNQVT 421
KCGN++ + F+ + R++ ++++MI +A +G+ ++A+ +F +M K+ L+PN VT
Sbjct: 274 KCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVT 333
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPE--HYACIVDLLGRAGQLERAYSLIK 479
+GVL AC+ +GL++EG +F +D L E HYAC+VD+L R+G+ + A LIK
Sbjct: 334 ILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIK 393
Query: 480 ENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVG 539
W +LL C++H N L + AA +LE+DP D +YV+L+N Y++ + W
Sbjct: 394 SMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQN 453
Query: 540 AEVVKKLMSKKGIKKPSGYSWIQ-----REISRQQTADSIKKKHFNLLADFSQ 587
++++ M + G+K+ +G SWI+ R + +K + + +LA SQ
Sbjct: 454 VSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQ 506
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 232/446 (52%), Gaps = 17/446 (3%)
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
S+ + G P+ V V+GR+ + + + I L+ Y ++G + +AR VFD M DR
Sbjct: 2 SMYSKLGDFPSAV---AVYGRMRKKNYMSSNI----LINGYVRAGDLVNARKVFDEMPDR 54
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELY 243
+ W AMI G + E LF M + +T ++ +G A + ++++
Sbjct: 55 KLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH 114
Query: 244 DVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYA 299
+ D V ++ Y + G + + + +PV ++ W ++ AQNG
Sbjct: 115 GYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV-RNLVAWNTLIMGNAQNGCP 173
Query: 300 KEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNAL 359
+ + ++K ++ + + ++ V +S+C+ L + + + V ++L
Sbjct: 174 ETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSL 233
Query: 360 INMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE-GLKPN 418
I+M+SKCG + A + FS D +S+MI+A+ HG+ +AI+LF M ++ ++ N
Sbjct: 234 ISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEIN 293
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLI 478
+V F+ +L ACS SGL ++G F +M + +P +HY C+VDLLGRAG L++A ++I
Sbjct: 294 EVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAII 353
Query: 479 KENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWV 538
+ D W +LL+AC +H N E+ + + +L+IDP DS YVLLAN++AS +W
Sbjct: 354 RSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWR 413
Query: 539 GAEVVKKLMSKKGIKKPSGYSWIQRE 564
V+K M K +KK +G SW + +
Sbjct: 414 DVSEVRKSMRDKNVKKEAGISWFEHK 439
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 129/282 (45%), Gaps = 18/282 (6%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
++N ++ A K+FD MP+ W ++I + + +S + MH G
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPD-RKLTTWNAMIAGLIQFEFN-EEGLSLFREMHGLGFS 88
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P +T SV + + ++ G+Q+HG ++ G + +V ++L MY ++G + D V
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDM 236
M R++VAW +I G A+ +L+ M N T+ T++ +SC D+
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL---SSCSDL 205
Query: 237 -------KAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
+ E + + ++I+ Y K G + +A + F +D W++M
Sbjct: 206 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSM 264
Query: 290 LACYAQNGYAKEGIEMFKEV-RQAKIKITEVAMVGAISACAQ 330
++ Y +G E IE+F + Q ++I EVA + + AC+
Sbjct: 265 ISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSH 306
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK 170
Y M SG P+ TF +VL++C + +G+Q+H ++ G V ++L+ MY+K
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 171 SGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER-----NSFTWTT 225
GC+ DA F +D D V W++MI Y EA LF+ M E+ N +
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 226 MVAGYASCGDMKAAKELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVP 280
++ + G EL+D+M +K G + ++ G+ G + +A + +P+
Sbjct: 300 LLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 359
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMFKEVRQ 311
D W +L+ + A+ +FKE+ Q
Sbjct: 360 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 240/499 (48%), Gaps = 16/499 (3%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A LF MP P+ W LI F+ + + RM + G++ GF L AC
Sbjct: 192 AVTLFHRMPQ-PNVVSWNCLISGFVDKGS--PRALEFLVRMQREGLVLDGFALPCGLKAC 248
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD---DRDVV 190
+ GKQ+H +V+SG + +AL+ MY+ G + A DVF + V
Sbjct: 249 SFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVA 308
Query: 191 AWTAMICGYAKVAMMVEARWLFDNMGERN----SFTWTTMVAGYASCGDMKAAKELYDVM 246
W +M+ G+ A WL + + + S+T + + + +++ +++ ++
Sbjct: 309 VWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLV 368
Query: 247 S----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
+ D + ++ + +GN+ +A +LF +P +D ++ ++ ++G+
Sbjct: 369 VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLA 427
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+F+E+ + + + + + C+ L + + + + + + AL++M
Sbjct: 428 FYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDM 487
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+ KCG ID F M RD+ +++ +I F ++G+ ++A F +M G++PN+VTF
Sbjct: 488 YVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTF 547
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
+G+L+AC SGL+EE + M + +EP EHY C+VDLLG+AG + A LI +
Sbjct: 548 LGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMP 607
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEV 542
D T W SLL AC H N L A LL+ P+D Y L+N YA+ W
Sbjct: 608 LEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSK 667
Query: 543 VKKLMSKKGIKKPSGYSWI 561
V++ K G K+ SG SWI
Sbjct: 668 VREAAKKLGAKE-SGMSWI 685
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 199/473 (42%), Gaps = 47/473 (9%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSG-FTFSSVLNA 132
AHK+FD M + WT+++ + S I Y RM S + F +S+VL A
Sbjct: 59 AHKVFDEMSE-RNIVTWTTMVSGYTSD-GKPNKAIELYRRMLDSEEEAANEFMYSAVLKA 116
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
CG V + G V+ R+ + G+ ++ +++ MY K+G + +A F + +W
Sbjct: 117 CGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSW 176
Query: 193 TAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSD---- 248
+I GY K +M EA LF M + N +W +++G+ G +A + L + +
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVL 236
Query: 249 -----------------------------KDGV-----TWVAMIAGYGKLGNVTEARRLF 274
K G+ A+I Y G++ A +F
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Query: 275 --DGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
+ + V + W +ML+ + N + + + ++ Q+ + + GA+ C
Sbjct: 297 HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYV 356
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMIT 392
++R+ + + + IV + L+++H+ GNI A + F + +D+ +S +I
Sbjct: 357 NLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIR 416
Query: 393 AFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQI-MTGVFDI 451
+ G + A LF + K GL +Q +L CSS + G + + + ++
Sbjct: 417 GCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYES 476
Query: 452 EPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVE 504
EP+ +VD+ + G+++ L + D +W ++ +G VE
Sbjct: 477 EPVTA--TALVDMYVKCGEIDNGVVLF-DGMLERDVVSWTGIIVGFGQNGRVE 526
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 122/243 (50%), Gaps = 14/243 (5%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRH-CISTYARMHQSGV 119
+++ + NI AHKLF +PN D ++ LIR + ++ F + + + G+
Sbjct: 383 LVDLHANVGNIQDAHKLFHRLPN-KDIIAFSGLIRGCV--KSGFNSLAFYLFRELIKLGL 439
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
F S++L C + ++ GKQ+HG ++ G+ + TAL+ MY K G + +
Sbjct: 440 DADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVV 499
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFD---NMG-ERNSFTWTTMVAGYASCGD 235
+FDGM +RDVV+WT +I G+ + + EA F N+G E N T+ +++ G
Sbjct: 500 LFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGL 559
Query: 236 MKAAKELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML 290
++ A+ + M + G+ + ++ G+ G EA L + +P+ D + W ++L
Sbjct: 560 LEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLL 619
Query: 291 -AC 292
AC
Sbjct: 620 TAC 622
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 181/431 (41%), Gaps = 49/431 (11%)
Query: 130 LNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDV 189
L CG+V A G+ + +++ G N + ++ MY + DA VFD M +R++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 190 VAWTAMICGYAKVAMMVEARWLFDNMGER-----NSFTWTTMVAGYASCGDMKAAKELY- 243
V WT M+ GY +A L+ M + N F ++ ++ GD++ +Y
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 244 ---------DV--------MSDKDG-----------------VTWVAMIAGYGKLGNVTE 269
DV M K+G +W +I+GY K G + E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 270 ARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACA 329
A LF +P P + +W +++ + G + +E +++ + + A+ + AC+
Sbjct: 192 AVTLFHRMPQP-NVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 330 QLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRC---RDMYT 386
+ M L + + + + +ALI+M+S CG++ A F + +
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 387 YSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQ-IM 445
+++M++ F + +++ A+ L ++ + L + T G L C + + G + ++
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 446 TGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVEL 505
++++ + + +VDL G ++ A+ L + D + L+ C G L
Sbjct: 370 VSGYELDYIVG--SILVDLHANVGNIQDAHKLF-HRLPNKDIIAFSGLIRGCVKSGFNSL 426
Query: 506 GETAARHLLEI 516
R L+++
Sbjct: 427 AFYLFRELIKL 437
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 142/337 (42%), Gaps = 49/337 (14%)
Query: 226 MVAGYASCGDMKAAKELYDVMSD--KDGVTWVAMIAG-----YGKLGNVTEARRLFDGIP 278
+ AG CG ++A K + + K G++ IA Y +++A ++FD +
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 279 VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAI-SACAQLRDIRMS 337
++ TW M++ Y +G + IE+++ + ++ + M A+ AC + DI++
Sbjct: 68 -ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 338 NALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEH 397
+ + I + +++ N++++M+ K G + A F + +++ +I+ + +
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 398 GKSQDAIDLFFRMP------------------------------KEGLKPNQVTFIGVLN 427
G +A+ LF RMP +EGL + L
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 428 ACSSSGLVEEGCRFF--QIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKEN--AT 483
ACS GL+ G + + +G +E P + ++D+ G L A + + A
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSG---LESSPFAISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 484 SADATTWGSLLAACRVHGNVELGETAARHLLEIDPED 520
++ W S+L+ ++ E E A LL+I D
Sbjct: 304 NSSVAVWNSMLSGFLIN---EENEAALWLLLQIYQSD 337
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 181/319 (56%), Gaps = 19/319 (5%)
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
+++ Y +G+V AR++FD P Q+ W AM++ Y +N + E IE+FK + KI+
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRT------LIVSNALINMHSKCGNI 369
+ V + A+SACA L ++M + I R L + N+L+NM+ K G
Sbjct: 165 LDGVIVTVALSACADLGAVQMG----EEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGET 220
Query: 370 DLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP------KEGLKPNQVTFI 423
+ A + F +D+ TY++MI +A +G++Q++++LF +M + PN VTFI
Sbjct: 221 EKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFI 280
Query: 424 GVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT 483
GVL ACS SGLVEEG R F+ M ++++P H+ C+VDL R+G L+ A+ I +
Sbjct: 281 GVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPI 340
Query: 484 SADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVV 543
+ W +LL AC +HGNVELGE R + E+D + G YV L+N+YAS+ W +
Sbjct: 341 KPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKM 400
Query: 544 KKLMSKKGIKKPSGYSWIQ 562
+ + K ++ G SWI+
Sbjct: 401 RDRVRK---RRMPGKSWIE 416
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 165/366 (45%), Gaps = 68/366 (18%)
Query: 94 IRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC----GRVPAMVEGKQVHGRL 149
I+A L R FR PS SVL A + + ++G+Q+H +
Sbjct: 45 IKALLDFRHRFRQS-------------PSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 150 VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR-DVVAWTAMICGYAKVAMMVEA 208
+ GF +QT+L+G Y+ G V AR VFD ++ ++V WTAMI Y + VEA
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 209 RWLFDNM-GERNSFTWTTMVAGYASCGDMKAAK---ELYDVMSDK------DGVTWVAMI 258
LF M E+ + ++C D+ A + E+Y + D +++
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLL 211
Query: 259 AGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVR---QAK-- 313
Y K G +AR+LFD + +D +T+ +M+ YA NG A+E +E+FK+++ Q++
Sbjct: 212 NMYVKSGETEKARKLFDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 314 -IKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLA 372
I +V +G + AC+ + +EEG H K +D
Sbjct: 271 VITPNDVTFIGVLMACSH----------SGLVEEG-------------KRHFKSMIMDY- 306
Query: 373 WREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS 432
++ R+ + + M+ F G +DA + +MP +KPN V + +L ACS
Sbjct: 307 -----NLKPREAH-FGCMVDLFCRSGHLKDAHEFINQMP---IKPNTVIWRTLLGACSLH 357
Query: 433 GLVEEG 438
G VE G
Sbjct: 358 GNVELG 363
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 142/330 (43%), Gaps = 40/330 (12%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
++ F S ++ YA ++FD P + +WT++I A+ + I + RM +
Sbjct: 106 LVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV-EAIELFKRMEAEKIE 164
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSG--FGGNKIVQTALLGMYAKSGCVCDAR 178
G + L+AC + A+ G++++ R ++ + ++ +LL MY KSG AR
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 179 DVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKA 238
+FD +DV +T+MI GYA E+ LF MK
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKK---------------------MKT 263
Query: 239 AKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPV-----PQDASTWAAMLACY 293
+ D + + VT++ ++ G V E +R F + + P++A + M+ +
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAH-FGCMVDLF 322
Query: 294 AQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTL 353
++G+ K+ E + Q IK V + AC+ ++ + + I E DR
Sbjct: 323 CRSGHLKDAHEF---INQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFE--LDRDH 377
Query: 354 IVSN-ALINMHSKCGNIDLAWREFSTMRCR 382
+ AL N+++ G W E S MR R
Sbjct: 378 VGDYVALSNIYASKG----MWDEKSKMRDR 403
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 177/321 (55%), Gaps = 3/321 (0%)
Query: 255 VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
V ++ Y G++ A LF + + +D W AM++ Y Q G +EG+ ++ ++RQ +I
Sbjct: 147 VKLLILYALSGDLQTAGILFRSLKI-RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRI 205
Query: 315 KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWR 374
+ AC+ L + + + C +IV +AL++M+ KC + R
Sbjct: 206 VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHR 265
Query: 375 EFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGL 434
F + R++ T++++I+ + HGK + + F +M +EG +PN VTF+ VL AC+ GL
Sbjct: 266 VFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGL 325
Query: 435 VEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLL 494
V++G F M + IEP +HYA +VD LGRAG+L+ AY + ++ WGSLL
Sbjct: 326 VDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
Query: 495 AACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKK 554
ACR+HGNV+L E AA LE+DP + G YV+ AN YAS A V++ M G+KK
Sbjct: 386 GACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKK 445
Query: 555 PSGYSWI--QREISRQQTADS 573
GYS I Q E+ R D+
Sbjct: 446 DPGYSQIELQGEVHRFMKDDT 466
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 10/224 (4%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
D W ++I ++ + + + Y M Q+ ++P +TF+SV AC + + GK+
Sbjct: 173 DLIPWNAMISGYV-QKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
H +++ N IV +AL+ MY K D VFD + R+V+ WT++I GY +
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 291
Query: 206 VEARWLFDNMGER----NSFTWTTMVAGYASCGDM-KAAKELYDVMSD----KDGVTWVA 256
E F+ M E N T+ ++ G + K + Y + D +G + A
Sbjct: 292 SEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAA 351
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAK 300
M+ G+ G + EA P + W ++L +G K
Sbjct: 352 MVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVK 395
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 146/334 (43%), Gaps = 54/334 (16%)
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
SG+ T++ +L C + +GK++H ++ GF N+ ++ LL +YA SG +
Sbjct: 102 SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYAS 232
A +F + RD++ W AMI GY + + E +++ +M + + +T+ ++ ++
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSA 221
Query: 233 CGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAA 288
++ K + VM + + + A++ Y K + ++ R+FD + ++ TW +
Sbjct: 222 LDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST-RNVITWTS 280
Query: 289 MLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC 348
+++ Y +G E ++ F+++++ + V + ++AC
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTAC-------------------- 320
Query: 349 CDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDM------YTYSAMITAFAEHGKSQD 402
+ G +D W F +M+ RD Y+AM+ G+ Q+
Sbjct: 321 ---------------NHGGLVDKGWEHFYSMK-RDYGIEPEGQHYAAMVDTLGRAGRLQE 364
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
A + + P K + + +L AC G V+
Sbjct: 365 AYEFVMKSP---CKEHPPVWGSLLGACRIHGNVK 395
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 250/506 (49%), Gaps = 58/506 (11%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQS--GVLPSGFTFSSVLN 131
A++LF MP + WT++I F + +R + + M + V P+G T S+
Sbjct: 250 AYRLFCEMPE-RNIVSWTAMISGF-AWNELYREALMLFLEMKKDVDAVSPNGETLISLAY 307
Query: 132 ACGRVPAMVE--GKQVHGRLVQSGF---GGNKIVQTALLGMYAKSGCVCDARDVFDGMDD 186
ACG + G+Q+H +++ +G+ + + +L+ MYA SG + A+ + + +
Sbjct: 308 ACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ES 365
Query: 187 RDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYD-V 245
D+ + +I Y K GD++ A+ L++ V
Sbjct: 366 FDLQSCNIIINRYLK-------------------------------NGDLERAETLFERV 394
Query: 246 MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
S D V+W +MI GY + G+V+ A LF + +D TW M++ QN E +
Sbjct: 395 KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH-DKDGVTWTVMISGLVQNELFAEAASL 453
Query: 306 FKEVRQAKIKITE------VAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNAL 359
++ + +K ++ GA S Q + I A T C D LI+ N+L
Sbjct: 454 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKT----TACYDPDLILQNSL 509
Query: 360 INMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
++M++KCG I+ A+ F+ M +D ++++MI + HG + A++LF M G KPN
Sbjct: 510 VSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNS 569
Query: 420 VTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIK 479
VTF+GVL+ACS SGL+ G F+ M + I+P +HY ++DLLGRAG+L+ A I
Sbjct: 570 VTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFIS 629
Query: 480 ENATSADATTWGSLLAAC----RVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQD 535
+ D T +G+LL C R + E AA LLE+DP ++ +V L N+YA
Sbjct: 630 ALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLG 689
Query: 536 KWVGAEVVKKLMSKKGIKKPSGYSWI 561
+ + ++K M KG+KK G SW+
Sbjct: 690 RHDMEKEMRKEMGIKGVKKTPGCSWV 715
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 163/348 (46%), Gaps = 58/348 (16%)
Query: 94 IRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGR----- 148
+R+ +S R ++ I Y G GF+ L + + EG VH R
Sbjct: 18 LRSSISCRRYYGDKIPNY------GSYRRGFSNEEAL----ILRRLSEGGLVHARHLLDK 67
Query: 149 LVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEA 208
+ Q G + T+LL YAK+G + +AR +F+ M +R++V AM+ GY K M EA
Sbjct: 68 IPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEA 127
Query: 209 RWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVT 268
LF M +N +WT M+ G + A EL+D M +++ V+W ++ G + G++
Sbjct: 128 WTLFREM-PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDME 186
Query: 269 EARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISAC 328
+A+++FD +P +D +W AM+ Y +N +E +F ++ + + +T +MV
Sbjct: 187 KAKQVFDAMP-SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV-VTWTSMV------ 238
Query: 329 AQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYS 388
G C + G++ A+R F M R++ +++
Sbjct: 239 -----------------YGYC---------------RYGDVREAYRLFCEMPERNIVSWT 266
Query: 389 AMITAFAEHGKSQDAIDLFFRMPK--EGLKPNQVTFIGVLNACSSSGL 434
AMI+ FA + ++A+ LF M K + + PN T I + AC G+
Sbjct: 267 AMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 178/386 (46%), Gaps = 46/386 (11%)
Query: 157 NKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG 216
N + L+ ++G + A+ VFD M RDVV+W AMI GY + M EA+ LF +M
Sbjct: 168 NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS 227
Query: 217 ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLF-- 274
E+N TWT+MV GY GD++ A L+ M +++ V+W AMI+G+ EA LF
Sbjct: 228 EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLE 287
Query: 275 ---DGIPVPQDASTWAAMLACYAQNGYAKE----GIEMFKEV------------RQAKIK 315
D V + T ++ YA G E G ++ +V R AK
Sbjct: 288 MKKDVDAVSPNGETLISL--AYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSL 345
Query: 316 ITEVAMVGAISACAQLR----DIRMSNALTD-HIEEGCCDRTLIVSNALINMHSK----- 365
+ A G I++ L D++ N + + +++ G +R + + ++H K
Sbjct: 346 VHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTS 405
Query: 366 -------CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
G++ A+ F + +D T++ MI+ ++ +A L M + GLKP
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPL 465
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIM---TGVFDIEPLPEHYACIVDLLGRAGQLERAY 475
T+ +L++ ++ +++G ++ T +D + + ++ +V + + G +E AY
Sbjct: 466 NSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQN--SLVSMYAKCGAIEDAY 523
Query: 476 SLIKENATSADATTWGSLLAACRVHG 501
+ + D +W S++ HG
Sbjct: 524 EIFAK-MVQKDTVSWNSMIMGLSHHG 548
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 13/273 (4%)
Query: 67 EKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTF 126
E ++ A LF + + D WT +I + + F S + M + G+ P T+
Sbjct: 412 EAGDVSRAFGLFQKLHD-KDGVTWTVMISGLVQNEL-FAEAASLLSDMVRCGLKPLNSTY 469
Query: 127 SSVLNACGRVPAMVEGKQVHGRLVQSG--FGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
S +L++ G + +GK +H + ++ + + I+Q +L+ MYAK G + DA ++F M
Sbjct: 470 SVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM 529
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVAGYASCGDMKAAK 240
+D V+W +MI G + + +A LF M G++ NS T+ +++ + G +
Sbjct: 530 VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGL 589
Query: 241 ELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQ 295
EL+ M + + +++MI G+ G + EA +P D + + A+L
Sbjct: 590 ELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGL 649
Query: 296 NGYAKEGIEMFKEVRQAKIKITEVAMVGAISAC 328
N K+ + + +++ V G ++ C
Sbjct: 650 NWRDKDAEGIAERAAMRLLELDPVNAPGHVALC 682
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 247/507 (48%), Gaps = 14/507 (2%)
Query: 64 FSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAH-FRHCISTYARMHQSGVLPS 122
F + ++ A KLFD P F+W S+IRA+ +AH F +S ++++ +S P
Sbjct: 49 FYALNDDLISARKLFDVFPE-RSVFLWNSIIRAY--AKAHQFTTVLSLFSQILRSDTRPD 105
Query: 123 GFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFD 182
FT++ + + +HG + SG G ++I +A++ Y+K+G + +A +F
Sbjct: 106 NFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFC 165
Query: 183 GMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKA 238
+ D D+ W MI GY + LF+ M R N +T + +G +
Sbjct: 166 SIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLV 225
Query: 239 AKELY----DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYA 294
A ++ + D A++ Y + + A +F+ I P D ++++ Y+
Sbjct: 226 AWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEP-DLVACSSLITGYS 284
Query: 295 QNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLI 354
+ G KE + +F E+R + K V + + +CA+L D + ++ + +
Sbjct: 285 RCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIK 344
Query: 355 VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG 414
V +ALI+M+SKCG + A F+ + +++ +++++I HG + A + F + + G
Sbjct: 345 VCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMG 404
Query: 415 LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERA 474
L P+++TF +L C SGL+ +G F+ M F IEP EHY +V L+G AG+LE A
Sbjct: 405 LIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEA 464
Query: 475 YSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTY-VLLANMYAS 533
+ + D+ G+LL+ C VH N L E A ++ + E Y V+L+N+YA
Sbjct: 465 FEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYAR 524
Query: 534 QDKWVGAEVVKKLMSKKGIKKPSGYSW 560
+W E ++ +S+ K G SW
Sbjct: 525 YGRWDEVERLRDGISESYGGKLPGISW 551
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 188/432 (43%), Gaps = 19/432 (4%)
Query: 135 RVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTA 194
++ + +++H + +S + T L YA + + AR +FD +R V W +
Sbjct: 17 KIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNS 76
Query: 195 MICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK- 249
+I YAK LF + ++FT+ + G++ D K + ++ +
Sbjct: 77 IIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSG 136
Query: 250 ---DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMF 306
D + A++ Y K G + EA +LF IP P D + W M+ Y G+ +GI +F
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDP-DLALWNVMILGYGCCGFWDKGINLF 195
Query: 307 KEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKC 366
++ + MV S + ++ ++ + D V AL+NM+S+C
Sbjct: 196 NLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRC 255
Query: 367 GNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVL 426
I A F+++ D+ S++IT ++ G ++A+ LF + G KP+ V VL
Sbjct: 256 MCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVL 315
Query: 427 NACS--SSGLVEEGCRFFQIMTGV-FDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT 483
+C+ S + + + I G+ DI+ + ++D+ + G L+ A SL
Sbjct: 316 GSCAELSDSVSGKEVHSYVIRLGLELDIKVC----SALIDMYSKCGLLKCAMSLFA-GIP 370
Query: 484 SADATTWGSLLAACRVHGNVELGETAARHLLEID--PEDSGTYVLLANMYASQDKWVGAE 541
+ ++ SL+ +HG +LE+ P++ LL S G E
Sbjct: 371 EKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQE 430
Query: 542 VVKKLMSKKGIK 553
+ +++ S+ GI+
Sbjct: 431 IFERMKSEFGIE 442
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 195/342 (57%), Gaps = 7/342 (2%)
Query: 224 TTMVAGYASCGDMKAAKELYD-VMSDKDGVTWVAMI-AGYGKLGNVTEARRLFDGIPVPQ 281
+ VA Y C A+ L +S GV + +I K+G A+++ Q
Sbjct: 69 VSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNAS-DQ 127
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQ-AKIKITEVAMVGAISACAQLRDIRMSNAL 340
+ TW M+ Y +N +E ++ K + IK + + +++ACA+L D+ + +
Sbjct: 128 NVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWV 187
Query: 341 TDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKS 400
+ + + I+S+AL+++++KCG+I + F +++ D+ ++AMIT FA HG +
Sbjct: 188 HSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLA 247
Query: 401 QDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYAC 460
+AI +F M E + P+ +TF+G+L CS GL+EEG +F +M+ F I+P EHY
Sbjct: 248 TEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGA 307
Query: 461 IVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPED 520
+VDLLGRAG+++ AY LI+ D W SLL++ R + N ELGE A ++L
Sbjct: 308 MVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNL---SKAK 364
Query: 521 SGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
SG YVLL+N+Y+S KW A+ V++LMSK+GI+K G SW++
Sbjct: 365 SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 119 VLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDAR 178
+ P+ F+F+S L AC R+ + K VH ++ SG N I+ +AL+ +YAK G + +R
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 179 DVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCG 234
+VF + DV W AMI G+A + EA +F M +S T+ ++ + CG
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 235 DMKAAKELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
++ KE + +MS + + + AM+ G+ G V EA L + +P+ D W ++
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 290 LA 291
L+
Sbjct: 341 LS 342
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 53/266 (19%)
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG-----ERNSFTWTTMVAGYA 231
A+ V D++V+ W MI GY + EA NM + N F++ + +A A
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 232 SCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWA 287
GD+ AK ++ +M D + + A++ Y K G++ +R +F + D S W
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK-RNDVSIWN 235
Query: 288 AMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEG 347
AM+ +A +G A E I +F E+ + + +G ++ C
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTC------------------- 276
Query: 348 CCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR-----DMYTYSAMITAFAEHGKSQD 402
S CG ++ F M R + Y AM+ G+ ++
Sbjct: 277 ----------------SHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKE 320
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNA 428
A +L MP ++P+ V + +L++
Sbjct: 321 AYELIESMP---IEPDVVIWRSLLSS 343
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 221/454 (48%), Gaps = 69/454 (15%)
Query: 115 HQSGVLP-SGFTFSSVLNACG--RVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKS 171
H + P FT+ +L A R P+++ G +HG ++ GF + VQTAL+GMY
Sbjct: 112 HNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVG 171
Query: 172 GCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYA 231
G + DA V FD M ERN TW M+ G
Sbjct: 172 GNMIDAHKV-------------------------------FDEMPERNPVTWNVMITGLT 200
Query: 232 SCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
+ GD + A + M ++ V+W +I GY ++ EA LF + M+A
Sbjct: 201 NLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLF------------SRMVA 248
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI-EEGCCD 350
C A IK E+ ++ + A L D++M ++ ++ + G
Sbjct: 249 CDA-------------------IKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVP 289
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRC--RDMYTYSAMITAFAEHGKSQDAIDLFF 408
+ V+N+LI+ ++KCG I A++ F + +++ +++ MI+AFA HG ++A+ +F
Sbjct: 290 CDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFK 349
Query: 409 RMPKEGLKPNQVTFIGVLNACSSSGLVEEG-CRFFQIMTGVFDIEPLPEHYACIVDLLGR 467
M + GLKPN+VT I VLNACS GL EE FF M + I P +HY C+VD+L R
Sbjct: 350 DMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRR 409
Query: 468 AGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLL 527
G+LE A + E A W LL AC V+ + EL E R L+E++ G YVL+
Sbjct: 410 KGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLM 469
Query: 528 ANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
+N++ +++ A+ +K M +G+ K G+S +
Sbjct: 470 SNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 210/422 (49%), Gaps = 9/422 (2%)
Query: 148 RLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVE 207
R+ SGF N++ ++LG +SG V R +F + V AW AM+ GY+ E
Sbjct: 340 RMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEE 399
Query: 208 ARWLFDNMGERN-SFTWTTMVAGYASCGDMK---AAKELYDVMS----DKDGVTWVAMIA 259
A F M +N TT+ +SC ++ K+++ V+ K+ +IA
Sbjct: 400 AISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIA 459
Query: 260 GYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKI-TE 318
Y + + + +FD D + W +M++ + N + + +F+ + Q + E
Sbjct: 460 VYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNE 519
Query: 319 VAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFST 378
+ +S+C++L + + + V AL +M+ KCG ID A + F
Sbjct: 520 TSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDA 579
Query: 379 MRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
+ ++ ++ MI + +G+ +A+ L+ +M G KP+ +TF+ VL ACS SGLVE G
Sbjct: 580 VLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG 639
Query: 439 CRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACR 498
M + IEP +HY CIVD LGRAG+LE A L + + + W LL++CR
Sbjct: 640 LEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCR 699
Query: 499 VHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGY 558
VHG+V L A L+ +DP+ S YVLL+N Y+S +W + ++ LM+K + K G
Sbjct: 700 VHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQ 759
Query: 559 SW 560
SW
Sbjct: 760 SW 761
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 199/460 (43%), Gaps = 99/460 (21%)
Query: 62 LNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLP 121
L F + ++ A ++FD MP D W ++I + L + + Y RM G LP
Sbjct: 79 LTFRCKVGDLGEACEVFDGMPE-RDVVSWNNMI-SVLVRKGFEEKALVVYKRMVCDGFLP 136
Query: 122 SGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD-ARDV 180
S FT +SVL+AC +V V G + HG V++G N V ALL MYAK G + D V
Sbjct: 137 SRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRV 196
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----------NSFTWT------ 224
F+ + + V++TA+I G A+ ++EA +F M E+ N + +
Sbjct: 197 FESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGC 256
Query: 225 --------------------------------TMVAGYASCGDMKAAKELYDVMSDKDGV 252
+++ YA DM A+ ++ M + + V
Sbjct: 257 DSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVV 316
Query: 253 TWVAMIAGYG-----------------------------------KLGNVTEARRLFDGI 277
+W MI G+G + G+V RR+F I
Sbjct: 317 SWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
Query: 278 PVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMS 337
P P S W AML+ Y+ + +E I F++++ +K + + +S+CA+LR +
Sbjct: 377 PQPS-VSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Query: 338 NALTDHIEEGCCDRTLIVSNA-----LINMHSKCGNIDLAWREF-STMRCRDMYTYSAMI 391
+ G RT I N+ LI ++S+C ++++ F + D+ +++MI
Sbjct: 436 KQI-----HGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMI 490
Query: 392 TAFAEHGKSQDAIDLFFRMPKEG-LKPNQVTFIGVLNACS 430
+ F + A+ LF RM + L PN+ +F VL++CS
Sbjct: 491 SGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCS 530
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 176/415 (42%), Gaps = 68/415 (16%)
Query: 140 VEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGY 199
+ GK +HG +V+ G + + LL +Y + G AR VFD M RDV +W A +
Sbjct: 23 LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 200 AKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS------------ 247
KV + EA +FD M ER+ +W M++ G + A +Y M
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 248 ---------------------------DKDGVTWVAMIAGYGKLGNVTE-ARRLFDGIPV 279
DK+ A+++ Y K G + + R+F+ +
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 280 PQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAIS------ACAQLRD 333
P + S + A++ A+ E ++MF+ + + +++ V + +S C L +
Sbjct: 203 PNEVS-YTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSE 261
Query: 334 IRMSNALTDHIEEGCC------DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTY 387
I N L I C L ++N+L+ +++K +++ A F+ M ++ ++
Sbjct: 262 I-YGNELGKQIH--CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSW 318
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTG 447
+ MI F + +S +++ RM G +PN+VT I VL AC SG VE G R F +
Sbjct: 319 NIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI-- 376
Query: 448 VFDIEPLPEHYACIVDLLGRAG--QLERAYSLIKE---NATSADATTWGSLLAAC 497
P P A L G + E A S ++ D TT +L++C
Sbjct: 377 -----PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 11/225 (4%)
Query: 77 LFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL-PSGFTFSSVLNACGR 135
+FD N D W S+I F H + + RMHQ+ VL P+ +F++VL++C R
Sbjct: 473 IFDDCINELDIACWNSMISGF-RHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 136 VPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAM 195
+ +++ G+Q HG +V+SG+ + V+TAL MY K G + AR FD + ++ V W M
Sbjct: 532 LCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEM 591
Query: 196 ICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDG 251
I GY EA L+ M GE+ + T+ +++ + G ++ E+ M G
Sbjct: 592 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 651
Query: 252 VT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
+ ++ ++ G+ G + +A +L + P + W +L+
Sbjct: 652 IEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 127/272 (46%), Gaps = 23/272 (8%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
++F ++P P W +++ + S+ H+ IS + +M + P T S +L++C
Sbjct: 369 GRRIFSSIPQ-PSVSAWNAMLSGY-SNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK------SGCVCDARDVFDGMDDR 187
R+ + GKQ+HG ++++ N + + L+ +Y++ S C+ D D +++
Sbjct: 427 ARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFD-----DCINEL 481
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMGER-----NSFTWTTMVAGYASCGDMKAAKEL 242
D+ W +MI G+ + +A LF M + N ++ T+++ + + ++
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 243 YDVMSD----KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGY 298
+ ++ D A+ Y K G + AR+ FD + + ++ W M+ Y NG
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEMIHGYGHNGR 600
Query: 299 AKEGIEMFKEVRQAKIKITEVAMVGAISACAQ 330
E + +++++ + K + V ++AC+
Sbjct: 601 GDEAVGLYRKMISSGEKPDGITFVSVLTACSH 632
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 145/498 (29%), Positives = 248/498 (49%), Gaps = 25/498 (5%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A +LF + + D W+++I ++ H IS + M + + P+ T +SVL C
Sbjct: 354 AEQLFINIED-RDVVSWSAMIASYEQAGQH-DEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
V A GK +H +++ TA++ MYAK G A F+ + +D VA+
Sbjct: 412 AGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFN 471
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS-- 247
A+ GY ++ +A ++ NM +S T M+ A C D +Y +
Sbjct: 472 ALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKH 531
Query: 248 --DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
D + A+I + K + A LFD + +W M+ Y +G A+E +
Sbjct: 532 GFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVAT 591
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL-TDHIEEGCCDRTLIVSNALINMHS 364
F++++ K + V V + A A+L +R+ ++ + I+ G C +T V N+L++M++
Sbjct: 592 FRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQT-PVGNSLVDMYA 650
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
KCG I+ + + F + + + +++ M++A+A HG + A+ LF M + LKP+ V+F+
Sbjct: 651 KCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLS 710
Query: 425 VLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
VL+AC +GLVEEG R F+ M IE EHYAC+VDLLG+AG A +++
Sbjct: 711 VLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVK 770
Query: 485 ADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVK 544
WG+LL + R+H N+ L A L++++P + Y SQD+ +G
Sbjct: 771 TSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY--------SQDRRLG----- 817
Query: 545 KLMSKKGIKKPSGYSWIQ 562
++ + IKK SWI+
Sbjct: 818 EVNNVSRIKKVPACSWIE 835
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 197/455 (43%), Gaps = 74/455 (16%)
Query: 77 LFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM-HQSGVLPSGFTFSSVLNACGR 135
+FD++ + P +W S+IR + H R + + M + G+ P ++F+ L AC
Sbjct: 55 IFDSVRD-PGVVLWNSMIRGYTRAGLH-REALGFFGYMSEEKGIDPDKYSFTFALKACAG 112
Query: 136 VPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAM 195
+G ++H + + G + + TAL+ MY C ARD
Sbjct: 113 SMDFKKGLRIHDLIAEMGLESDVYIGTALVEMY------CKARD---------------- 150
Query: 196 ICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDG 251
+V AR +FD M ++ TW TMV+G A G AA L+ M D D
Sbjct: 151 ---------LVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDH 201
Query: 252 VTWVAMIAGYGKLGNVTEARRLFDGIPVPQ------------------------------ 281
V+ +I KL ++ R G+ + +
Sbjct: 202 VSLYNLIPAVSKLEK-SDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEV 260
Query: 282 ---DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSN 338
D S+W M+A YA NG+ +E +E+F +R +++ +VA A+ A A + D+
Sbjct: 261 WRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGI 320
Query: 339 ALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHG 398
A+ D+ + + V+ +L++M+SKCG +++A + F + RD+ ++SAMI ++ + G
Sbjct: 321 AIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAG 380
Query: 399 KSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHY 458
+ +AI LF M + +KPN VT VL C+ G + DIE E
Sbjct: 381 QHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG-KSIHCYAIKADIESELETA 439
Query: 459 ACIVDLLGRAGQLERAYSLIKENATSADATTWGSL 493
++ + + G+ A E DA + +L
Sbjct: 440 TAVISMYAKCGRFSPALKAF-ERLPIKDAVAFNAL 473
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 189/449 (42%), Gaps = 16/449 (3%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++FD M + D W +++ L+ + + M V + +++ A
Sbjct: 154 ARQVFDKM-HVKDVVTWNTMVSG-LAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAV 211
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
++ + +HG +++ GF + L+ MY + A VF+ + +D +W
Sbjct: 212 SKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWG 269
Query: 194 AMICGYAKVAMMVEARWLFDNMGE----RNSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
M+ YA E LFD M N + + A GD+ ++D +
Sbjct: 270 TMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQ 329
Query: 250 ----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
D ++++ Y K G + A +LF I +D +W+AM+A Y Q G E I +
Sbjct: 330 GLIGDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSWSAMIASYEQAGQHDEAISL 388
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
F+++ + IK V + + CA + R+ ++ + + + L + A+I+M++K
Sbjct: 389 FRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAK 448
Query: 366 CGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
CG A + F + +D ++A+ + + G + A D++ M G+ P+ T +G+
Sbjct: 449 CGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGM 508
Query: 426 LNACS-SSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
L C+ S C + QI+ FD E H ++++ + L A L +
Sbjct: 509 LQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFE 566
Query: 485 ADATTWGSLLAACRVHGNVELGETAARHL 513
+W ++ +HG E R +
Sbjct: 567 KSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 176/386 (45%), Gaps = 26/386 (6%)
Query: 144 QVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVA 203
QVHG L+ SG + L+ Y+ +R +FD + D VV W +MI GY +
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 204 MMVEARWLFDNMGER-----NSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTW 254
+ EA F M E + +++T + A D K ++D+++ + D
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 255 VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
A++ Y K ++ AR++FD + V +D TW M++ AQNG + + +F ++R +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHV-KDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197
Query: 315 KITEVAMVGAISACAQLRDIRMSNALTDH-IEEGCCDRTLIVSNALINMHSKCGNIDLAW 373
I V++ I A ++L + L I++G S+ LI+M+ C ++ A
Sbjct: 198 DIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG---FIFAFSSGLIDMYCNCADLYAAE 254
Query: 374 REFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSG 433
F + +D ++ M+ A+A +G ++ ++LF M ++ N+V L A + G
Sbjct: 255 SVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVG 314
Query: 434 LVEEGCRF--FQIMTGVF-DIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTW 490
+ +G + + G+ D+ ++ + + G+LE A L N D +W
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATS----LMSMYSKCGELEIAEQLFI-NIEDRDVVSW 369
Query: 491 GSLLAACRVHGNVELGETAARHLLEI 516
+++A+ G + + R ++ I
Sbjct: 370 SAMIASYEQAGQHDEAISLFRDMMRI 395
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 183/314 (58%), Gaps = 7/314 (2%)
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
D + ++ Y K G++ A +LFD +PV +D ++W A++A A E +E++K +
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPV-RDVASWNALIAGLVSGNRASEAMELYKRM 201
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
I+ +EV +V A+ AC+ L D++ ++I G + +IVSNA I+M+SKCG +
Sbjct: 202 ETEGIRRSEVTVVAALGACSHLGDVKEG----ENIFHGYSNDNVIVSNAAIDMYSKCGFV 257
Query: 370 DLAWREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNA 428
D A++ F + + T++ MIT FA HG++ A+++F ++ G+KP+ V+++ L A
Sbjct: 258 DKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTA 317
Query: 429 CSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADAT 488
C +GLVE G F M +E +HY C+VDLL RAG+L A+ +I + D
Sbjct: 318 CRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPV 376
Query: 489 TWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMS 548
W SLL A ++ +VE+ E A+R + E+ + G +VLL+N+YA+Q +W V+ M
Sbjct: 377 LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDME 436
Query: 549 KKGIKKPSGYSWIQ 562
K +KK G S+I+
Sbjct: 437 SKQVKKIPGLSYIE 450
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 16/271 (5%)
Query: 70 NICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLP------SG 123
++ +A ++F +P P W ++IR F + +H S Y M Q
Sbjct: 52 DLSFAVQIFRYIPK-PLTNDWNAIIRGF-AGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 124 FTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDG 183
T S L AC R Q+H ++ + G + ++ T LL Y+K+G + A +FD
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNM---GERNSFTWTTMVAGYASC---GDMK 237
M RDV +W A+I G EA L+ M G R S T+VA +C GD+K
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRS--EVTVVAALGACSHLGDVK 227
Query: 238 AAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
+ ++ S+ + + A I Y K G V +A ++F+ + TW M+ +A +G
Sbjct: 228 EGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHG 287
Query: 298 YAKEGIEMFKEVRQAKIKITEVAMVGAISAC 328
A +E+F ++ IK +V+ + A++AC
Sbjct: 288 EAHRALEIFDKLEDNGIKPDDVSYLAALTAC 318
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 29/280 (10%)
Query: 55 SPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLS-HRAHFRHCISTYAR 113
S L +L+ S+ ++ A+KLFD MP D W +LI +S +RA + Y R
Sbjct: 144 SLLCTTLLDAYSKNGDLISAYKLFDEMP-VRDVASWNALIAGLVSGNRA--SEAMELYKR 200
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV-HGRLVQSGFGGNKIVQTALLGMYAKSG 172
M G+ S T + L AC + + EG+ + HG N IV A + MY+K G
Sbjct: 201 METEGIRRSEVTVVAALGACSHLGDVKEGENIFHGY-----SNDNVIVSNAAIDMYSKCG 255
Query: 173 CVCDARDVFDGMD-DRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMV 227
V A VF+ + VV W MI G+A A +FD + + + ++ +
Sbjct: 256 FVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAAL 315
Query: 228 AGYASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDA 283
G ++ +++ M+ +++ + ++ + G + EA + + + D
Sbjct: 316 TACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDP 375
Query: 284 STWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVG 323
W ++L E++ +V A+I E+ +G
Sbjct: 376 VLWQSLLG----------ASEIYSDVEMAEIASREIKEMG 405
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 254/475 (53%), Gaps = 37/475 (7%)
Query: 108 ISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGM 167
++ + ++H++ S TF+ VL AC + G+QVH +++ G I +TAL+ M
Sbjct: 69 LALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDM 128
Query: 168 YAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTW 223
Y+K G + D+ VF+ ++++D+V+W A++ G+ + EA +F M E + FT
Sbjct: 129 YSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTL 188
Query: 224 TTMVAGYASCGDMKAAKELYD--VMSDKDGVTW-VAMIAGYGKLGNVTEARRLFDGIPVP 280
+++V AS ++ K+++ V++ +D V AMI+ Y +G + EA ++++ + V
Sbjct: 189 SSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVH 248
Query: 281 QDASTWAAMLA-CYAQNGYAKEGIEMFKEVRQAKIKITEVA--------MVGAISACAQL 331
D ++++ C Y + + M ++ ++ + +A +G C L
Sbjct: 249 TDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVAL 308
Query: 332 RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMI 391
R+ +S++ + N L++M+ KCG I A F + + + ++++MI
Sbjct: 309 RNGFVSDSK--------------LCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 392 TAFAEHGKSQDAIDLFFRMPKE--GLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVF 449
A+A +G A+++F M +E G+ PN VTF+ V++AC+ +GLV+EG F +M +
Sbjct: 355 DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKY 414
Query: 450 DIEPLPEHYACIVDLLGRAGQLERAYSLIKE----NATSADATTWGSLLAACRVHGNVEL 505
+ P EHY C +D+L +AG+ E + L++ + S W ++L+AC ++ ++
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTR 474
Query: 506 GETAARHLL-EIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYS 559
GE AR L+ E PE++ YVL++N YA+ KW E ++ + KG+ K +G+S
Sbjct: 475 GEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 183/343 (53%), Gaps = 1/343 (0%)
Query: 219 NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIP 278
N F ++ Y C + A++L+D + ++ V W AMI+ Y G V EA L++ +
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMD 141
Query: 279 V-PQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMS 337
V P ++S A + + IE ++++ + + K + ++ +SAC+ + R+
Sbjct: 142 VMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLI 201
Query: 338 NALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEH 397
+ + + + + L+ + +CG+I F +M RD+ +S++I+A+A H
Sbjct: 202 KEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALH 261
Query: 398 GKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH 457
G ++ A+ F M + P+ + F+ VL ACS +GL +E +F+ M G + + +H
Sbjct: 262 GDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDH 321
Query: 458 YACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEID 517
Y+C+VD+L R G+ E AY +I+ A TWG+LL ACR +G +EL E AAR LL ++
Sbjct: 322 YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVE 381
Query: 518 PEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSW 560
PE+ YVLL +Y S + AE ++ M + G+K G SW
Sbjct: 382 PENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 176/440 (40%), Gaps = 86/440 (19%)
Query: 99 SHRAHFRHCISTYARMHQSGVLP-SGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGN 157
+++ + ++ + +MH S LP FS L +C V G VH V+S F N
Sbjct: 23 ANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSN 82
Query: 158 KIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGY---AKVAMMVEARWLFDN 214
V ALL MY K V AR +FD + R+ V W AMI Y KV VE D
Sbjct: 83 PFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDV 142
Query: 215 MGERNSF----------------------------------TWTTMVAGYASCGDMKAAK 240
M +SF T +V+ ++ G + K
Sbjct: 143 MPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIK 202
Query: 241 ELYDV----MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQN 296
E++ + + ++ YG+ G++ + +FD + +D W+++++ YA +
Sbjct: 203 EIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME-DRDVVAWSSLISAYALH 261
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
G A+ ++ F+E+ AK+ ++A + + AC+ G D L+
Sbjct: 262 GDAESALKTFQEMELAKVTPDDIAFLNVLKACSH---------------AGLADEALVYF 306
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
+ ++ +D YS ++ + G+ ++A + MP+ K
Sbjct: 307 KRMQG-------------DYGLRASKD--HYSCLVDVLSRVGRFEEAYKVIQAMPE---K 348
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRFFQIMT-GVFDIEPL-PEHYACIVDL---LGRAGQL 471
P T+ +L AC + G +E +I + +EP P +Y + + +GR +
Sbjct: 349 PTAKTWGALLGACRNYGEIE----LAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEA 404
Query: 472 ERAYSLIKENATS-ADATTW 490
ER +KE+ + ++W
Sbjct: 405 ERLRLKMKESGVKVSPGSSW 424
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 23/260 (8%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A +L++ M P+ + ++I+ + I Y +M + P+ T ++++AC
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ A K++H ++ + +++ L+ Y + G + + VFD M+DRDVVAW+
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 194 AMICGYAKVAMMVEARWLFDNM------GERNSFTWTTMVAGYASCGD-----MKAAKEL 242
++I YA A F M + +F +A D K +
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGD 312
Query: 243 YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
Y + + KD + ++ ++G EA ++ +P A TW A+L G
Sbjct: 313 YGLRASKD--HYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG----- 365
Query: 303 IEMFKEVRQAKIKITEVAMV 322
E+ A+I E+ MV
Sbjct: 366 -----EIELAEIAARELLMV 380
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 183/311 (58%), Gaps = 9/311 (2%)
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
+++ Y G V A ++F+ +P ++ +W AM++ +AQ ++++ ++R++
Sbjct: 160 SLVVLYRDSGEVENAYKVFEEMP-ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 316 ITEVAMVGAISAC---AQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLA 372
+ +SAC L R + T H+ L +SN+LI+M+ KCG++ A
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMG---LKSYLHISNSLISMYCKCGDLKDA 275
Query: 373 WREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLF-FRMPKEGLKPNQVTFIGVLNACSS 431
+R F +D+ ++++MI +A+HG + AI+LF MPK G KP+ +T++GVL++C
Sbjct: 276 FRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRH 335
Query: 432 SGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWG 491
+GLV+EG +FF +M ++P HY+C+VDLLGR G L+ A LI+ ++ WG
Sbjct: 336 AGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWG 394
Query: 492 SLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKG 551
SLL +CRVHG+V G AA L ++P+ + T+V LAN+YAS W A V+KLM KG
Sbjct: 395 SLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKG 454
Query: 552 IKKPSGYSWIQ 562
+K G SWI+
Sbjct: 455 LKTNPGCSWIE 465
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 136/265 (51%), Gaps = 14/265 (5%)
Query: 53 FLSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYA 112
+L L+ + S E N A+K+F+ MP + WT++I F + C+ Y+
Sbjct: 156 YLGSSLVVLYRDSGEVEN---AYKVFEEMPE-RNVVSWTAMISGF-AQEWRVDICLKLYS 210
Query: 113 RMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
+M +S P+ +TF+++L+AC A+ +G+ VH + + G + +L+ MY K G
Sbjct: 211 KMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCG 270
Query: 173 CVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER-----NSFTWTTMV 227
+ DA +FD ++DVV+W +MI GYA+ + ++A LF+ M + ++ T+ ++
Sbjct: 271 DLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVL 330
Query: 228 AGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDA 283
+ G +K ++ +++M++ + + ++ G+ G + EA L + +P+ ++
Sbjct: 331 SSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 284 STWAAMLACYAQNGYAKEGIEMFKE 308
W ++L +G GI +E
Sbjct: 391 VIWGSLLFSCRVHGDVWTGIRAAEE 415
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 45/236 (19%)
Query: 124 FTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDG 183
+ SS + +CG G H ++ GF + + ++L+ +Y SG V +A VF+
Sbjct: 121 YGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE 180
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWT--------------- 224
M +R+VV+WTAMI G+A+ + L+ M + N +T+T
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 225 --------------------TMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKL 264
++++ Y CGD+K A ++D S+KD V+W +MIAGY +
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 265 GNVTEARRLFDGIPVPQ-----DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
G +A LF+ + +P+ DA T+ +L+ G KEG + F + + +K
Sbjct: 301 GLAMQAIELFE-LMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLK 355
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 88/182 (48%), Gaps = 2/182 (1%)
Query: 320 AMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM 379
+ A+ +C RD R + +G + + ++L+ ++ G ++ A++ F M
Sbjct: 122 GLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEM 181
Query: 380 RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGC 439
R++ +++AMI+ FA+ + + L+ +M K PN TF +L+AC+ SG + +G
Sbjct: 182 PERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG- 240
Query: 440 RFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRV 499
R T ++ ++ + + G L+ A+ + + ++ D +W S++A
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIF-DQFSNKDVVSWNSMIAGYAQ 299
Query: 500 HG 501
HG
Sbjct: 300 HG 301
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 234/450 (52%), Gaps = 26/450 (5%)
Query: 130 LNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC--VCDARDVFDGMDDR 187
L C + ++ Q+HG++ S + + + L+ + + S + AR + D
Sbjct: 20 LKLCSSIKHLL---QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDS 76
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKEL- 242
W + GY+ VE+ W++ M R N T+ ++ AS + A +++
Sbjct: 77 TPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 243 YDVMS---DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYA 299
+V+ D D +I YG ++AR++FD + ++ +W +++ +NG
Sbjct: 137 VEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM-TERNVVSWNSIMTALVENGKL 195
Query: 300 KEGIEMFKEVRQAKIKITEVAMVGAISACA---QLRDIRMSNALTDHIEEGCCDRTLIVS 356
E F E+ + E MV +SAC L + S + +E C +
Sbjct: 196 NLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNC-----RLG 250
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG-L 415
AL++M++K G ++ A F M ++++T+SAMI A++G +++A+ LF +M KE +
Sbjct: 251 TALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 416 KPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAY 475
+PN VTF+GVL ACS +GLV++G ++F M + I+P+ HY +VD+LGRAG+L AY
Sbjct: 311 RPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAY 370
Query: 476 SLIKENATSADATTWGSLLAACRVHGNVE---LGETAARHLLEIDPEDSGTYVLLANMYA 532
IK+ DA W +LL+AC +H + + +GE + L+E++P+ SG V++AN +A
Sbjct: 371 DFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFA 430
Query: 533 SQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
W A V+++M + +KK +G S ++
Sbjct: 431 EARMWAEAAEVRRVMKETKMKKIAGESCLE 460
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 177/396 (44%), Gaps = 66/396 (16%)
Query: 53 FLSPLLLRVLNFSSEKSNICYAHKLF----DTMPNCPDAFIWTSLIRAFLSHRAHFRHCI 108
F+ L+RV + S K ++ +A L D+ P+ W L R + S + I
Sbjct: 46 FIISELVRVSSLSLAK-DLAFARTLLLHSSDSTPS-----TWNMLSRGYSSSDSPVE-SI 98
Query: 109 STYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMY 168
Y+ M + G+ P+ TF +L AC + G+Q+ +++ GF + V L+ +Y
Sbjct: 99 WVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLY 158
Query: 169 AKSGCVCDARDVFDGMDDRDVVAWTAMICGY---AKVAMMVEARWLFDNMGERNSFTWTT 225
DAR VFD M +R+VV+W +++ K+ ++ E + +G+R TT
Sbjct: 159 GTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFEC--FCEMIGKRFCPDETT 216
Query: 226 MVAGYASC-GDMKAAKELY-DVMSDKDGVTW---VAMIAGYGKLGNVTEARRLFDGIPVP 280
MV ++C G++ K ++ VM + + A++ Y K G + AR +F+ + V
Sbjct: 217 MVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERM-VD 275
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMF-KEVRQAKIKITEVAMVGAISACAQLRDIRMSNA 339
++ TW+AM+ AQ G+A+E +++F K ++++ ++ V +G + AC
Sbjct: 276 KNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC----------- 324
Query: 340 LTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRD-----MYTYSAMITAF 394
S G +D ++ F M M Y AM+
Sbjct: 325 ------------------------SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDIL 360
Query: 395 AEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACS 430
G+ +A D +MP E P+ V + +L+ACS
Sbjct: 361 GRAGRLNEAYDFIKKMPFE---PDAVVWRTLLSACS 393
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 220/416 (52%), Gaps = 14/416 (3%)
Query: 157 NKIVQTALLGMYAK-SGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM 215
N ++ + L+ Y+K + + VF M R++ +W +I +++ ++ LF M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 216 GER-----NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWV-----AMIAGYGKLG 265
+ FT ++ ++ + K+ +L V+ K G + A++ Y +G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSG-DLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 266 NVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAI 325
+ AR+LFD +PV +D+ + AM Y Q G A G+ MF+E+ + + V MV +
Sbjct: 184 KLLHARKLFDDMPV-RDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 326 SACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMY 385
AC QL ++ ++ C L + NA+ +M+ KC +D A F M RD+
Sbjct: 243 MACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVI 302
Query: 386 TYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM 445
++S++I + G + LF M KEG++PN VTF+GVL+AC+ GLVE+ +F++M
Sbjct: 303 SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM 362
Query: 446 TGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVEL 505
++I P +HYA + D + RAG LE A +++ D G++L+ C+V+GNVE+
Sbjct: 363 QE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEV 421
Query: 506 GETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
GE AR L+++ P + YV LA +Y++ ++ AE +++ M +K I K G S I
Sbjct: 422 GERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 162/422 (38%), Gaps = 72/422 (17%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARM-HQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
+ F W +I F S I + RM +S V P FT +L AC G
Sbjct: 97 NIFSWNIIIGEF-SRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDL 155
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
+H ++ GF + V +AL+ MY G + AR +FD M RD V +TAM GY +
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 205 MVEARWLFDNMGERN-SFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWV-------- 255
+ +F MG + MV+ +CG + A K K W
Sbjct: 216 AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKH------GKSVHGWCIRRCSCLG 269
Query: 256 -----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVR 310
A+ Y K + A +F + +D +W++++ Y +G ++F E+
Sbjct: 270 LNLGNAITDMYVKCSILDYAHTVFVNMS-RRDVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 311 QAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNID 370
+ I+ V +G +SACA G ++
Sbjct: 329 KEGIEPNAVTFLGVLSACAH-----------------------------------GGLVE 353
Query: 371 LAWREFSTMR----CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVL 426
+W F M+ ++ Y+++ + G ++A MP +KP++ VL
Sbjct: 354 KSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMP---VKPDEAVMGAVL 410
Query: 427 NACSSSGLVEEGCRFFQIMTGVFDIEPL-PEHYACIVDLLGRAGQLERAYSL---IKENA 482
+ C G VE G R + + ++P +Y + L AG+ + A SL +KE
Sbjct: 411 SGCKVYGNVEVGER---VARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQ 467
Query: 483 TS 484
S
Sbjct: 468 IS 469
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 16/276 (5%)
Query: 70 NICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSV 129
+ +A KLFD MP D+ ++T++ ++ + ++ + M SG S+
Sbjct: 184 KLLHARKLFDDMP-VRDSVLYTAMFGGYV-QQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 130 LNACGRVPAMVEGKQVHGRLVQ--SGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
L ACG++ A+ GK VHG ++ S G N + A+ MY K + A VF M R
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRRCSCLGLN--LGNAITDMYVKCSILDYAHTVFVNMSRR 299
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELY 243
DV++W+++I GY +V + LFD M E N+ T+ +++ A G ++ + +
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF 359
Query: 244 DVMSDKDGVTWVAMIAGYG----KLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYA 299
+M + + V + A + G + EA + + +PV D + A+L+ G
Sbjct: 360 RLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNV 419
Query: 300 KEGIEMFKEVRQAKIKITE--VAMVGAISACAQLRD 333
+ G + +E+ Q K + V + G SA + +
Sbjct: 420 EVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDE 455
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 236/465 (50%), Gaps = 14/465 (3%)
Query: 113 RMHQSGVLPSGFTFSSVLNACGRVPAMVE-GKQVHGR-LVQSGFGGNKIVQTALLGMYAK 170
M+ G +P +S+L C R+ + + + H LV + ++ TAL+ MY K
Sbjct: 138 EMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLK 197
Query: 171 SGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERN-SFTWTTMVAG 229
A VFD M+ ++ V+WTAMI G LF M N T+++
Sbjct: 198 FDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSV 257
Query: 230 YASCGDMKAAKELYDVMS--------DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQ 281
+C ++ L + D A + Y + GNV+ +R LF+ V +
Sbjct: 258 LPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKV-R 316
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
D W++M++ YA+ G E + + ++R+ I+ V ++ +SAC + ++ +
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQ 401
I + +++ NALI+M++KCG++ A F + +D+ ++S+MI A+ HG
Sbjct: 377 SQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGS 436
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI 461
+A+++F M K G + + + F+ +L+AC+ +GLVEE F G + + EHYAC
Sbjct: 437 EALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGKYHMPVTLEHYACY 495
Query: 462 VDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVEL-GETAARHLLEIDPED 520
++LLGR G+++ A+ + A W SLL+AC HG +++ G+ A L++ +P++
Sbjct: 496 INLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDN 555
Query: 521 SGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREI 565
YVLL+ ++ + AE V+++M ++ + K G+S I+ E+
Sbjct: 556 PANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPEL 600
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 198/411 (48%), Gaps = 33/411 (8%)
Query: 113 RMHQSGVLPSGFT--FSSVLNACG-RVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYA 169
++H G +GFT SV+ AC + + G Q+H +++G + +V +L+ MYA
Sbjct: 36 KIHSLGT--NGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYA 93
Query: 170 KSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAG 229
K R VFD M RD V++ ++I + ++ EA L M + +VA
Sbjct: 94 KFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVAS 153
Query: 230 -YASCGDMKAAKE---------LYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPV 279
A C M ++ + L D + + A++ Y K + A +FD + V
Sbjct: 154 LLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEV 213
Query: 280 PQDASTWAAMLA-CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSN 338
+ S W AM++ C A Y + G+++F+ +++ ++ V ++ + AC +L +
Sbjct: 214 KNEVS-WTAMISGCVANQNY-EMGVDLFRAMQRENLRPNRVTLLSVLPACVEL---NYGS 268
Query: 339 ALTDHIE-----EGC-CDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMIT 392
+L I GC D L + A + M+ +CGN+ L+ F T + RD+ +S+MI+
Sbjct: 269 SLVKEIHGFSFRHGCHADERL--TAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMIS 326
Query: 393 AFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF-QIMTGVFDI 451
+AE G + ++L +M KEG++ N VT + +++AC++S L+ QI+ F
Sbjct: 327 GYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMS 386
Query: 452 EPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGN 502
L + ++D+ + G L A + E T D +W S++ A +HG+
Sbjct: 387 HILLGN--ALIDMYAKCGSLSAAREVFYE-LTEKDLVSWSSMINAYGLHGH 434
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 110/236 (46%), Gaps = 10/236 (4%)
Query: 70 NICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSV 129
N+ + LF+T D +W+S+I + + ++ +M + G+ + T ++
Sbjct: 302 NVSLSRVLFET-SKVRDVVMWSSMISGY-AETGDCSEVMNLLNQMRKEGIEANSVTLLAI 359
Query: 130 LNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDV 189
++AC + VH ++++ GF + ++ AL+ MYAK G + AR+VF + ++D+
Sbjct: 360 VSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDL 419
Query: 190 VAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYDV 245
V+W++MI Y EA +F M E + + +++ G ++ A+ ++
Sbjct: 420 VSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ 479
Query: 246 MSDKDGVTWVAMIAGY----GKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG 297
+ A Y G+ G + +A + +P+ A W+++L+ +G
Sbjct: 480 AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHG 535
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 232/454 (51%), Gaps = 36/454 (7%)
Query: 139 MVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK----SGCVCD---ARDVFDGMDDRDVVA 191
M + KQ+H +++ + + A L +Y K S D A VFD +++
Sbjct: 61 MSQLKQLHAFTLRTTYPE----EPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFM 116
Query: 192 WTAMICGYAK-VAMMVEARWLFDNMGER-----NSFTWTTMVAGYASCGDMKAAKELY-- 243
W +I A V+ EA L+ M ER + T+ ++ A K+++
Sbjct: 117 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 176
Query: 244 DVMSDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKE 301
V G +V +I YG G + AR++FD +P + +W +M+ + G
Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP-ERSLVSWNSMIDALVRFGEYDS 235
Query: 302 GIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC---CDRTLIVSNA 358
+++F+E+ Q + M +SACA L + + + C ++V N+
Sbjct: 236 ALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 294
Query: 359 LINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM--PKEGLK 416
LI M+ KCG++ +A + F M+ RD+ +++AMI FA HG++++A++ F RM +E ++
Sbjct: 295 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 354
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYS 476
PN VTF+G+L AC+ G V +G ++F +M + IEP EHY CIVDL+ RAG + A
Sbjct: 355 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 414
Query: 477 LIKENATSADATTWGSLLAACRVHG-NVELGETAARHLLEIDPED-------SGTYVLLA 528
++ DA W SLL AC G +VEL E AR+++ ++ SG YVLL+
Sbjct: 415 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 474
Query: 529 NMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQ 562
+YAS +W +V+KLMS+ GI+K G S I+
Sbjct: 475 RVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIE 508
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 148/574 (25%), Positives = 252/574 (43%), Gaps = 87/574 (15%)
Query: 69 SNICYAHKLFDTMPNCP-DAFIWTSLIRAFLSHRAHFRHCISTYARMH---QSGVLPSGF 124
+N+ A +LF++ NC D + +L+ F I + MH + + F
Sbjct: 68 NNVKEARELFES-DNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
T ++++ ++ + G+Q+HG LV++G G K ++L+ MY+K G + ++F+G
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGS 186
Query: 185 ----------------------------------DDRDVVAWTAMICGYA---------- 200
+ D ++W +I GYA
Sbjct: 187 CVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALK 246
Query: 201 ------------------------------KVAMMVEARWLFDNMGERNSFTWTTMVAGY 230
K+ V AR L N N F + +V Y
Sbjct: 247 MAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVL-KNGSYSNKFVSSGIVDVY 305
Query: 231 ASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML 290
CG+MK A+ + + + + +MI GY G + EA+RLFD + ++ W AM
Sbjct: 306 CKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLS-EKNLVVWTAMF 364
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITE-VAMVGAISACAQLRDIRMSNALTDH-IEEGC 348
Y +E+ + + + + MV + AC+ + + H + G
Sbjct: 365 LGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI 424
Query: 349 C-DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLF 407
D+ L+ A ++M+SKCGN++ A R F + RD Y+AMI A HG + F
Sbjct: 425 LMDKKLVT--AFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHF 482
Query: 408 FRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGR 467
M + G KP+++TF+ +L+AC GLV EG ++F+ M ++I P HY C++DL G+
Sbjct: 483 EDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGK 542
Query: 468 AGQLERAYSLIKE-NATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVL 526
A +L++A L++ + DA G+ L AC + N EL + LL I+ + Y+
Sbjct: 543 AYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQ 602
Query: 527 LANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSW 560
+AN YAS +W + ++ M K ++ SG SW
Sbjct: 603 IANAYASSGRWDEMQRIRHQMRGKELEIFSGCSW 636
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 188/468 (40%), Gaps = 115/468 (24%)
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMM 205
H R ++SG + L+ +Y+KSG + +AR+VFD M +R+V +W A+I Y K +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 206 VEARWLFDNMG-ERNSFTWTTMVAGYASC-----------GDM----------------- 236
EAR LF++ ER+ T+ T+++G+A G+M
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 237 --KAAKELYDVM-----------SDKDGVTWV--AMIAGYGKLGNVTEARRLFDGIPVP- 280
K + +L +V + DG + ++I Y K G E +F+G V
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 281 QDASTWAAMLACY--------------------------------AQNGYAKEGIEMFKE 308
D+ AM+A Y AQNGY +E ++M
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 309 VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGN 368
+ + +K E + ++ + L+ +++ + + + VS+ +++++ KCGN
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 369 IDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLF--------------------F 408
+ A ++Y+ S+MI ++ GK +A LF
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 409 RMPKEGLK------------PNQVTFIGVLNACSSSGLVEEGCRF--FQIMTGVFDIEPL 454
R P L+ P+ + + VL ACS +E G + TG+ + L
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 455 PEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGN 502
VD+ + G +E A I +++ D + +++A C HG+
Sbjct: 431 V---TAFVDMYSKCGNVEYA-ERIFDSSFERDTVMYNAMIAGCAHHGH 474
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 15/261 (5%)
Query: 66 SEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFT 125
S + + A +LFD++ + +WT++ +L+ R A + P
Sbjct: 337 SSQGKMVEAKRLFDSLSE-KNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLV 395
Query: 126 FSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD 185
SVL AC M GK++HG +++G +K + TA + MY+K G V A +FD
Sbjct: 396 MVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSF 455
Query: 186 DRDVVAWTAMICGYAKVAMMVEARWLFDNMGE----RNSFTWTTMVAGYASCGDMKAAKE 241
+RD V + AMI G A ++ F++M E + T+ +++ G + ++
Sbjct: 456 ERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEK 515
Query: 242 LYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGI-PVPQDASTWAAMLACYAQ 295
+ M + ++ + MI YGK + +A L +GI V +DA A L +
Sbjct: 516 YFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSW 575
Query: 296 NGYAKEGIEMFKEVRQAKIKI 316
N + E+ KEV + + I
Sbjct: 576 N----KNTELVKEVEEKLLVI 592
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 153/555 (27%), Positives = 269/555 (48%), Gaps = 78/555 (14%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
VL S ++ A ++FD + N DA W ++I L + + + M SGV
Sbjct: 240 VLGMYSSCGDLESARRIFDCVNN-RDAVAWNTMIVGSLKND-KIEDGLMFFRNMLMSGVD 297
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P+ FT+S VLN C ++ + GK +H R++ S + + ALL MY G + +A V
Sbjct: 298 PTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYV 357
Query: 181 FDGMDDRDVVAWTAMICG-----YAKVAMMVEARWL------------------------ 211
F + + ++V+W ++I G + + AM++ R L
Sbjct: 358 FGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPER 417
Query: 212 ----------FDNMG-ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAG 260
+G ER+ F TT+++ Y + ++A++++DVM ++D V W MI G
Sbjct: 418 FVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVG 477
Query: 261 YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVA 320
+ +LGN A + F IEM++E ++ + +
Sbjct: 478 HSRLGNSELAVQFF----------------------------IEMYREKNRSD-GFSLSS 508
Query: 321 MVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMR 380
++GA S A LR + + L I G D + V AL++M+ K G + A FS
Sbjct: 509 VIGACSDMAMLRQGEVFHCLA--IRTGF-DCVMSVCGALVDMYGKNGKYETAETIFSLAS 565
Query: 381 CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCR 440
D+ +++M+ A+++HG + A+ F ++ + G P+ VT++ +L ACS G +G +
Sbjct: 566 NPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG-K 624
Query: 441 FFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSAD-ATTWGSLLAACRV 499
F I+ +HY+C+V+L+ +AG ++ A LI+++ + A W +LL+AC
Sbjct: 625 FLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVN 684
Query: 500 HGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVG-AEVVKKLMSKKGIKKPSGY 558
N+++G AA +L++DPED+ T++LL+N+YA +W AE+ +K+ K P G
Sbjct: 685 TRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDP-GL 743
Query: 559 SWIQREISRQQTADS 573
SWI+ + Q S
Sbjct: 744 SWIEVNNNNTQVFSS 758
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 236/493 (47%), Gaps = 20/493 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A K+FD MP+ + + +L A+ + + M V P+ TF+S++ C
Sbjct: 151 ARKVFDKMPH-RNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVC 209
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
+ ++ G ++ ++++ G+ N +VQT++LGMY+ G + AR +FD +++RD VAW
Sbjct: 210 AVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWN 269
Query: 194 AMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
MI G K + + F NM + FT++ ++ G + G K ++ +
Sbjct: 270 TMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVS 329
Query: 250 DGVTWV----AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
D + + A++ Y G++ EA +F I P S W ++++ ++NG+ ++ + M
Sbjct: 330 DSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVS-WNSIISGCSENGFGEQAMLM 388
Query: 306 FKE-VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
++ +R + + E AISA A+ L + + +R++ V L++M+
Sbjct: 389 YRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYF 448
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
K + A + F M+ RD+ ++ MI + G S+ A+ F M +E + + +
Sbjct: 449 KNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSS 508
Query: 425 VLNACSSSGLVEEGCRF--FQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
V+ ACS ++ +G F I TG FD + +VD+ G+ G+ E A ++ A
Sbjct: 509 VIGACSDMAMLRQGEVFHCLAIRTG-FDC--VMSVCGALVDMYGKNGKYETAETIFSL-A 564
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLE--IDPEDSGTYVLLANMYASQDKWVGA 540
++ D W S+L A HG VE + +LE P D+ TY+ L + + +
Sbjct: 565 SNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMP-DAVTYLSLLAACSHRGSTLQG 623
Query: 541 EVVKKLMSKKGIK 553
+ + M ++GIK
Sbjct: 624 KFLWNQMKEQGIK 636
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 173/379 (45%), Gaps = 22/379 (5%)
Query: 69 SNICYAHKLFDTMPNCPDAFIW-TSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFS 127
S++ A K+FD MP ++ S + ++S + I +P S
Sbjct: 36 SSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPLNEIAS 95
Query: 128 SVLN---ACGRVPAMVEGKQVHGRLVQSGFGG---NKIVQTALLGMYAKSGCVCDARDVF 181
SV+ C + + +Q+H ++ +G G + L+ MY + G + AR VF
Sbjct: 96 SVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVF 155
Query: 182 DGMDDRDVVAWTAMICGY------AKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGD 235
D M R+VV++ A+ Y A A + F+ + + NS T+T++V A D
Sbjct: 156 DKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV-KPNSSTFTSLVQVCAVLED 214
Query: 236 MKAAKELYDVM-----SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAML 290
+ L + SD + V +++ Y G++ ARR+FD + +DA W M+
Sbjct: 215 VLMGSSLNSQIIKLGYSD-NVVVQTSVLGMYSSCGDLESARRIFDCVN-NRDAVAWNTMI 272
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
+N ++G+ F+ + + + T+ ++ C++L + + I
Sbjct: 273 VGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL 332
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
L + NAL++M+ CG++ A+ F + ++ +++++I+ +E+G + A+ ++ R+
Sbjct: 333 ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL 392
Query: 411 PKEGL-KPNQVTFIGVLNA 428
+ +P++ TF ++A
Sbjct: 393 LRMSTPRPDEYTFSAAISA 411
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 129/289 (44%), Gaps = 24/289 (8%)
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAK--- 313
+I+ Y + ++ +AR++FD +P ++ T + A + Y G + ++ +
Sbjct: 28 LISMYVRCSSLEQARKVFDKMP-QRNIVTLFGLSAVFE---YVSMGSSLHSQIIKLGSFQ 83
Query: 314 ----IKITEVA--MVGAISACAQ---LRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+ + E+A +V C L+ R +AL G + +N LI+M+
Sbjct: 84 MIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYV 143
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGK-SQDAIDLFFRMPKEGLKPNQVTFI 423
+CG+++ A + F M R++ +Y+A+ +A++ + + A L M E +KPN TF
Sbjct: 144 RCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFT 203
Query: 424 GVLNACSSSGLVEEGCRF-FQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
++ C+ V G QI+ + + + ++ + G LE A + +
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQ--TSVLGMYSSCGDLESARRIF-DCV 260
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLE--IDPEDSGTYVLLAN 529
+ DA W +++ + +E G R++L +DP TY ++ N
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQF-TYSIVLN 308
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 217/450 (48%), Gaps = 43/450 (9%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
D W ++I A + + + M + G P+ T+ SVL V + G+Q+
Sbjct: 280 DIVSWNAIICATAKSENPLK-ALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI 338
Query: 146 HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAK---- 201
HG L+++G ++ AL+ YAK G + D+R FD + D+++V W A++ GYA
Sbjct: 339 HGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGP 398
Query: 202 -----------------------------VAMMVEARWLFDNMG-ERNSFTWTTMVAGYA 231
V + + + MG E N + ++++ YA
Sbjct: 399 ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Query: 232 SCGDMKAAKELYDVMSDKDGVTWVAMIAG-YGKLGNVTEARRLFDGIPVPQDASTWAAML 290
M A L D S V + ++AG Y + G E+ +L + P D +W +
Sbjct: 459 KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQP-DTVSWNIAI 517
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEE---G 347
A +++ Y +E IE+FK + Q+ I+ + V +S C++L D+ + +++ I +
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFS 577
Query: 348 CCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLF 407
C D V N LI+M+ KCG+I + F R +++ T++A+I+ HG Q+A++ F
Sbjct: 578 CADT--FVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 408 FRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGR 467
G KP++V+FI +L AC G+V+EG FQ M + +EP +HY C VDLL R
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLAR 694
Query: 468 AGQLERAYSLIKENATSADATTWGSLLAAC 497
G L+ A LI+E ADA W + L C
Sbjct: 695 NGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 180/394 (45%), Gaps = 44/394 (11%)
Query: 128 SVLNACGRVPAMVEGKQVHGR-------LVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
S+LN C + P+ K +H L+Q + N I+ +Y K G V A V
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIIS-----LYEKLGEVSLAGKV 71
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCG--DMKA 238
FD M +R+ V++ +I GY+K + +A +F M + V+G SC D++A
Sbjct: 72 FDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRA 131
Query: 239 AKELYDV-----MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACY 293
+L+ + + D ++ YG+L + A ++F+ +P + TW M++
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF-KSLETWNHMMSLL 190
Query: 294 AQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTL 353
G+ KE + F+E+ + +TE + +G + + ++D+ +S L + D +
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 354 IVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE 413
V N+LI+ + KCGN +A R F D+ +++A+I A A+ A+ LF MP+
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 414 GLKPNQVTFIGVLNACS-----SSG------LVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
G PNQ T++ VL S S G L++ GC TG+ L + YA
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE-----TGIVLGNALIDFYA--- 362
Query: 463 DLLGRAGQLERAYSLIKENATSADATTWGSLLAA 496
+ G LE + L + + W +LL+
Sbjct: 363 ----KCGNLEDS-RLCFDYIRDKNIVCWNALLSG 391
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 201/470 (42%), Gaps = 53/470 (11%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++F+ MP W ++ + L HR + C+ + + + G + +F VL
Sbjct: 168 AEQVFEDMPF-KSLETWNHMM-SLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGV 225
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
V + KQ+H + G V +L+ Y K G A +F D+V+W
Sbjct: 226 SCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 194 AMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
A+IC AK ++A LF +M E N T+ + V G +S + + M K
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVS-VLGVSSLVQLLSCGRQIHGMLIK 344
Query: 250 DG-----VTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG-- 302
+G V A+I Y K GN+ ++R FD I ++ W A+L+ YA K+G
Sbjct: 345 NGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR-DKNIVCWNALLSGYAN----KDGPI 399
Query: 303 -IEMFKEVRQAKIKITEVAMVGAISACA-----QLRD--IRMSNALTDHI---------- 344
+ +F ++ Q + TE A+ +C QL +RM D++
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 345 EEGCCDRTLIVS-----------NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITA 393
+ D L++ N + ++S+ G + + ST+ D +++ I A
Sbjct: 460 NQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAA 519
Query: 394 FAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEP 453
+ ++ I+LF M + ++P++ TF+ +L+ CS + G ++T D
Sbjct: 520 CSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKT-DFS- 577
Query: 454 LPEHYAC--IVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
+ + C ++D+ G+ G + R+ + E + TW +L++ +HG
Sbjct: 578 CADTFVCNVLIDMYGKCGSI-RSVMKVFEETREKNLITWTALISCLGIHG 626
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 251/499 (50%), Gaps = 24/499 (4%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A LFD MP D W S+I + + + M + V+ ++++++N C
Sbjct: 85 ALNLFDEMP-VRDVVSWNSMISGCVEC-GDMNTAVKLFDEMPERSVV----SWTAMVNGC 138
Query: 134 GRVPAMVEGKQVHGRL-VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
R + + +++ ++ V+ N +V Y + G V DA +F M ++V++W
Sbjct: 139 FRSGKVDQAERLFYQMPVKDTAAWNSMVHG-----YLQFGKVDDALKLFKQMPGKNVISW 193
Query: 193 TAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVMSD 248
T MICG + EA LF NM + S +T ++ A+ +++ ++
Sbjct: 194 TTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII- 252
Query: 249 KDGVTW-----VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGI 303
K G + ++I Y + ++R++FD V + + W A+L+ Y+ N ++ +
Sbjct: 253 KLGFLYEEYVSASLITFYANCKRIGDSRKVFDE-KVHEQVAVWTALLSGYSLNKKHEDAL 311
Query: 304 EMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMH 363
+F + + I + +++C+ L + + + + V N+L+ M+
Sbjct: 312 SIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMY 371
Query: 364 SKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFI 423
S GN++ A F + + + +++++I A+HG+ + A +F +M + +P+++TF
Sbjct: 372 SDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFT 431
Query: 424 GVLNACSSSGLVEEGCRFFQIMT-GVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENA 482
G+L+ACS G +E+G + F M+ G+ I+ +HY C+VD+LGR G+L+ A LI+
Sbjct: 432 GLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV 491
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEV 542
+ W +LL+ACR+H +V+ GE AA + +D + S YVLL+N+YAS +W
Sbjct: 492 VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSK 551
Query: 543 VKKLMSKKGIKKPSGYSWI 561
++ M K GI K G SW+
Sbjct: 552 LRVKMKKNGIMKKPGSSWV 570
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 163/359 (45%), Gaps = 38/359 (10%)
Query: 176 DARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGD 235
+AR+VF+ + V +T MI GY + +V+A LFD M R+ +W +M++G CGD
Sbjct: 53 EAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGD 112
Query: 236 MKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDAS----------- 284
M A +L+D M ++ V+W AM+ G + G V +A RLF +PV A+
Sbjct: 113 MNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQF 172
Query: 285 -------------------TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAI 325
+W M+ QN + E +++FK + + IK T I
Sbjct: 173 GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVI 232
Query: 326 SACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMY 385
+ACA M + I + VS +LI ++ C I + + F +
Sbjct: 233 TACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVA 292
Query: 386 TYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM 445
++A+++ ++ + K +DA+ +F M + + PNQ TF LN+CS+ G ++ G + M
Sbjct: 293 VWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG----KEM 348
Query: 446 TGV---FDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHG 501
GV +E +V + +G + A S+ + +W S++ C HG
Sbjct: 349 HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK-IFKKSIVSWNSIIVGCAQHG 406
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 255/502 (50%), Gaps = 17/502 (3%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A KLFD M D W+ +IR+++ + +H++ P T +SVL AC
Sbjct: 178 ARKLFDEMSE-RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 134 GRVPAMVEGKQVHGRLVQSGFG-GNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
+ + G+ VHG ++ GF + V +L+ MY+K V A VFD R++V+W
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 193 TAMICGYAKVAMMVEARWLFDNM-GERNSFTWTTMVAGYASCGDMK---AAKELYDVM-- 246
+++ G+ EA +F M E T+V+ C + K ++ V+
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 247 --SDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIE 304
+ + V ++I Y V +A + D + +D + + M++ A G + E I
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTY-KDVVSCSTMISGLAHAGRSDEAIS 415
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+F +R IT ++++ A S A LR + ++ + I + V ++++ ++
Sbjct: 416 IFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIA--IRRSLAINDISVGTSIVDAYA 473
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
KCG I++A R F + +++ +++ +I+A+A +G A+ LF M ++G PN VT++
Sbjct: 474 KCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLA 533
Query: 425 VLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE--NA 482
L+AC+ GLV++G F+ M D +P +HY+CIVD+L RAG+++ A LIK
Sbjct: 534 ALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPED 592
Query: 483 TSADATTWGSLLAACRVH-GNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAE 541
A A+ WG++L+ CR + + +LE++P S Y+L ++ +A++ W
Sbjct: 593 VKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVA 652
Query: 542 VVKKLMSKKGIKKPSGYSWIQR 563
++++L+ ++ ++ +GYS ++
Sbjct: 653 MMRRLVKERKVRVVAGYSMVRE 674
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 201/468 (42%), Gaps = 64/468 (13%)
Query: 104 FRHCISTYARMHQSGV-LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQT 162
+R +S Y+ + ++GV F F V AC ++ + F GN I
Sbjct: 25 WREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWL--------------FQGNSIAD- 69
Query: 163 ALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ER 218
Y K G +C FD M+ RD V+W ++ G E W F + E
Sbjct: 70 ----FYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEP 125
Query: 219 NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWV--AMIAGYGKLGNVTEARRLFDG 276
N+ T ++ S Y + S G++ V +++ Y +++ AR+LFD
Sbjct: 126 NTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDE 184
Query: 277 IPVPQDASTWAAMLACYAQNGYAKEGIEMFKE-VRQAKIKITEVAMVGAISACAQLRDIR 335
+ +D +W+ ++ Y Q+ G+++FKE V +AK + V + + AC + DI
Sbjct: 185 MS-ERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDID 243
Query: 336 MSNALTD-HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAF 394
+ ++ I G + V N+LI+M+SK ++D A+R F CR++ ++++++ F
Sbjct: 244 VGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGF 303
Query: 395 AEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNAC------------------------- 429
+ + +A+++F M +E ++ ++VT + +L C
Sbjct: 304 VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNE 363
Query: 430 -SSSGLVE--EGCRFFQIMTGVFDIEPLPEHYAC--IVDLLGRAGQLERAYSLIKENATS 484
+ S L++ C V D + +C ++ L AG+ + A S+ +
Sbjct: 364 VALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT 423
Query: 485 ADATTWGSLLAACRVHGNVELGE----TAARHLLEIDPEDSGTYVLLA 528
+A T SLL AC V ++ + A R L I+ GT ++ A
Sbjct: 424 PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDA 471
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 242/511 (47%), Gaps = 58/511 (11%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAF----LSHRAH--FRHCISTYARMHQSGVLPSGFTFS 127
A LF T + D W S+I AF +H+A F+ +S Y+ S F+ S
Sbjct: 448 AELLFKTTTH-RDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYS--------CSKFSLS 498
Query: 128 SVL---NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
+VL +C +++ GK VH L + G + +A L + S
Sbjct: 499 TVLAILTSCDSSDSLIFGKSVHCWLQKLG-----DLTSAFLRLETMS------------- 540
Query: 185 DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFT--WTTMVAGYASCGDMK----- 237
+ RD+ +W ++I G A +E+ F M T++ ++ G++
Sbjct: 541 ETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG 600
Query: 238 ------AAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
A K L ++ D +I YG+ ++ A ++F I P + +W +++
Sbjct: 601 RCFHGLAIKSLREL----DTQLQNTLITMYGRCKDIESAVKVFGLISDP-NLCSWNCVIS 655
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDR 351
+QN K G E+F+ R K++ E+ VG +SA QL H+
Sbjct: 656 ALSQN---KAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQA 712
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
VS AL++M+S CG ++ + F + ++++I+A HG + A++LF +
Sbjct: 713 NPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELS 772
Query: 412 KEG-LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQ 470
++PN+ +FI +L+ACS SG ++EG +++ M F ++P+ EH IVD+LGRAG+
Sbjct: 773 SNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGK 832
Query: 471 LERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANM 530
L AY I A WG+LL+AC HG+ +LG+ A L E++P+++ Y+ LAN
Sbjct: 833 LREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANT 892
Query: 531 YASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
Y W A ++K++ +KK GYS I
Sbjct: 893 YVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 923
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 203/460 (44%), Gaps = 43/460 (9%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV 119
++L F + + LFD + D +W S+I A L+ + + + M G
Sbjct: 127 KLLTFYGRTGELVSSSCLFDELKE-KDVIVWNSMITA-LNQNGRYIAAVGLFIEMIHKGN 184
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
T +A + + +H +++G G+ + AL+ +YAK + A
Sbjct: 185 EFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAEC 244
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGD 235
VF M+ RD+V+W ++ ++ F +M E ++ T++ +++ +S +
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE 304
Query: 236 MKAAKELYDVMSDKDGVTWVA-------MIAGYGKLGNVTEARRLFDGIPVPQDASTWAA 288
+ + L+ ++ K G + A +I+ Y K G+ A +F+ + V +D + A
Sbjct: 305 LTLGESLHGLVI-KSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VCRDVISSNA 362
Query: 289 MLACYAQNGYAKEGIEMFKEVRQA-KIKITEVAMVGAISACAQL---RDIRMSNALTDHI 344
+L +A NG +E + +++ KI+ +V S C L R+ R + T +
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRM 422
Query: 345 EEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAI 404
E R L V N++I+M+ KCG A F T RD+ ++++MI+AF+++G + A
Sbjct: 423 EMQ--SRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAK 480
Query: 405 DLFFRMPKE--GLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
+LF + E K + T + +L +C SS D + C
Sbjct: 481 NLFKEVVSEYSCSKFSLSTVLAILTSCDSS-----------------DSLIFGKSVHC-- 521
Query: 463 DLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGN 502
L + G L A+ ++ + + D T+W S+++ C G+
Sbjct: 522 -WLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 560
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 176/371 (47%), Gaps = 15/371 (4%)
Query: 143 KQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKV 202
+ VH ++ G + + LL Y ++G + + +FD + ++DV+ W +MI +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 203 AMMVEARWLFDNMGER-NSFTWTTMVAGYASCGDMKAAKE--LYDVMSDKDGVTW----- 254
+ A LF M + N F TT++ ++ + +++ + ++ + G+
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 255 VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
A++ Y K N++ A +F + +D +W ++ NG+ ++ ++ FK + +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHME-HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 315 KITEVAMVGAISACAQLRDIRMSNALTDH-IEEGCCDRTLI-VSNALINMHSKCGNIDLA 372
+ V ISAC+ + ++ + +L I+ G + V N++I+M+SKCG+ + A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 373 WREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPK-EGLKPNQVTFIGVLNACSS 431
F + CRD+ + +A++ FA +G ++A + +M + ++P+ T + + + C
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 432 SGLVEEGCRFFQIMTGVFDIEPLP-EHYACIVDLLGRAGQLERAYSLIKENATSADATTW 490
EG R T +++ E ++D+ G+ G +A L K T D +W
Sbjct: 406 LSFSREG-RAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFK-TTTHRDLVSW 463
Query: 491 GSLLAACRVHG 501
S+++A +G
Sbjct: 464 NSMISAFSQNG 474
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/539 (25%), Positives = 257/539 (47%), Gaps = 58/539 (10%)
Query: 76 KLFDTMPNCPDAFIW----TSLIRAFLSHRAHFRHCISTYARMHQ-SGVLPSGFTFSSVL 130
KLFD +P D W +SL++ SH+A + M++ G FT S++L
Sbjct: 239 KLFDEIPQ-RDVASWNTVVSSLVKEGKSHKA-----FDLFYEMNRVEGFGVDSFTLSTLL 292
Query: 131 NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
++C ++ G+++HGR ++ G V AL+G Y+K + +++ M +D V
Sbjct: 293 SSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAV 352
Query: 191 AWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGD-MKAAKELYDVMSDK 249
+T MI Y M+ A +F N+ E+N+ T+ ++AG+ G +KA K D++
Sbjct: 353 TFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRG 412
Query: 250 DGVTWVAMIAGYGKLGNVTE--------------------------------------AR 271
+T ++ + G V+E A
Sbjct: 413 VELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAE 472
Query: 272 RLFDGIPVPQDAS-TWAAMLACYAQNGYAKEGIEMF-KEVRQAKIKITEVAMVGAISACA 329
+FD P D+S +++ YA+NG + + +F + + + K+ + EV++ ++ C
Sbjct: 473 EMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCG 532
Query: 330 QLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSA 389
L M + + + + + N+LI+M++KC + D A + F+TMR D+ ++++
Sbjct: 533 TLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNS 592
Query: 390 MITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNA---CSSSGLVEEGCR-FFQIM 445
+I+ + +A+ L+ RM ++ +KP+ +T V++A S+ L CR F M
Sbjct: 593 LISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKL--SSCRDLFLSM 650
Query: 446 TGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVEL 505
++DIEP EHY V +LG G LE A I + + +LL +CR+H N +
Sbjct: 651 KTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSV 710
Query: 506 GETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQRE 564
+ A+ +L PE Y+L +N+Y++ W +E++++ M ++G +K SWI E
Sbjct: 711 AKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHE 769
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 185/406 (45%), Gaps = 60/406 (14%)
Query: 85 PDAFIWTSLIRAFLSHRAHFR-HCISTYARMHQSGVL-PSGFTFSSVLNACGRVPAMVEG 142
P +T+LI F R + + + RM ++G++ P+ +TF ++L AC RV G
Sbjct: 143 PTVVSYTALISGF--SRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
Query: 143 KQVHGRLVQSGFGGNKIVQTALLGMYAK-SGCVC-DARDVFDGMDDRDVVAWTAMICGYA 200
Q+HG +V+SGF + V +L+ +Y K SG C D +FD + RDV +W ++
Sbjct: 201 IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV 260
Query: 201 KVAMMVEARWLFDNMGE-----RNSFTWTTMVAG-------------------------- 229
K +A LF M +SFT +T+++
Sbjct: 261 KEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQEL 320
Query: 230 ---------YASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVP 280
Y+ DMK + LY++M +D VT+ MI Y G V A +F +
Sbjct: 321 SVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV-TE 379
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL 340
++ T+ A++A + +NG+ + +++F ++ Q +++T+ ++ A+ AC + + ++S +
Sbjct: 380 KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQI 439
Query: 341 TDHIEEGCCDR-----TLIVSNALINMHSKCGNIDLAWREFS--TMRCRDMYTYSAMITA 393
G C + + AL++M ++C + A F +++I
Sbjct: 440 -----HGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGG 494
Query: 394 FAEHGKSQDAIDLFFR-MPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
+A +G A+ LF R + ++ L ++V+ +L C + G E G
Sbjct: 495 YARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 132/295 (44%), Gaps = 17/295 (5%)
Query: 163 ALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG-----E 217
AL+ Y K G +A VF + VV++TA+I G++++ + +EA +F M +
Sbjct: 119 ALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQ 178
Query: 218 RNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWV----AMIAGYGKLGNVT--EAR 271
N +T+ ++ +++ ++ + V ++++ Y K + +
Sbjct: 179 PNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL 238
Query: 272 RLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAK-IKITEVAMVGAISACAQ 330
+LFD IP +D ++W +++ + G + + ++F E+ + + + + +S+C
Sbjct: 239 KLFDEIP-QRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 331 LRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAM 390
+ L + L V+NALI +SK ++ + M +D T++ M
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 391 ITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM 445
ITA+ G A+++F + ++ N +T+ ++ +G + + F M
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEK----NTITYNALMAGFCRNGHGLKALKLFTDM 408
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 329 AQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYS 388
AQ D+ ++ A+ + ++T + NALI+ + K G A F ++ + +Y+
Sbjct: 91 AQYHDVEVTKAVHASFLKLREEKTRL-GNALISTYLKLGFPREAILVFVSLSSPTVVSYT 149
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEGL-KPNQVTFIGVLNAC 429
A+I+ F+ +A+ +FFRM K GL +PN+ TF+ +L AC
Sbjct: 150 ALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTAC 191
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 152/605 (25%), Positives = 259/605 (42%), Gaps = 107/605 (17%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
+LN +K + A LFD MP D +W +LI + S + + M Q G
Sbjct: 91 LLNLYLKKGCVTSAQMLFDEMPE-RDTVVWNALICGY-SRNGYECDAWKLFIVMLQQGFS 148
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALL--------------- 165
PS T ++L CG+ + +G+ VHG +SG + V+ AL+
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 166 ----------------GMYAKSGCVCDARDVFDGMDDR---------------------- 187
G Y++SG +A VF M ++
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL 268
Query: 188 -----------DVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDM 236
D+ T+++C Y++ +V A L+ + + + T++V+ YA GDM
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 237 KAAKELY----DVMSDKDGVTWVAMIAG-------------------------------- 260
A + + D V V ++ G
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGL 388
Query: 261 ---YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKIT 317
Y K +V LF+ + +W ++++ Q+G A E+F ++ +
Sbjct: 389 ITMYSKFDDVETVLFLFEQLQ-ETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLP 447
Query: 318 EVAMVGAISA-CAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF 376
+ + ++ A C+QL + + L + + V ALI+M++KCGN A F
Sbjct: 448 DAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVF 507
Query: 377 STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
+++ T+++MI+ ++ G A+ + M ++GLKP+++TF+GVL+AC+ G V+
Sbjct: 508 KSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVD 567
Query: 437 EGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAA 496
EG F+ M F I P +HYA +V LLGRA A LI + D+ WG+LL+A
Sbjct: 568 EGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSA 627
Query: 497 CRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPS 556
C +H +E+GE AR + +D ++ G YVL++N+YA++ W V+ +M G
Sbjct: 628 CIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYL 687
Query: 557 GYSWI 561
G S I
Sbjct: 688 GVSQI 692
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 221/503 (43%), Gaps = 67/503 (13%)
Query: 108 ISTYARMHQSGVLPSGFTFSSVLNACGRV--PAMVEGKQVHGRLVQSGFGGNKIVQTALL 165
I+ + + +S + P+ FT S L A ++ +QV L +SG V+T+LL
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 166 GMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSF 221
+Y K GCV A+ +FD M +RD V W A+ICGY++ +A LF M ++ ++
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSAT 152
Query: 222 TWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGI 277
T ++ CG + + ++ V + + D A+I+ Y K + A LF +
Sbjct: 153 TLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREM 212
Query: 278 PVPQDAST--WAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQ---LR 332
+D ST W M+ Y+Q+G +E I +FK + + ++I+ V ++ +SA L
Sbjct: 213 ---KDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLH 269
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMIT 392
+ + + + I V +L+ +S+CG + A R +++ + + +++++
Sbjct: 270 CLVVKCGMVNDIS---------VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVS 320
Query: 393 AFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS-------------------- 432
+AE G A+ F + + +K + V +G+L+ C S
Sbjct: 321 CYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCT 380
Query: 433 ------GLVEEGCRFFQIMTGVFDIEPLPE----HYACIVDLLGRAGQLERAYSLIKENA 482
GL+ +F + T +F E L E + ++ ++G+ A+ + +
Sbjct: 381 KTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMM 440
Query: 483 TSA----DATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSG-TYVLLANMYASQDKW 537
+ DA T SLLA C + LG+ + L + E+ L +MYA
Sbjct: 441 LTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNE 500
Query: 538 VGAEVVKKLMSKKGIKKPSGYSW 560
V AE V K IK P +W
Sbjct: 501 VQAESV-----FKSIKAPCTATW 518
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 190/323 (58%), Gaps = 9/323 (2%)
Query: 246 MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEM 305
+SD T V I KL + +AR++FD IP P D W ++ Y + G EG+E+
Sbjct: 149 LSDSHVQTGVLRIYVEDKL--LLDARKVFDEIPQP-DVVKWDVLMNGYVRCGLGSEGLEV 205
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC-CDRTLIVSNALINMHS 364
F+E+ ++ E ++ A++ACAQ+ + + + +++ + + V AL++M++
Sbjct: 206 FREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYA 265
Query: 365 KCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE-GLKPNQVTFI 423
KCG I+ A F + R++++++A+I +A +G ++ A+ R+ +E G+KP+ V +
Sbjct: 266 KCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLL 325
Query: 424 GVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT 483
GVL AC+ G +EEG + M ++I P EHY+CIVDL+ RAG+L+ A +LI++
Sbjct: 326 GVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPM 385
Query: 484 SADATTWGSLLAACRVHGNVELGETAARHLLEIDP----EDSGTYVLLANMYASQDKWVG 539
A+ WG+LL CR H NVELGE A ++LL+++ E+ V L+N+Y S +
Sbjct: 386 KPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPE 445
Query: 540 AEVVKKLMSKKGIKKPSGYSWIQ 562
A V+ ++ ++G++K G+S ++
Sbjct: 446 ASKVRGMIEQRGVRKTPGWSVLE 468
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 181/400 (45%), Gaps = 52/400 (13%)
Query: 54 LSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTY-- 111
+S LL L+ + + YA +FD++ P++F++ ++IR + R+ H Y
Sbjct: 46 ISKLLTAFLHLPNLNKHFHYASSIFDSI-EIPNSFVYDTMIR--ICSRSSQPHLGLRYFL 102
Query: 112 --ARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSG-FGGNKIVQTALLGMY 168
+ + + PS TF ++ AC + GKQ+H +V++G F + VQT +L +Y
Sbjct: 103 LMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIY 162
Query: 169 AKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWT 224
+ + DAR VFD + DVV W ++ GY + + E +F M E + F+ T
Sbjct: 163 VEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVT 222
Query: 225 TMVAGYASCGDMKAAKELYDVMSDK-----DGVTWVAMIAGYGKLGNVTEARRLFDGIPV 279
T + A G + K +++ + K D A++ Y K G + A +F +
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-T 281
Query: 280 PQDASTWAAMLACYAQNGYAKEGIEMFKEV-RQAKIKITEVAMVGAISACAQLRDIRMSN 338
++ +WAA++ YA GYAK+ + + + R+ IK V ++G ++ACA
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAH-------- 333
Query: 339 ALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHG 398
+EEG + L NM ++ E + YS ++ G
Sbjct: 334 --GGFLEEG--------RSMLENMEAR--------YEITPKH----EHYSCIVDLMCRAG 371
Query: 399 KSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
+ DA++L +MP +KP + +LN C + VE G
Sbjct: 372 RLDDALNLIEKMP---MKPLASVWGALLNGCRTHKNVELG 408
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 260/532 (48%), Gaps = 52/532 (9%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A K+ D MP A + ++ + L R + SG + T +SVL C
Sbjct: 85 ALKVLDEMPERGIASVNAAV--SGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
G + G Q+H ++SGF V T+L+ MY++ G A +F+ + + VV +
Sbjct: 143 GDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYN 199
Query: 194 AMICGYAKVAMMVEARWLFDNMGE-----------------------------------R 218
A I G + +M +F+ M + +
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 219 NSFTWTTMVAG-----YASCGDMKAAKELYDVMSD-KDGVTWVAMIAGYGKLGNVTEARR 272
F + TMV Y+ C K+A ++ + D ++ ++W ++I+G G A
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 273 LFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACA 329
LF+ + + D++TW ++++ ++Q G E + F+ + + + + +SAC+
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACS 379
Query: 330 QLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM--RCRDMYTY 387
+ ++ + H+ + +R + V +LI+M+ KCG A R F + +D +
Sbjct: 380 DIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFW 439
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTG 447
+ MI+ + +HG+ + AI++F + +E ++P+ TF VL+ACS G VE+G + F++M
Sbjct: 440 NVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Query: 448 VFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGE 507
+ +P EH C++DLLGR+G+L A +I + + ++ + SLL +CR H + LGE
Sbjct: 500 EYGYKPSTEHIGCMIDLLGRSGRLREAKEVI-DQMSEPSSSVYSSLLGSCRQHLDPVLGE 558
Query: 508 TAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYS 559
AA L E++PE+ +V+L+++YA+ ++W E +++++ +K + K G S
Sbjct: 559 EAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 182/356 (51%), Gaps = 20/356 (5%)
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P+ FTF +L +C ++ +V+G+ +H ++V++GF + TAL+ MY K V DA V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 181 FDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDM 236
D M +R + + A + G + +A +F + NS T +++ G CGD+
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGG---CGDI 145
Query: 237 KAAKELYDVMSDKDGVTW-----VAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
+ +L+ ++ K G ++++ Y + G A R+F+ +P + T+ A ++
Sbjct: 146 EGGMQLH-CLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNAFIS 203
Query: 292 CYAQNGYAKEGIEMFKEVRQ-AKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
+NG +F +R+ + + +V V AI+ACA L +++ L + +
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMR-CRDMYTYSAMITAFAEHGKSQDAIDLFFR 409
+V ALI+M+SKC A+ F+ ++ R++ +++++I+ +G+ + A++LF +
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 410 MPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLL 465
+ EGLKP+ T+ +++ S G V E +FF+ M V + L C+ LL
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSL----KCLTSLL 375
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 241/485 (49%), Gaps = 54/485 (11%)
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
S V P G F S+L + +++ KQ+H +LV +G N + L+G Y
Sbjct: 2 SSVFP-GPRFLSLLQQNSK--TLIQAKQIHAQLVINGCHDNSLFG-KLIGHYCSKPSTES 57
Query: 177 ARD-----VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTT------ 225
+ VF D + ++ K + ++ +F N ++S +
Sbjct: 58 SSKLAHLLVFPRFGHPDKFLFNTLL----KCSKPEDSIRIFANYASKSSLLYLNERTFVF 113
Query: 226 -------------MVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARR 272
+ G G +K LY+ S+ G T ++ Y K G++ AR+
Sbjct: 114 VLGACARSASSSALRVGRIVHGMVKKLGFLYE--SELIGTT---LLHFYAKNGDLRYARK 168
Query: 273 LFDGIPVPQDASTWAAMLACYAQ-----NGYAKEGIEMFKEVR--QAKIKITEVAMVGAI 325
+FD +P + + TW AM+ Y N A++ + +F+ + ++ T+ MV +
Sbjct: 169 VFDEMP-ERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVL 227
Query: 326 SACAQLRDIRMSNALTDHIEE--GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRD 383
SA +Q + + + + +IE+ + + + AL++M+SKCG ++ A+ F M+ ++
Sbjct: 228 SAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKN 287
Query: 384 MYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQ 443
++T+++M T A +G+ + +L RM + G+KPN++TF +L+A GLVEEG F+
Sbjct: 288 VFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFK 347
Query: 444 IMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNV 503
M F + P+ EHY CIVDLLG+AG+++ AY I DA SL AC ++G
Sbjct: 348 SMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGET 407
Query: 504 ELGETAARHLLEIDPED---SGT----YVLLANMYASQDKWVGAEVVKKLMSKKGIKKPS 556
+GE + LLEI+ ED SG+ YV L+N+ A + KWV E ++K M ++ IK
Sbjct: 408 VMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRP 467
Query: 557 GYSWI 561
GYS++
Sbjct: 468 GYSFV 472
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 18/240 (7%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRH----CISTYARMH- 115
+L+F ++ ++ YA K+FD MP + W ++I + SH+ H + + R
Sbjct: 153 LLHFYAKNGDLRYARKVFDEMPE-RTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSC 211
Query: 116 -QSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGG--NKIVQTALLGMYAKSG 172
SGV P+ T VL+A + + G VHG + + GF + + TAL+ MY+K G
Sbjct: 212 CGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCG 271
Query: 173 CVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVA 228
C+ +A VF+ M ++V WT+M G A E L + M E N T+T++++
Sbjct: 272 CLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLS 331
Query: 229 GYASCGDMKAAKELYDVMSDKDGVTWV-----AMIAGYGKLGNVTEARRLFDGIPVPQDA 283
Y G ++ EL+ M + GVT V ++ GK G + EA + +P+ DA
Sbjct: 332 AYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDA 391
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 185/319 (57%), Gaps = 7/319 (2%)
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
DG ++ Y + + +AR++FD IP P D W ++ Y + G EG+E+FKE+
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQP-DVVKWDVLMNGYVRCGLGSEGLEVFKEM 209
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEG-CCDRTLIVSNALINMHSKCGN 368
I+ E ++ A++ACAQ+ + + + +++ + + V AL++M++KCG
Sbjct: 210 LVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGC 269
Query: 369 IDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKE-GLKPNQVTFIGVLN 427
I+ A F + R++++++A+I +A +G ++ A R+ +E G+KP+ V +GVL
Sbjct: 270 IETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLA 329
Query: 428 ACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADA 487
AC+ G +EEG + M + I P EHY+CIVDL+ RAG+L+ A LI++ A
Sbjct: 330 ACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLA 389
Query: 488 TTWGSLLAACRVHGNVELGETAARHLLEIDP----EDSGTYVLLANMYASQDKWVGAEVV 543
+ WG+LL CR H NVELGE A ++LL+++ E+ V L+N+Y S + A V
Sbjct: 390 SVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKV 449
Query: 544 KKLMSKKGIKKPSGYSWIQ 562
+ ++ ++GI+K G+S ++
Sbjct: 450 RGMIEQRGIRKTPGWSLLE 468
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 211/484 (43%), Gaps = 79/484 (16%)
Query: 54 LSPLLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTY-- 111
+S LL L+ + + YA +FD++ P++F++ ++IR + R+ H Y
Sbjct: 46 ISKLLTAFLHLPNLNKHFHYASSIFDSI-EIPNSFVYDTMIR--ICSRSSQPHLGLRYFL 102
Query: 112 --ARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSG-FGGNKIVQTALLGMY 168
+ + + PS TF ++ AC + GKQ+H +V++G F + VQT +L +Y
Sbjct: 103 LMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIY 162
Query: 169 AKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWT 224
+ + DAR VFD + DVV W ++ GY + + E +F M E + F+ T
Sbjct: 163 VEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVT 222
Query: 225 TMVAGYASCGDMKAAKELYDVMSDK-----DGVTWVAMIAGYGKLGNVTEARRLFDGIPV 279
T + A G + K +++ + K D A++ Y K G + A +F+ +
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-T 281
Query: 280 PQDASTWAAMLACYAQNGYAKEGIEMFKEV-RQAKIKITEVAMVGAISACAQLRDIRMSN 338
++ +WAA++ YA GYAK+ + R+ IK V ++G ++ACA
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAH-------- 333
Query: 339 ALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHG 398
+EEG RT+ L NM ++ G YS ++ G
Sbjct: 334 --GGFLEEG---RTM-----LENMEARYGITP------------KHEHYSCIVDLMCRAG 371
Query: 399 KSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEP--LPE 456
+ DA+DL +MP +KP + +LN C + VE G Q + D+E + E
Sbjct: 372 RLDDALDLIEKMP---MKPLASVWGALLNGCRTHKNVELGELAVQ---NLLDLEKGNVEE 425
Query: 457 HYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVE---LGETAARHL 513
A +V QL Y ++ N A +V G +E + +T L
Sbjct: 426 EEAALV-------QLSNIYFSVQRNP------------EAFKVRGMIEQRGIRKTPGWSL 466
Query: 514 LEID 517
LE+D
Sbjct: 467 LEVD 470
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 220/480 (45%), Gaps = 42/480 (8%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A ++FD + N P W ++R +L + + +M + V P T SSV+ AC
Sbjct: 216 ARRVFDEIVN-PSDVSWNVIVRRYLEM-GFNDEAVVMFFKMLELNVRPLNHTVSSVMLAC 273
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWT 193
R A+ GK +H V+ + +V T++ MY K + AR VFD +D+ +WT
Sbjct: 274 SRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWT 333
Query: 194 AMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK---- 249
+ + GYA + EAR LFD M ERN +W M+ GY + A + +M +
Sbjct: 334 SAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
Query: 250 DGVT--WV---------------------------------AMIAGYGKLGNVTEARRLF 274
D VT W+ A++ YGK G + A F
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 275 DGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDI 334
+ +D +W A+L A+ G +++ + F E Q + K ++ + ++ CA + +
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFF-EGMQVEAKPSKYTLATLLAGCANIPAL 512
Query: 335 RMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAF 394
+ A+ + +++ A+++M+SKC D A F RD+ ++++I
Sbjct: 513 NLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGC 572
Query: 395 AEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPL 454
+G+S++ +LF + EG+KP+ VTF+G+L AC G VE G ++F M+ + I P
Sbjct: 573 CRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQ 632
Query: 455 PEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLL 514
EHY C+++L + G L + + + AC+ + +LG AA+ L+
Sbjct: 633 VEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 232/532 (43%), Gaps = 87/532 (16%)
Query: 54 LSPLLLRVLNFSSEKSNIC----YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCIS 109
L P+ L LN + E C A +LF+ MP D W ++I A +
Sbjct: 93 LPPIFL--LNRAIEAYGKCGCVDDARELFEEMPE-RDGGSWNAVITA-CAQNGVSDEVFR 148
Query: 110 TYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYA 169
+ RM++ GV + +F+ VL +CG + + +Q+H +V+ G+ GN ++T+++ +Y
Sbjct: 149 MFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYG 208
Query: 170 KSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERN---------- 219
K + DAR VFD + + V+W ++ Y ++ EA +F M E N
Sbjct: 209 KCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSS 268
Query: 220 -----------------------------SFTWTTMVAGYASCGDMKAAKELYDVMSDKD 250
+ T++ Y C +++A+ ++D KD
Sbjct: 269 VMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKD 328
Query: 251 GVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVR 310
+W + ++GY G EAR LFD +P ++ +W AML Y E ++ +R
Sbjct: 329 LKSWTSAMSGYAMSGLTREARELFDLMP-ERNIVSWNAMLGGYVHAHEWDEALDFLTLMR 387
Query: 311 QAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNID 370
Q I V +V ++ C+ + D++M I D +IV+NAL++M+ KCG +
Sbjct: 388 QEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQ 447
Query: 371 LAWREFSTM-RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNAC 429
A F M RD +++A++T A G+S+ A+ F M E KP++ T +L C
Sbjct: 448 SANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGC 506
Query: 430 SS-----------SGLVEEGCRFFQIMTGV----------FD--IEPLPEHYACIVDLL- 465
++ L+ +G + ++ G FD IE E A DL+
Sbjct: 507 ANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE--AATRDLIL 564
Query: 466 -----------GRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELG 506
GR+ ++ + L++ D T+ +L AC G+VELG
Sbjct: 565 WNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELG 616
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 183/425 (43%), Gaps = 47/425 (11%)
Query: 122 SGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVF 181
S + + + +C +V+ ++V LV + + Y K GCV DAR++F
Sbjct: 60 SYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELF 119
Query: 182 DGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAG-YASCG---DMK 237
+ M +RD +W A+I A+ + E +F M T AG SCG D++
Sbjct: 120 EEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLR 179
Query: 238 AAKEL------YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLA 291
++L Y + D T +++ YGK +++ARR+FD I P D S W ++
Sbjct: 180 LLRQLHCAVVKYGYSGNVDLET--SIVDVYGKCRVMSDARRVFDEIVNPSDVS-WNVIVR 236
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDR 351
Y + G+ E + MF ++ + ++ + + AC++ + + + +
Sbjct: 237 RYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVA 296
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
+VS ++ +M+ KC ++ A R F R +D+ ++++ ++ +A G +++A +LF MP
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 412 KEGL-------------------------------KPNQVTFIGVLNACSSSGLVEEGCR 440
+ + + VT + +LN CS V+ G +
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 441 FFQ-IMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRV 499
I +D + + ++D+ G+ G L+ A ++ + D +W +LL
Sbjct: 417 AHGFIYRHGYDTNVIVAN--ALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVAR 474
Query: 500 HGNVE 504
G E
Sbjct: 475 VGRSE 479
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 242/507 (47%), Gaps = 29/507 (5%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A KLFD M + + + L+R F + Y RM GV +G T+ ++ C
Sbjct: 166 ALKLFDEMLD-RNLAVCNLLLRCF-CQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGC 223
Query: 134 GRVPAMVEGKQVHGRLVQSGFG-GNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
+ EGKQ+H +V+SG+ N V L+ Y+ G + + F+ + ++DV++W
Sbjct: 224 SHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISW 283
Query: 193 TAMICGYAKVAMMVEARWLFDNM---GERNSFTWTTMVAGYAS-CGDMKAAKEL------ 242
+++ A ++++ LF M G+R S + S D+++ K++
Sbjct: 284 NSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLK 343
Query: 243 --YDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAK 300
+DV S A+I YGK + + L+ +P + +++ G K
Sbjct: 344 MGFDVSSLH---VQSALIDMYGKCNGIENSALLYQSLPC-LNLECCNSLMTSLMHCGITK 399
Query: 301 EGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD------RTLI 354
+ IEMF + I EV + + A + + + +L CC +
Sbjct: 400 DIIEMFGLMIDEGTGIDEVTLSTVLKALS----LSLPESLHSCTLVHCCAIKSGYAADVA 455
Query: 355 VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG 414
VS +LI+ ++K G +++ + F + +++ +++I +A +G D + + M +
Sbjct: 456 VSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMN 515
Query: 415 LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERA 474
L P++VT + VL+ CS SGLVEEG F + + I P + YAC+VDLLGRAG +E+A
Sbjct: 516 LIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKA 575
Query: 475 YSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQ 534
L+ + AD W SLL +CR+H N +G AA L+ ++PE+ Y+ ++ Y
Sbjct: 576 ERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEI 635
Query: 535 DKWVGAEVVKKLMSKKGIKKPSGYSWI 561
+ + ++++ + + + + GYS +
Sbjct: 636 GDFEISRQIREIAASRELMREIGYSSV 662
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 184/375 (49%), Gaps = 17/375 (4%)
Query: 70 NICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSV 129
N+ AH+ FD M + D + LI + R I YA M G+ S TF SV
Sbjct: 61 NLLSAHEAFDEM-SVRDVVTYNLLISGNSRYGCSLRA-IELYAEMVSCGLRESASTFPSV 118
Query: 130 LNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDV 189
L+ C EG QVH R++ GFG N V++AL+G+YA V A +FD M DR++
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 190 VAWTAMI-----CGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYD 244
++ G +K V R + + +N T+ M+ G + + K+L+
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVA-KNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 245 VMSDKDG----VTWVA--MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGY 298
++ K G +VA ++ Y G+++ + R F+ +P +D +W ++++ A G
Sbjct: 238 LVV-KSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVCADYGS 295
Query: 299 AKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD-RTLIVSN 357
+ +++F +++ + + + ++ C++ DI+ + ++ + D +L V +
Sbjct: 296 VLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQS 355
Query: 358 ALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKP 417
ALI+M+ KC I+ + + ++ C ++ ++++T+ G ++D I++F M EG
Sbjct: 356 ALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI 415
Query: 418 NQVTFIGVLNACSSS 432
++VT VL A S S
Sbjct: 416 DEVTLSTVLKALSLS 430
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 127/280 (45%), Gaps = 53/280 (18%)
Query: 234 GDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAML 290
G++ +A E +D MS +D VT+ +I+G + G A L+ + + + AST+ ++L
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
+ + + +EGI Q ++ + GC
Sbjct: 120 SVCSDELFCREGI-------QVHCRVISLGF-------------------------GC-- 145
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
+ V +AL+ +++ +D+A + F M R++ + ++ F + G+S+ +++ RM
Sbjct: 146 -NMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRM 204
Query: 411 PKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQI-------MTGVFDIEPLPEHYACIVD 463
EG+ N +T+ ++ CS LV EG + + ++ +F L ++Y+ D
Sbjct: 205 ELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGD 264
Query: 464 LLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNV 503
L G R+++ + E D +W S+++ C +G+V
Sbjct: 265 LSGSM----RSFNAVPEK----DVISWNSIVSVCADYGSV 296
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
N I+ K GN+ A F M RD+ TY+ +I+ + +G S AI+L+ M GL+
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 417 PNQVTFIGVLNACSSSGLVEEG----CRFFQIMTG--VFDIEPLPEHYACI 461
+ TF VL+ CS EG CR + G +F L YAC+
Sbjct: 110 ESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACL 160
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 237/491 (48%), Gaps = 107/491 (21%)
Query: 73 YAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNA 132
Y +FD++ P+ F+ S+ + F S + Y + + G++P F+F V+ +
Sbjct: 58 YTRLIFDSV-TFPNVFVVNSMFKYF-SKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS 115
Query: 133 CGRV----PAMVE--------------------------GKQVHGRLVQ----------S 152
GR A+VE ++V ++ Q S
Sbjct: 116 AGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 153 GFG--GNK---------------IVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAM 195
G+ GNK + T ++ +AK + +AR FD M ++ VV+W AM
Sbjct: 176 GYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAM 235
Query: 196 ICGYAKVAMMVEARWLFDNM---GER-NSFTWTTMVAG---------------------- 229
+ GYA+ +A LF++M G R N TW +++
Sbjct: 236 LSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRV 295
Query: 230 -------------YASCGDMKAAKELYDVM-SDKDGVTWVAMIAGYGKLGNVTEARRLFD 275
+A C D+++A+ +++ + + ++ VTW AMI+GY ++G+++ AR+LFD
Sbjct: 296 RLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFD 355
Query: 276 GIPVPQDASTWAAMLACYAQNGYAKEGIEMFKE-VRQAKIKITEVAMVGAISACAQLRDI 334
+P ++ +W +++A YA NG A IE F++ + K EV M+ +SAC + D+
Sbjct: 356 TMP-KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 335 RMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAF 394
+ + + D+I + +LI M+++ GN+ A R F M+ RD+ +Y+ + TAF
Sbjct: 415 ELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAF 474
Query: 395 AEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPL 454
A +G + ++L +M EG++P++VT+ VL AC+ +GL++EG R F+ + PL
Sbjct: 475 AANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PL 529
Query: 455 PEHYACIVDLL 465
+HYAC+ DLL
Sbjct: 530 ADHYACM-DLL 539
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 182/331 (54%), Gaps = 4/331 (1%)
Query: 230 YASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
Y CG + AK+L+ + +D V+W ++IAG + G+V A +LFD +P ++ +W M
Sbjct: 163 YTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMP-DKNIISWNIM 221
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
++ Y I +F+E+ +A + E +V ++AC + ++ ++ +
Sbjct: 222 ISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFL 281
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFR 409
+ ++++ ALI+M+ KC + LA R F ++ R+ T++ MI A HG+ + ++LF
Sbjct: 282 NSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEA 341
Query: 410 MPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAG 469
M L+P++VTF+GVL C+ +GLV +G ++ +M F I+P H C+ +L AG
Sbjct: 342 MINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAG 401
Query: 470 ---QLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVL 526
+ E A + + + ++T W +LL++ R GN LGE+ A+ L+E DP + Y L
Sbjct: 402 FPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHL 461
Query: 527 LANMYASQDKWVGAEVVKKLMSKKGIKKPSG 557
L N+Y+ +W V++++ ++ I + G
Sbjct: 462 LMNIYSVTGRWEDVNRVREMVKERKIGRIPG 492
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 183/465 (39%), Gaps = 81/465 (17%)
Query: 59 LRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSG 118
+R+L SS + Y ++ ++ + + +A+L + + + Y + + G
Sbjct: 58 IRLLKSSSRFGDSSYTVSIYRSIGK---LYCANPVFKAYLVSSSP-KQALGFYFDILRFG 113
Query: 119 VLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDAR 178
+P +TF S+++ + + GK HG+ ++ G VQ +L+ MY G + A+
Sbjct: 114 FVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAK 173
Query: 179 DVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYA------- 231
+F + RD+V+W ++I G + ++ A LFD M ++N +W M++ Y
Sbjct: 174 KLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGV 233
Query: 232 -------------------------SCGDMKAAKE-------LYDVMSDKDGVTWVAMIA 259
+CG KE L + V A+I
Sbjct: 234 SISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALID 293
Query: 260 GYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEV 319
YGK V ARR+FD + + ++ TW M+ + +G + G+E+F+ + ++ EV
Sbjct: 294 MYGKCKEVGLARRIFDSLSI-RNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEV 352
Query: 320 AMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM 379
VG + CA+ + +G +L+V I N W
Sbjct: 353 TFVGVLCGCAR----------AGLVSQGQSYYSLMVDEFQIK-----PNFGHQW------ 391
Query: 380 RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGC 439
M ++ G ++A + +P E + P + +L++ +G G
Sbjct: 392 ---------CMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLG- 441
Query: 440 RFFQIMTGVFDIEPLPEHY----ACIVDLLGRAGQLERAYSLIKE 480
I + + +PL Y I + GR + R ++KE
Sbjct: 442 --ESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKE 484
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 212/425 (49%), Gaps = 13/425 (3%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARM-HQSGVLPSGFTFSSVLNA 132
A ++FD + D +W ++I A L+H + + M + + P+ +++L
Sbjct: 268 ARRVFDEIVE-RDIVVWGAMI-AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPV 325
Query: 133 CGRVPAMVEGKQVHGRLVQS-GFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVA 191
G V A+ GK+VH +++S + V + L+ +Y K G + R VF G R+ ++
Sbjct: 326 LGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAIS 385
Query: 192 WTAMICGYAKVAMMVEAR----WLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS 247
WTA++ GYA +A W+ + T T++ A +K KE++
Sbjct: 386 WTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYAL 445
Query: 248 DKDGVTWVAMIAG----YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGI 303
+ V+++ Y K G RLFD + ++ W AM+ CY +N + GI
Sbjct: 446 KNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-QRNVKAWTAMIDCYVENCDLRAGI 504
Query: 304 EMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMH 363
E+F+ + +K + V M ++ C+ L+ +++ L HI + + VS +I M+
Sbjct: 505 EVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMY 564
Query: 364 SKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFI 423
KCG++ A F + + T++A+I A+ + +DAI+ F +M G PN TF
Sbjct: 565 GKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFT 624
Query: 424 GVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT 483
VL+ CS +G V+E RFF +M +++++P EHY+ +++LL R G++E A L +++
Sbjct: 625 AVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAVMSSS 684
Query: 484 SADAT 488
S+ T
Sbjct: 685 SSLQT 689
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 207/435 (47%), Gaps = 17/435 (3%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRA-FLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNA 132
A K+FD + + W +L+R +S + ++ +ST+ M + GV + ++ S+V +
Sbjct: 165 AQKVFDE-STSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKS 223
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
A+ +G + H +++G + ++T+L+ MY K G V AR VFD + +RD+V W
Sbjct: 224 FAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVW 283
Query: 193 TAMICGYAKVAMMVEARWLFDNMGER-----NSFTWTTMVAGYASCGDMKAAKELY-DVM 246
AMI G A EA LF M NS TT++ +K KE++ V+
Sbjct: 284 GAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVL 343
Query: 247 SDKDGVTWVAMIAG----YGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEG 302
K+ V + +G Y K G++ RR+F G ++A +W A+++ YA NG +
Sbjct: 344 KSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG-SKQRNAISWTALMSGYAANGRFDQA 402
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+ ++Q + V + + CA+LR I+ + + + + + +L+ M
Sbjct: 403 LRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVM 462
Query: 363 HSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+SKCG + R F + R++ ++AMI + E+ + I++F M +P+ VT
Sbjct: 463 YSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTM 522
Query: 423 IGVLNACSSSGLVEEGCRFF-QIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKEN 481
VL CS ++ G I+ F E +P A I+ + G+ G L R+ + +
Sbjct: 523 GRVLTVCSDLKALKLGKELHGHILKKEF--ESIPFVSARIIKMYGKCGDL-RSANFSFDA 579
Query: 482 ATSADATTWGSLLAA 496
+ TW +++ A
Sbjct: 580 VAVKGSLTWTAIIEA 594
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 168/341 (49%), Gaps = 21/341 (6%)
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
+ Q G+ + TFS++L AC R +++ GKQVH + +G N+ ++T L+ MY G
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS 161
Query: 174 VCDARDVFDGMDDRDVVAWTAMICG--------YAKV-AMMVEARWLFDNMGERNSFTWT 224
V DA+ VFD +V +W A++ G Y V + E R L ++ N ++ +
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDL---NVYSLS 218
Query: 225 TMVAGYASCGDMKAAKELYDVMSDKDGV-----TWVAMIAGYGKLGNVTEARRLFDGIPV 279
+ +A ++ + + ++ K+G+ +++ Y K G V ARR+FD I V
Sbjct: 219 NVFKSFAGASALRQGLKTH-ALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI-V 276
Query: 280 PQDASTWAAMLACYAQNGYAKEGIEMFKE-VRQAKIKITEVAMVGAISACAQLRDIRMSN 338
+D W AM+A A N E + +F+ + + KI V + + ++ +++
Sbjct: 277 ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK 336
Query: 339 ALTDHI-EEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEH 397
+ H+ + V + LI+++ KCG++ R F + R+ +++A+++ +A +
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAAN 396
Query: 398 GKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
G+ A+ M +EG +P+ VT VL C+ +++G
Sbjct: 397 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/210 (18%), Positives = 85/210 (40%), Gaps = 8/210 (3%)
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
+ +A+ + + + + Q I + + AC + + + + HI
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKS--QDAIDLF 407
+ + L++M++ CG++ A + F ++Y+++A++ GK QD + F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 408 FRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRF--FQIMTGVFDIEPLPEHYACIVDLL 465
M + G+ N + V + + + + +G + I G+F+ L +
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 466 GRAGQLERAYSLIKENATSADATTWGSLLA 495
G+ G R + I E D WG+++A
Sbjct: 263 GKVGLARRVFDEIVER----DIVVWGAMIA 288
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 184/346 (53%), Gaps = 6/346 (1%)
Query: 219 NSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIP 278
+ F T+ V Y GD++++++++D + + V +++ G+ G + A F +P
Sbjct: 120 DPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMP 179
Query: 279 VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQ---AKIKITEVAMVGAISACAQLRD-- 333
V D +W ++ +++ G + + +F E+ Q A I E V +S+CA
Sbjct: 180 V-TDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGG 238
Query: 334 IRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITA 393
IR+ + ++ T + AL++M+ K G++++A F +R + + ++A+I+A
Sbjct: 239 IRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISA 298
Query: 394 FAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEP 453
A +G+ + A+++F M + PN +T + +L AC+ S LV+ G + F + + I P
Sbjct: 299 LASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIP 358
Query: 454 LPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHL 513
EHY C+VDL+GRAG L A + I+ DA+ G+LL AC++H N ELG T + L
Sbjct: 359 TSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQL 418
Query: 514 LEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYS 559
+ + P+ G YV L+ A W AE ++K M + GI+K YS
Sbjct: 419 IGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 131/300 (43%), Gaps = 46/300 (15%)
Query: 89 IWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGR 148
++ +LIR++L+ ++ ++ + M S V P+ TF S++ A ++ G +HG+
Sbjct: 53 VYNTLIRSYLT-TGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQ 111
Query: 149 LVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEA 208
++ GF + VQT+ + Y + G + +R +FD + + VVA +++ + M A
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 209 RWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMS--------------------- 247
F M + +WTT++ G++ G A ++ M
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 248 ---DKDGVTWVAMIAG--------------------YGKLGNVTEARRLFDGIPVPQDAS 284
D+ G+ I G YGK G++ A +FD I +
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR-DKKVC 290
Query: 285 TWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHI 344
W A+++ A NG K+ +EMF+ ++ + + + ++ ++ACA+ + + + L I
Sbjct: 291 AWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 244/516 (47%), Gaps = 43/516 (8%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSV--LN 131
A LFD MP D W ++I +S H + I + M + + P+ FTFS + L
Sbjct: 89 ALDLFDEMPE-RDVVSWNTMISGLVSCGFH-EYGIRVFFDMQRWEIRPTEFTFSILASLV 146
Query: 132 ACGRVPAMVEGKQVHGRLVQSGFGG-NKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
C R G+Q+HG + SG N +V +++ MY + G A VF M+DRDVV
Sbjct: 147 TCVR-----HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVV 201
Query: 191 AWTAMIC-----GYAKVAMMVEARWLFDNMG-ERNSFTWTTMVAGYASCGDMKAAKELYD 244
+W +I G +VA+ + WL M + + +T + +V+ + ++ K+
Sbjct: 202 SWNCLILSCSDSGNKEVAL--DQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL- 258
Query: 245 VMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTW-----AAMLACYAQNGYA 299
+ K G +++ G G + ++ RL D + + ++ W +M+ Y+ +
Sbjct: 259 ALCIKMGFLSNSIVLGAG-IDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCG 317
Query: 300 KEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH--------IEEGCCDR 351
++ + +F ++ + +S+ M+ + DH I+ G D
Sbjct: 318 EDALRLFILAMTQSVRPDKFTFSSVLSS--------MNAVMLDHGADVHSLVIKLGF-DL 368
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
V+ +L+ M+ K G++DLA F+ +D+ ++ +I A + ++ +++ +F ++
Sbjct: 369 DTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLL 428
Query: 412 -KEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQ 470
+ LKP++VT +G+L AC +G V EG + F M + P EHYACI++LL R G
Sbjct: 429 MNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGM 488
Query: 471 LERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTYVLLANM 530
+ A + + + W +L A G+ L ET A+ +LE +P+ S Y++L +
Sbjct: 489 INEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKI 548
Query: 531 YASQDKWVGAEVVKKLMSKKGIKKPSGYSWIQREIS 566
Y +W + ++ M++ +K G S I E S
Sbjct: 549 YEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESS 584
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 159/347 (45%), Gaps = 40/347 (11%)
Query: 120 LPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARD 179
+PS FS ++N + K VH +L+++GF L +Y KSG V +A
Sbjct: 1 MPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQ 60
Query: 180 VFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCG----- 234
+FD + D++ + W + G K + A LFD M ER+ +W TM++G SCG
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYG 120
Query: 235 ----------DMKAAKELYDVM----------------------SDKDGVTWVAMIAGYG 262
+++ + + ++ S + V W +++ Y
Sbjct: 121 IRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYR 180
Query: 263 KLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMV 322
+LG A +F + +D +W ++ + +G + ++ F +R+ +I+ E +
Sbjct: 181 RLGVFDYALSVFLTME-DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVS 239
Query: 323 GAISACAQLRDI-RMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRC 381
+S C+ LR++ + AL I+ G + IV A I+M SKC +D + + F +
Sbjct: 240 MVVSICSDLRELSKGKQALALCIKMGFLSNS-IVLGAGIDMFSKCNRLDDSVKLFRELEK 298
Query: 382 RDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNA 428
D ++MI +++ H +DA+ LF + ++P++ TF VL++
Sbjct: 299 WDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 11/381 (2%)
Query: 64 FSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSG 123
F ++ + A + FD M D WT++I A S + H I + M LP+
Sbjct: 227 FYAQCGELTSALRAFDMMEE-KDVISWTAVISA-CSRKGHGIKAIGMFIGMLNHWFLPNE 284
Query: 124 FTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDG 183
FT S+L AC A+ G+QVH +V+ + V T+L+ MYAK G + D R VFDG
Sbjct: 285 FTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDG 344
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAA 239
M +R+ V WT++I +A+ EA LF M R N+ T +++ S G +
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 240 KELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQ 295
KEL+ + +K+ ++ Y K G +A + +P +D +W AM++ +
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSS 463
Query: 296 NGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIV 355
G+ E ++ KE+ Q ++ A+ ACA + + ++ ++ + V
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFV 523
Query: 356 SNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
+ALI+M++KCG + A+R F +M +++ ++ AMI +A +G ++A+ L +RM EG
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583
Query: 416 KPNQVTFIGVLNACSSSGLVE 436
+ + F +L+ C L E
Sbjct: 584 EVDDYIFATILSTCGDIELDE 604
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 194/372 (52%), Gaps = 13/372 (3%)
Query: 70 NICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGV-LPSGFTFSS 128
++ YA K+FD+MP + WT++I +L + + + + G+ + F
Sbjct: 132 DLVYARKVFDSMPE-KNTVTWTAMIDGYLKYGLE-DEAFALFEDYVKHGIRFTNERMFVC 189
Query: 129 VLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD 188
+LN C R G+QVHG +V+ G G N IV+++L+ YA+ G + A FD M+++D
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 189 VVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYD 244
V++WTA+I ++ ++A +F M N FT +++ + ++ ++++
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 245 V----MSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAK 300
+ M D +++ Y K G +++ R++FDG+ ++ TW +++A +A+ G+ +
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWTSIIAAHAREGFGE 367
Query: 301 EGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALI 360
E I +F+ +++ + + +V + AC + + + L I + ++ + + + L+
Sbjct: 368 EAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLV 427
Query: 361 NMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQV 420
++ KCG A+ + RD+ +++AMI+ + G +A+D M +EG++PN
Sbjct: 428 WLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPF 487
Query: 421 TFIGVLNACSSS 432
T+ L AC++S
Sbjct: 488 TYSSALKACANS 499
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 162/389 (41%), Gaps = 81/389 (20%)
Query: 154 FGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFD 213
FG N I LG AR VFD M +++ V WTAMI GY K + EA LF+
Sbjct: 119 FGNNLISSCVRLGDLVY------ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFE 172
Query: 214 N---------------------------------------MGERNSFTWTTMVAGYASCG 234
+ +G N +++V YA CG
Sbjct: 173 DYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCG 232
Query: 235 DMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYA 294
++ +A +D+M +KD ++W A+I+ AC +
Sbjct: 233 ELTSALRAFDMMEEKDVISWTAVIS-------------------------------AC-S 260
Query: 295 QNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLI 354
+ G+ + I MF + E + + AC++ + +R + + + +
Sbjct: 261 RKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF 320
Query: 355 VSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEG 414
V +L++M++KCG I + F M R+ T++++I A A G ++AI LF M +
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH 380
Query: 415 LKPNQVTFIGVLNACSSSGLVEEGCRFF-QIMTGVFDIEPLPEHYACIVDLLGRAGQLER 473
L N +T + +L AC S G + G QI+ IE + +V L + G+
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKN--SIEKNVYIGSTLVWLYCKCGESRD 438
Query: 474 AYSLIKENATSADATTWGSLLAACRVHGN 502
A++++++ S D +W ++++ C G+
Sbjct: 439 AFNVLQQ-LPSRDVVSWTAMISGCSSLGH 466
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 30/265 (11%)
Query: 257 MIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKI 316
+I+ +LG++ AR++FD +P ++ TW AM+ Y + G E +F++ + I+
Sbjct: 123 LISSCVRLGDLVYARKVFDSMP-EKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRF 181
Query: 317 T-EVAMVGAISACAQLRDIRMSNAL-TDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWR 374
T E V ++ C++ + + + + ++ G + LIV ++L+ +++CG + A R
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN--LIVESSLVYFYAQCGELTSALR 239
Query: 375 EFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGL 434
F M +D+ +++A+I+A + G AI +F M PN+ T +L ACS
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE--- 296
Query: 435 VEEGCRFFQ----------IMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATS 484
E+ RF + I T VF L + YA + G++ + + ++
Sbjct: 297 -EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYA-------KCGEISDCRKVF-DGMSN 347
Query: 485 ADATTWGSLLAACRVHGNVELGETA 509
+ TW S++AA H GE A
Sbjct: 348 RNTVTWTSIIAA---HAREGFGEEA 369
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFR 409
D+ + N LI+ + G++ A + F +M ++ T++AMI + ++G +A LF
Sbjct: 114 DQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFED 173
Query: 410 MPKEGLK-PNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRA 468
K G++ N+ F+ +LN CS E G + M V + E + +V +
Sbjct: 174 YVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE--SSLVYFYAQC 231
Query: 469 GQLE---RAYSLIKENATSADATTWGSLLAACRVHGN 502
G+L RA+ +++E D +W ++++AC G+
Sbjct: 232 GELTSALRAFDMMEEK----DVISWTAVISACSRKGH 264
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 203/423 (47%), Gaps = 45/423 (10%)
Query: 143 KQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAK- 201
KQ+H ++++ ++++ L+ + + G A VF+ + W MI +
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 202 ----------VAMMVEARWLFDN-----------------MGER------------NSFT 222
+ MM+ + FD +G + + F
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 223 WTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQD 282
T++ Y CG + ++++D M + V+W M+ G + A +F+ +P+ ++
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPM-RN 215
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
+W AM+ Y +N E ++F+ ++ +K E +V + A QL + M + D
Sbjct: 216 VVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHD 275
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQD 402
+ + + ALI+M+SKCG++ A + F M+ + + T+++MIT+ HG ++
Sbjct: 276 YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE 335
Query: 403 AIDLFFRMPKEG-LKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI 461
A+ LF M +E ++P+ +TF+GVL+AC+++G V++G R+F M V+ I P+ EH AC+
Sbjct: 336 ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACM 395
Query: 462 VDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDS 521
+ LL +A ++E+A +L++ + D + S G E ET ++H + D+
Sbjct: 396 IQLLEQALEVEKASNLVESMDSDPD---FNSSFGNEYTDGMNETNETPSQHQIMFTKWDT 452
Query: 522 GTY 524
G +
Sbjct: 453 GRF 455
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 145/323 (44%), Gaps = 50/323 (15%)
Query: 57 LLLRVLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAF-LSHRAHFRHCISTYARM- 114
L+ ++++ SS YA +F+ + P F W +IR+ ++H+ R + + M
Sbjct: 54 LVRQLISVSSSFGETQYASLVFNQL-QSPSTFTWNLMIRSLSVNHKP--REALLLFILMM 110
Query: 115 --HQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
HQS FTF V+ AC ++ G QVHG +++GF + Q L+ +Y K G
Sbjct: 111 ISHQSQF--DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCG 168
Query: 173 CVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYAS 232
R VFD M R +V+WT M+ G + + A +F+ M RN +WT M+ Y
Sbjct: 169 KPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVK 228
Query: 233 CGDMKAAKELY------DVMSDKDGVT----------------WV--------------- 255
A +L+ DV ++ + WV
Sbjct: 229 NRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFL 288
Query: 256 --AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMF-KEVRQA 312
A+I Y K G++ +AR++FD + + +TW +M+ +G +E + +F + +A
Sbjct: 289 GTALIDMYSKCGSLQDARKVFD-VMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEA 347
Query: 313 KIKITEVAMVGAISACAQLRDIR 335
++ + VG +SACA +++
Sbjct: 348 SVEPDAITFVGVLSACANTGNVK 370
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 220/502 (43%), Gaps = 79/502 (15%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P + ++ F + S +M G+ P +T+++++ C R E Q
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD----DRDVVAWTAMICGYA 200
V + +GF +K+ ALL +Y KS +A V + M +V + ++I YA
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 201 KVAMMVEARWLFDNMGERNS----FTWTTMVAGYASCGDMKAAKELYDVMSD---KDGV- 252
+ M+ EA L + M E+ + FT+TT+++G+ G +++A +++ M + K +
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIPV---PQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
T+ A I YG G TE ++FD I V D TW +LA + QNG E +FKE+
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
++A +R N LI+ +S+CG+
Sbjct: 481 KRAGF---------------------------------VPERETF--NTLISAYSRCGSF 505
Query: 370 DLAWREFSTMR----CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
+ A + M D+ TY+ ++ A A G + + + M KPN++T+ +
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 426 LNACSSS---GLVEEGCRFFQIMTGVFDIEPLPEHYACIV------DLLGRAGQLERAYS 476
L+A ++ GL+ ++ +GV IEP +V DLL A ERA+S
Sbjct: 566 LHAYANGKEIGLMHSLAE--EVYSGV--IEPRAVLLKTLVLVCSKCDLLPEA---ERAFS 618
Query: 477 LIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDS-----GTYVLLANMY 531
+KE S D TT S+++ ++G ++ A +L+ E TY L M+
Sbjct: 619 ELKERGFSPDITTLNSMVS---IYGRRQM-VAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 532 ASQDKWVGAEVVKKLMSKKGIK 553
+ + +E + + + KGIK
Sbjct: 675 SRSADFGKSEEILREILAKGIK 696
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/438 (19%), Positives = 172/438 (39%), Gaps = 66/438 (15%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P + SLI A+ + + +M + G P FT++++L+ R +
Sbjct: 347 PSIVTYNSLISAY-ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD----DRDVVAWTAMICGYA 200
+ + +G N A + MY G + +FD ++ D+V W ++ +
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 201 KVAMMVEARWLFDNMGERNSF-----TWTTMVAGYASCGDMKAAKELYDVMSD----KDG 251
+ M E +F M +R F T+ T+++ Y+ CG + A +Y M D D
Sbjct: 466 QNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 252 VTWVAMIAGYGKLGNVTEARRLF----DGIPVPQDASTWAAMLACYAQNG---------- 297
T+ ++A + G ++ ++ DG P + T+ ++L YA NG
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL-TYCSLLHAYA-NGKEIGLMHSLA 582
Query: 298 --------------------------YAKEGIEMFKEVRQAKIKITEVAMVGAISACAQL 331
E F E+++ + +S +
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 642
Query: 332 RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKC---GNIDLAWREFSTMRCR-DMYTY 387
+ + +N + D+++E ++ N+L+ MHS+ G + RE + D+ +Y
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY 702
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEE--GCRFFQIM 445
+ +I A+ + + +DA +F M G+ P+ +T+ + + ++ + EE G + I
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 446 TGVFDIEPLPEHYACIVD 463
G P Y IVD
Sbjct: 763 HGC---RPNQNTYNSIVD 777
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 175/417 (41%), Gaps = 45/417 (10%)
Query: 160 VQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNM 215
V ++ M K G V A ++F+G+ + DV ++T++I +A EA +F M
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 216 GERNSFTWTTMVAGYASCGDMKAAKELYDVMSD---KDGVTWVAMIAGYGKLGNVTEARR 272
E C K Y+V+ + K G W K+ ++ E +
Sbjct: 235 EE-------------DGC---KPTLITYNVILNVFGKMGTPW-------NKITSLVEKMK 271
Query: 273 LFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
DGI DA T+ ++ C + +E ++F+E++ A +V + +
Sbjct: 272 -SDGI--APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYS 388
+ + + + + +++ N+LI+ +++ G +D A + M + D++TY+
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV 448
+++ F GK + A+ +F M G KPN TF + + G E + F + V
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN-V 447
Query: 449 FDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA---DATTWGSLLAACRVHGNVEL 505
+ P + ++ + G+ G + KE + + T+ +L++A G+ E
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 506 GETAARHLLE--IDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSW 560
T R +L+ + P D TY + A W +E V M + G KP+ ++
Sbjct: 508 AMTVYRRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTY 562
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 168/394 (42%), Gaps = 31/394 (7%)
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR 187
S+L GRV + + L + GF + T+L+ +A SG +A +VF M++
Sbjct: 181 SMLGKEGRVSS---AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 188 ---------DVV--AWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDM 236
+V+ + M + K+ +VE + D + +++T+ T++
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVE-KMKSDGIAP-DAYTYNTLITCCKRGSLH 295
Query: 237 KAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPV---PQDASTWAAM 289
+ A ++++ M D VT+ A++ YGK EA ++ + + + T+ ++
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
++ YA++G E +E+ ++ + K +S + + + ++ + + C
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRC----RDMYTYSAMITAFAEHGKSQDAID 405
+ NA I M+ G + F + D+ T++ ++ F ++G +
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLL 465
+F M + G P + TF +++A S G E+ ++ M + P Y ++ L
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAAL 534
Query: 466 GRAG---QLERAYSLIKENATSADATTWGSLLAA 496
R G Q E+ + +++ + T+ SLL A
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 111/284 (39%), Gaps = 24/284 (8%)
Query: 241 ELYDVMSDKDGVT---WVAMIAGYGKLGNVTEARRLFDGIPVPQD------ASTWAAMLA 291
EL++ DK T +A + G G A R FD +D S A +++
Sbjct: 122 ELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIIS 181
Query: 292 CYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDR 351
+ G MF +++ + + ISA A R + + +EE C
Sbjct: 182 MLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKP 241
Query: 352 TLIVSNALINMHSKCGNIDLAWREFSTMRCR--------DMYTYSAMITAFAEHGKSQDA 403
TLI N ++N+ K G W + +++ + D YTY+ +IT Q+A
Sbjct: 242 TLITYNVILNVFGKMGT---PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 404 IDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVD 463
+F M G ++VT+ +L+ S +E + M + P Y ++
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV-LNGFSPSIVTYNSLIS 357
Query: 464 LLGRAGQLERAYSL---IKENATSADATTWGSLLAACRVHGNVE 504
R G L+ A L + E T D T+ +LL+ G VE
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 201/483 (41%), Gaps = 47/483 (9%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD F + SLI LS S M ++G+ P+ FT+ + ++ +
Sbjct: 485 PDIFCYNSLIIG-LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
+ + G NK++ T L+ Y K G V +A + M D+ D +T ++ G
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 201 KVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGV 252
K + +A +F M + + F++ ++ G++ G+M+ A ++D M ++ + +
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIPVP---QDASTWAAMLACYAQNGYAKEGIEMFKEV 309
+ ++ G+ + G + +A+ L D + V +A T+ ++ Y ++G E +F E+
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
+ + + C +L D+ + + ++GC T NALIN K G
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF-NALINWVFKFGKT 782
Query: 370 DLAWR--------EFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVT 421
+L F + TY+ MI + G + A +LF +M L P +T
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFD------IEPLPEHYACIVDLLGRAGQLERAY 475
+ +LN G E M VFD IEP Y+ I++ + G +A
Sbjct: 843 YTSLLNGYDKMGRRAE-------MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895
Query: 476 SLIKE--------NATSADATTWGSLLAACRVHGNVELGETAARHLLEID-PEDSGTYVL 526
L+ + + +T +LL+ G +E+ E +++ + DS T +
Sbjct: 896 VLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIE 955
Query: 527 LAN 529
L N
Sbjct: 956 LIN 958
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 180/456 (39%), Gaps = 64/456 (14%)
Query: 109 STYARMHQSGVLPSGFTFSSVLNAC--GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLG 166
S M GV T+S +++ GR +G VH +V G + +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG-LVH-EMVSHGINIKPYMYDCCIC 355
Query: 167 MYAKSGCVCDARDVFDGMDDRDVV----AWTAMICGYAKVAMMVEARWLFDNMGERN--- 219
+ +K G + A+ +FDGM ++ A+ ++I GY + + + L M +RN
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 220 -SFTWTTMVAGYASCGD---------------------------------------MKAA 239
+T+ T+V G S GD M+
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 240 KELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQN 296
KE+ + D + ++I G K + EAR + + +A T+ A ++ Y +
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISA-CAQLRDIRMSNALTDHIEEGCCDRTLIV 355
+ KE+R+ + +V G I+ C + + I +A +++G
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 356 SNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMP 411
+ L+N K +D A F MR + D+++Y +I F++ G Q A +F M
Sbjct: 596 T-VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 412 KEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQL 471
+EGL PN + + +L SG +E+ M+ V + P Y I+D ++G L
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS-VKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 472 ERAYSLIKE---NATSADATTWGSLLAACRVHGNVE 504
A+ L E D+ + +L+ C +VE
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 153/357 (42%), Gaps = 42/357 (11%)
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK 170
+ M G+ P F++ ++N ++ M + + +V+ G N I+ LLG + +
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 171 SGCVCDARDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFT 222
SG + A+++ D M + + V + +I GY K + EA LFD M + +SF
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 223 WTTMVAGYASCGDMKAAKELYDVMSDKDG-----------VTWVAMIAGYGKLGNVTEA- 270
+TT+V G D++ A ++ ++K G + WV +GK TE
Sbjct: 735 YTTLVDGCCRLNDVERAITIFG--TNKKGCASSTAPFNALINWV---FKFGKTELKTEVL 789
Query: 271 RRLFDG----IPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAIS 326
RL DG P D T+ M+ + G + E+F +++ A + T + ++
Sbjct: 790 NRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 327 ACAQL-RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRD-- 383
++ R M + I G + I+ + +IN K G A M ++
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAG-IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907
Query: 384 -------MYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN-ACSSS 432
+ T A+++ FA+ G+ + A + M + P+ T I ++N +C SS
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISS 964
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%)
Query: 325 ISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDM 384
+CA L+ + S + DH + ++N +I+M +C +I A R F M +DM
Sbjct: 243 FESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDM 302
Query: 385 YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQI 444
++ M+ A++++G DA+ LF M K GLKPN+ TF+ V AC++ G +EE F
Sbjct: 303 DSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDS 362
Query: 445 MTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVE 504
M I P EHY ++ +LG+ G L A I++ A W ++ R+HG+++
Sbjct: 363 MKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDID 422
Query: 505 LGETAARHLLEIDP 518
L + ++++DP
Sbjct: 423 LEDYMEELMVDVDP 436
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 9/181 (4%)
Query: 118 GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDA 177
G +P F + +C + ++ K+VH +QS F G+ + ++ M+ + + DA
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 178 RDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASC 233
+ VFD M D+D+ +W M+C Y+ M +A LF+ M + N T+ T+ A+
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 234 GDMKAAKELYDVMSDKDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAA 288
G ++ A +D M ++ G++ ++ ++ GK G++ EA + +P A W A
Sbjct: 351 GGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEA 410
Query: 289 M 289
M
Sbjct: 411 M 411
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 230 YASCGDMKA---AKELYD-VMSDK---DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQD 282
+ SC ++K+ +K+++D + K D +I+ +G+ ++T+A+R+FD + V +D
Sbjct: 243 FESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHM-VDKD 301
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDI 334
+W M+ Y+ NG + + +F+E+ + +K E + ACA + I
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 196/458 (42%), Gaps = 32/458 (6%)
Query: 62 LNFSSEKSNICYAHKLFDTMPNC---PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSG 118
+N+ +S + A + M P SL+ F H ++ +M + G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGF-CHGNRISEAVALVDQMVEMG 175
Query: 119 VLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDAR 178
P TF+++++ + E + R+V G + + A++ K G A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 179 DVFDGMD----DRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGY 230
++ + M+ + DVV + +I G K M +A LF+ M + + FT+ +++
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 231 ASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQ----D 282
+ G A L M +K D V + A+I + K G + EA +L+D + + D
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
+ ++ + + +EG+E+F+E+ Q + V I Q RD + +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDM----YTYSAMITAFAEHG 398
+ ++ N L++ GN++ A F M+ RDM TY+ MI A + G
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 399 KSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH- 457
K +D DLF + +G+KPN VT+ +++ GL EE F M + PLP
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK---EDGPLPNSG 532
Query: 458 -YACIVDLLGRAGQLERAYSLIKENAT---SADATTWG 491
Y ++ R G + LIKE + + DA+T+G
Sbjct: 533 TYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/489 (20%), Positives = 205/489 (41%), Gaps = 27/489 (5%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P ++ L+ A ++ F IS +M G+ + +T+S +N R +
Sbjct: 73 PSIVEFSKLLSA-IAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
+ G++++ G+G + + +LL + + +A + D M + D V +T ++ G
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 201 KVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGV 252
+ EA L + M + + T+ ++ G G+ A L + M + D V
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
+ +I G K ++ +A LF+ + + D T+ +++C G + + ++
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDH-IEEGCCDRTLIVSNALINMHSKCGN 368
+ I V I A + + + L D ++ C ++ N LI K
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 369 IDLAWREFSTMRCRDM----YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIG 424
++ F M R + TY+ +I F + +A +F +M +G+ P+ +T+
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 425 VLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL---IKEN 481
+L+ ++G VE F+ M D++ Y +++ L +AG++E + L +
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKR-DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 482 ATSADATTWGSLLAACRVHGNVELGETAARHLLEIDP-EDSGTY-VLLANMYASQDKWVG 539
+ T+ ++++ G E + + E P +SGTY L+ D+
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 540 AEVVKKLMS 548
AE++K++ S
Sbjct: 551 AELIKEMRS 559
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 4/261 (1%)
Query: 259 AGYGKLGNVTEARRLFDGIPVPQDASTWAAM--LACYAQNGYAKEGIEMFKEVRQAKIKI 316
+ YG GN G QD S +++ L + G K+ +E+ K R +
Sbjct: 120 SSYGTTGNGVPQENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEIIKSWRNEGYVV 179
Query: 317 TEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF 376
+ C + ++ + + + I + N++I M+S CG+++ A F
Sbjct: 180 DLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVF 239
Query: 377 STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
++M R++ T+ +I FA++G+ +DAID F R +EG KP+ F + AC G +
Sbjct: 240 NSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMN 299
Query: 437 EGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAA 496
EG F+ M + I P EHY +V +L G L+ A ++ + D W +L+
Sbjct: 300 EGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNVD--LWETLMNL 357
Query: 497 CRVHGNVELGETAARHLLEID 517
RVHG++ LG+ + ++D
Sbjct: 358 SRVHGDLILGDRCQDMVEQLD 378
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 175/396 (44%), Gaps = 80/396 (20%)
Query: 67 EKSNICYAHKLFDTMPNC---PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSG 123
+ ++ YA LFD M N PD ++TSL+ L + +R S M + + P
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG-LCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 124 FTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDG 183
TF+++++A + ++ ++++ +++ N T+L+ + GCV +AR +F
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 184 MDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGD 235
M+ + DVVA+T++I G+ K + +A +F M ++ N+ T+TT++ G+ G
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 236 MKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQ 295
A+E++ M + VP + T+ +L C
Sbjct: 368 PNVAQEVFSHMVSRG----------------------------VPPNIRTYNVLLHCLCY 399
Query: 296 NGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIV 355
NG K+ + +F+++++ + M G +I N L
Sbjct: 400 NGKVKKALMIFEDMQKRE-------MDGVAP------NIWTYNVL--------------- 431
Query: 356 SNALINMHSKC--GNIDLAWREFSTMRCRDM----YTYSAMITAFAEHGKSQDAIDLFFR 409
+H C G ++ A F MR R+M TY+ +I + GK ++A++LF
Sbjct: 432 ------LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCS 485
Query: 410 MPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM 445
+P +G+KPN VT+ +++ GL E F+ M
Sbjct: 486 LPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 162/402 (40%), Gaps = 21/402 (5%)
Query: 100 HRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKI 159
H F + + M +S LPS F+ +LN ++ + L G +
Sbjct: 49 HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLY 108
Query: 160 VQTALLGMYAKSGCVCDARDVFDGMD----DRDVVAWTAMICGYAKVAMMVEARWLFDNM 215
L+ + +S A M + D+V +T++I G+ M EA + + M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 216 GER----NSFTWTTMVAGYASCGDMKAAKELYDVMSD----KDGVTWVAMIAGYGKLGNV 267
E + +TT++ G + A L+D M + D V + +++ G G
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 268 TEARRLFDGI---PVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGA 324
+A L G+ + D T+ A++ + + G + E++ E+ + I
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 325 ISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDM 384
I+ + + + +E C ++ +LIN KC +D A + F M + +
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 385 ----YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCR 440
TY+ +I F + GK A ++F M G+ PN T+ +L+ +G V++
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 441 FFQIMTG--VFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE 480
F+ M + + P Y ++ L G+LE+A + ++
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 122/289 (42%), Gaps = 13/289 (4%)
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
D T+ +++ + +E + M ++ + IK V I + + + + +L
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCG---NIDLAWREFSTMRCR-DMYTYSAMITAFAEH 397
D +E +++ +L+N G + D R + + + D+ T++A+I AF +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 398 GKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM--TGVFDIEPLP 455
GK DA +L+ M + + PN T+ ++N G V+E + F +M G F P
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF---PDV 317
Query: 456 EHYACIVDLLGRAGQLERAYSLIKE---NATSADATTWGSLLAACRVHGNVELGETAARH 512
Y +++ + +++ A + E + + T+ +L+ G + + H
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 513 LLEID-PEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSW 560
++ P + TY +L + K A ++ + M K+ + + W
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 205/469 (43%), Gaps = 47/469 (10%)
Query: 61 VLNFSSEKSNICYAHKLFDT---------MPNCPDAFIWTSLIRAFLSHRAHFRHCISTY 111
++ SS + C++ ++ D M PD F +T+LI H ++
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA-SEAVALV 211
Query: 112 ARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKS 171
+M Q G P T+ +V+N + + + ++ + + ++ ++ K
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 172 GCVCDARDVFDGMDDR----DVVAWTAMI---CGYAKVAMMVEARWLFDNMGER----NS 220
+ DA ++F MD++ DV ++++I C Y + + +A L +M ER N
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS---DASRLLSDMIERKINPNV 328
Query: 221 FTWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDG 276
T++ ++ + G + A++LYD M D D T+ ++I G+ + EA+ +F+
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE- 387
Query: 277 IPVPQD----ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
+ + +D T++ ++ + + +EG+E+F+E+ Q + V I Q R
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF-----STMRCRDMYTY 387
D + + + ++ N L++ K G + A F STM D+YTY
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME-PDIYTY 506
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTG 447
+ MI + GK +D +LF + +G+ PN + + +++ G EE + M
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK- 565
Query: 448 VFDIEPLPEH--YACIVDLLGRAGQLERAYSLIKENAT---SADATTWG 491
+ PLP Y ++ R G E + LIKE + + DA+T G
Sbjct: 566 --EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 612
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 153/381 (40%), Gaps = 55/381 (14%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P + L+ A ++ F IS +M G+ +T+S +N R +
Sbjct: 81 PSIVEFNKLLSA-VAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
V ++++ G+ + + ++LL Y S + DA + D M + D +T +I G
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 201 KVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGV 252
EA L D M +R + T+ T+V G GD+ A L M + D V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 253 TWVAMIAGYGKLGNVTEARRLF---DGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
+ +I G K ++ +A LF D + D T++++++C G + + ++
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
+ KI + ++ +ALI+ K G +
Sbjct: 320 IERKI-----------------------------------NPNVVTFSALIDAFVKEGKL 344
Query: 370 DLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
A + + M R D++TYS++I F H + +A +F M + PN VT+ +
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 426 LNACSSSGLVEEGCRFFQIMT 446
+ + VEEG F+ M+
Sbjct: 405 IKGFCKAKRVEEGMELFREMS 425
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%)
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
G +E +E+ + + + ++G C + + + + + I +
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
NA+I M+S C ++D A + F M + T M+ F +G ++AIDLF R +EG K
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYS 476
PN F V + C+ +G V+EG FQ M + I P EHY + +L +G L+ A +
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 477 LIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEID 517
++ W +L+ RVHG+VELG+ A + ++D
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 66/414 (15%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD +T LI A + R + +M P T+ ++L+ + KQ
Sbjct: 291 PDVVTYTVLIDALCTAR-KLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV----AWTAMICGYA 200
+ + G + + T L+ K+G +A D D M D+ ++ + +ICG
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 201 KVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGV 252
+V + +A LF NM + ++T+ + Y GD +A E ++ M K + V
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIP----VPQDASTWAAMLACYAQNGYAKEGIEMFKE 308
A + K G EA+++F G+ VP D+ T+ M+ CY++ G E I++ E
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVP-DSVTYNMMMKCYSKVGEIDEAIKLLSE 528
Query: 309 VRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGN 368
+ +E GC + +IV N+LIN K
Sbjct: 529 M----------------------------------MENGC-EPDVIVVNSLINTLYKADR 553
Query: 369 IDLAWREFSTMRCRDM------YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+D AW+ F MR ++M TY+ ++ ++GK Q+AI+LF M ++G PN +TF
Sbjct: 554 VDEAWKMF--MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPE--HYACIVDLLGRAGQLERA 474
+ + + +E +++ + D+ +P+ Y I+ L + GQ++ A
Sbjct: 612 NTLFDCLCKN---DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 125/325 (38%), Gaps = 53/325 (16%)
Query: 222 TWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGI 277
T+ ++ Y G + ELY MS + + +T +I+G K GNV +A L+ +
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 278 PVPQD----ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRD 333
+D A T+ ++ +++G E ++F+ + G CA
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD----------YGCRPNCA---- 927
Query: 334 IRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSA 389
+ N LIN K G D A F M D+ TYS
Sbjct: 928 ---------------------IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 390 MITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVF 449
++ G+ + + F + + GL P+ V + ++N S +EE F M
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 450 DIEPLPEHYACIVDLLGRAGQLERA---YSLIKENATSADATTWGSLLAACRVHGNVELG 506
I P Y ++ LG AG +E A Y+ I+ + T+ +L+ + G E
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086
Query: 507 ETAARHLLE--IDPEDSGTYVLLAN 529
+ ++ P ++GTY L N
Sbjct: 1087 YAVYQTMVTGGFSP-NTGTYEQLPN 1110
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 164/373 (43%), Gaps = 59/373 (15%)
Query: 112 ARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKS 171
+M + G P TF+S+LN + + + +++ GF N + T L+ K+
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 172 GCVCDARDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTW 223
+ A ++F+ M +VV + A++ G ++ +A WL +M +R N T+
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 224 TTMVAGYASCGDMKAAKELYDVMSD----KDGVTWVAMIAGYGKLGNVTEARRLFDGIP- 278
T ++ + G + AKELY+VM D T+ ++I G G + EAR++F +
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 279 ---VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQA---------KIKITEVAMVGAIS 326
P + + ++ + ++ ++G+++F E+ Q + I +VG
Sbjct: 322 NGCYPNEV-IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 327 ACAQL----------RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF 376
++ DIR N L D + CC+ G ++ A F
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGL---CCN----------------GKVEKALMIF 421
Query: 377 STMRCRDM----YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS 432
MR R+M TY+ +I + GK +DA DLF + +G+KPN +T+ +++
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 433 GLVEEGCRFFQIM 445
GL+ E F+ M
Sbjct: 482 GLIHEADSLFKKM 494
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 115/275 (41%), Gaps = 27/275 (9%)
Query: 248 DKDGVTWVAMIAGYGKLGNVTEARRLFD---GIPVPQDASTWAAMLACYAQNGYAKEGIE 304
+ D VT+ +++ GY + +A LFD G+ + T+ ++ C +N + +E
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 305 MFKEVRQAKIK---ITEVAMVGAISACAQLRDIR--MSNALTDHIEEGCCDRTLIVSNAL 359
+F ++ + +T A+V + + D + + + IE +I AL
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN-----VITFTAL 264
Query: 360 INMHSKCGNIDLAWREFSTM----RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
I+ K G + A ++ M D++TY ++I +G +A +F+ M + G
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 416 KPNQVTFIGVLNACSSSGLVEEGCRFFQ------IMTGVFDIEPLPEHYACIVDLLGRAG 469
PN+V + +++ S VE+G + F ++ L + Y L+GR
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC----LVGRPD 380
Query: 470 QLERAYSLIKENATSADATTWGSLLAACRVHGNVE 504
+ ++ + D T+ LL +G VE
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 191/437 (43%), Gaps = 40/437 (9%)
Query: 85 PDAFIWTSLIRAFLSH-RAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGK 143
PD+F + +LI H RA ++ RM G P T+ V+N + +
Sbjct: 184 PDSFTFNTLIHGLFRHNRAS--EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 144 QVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMI--- 196
+ ++ Q ++ ++ V DA ++F MD++ +VV + ++I
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 197 CGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS----D 248
C Y + + +A L +M ER N T++ ++ + G + A++LYD M D
Sbjct: 302 CNYGRWS---DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 249 KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQD----ASTWAAMLACYAQNGYAKEGIE 304
D T+ ++I G+ + EA+ +F+ + + +D T+ ++ + + EG+E
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRD-----IRMSNALTDHIEEGCCDRTLIVSNAL 359
+F+E+ Q + V I Q R+ I ++D + ++++
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 360 INMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
N + + + + S M D+YTY+ MI + GK +D DLF + +G+KPN
Sbjct: 478 NNGKVETALVVFEYLQRSKME-PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 420 VTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH--YACIVDLLGRAGQLERAYSL 477
VT+ +++ GL EE F+ M + PLP+ Y ++ R G + L
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMK---EEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 478 IKENATS---ADATTWG 491
I+E + DA+T G
Sbjct: 594 IREMRSCRFVGDASTIG 610
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/512 (19%), Positives = 211/512 (41%), Gaps = 36/512 (7%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVL 120
V++ + N+ +H L+ ++ LI F R+ ++ A+M + G
Sbjct: 100 VISLGEQMQNLGISHNLY----------TYSILINCF-CRRSQLSLALAVLAKMMKLGYE 148
Query: 121 PSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV 180
P T +S+LN + + + G++V+ G+ + L+ + +A +
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 181 FDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYAS 232
D M + D+V + ++ G K + A L M E + T++ +
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 233 CGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGI---PVPQDAST 285
++ A L+ M +K + VT+ ++I G ++A RL + + + T
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 286 WAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIE 345
++A++ + + G E +++ E+ + I I+ + + + + +
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 346 EGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDM----YTYSAMITAFAEHGKSQ 401
C ++ N LI K +D F M R + TY+ +I F + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACI 461
+A +F +M +G+ P+ +T+ +L+ ++G VE F+ + +EP Y +
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIM 507
Query: 462 VDLLGRAGQLERAYSL---IKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDP 518
++ + +AG++E + L + + T+ ++++ G E + R + E P
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 519 -EDSGTYVLLANMYASQ-DKWVGAEVVKKLMS 548
DSGTY L + DK AE+++++ S
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 192/431 (44%), Gaps = 23/431 (5%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P++ I+ +LI + LS + M G +P TF+ V+ + + E +
Sbjct: 250 PNSVIYQTLIHS-LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK 308
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
+ R++ GF + I L+ K G V A+D+F + ++V + +I G+
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR 368
Query: 205 MVEARWLFDNMGERNSF-----TWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWV 255
+ +A+ + +M T+ +++ GY G + A E+ M +K + ++
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 256 AMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQA 312
++ G+ KLG + EA + + + + + + +++ + + E +E+F+E+ +
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 313 KIKITEVAMVGAISACAQLRDIRMSN-ALTDHIEEGCCDRTLIVSNALINMHSKCGNIDL 371
K IS ++ +I+ + L D I EG T + N LIN + G I
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT-VTYNTLINAFLRRGEIKE 547
Query: 372 AWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLN 427
A + + M + D TY+++I G+ A LF +M ++G P+ ++ ++N
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 428 ACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE---NATS 484
SG+VEE F + M + P + +++ L RAG++E ++ ++
Sbjct: 608 GLCRSGMVEEAVEFQKEMV-LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 485 ADATTWGSLLA 495
D T+ +L++
Sbjct: 667 PDTVTFNTLMS 677
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 167/393 (42%), Gaps = 71/393 (18%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSH------RAHFRHCISTYARMHQSGVLPSGFTFS 127
A LF +P P+ I+ +LI F++H +A +++Y G++P T++
Sbjct: 341 AKDLFYRIPK-PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY------GIVPDVCTYN 393
Query: 128 SVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD-- 185
S++ + + +V + G N T L+ + K G + +A +V + M
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 186 --DRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAA 239
+ V + +I + K + EA +F M + + +T+ ++++G ++K A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 240 K-ELYDVMSD---KDGVTWVAMIAGYGKLGNVTEARRL-----FDGIPVPQDASTWAAML 290
L D++S+ + VT+ +I + + G + EAR+L F G P+ D T+ +++
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL--DEITYNSLI 571
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
+ G + +F+++ LRD + ++
Sbjct: 572 KGLCRAGEVDKARSLFEKM---------------------LRDGHAPSNIS--------- 601
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDL 406
N LIN + G ++ A M R D+ T++++I G+ +D + +
Sbjct: 602 -----CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 407 FFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGC 439
F ++ EG+ P+ VTF +++ G V + C
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 137/321 (42%), Gaps = 19/321 (5%)
Query: 219 NSFTWTTMVAGYASCGDMKAAKELYDVM----SDKDGVTWVAMIAGYGKLGNVTEARRLF 274
NS + T++ + C + A +L + M D T+ +I G K + EA ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 275 DGIPV---PQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQL 331
+ + + D T+ ++ + G ++F + + +I I + G ++ +L
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH-GRL 369
Query: 332 RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMR---CR-DMYTY 387
D + L+D + + N+LI + K G + LA MR C+ ++Y+Y
Sbjct: 370 DDAKA--VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTG 447
+ ++ F + GK +A ++ M +GLKPN V F +++A + E F+ M
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 448 VFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE---NATSADATTWGSLLAACRVHGNV- 503
+P + ++ L +++ A L+++ A+ T+ +L+ A G +
Sbjct: 488 K-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 504 ELGETAARHLLEIDPEDSGTY 524
E + + + P D TY
Sbjct: 547 EARKLVNEMVFQGSPLDEITY 567
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 175/385 (45%), Gaps = 30/385 (7%)
Query: 85 PDAFIWTSLIRA-FLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGK 143
P+ + +LI FL ++A ++ RM G P FT+ +V+N + +
Sbjct: 183 PNTVTFNTLIHGLFLHNKAS--EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 144 QVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMI--- 196
+ ++ + + ++ T ++ V DA ++F MD++ +VV + ++I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 197 CGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS----D 248
C Y + + +A L +M ER N T++ ++ + G + A++LYD M D
Sbjct: 301 CNYGRWS---DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 249 KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQD----ASTWAAMLACYAQNGYAKEGIE 304
D T+ ++I G+ + EA+ +F+ + + +D T+ ++ + + +EG+E
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+F+E+ Q + V I Q D M+ + + +I + L++
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 365 KCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQV 420
K G ++ A F ++ D+YTY+ MI + GK +D DLF + +G+KPN +
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 421 TFIGVLNACSSSGLVEEGCRFFQIM 445
+ +++ GL EE F+ M
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREM 561
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 184/403 (45%), Gaps = 62/403 (15%)
Query: 118 GVLPSGFTFSSVLNAC--GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVC 175
G+ P +T+++++NA R + VEG V + + G NK+ T L+ + K+G +
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEG--VLKVMKKDGVVYNKVTYTLLMELSVKNGKMS 311
Query: 176 DARDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMV 227
DA +FD M +R DV +T++I + M A LFD + E+ +S+T+ ++
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 228 AGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIP---VP 280
G G+M AA+ L + M K V + +I GY + G V EA ++D +
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 281 QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNAL 340
D T + +C+ + ++ + E +Q ++ E G + +L + +N
Sbjct: 432 ADVFTCNTIASCFNR-------LKRYDEAKQWLFRMME----GGV----KLSTVSYTN-- 474
Query: 341 TDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAE 396
LI+++ K GN++ A R F M + + TY+ MI A+ +
Sbjct: 475 ------------------LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Query: 397 HGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPE 456
GK ++A L M G+ P+ T+ +++ + V+E R F M G+ ++
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM-GLKGLDQNSV 575
Query: 457 HYACIVDLLGRAGQLERAYSL---IKENATSADATTWGSLLAA 496
Y ++ L +AG+ + A+ L +K + D + +L+ +
Sbjct: 576 TYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 127/269 (47%), Gaps = 23/269 (8%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNC---PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQS 117
++ S + + A KLFD M D ++TSLI ++ + + + + + +
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI-SWNCRKGNMKRAFLLFDELTEK 358
Query: 118 GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDA 177
G+ PS +T+ ++++ +V M + + + G ++V L+ Y + G V +A
Sbjct: 359 GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 178 RDVFDGMDDR----DVVAWTAMICGYAKVAMMVEAR-WLFDNMG---ERNSFTWTTMVAG 229
++D M+ + DV + + ++ EA+ WLF M + ++ ++T ++
Sbjct: 419 SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDV 478
Query: 230 YASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRL---FDGIPVPQD 282
Y G+++ AK L+ MS K + +T+ MI Y K G + EAR+L + + D
Sbjct: 479 YCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPD 538
Query: 283 ASTWAAML--ACYAQNGYAKEGIEMFKEV 309
+ T+ +++ C A N E + +F E+
Sbjct: 539 SYTYTSLIHGECIADN--VDEAMRLFSEM 565
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 113 RMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
RM + GV S +++++++ + + E K++ + G N I ++ Y K G
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 173 CVCDARDVFDGMD----DRDVVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWT 224
+ +AR + M+ D D +T++I G + EA LF MG ++NS T+T
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 225 TMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIA 259
M++G + G A LYD M K D + A+I
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 200/460 (43%), Gaps = 93/460 (20%)
Query: 88 FIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV-- 145
+ +++LI A+ H IS + M + G+ P+ T+++V++ACG+ +E KQV
Sbjct: 269 YAFSALISAYGRSGLH-EEAISVFNSMKEYGLRPNLVTYNAVIDACGK--GGMEFKQVAK 325
Query: 146 -HGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
+ ++G ++I +LL + ++ G AR++FD M +R +
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI--------------- 370
Query: 205 MVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAG 260
E++ F++ T++ G M A E+ M K + V++ +I G
Sbjct: 371 ------------EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 261 YGKLGNVTEARRLFDG---IPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK-- 315
+ K G EA LF + + D ++ +L+ Y + G ++E +++ +E+ IK
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 316 -ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLA-- 372
+T A++G + +++ T+ E L+ + LI+ +SK G A
Sbjct: 479 VVTYNALLGGYGKQGKYDEVK--KVFTEMKREHVLP-NLLTYSTLIDGYSKGGLYKEAME 535
Query: 373 -WREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACS 430
+REF + R D+ YSA+I A ++G A+ L M KEG+ PN VT+ +++A
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Query: 431 SSGLVE------------------------EGCRFFQIMTGVF---------DIEPLPEH 457
S ++ EG R Q+ + D E +
Sbjct: 596 RSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQE 655
Query: 458 YACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAAC 497
+CI+++ + QLE IK N T+ ++L AC
Sbjct: 656 LSCILEVFRKMHQLE-----IKPN-----VVTFSAILNAC 685
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 178/389 (45%), Gaps = 35/389 (8%)
Query: 127 SSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDD 186
S++++ GR + K++ G+G +AL+ Y +SG +A VF+ M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 187 ----RDVVAWTAMI--CGYAKVAMMVEARWLFDNMGERNS-----FTWTTMVAGYASCGD 235
++V + A+I CG + A++ FD M +RN T+ +++A + G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKF-FDEM-QRNGVQPDRITFNSLLAVCSRGGL 354
Query: 236 MKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQ---DASTWAA 288
+AA+ L+D M+++ D ++ ++ K G + A + +PV + + +++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 289 MLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGC 348
++ +A+ G E + +F E+R I + V+ +S ++ + + +
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 349 CDRTLIVSNALINMHSKCGNIDLAWREFSTMR----CRDMYTYSAMITAFAEHGKSQDAI 404
+ ++ NAL+ + K G D + F+ M+ ++ TYS +I +++ G ++A+
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 405 DLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDL 464
++F GL+ + V + +++A +GLV MT I P Y I+D
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDA 593
Query: 465 LGRAGQLERAYSLIKENATSADATTWGSL 493
GR+ ++R SAD + GSL
Sbjct: 594 FGRSATMDR----------SADYSNGGSL 612
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 170/406 (41%), Gaps = 41/406 (10%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P+ + ++I A F+ + M ++GV P TF+S+L C R +
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 360
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
+ + + LL K G + A ++ M + +VV+++ +I G+A
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 420
Query: 201 KVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAA----KELYDVMSDKDGV 252
K EA LF M + ++ T+++ Y G + A +E+ V KD V
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
T+ A++ GYGK G E +++F + V + T++ ++ Y++ G KE +E+F+E
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
+ A ++ V I A + + + +L D + + ++ N++I+ + +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 370 DL---------------AWREFSTMRCRDMYTYSAMITAFAEHGKSQD----------AI 404
D A + + +T + + ++D +
Sbjct: 601 DRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCIL 660
Query: 405 DLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFD 450
++F +M + +KPN VTF +LNACS E+ + + +FD
Sbjct: 661 EVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR-LFD 705
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 355 VSNALINMHSKCGNIDLAWREFSTMRC----RDMYTYSAMITAFAEHGKSQDAIDLFFRM 410
+++A+I+ + G + +A R F T +Y +SA+I+A+ G ++AI +F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 411 PKEGLKPNQVTFIGVLNACSSSGL-VEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAG 469
+ GL+PN VT+ V++AC G+ ++ +FF M ++P + ++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRGG 353
Query: 470 QLERAYSLIKE---NATSADATTWGSLLAACRVHGNVEL 505
E A +L E D ++ +LL A G ++L
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 95/191 (49%)
Query: 328 CAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTY 387
C + ++ + + I L ++ L+ M+S CG + A F M +++ T+
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTG 447
+I FA++G +DAID+F R +EG P+ F G+ AC G V+EG F+ M+
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 448 VFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELGE 507
+ I P E Y +V++ G L+ A ++ + W +L+ RVHGN+ELG+
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 508 TAARHLLEIDP 518
A + +DP
Sbjct: 444 YCAEVVEFLDP 454
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 15/196 (7%)
Query: 133 CGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAW 192
CG + E K VHG++ S + LL MY+ G +A VF+ M ++++ W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 193 TAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAG-YASC---GDMKAAKELYDVMSD 248
+I +AK +A +F E + + G + +C GD+ ++ MS
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 249 KDGVT-----WVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNG------ 297
G+ +V+++ Y G + EA + +P+ + W ++ +G
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 298 YAKEGIEMFKEVRQAK 313
Y E +E R K
Sbjct: 444 YCAEVVEFLDPTRLNK 459
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 192/437 (43%), Gaps = 40/437 (9%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD +T+L+ H ++ RM G P T+ +V+N +
Sbjct: 168 PDTVTFTTLVHGLFQHNKA-SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMI---C 197
+ ++ + + ++ + ++ K V DA ++F MD++ DV ++++I C
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 198 GYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS----DK 249
Y + + +A L +M ER N T+ +++ +A G + A++L+D M D
Sbjct: 287 NYGRWS---DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLF------DGIPVPQDASTWAAMLACYAQNGYAKEGI 303
+ VT+ ++I G+ + EA+++F D +P D T+ ++ + + +G+
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP---DVVTYNTLINGFCKAKKVVDGM 400
Query: 304 EMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMH 363
E+F+++ + + V I Q D + + + ++ N L++
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 364 SKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
K G ++ A F ++ D+YTY+ M + GK +D DLF + +G+KP+
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 420 VTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH--YACIVDLLGRAGQLERAYSL 477
+ + +++ GL EE F M + PLP+ Y ++ R G + L
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMK---EDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 478 IKENAT---SADATTWG 491
IKE + + DA+T+G
Sbjct: 578 IKEMRSCRFAGDASTYG 594
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 190/444 (42%), Gaps = 24/444 (5%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P ++ L+ A ++ F IS +M GV + +T++ ++N R +
Sbjct: 63 PSIVEFSKLLSA-IAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
+ G++++ G+G + + +LL + + +A + D M + D V +T ++ G
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 201 KVAMMVEARWLFDNM----GERNSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGV 252
+ EA L + M + + T+ ++ G G+ A L + M + D V
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 253 TWVAMIAGYGKLGNVTEARRLF---DGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
+ +I K +V +A LF D + D T++++++C G + + ++
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
+ KI V I A A+ + + L D + + D ++ N+LIN +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 370 DLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
D A + F+ M + D+ TY+ +I F + K D ++LF M + GL N VT+ +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERA---YSLIKENA 482
++ + + F+ M + P Y ++D L + G+LE+A + ++++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 483 TSADATTWGSLLAACRVHGNVELG 506
D T+ + G VE G
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDG 504
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 175/395 (44%), Gaps = 31/395 (7%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD +T+LI H ++ RM Q G P+ T+ V+N + +
Sbjct: 188 PDTITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMI---C 197
+ ++ + N ++ + ++ K DA ++F M+++ +V+ ++++I C
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 198 GYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS----DK 249
Y + + +A L +M ER N T+ ++ + G + A++LYD M D
Sbjct: 307 NYERWS---DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQD----ASTWAAMLACYAQNGYAKEGIEM 305
D T+ ++I G+ + EA+ +F+ + + +D T+ ++ + + EG+E+
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
F+E+ Q + V I Q RD + + + ++ N L++ K
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 366 CGNIDLAWREFSTMRCRDM----YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVT 421
G ++ A F ++ M YTY+ MI + GK +D DLF + +G+KP+ +
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPE 456
+ +++ GL EE F+ M + PLP+
Sbjct: 543 YNTMISGFCRKGLKEEADALFRKMR---EDGPLPD 574
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 155/367 (42%), Gaps = 21/367 (5%)
Query: 100 HRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKI 159
H I + M +S LPS F F+ +L+A ++ + ++ + G N
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 160 VQTALLGMYAKSGCVCDARDVFDGM----DDRDVVAWTAMICGYAKVAMMVEARWLFDNM 215
L+ + + + A + M + +V ++++ GY + +A L D M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 216 GER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNV 267
E ++ T+TT++ G A L D M + + VT+ ++ G K G++
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 268 TEARRLFDGI---PVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGA 324
A L + + + + ++ ++ + + + + +F E+ ++ +
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 325 ISA-CAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR- 382
IS C R S L+D IE + ++ NALI+ K G + A + + M R
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 383 ---DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGC 439
D++TYS++I F H + +A +F M + PN VT+ ++N + ++EG
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 440 RFFQIMT 446
F+ M+
Sbjct: 421 ELFREMS 427
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 196/473 (41%), Gaps = 72/473 (15%)
Query: 104 FRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTA 163
+ S M G +P T+S VLN M + + + G + T
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 164 LLGMYAKSGCVCDARDVFDGMDD----RDVVAWTAMICGYAKVAMMVEARWLFDNMGER- 218
++ + K+G + AR F+ M + +VV +TA+I Y K + A LF+ M
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 219 ---NSFTWTTMVAGYASCGDMKAAKELYDVM--------------------SDKDGVTWV 255
N T++ ++ G+ G ++ A ++++ M + VT+
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVP---QDASTWAAMLACYAQNGYAKEGIEMFKEVRQA 312
A++ G+ K V EAR+L D + + + + A++ + G E E+ E+ +
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 313 KIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLA 372
T I +++ +++ + + E C +++ +I+ K G D A
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 373 WREFSTMR---CR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNA 428
++ M C+ ++ TY+AMI F GK + ++L RM +G+ PN VT+ +++
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 823
Query: 429 CSSSG-------LVEE-----------GCR---------FFQIM-----TGVFDIEPLPE 456
C +G L+EE G R F + + G D P
Sbjct: 824 CCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLS 883
Query: 457 HYACIVDLLGRAGQLERAYSLIKENATSAD-----ATTWGSLLAACRVHGNVE 504
Y ++D L +A +LE A L++E AT + ++T+ SL+ + + VE
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 187/470 (39%), Gaps = 48/470 (10%)
Query: 73 YAHKLFDTMPNC---PDAFIWTSLIRAFLSHRAHFRHCI-----STYARMHQSGVLPSGF 124
YA+KL M C P ++ LI + + + Y+ M +GV+ +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM 184
SS + V ++ GF + + +L + + A +F+ M
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 185 DD----RDVVAWTAMICGYAKVAMMVEARWLFDNMGE----RNSFTWTTMVAGYASCGDM 236
DV +T M+ + K ++ +AR F+ M E N T+T ++ Y +
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 237 KAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLAC 292
A EL++ M + + VT+ A+I G+ K G V +A ++F+ + +D
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 293 YAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRT 352
Y N + +T A++ ++ + R L D + C+
Sbjct: 630 YDDNS-------------ERPNVVTYGALLDGFCKSHRVEEAR---KLLDAMSMEGCEPN 673
Query: 353 LIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFF 408
IV +ALI+ K G +D A + M +YTYS++I + + + A +
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 409 RMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRA 468
+M + PN V + +++ G +E + Q+M +P Y ++D G
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK-GCQPNVVTYTAMIDGFGMI 792
Query: 469 GQLERAYSLIKE---NATSADATTWGSLLAACRVHGNVELGETAARHLLE 515
G++E L++ + + T+ L+ C +G +++ A +LLE
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV----AHNLLE 838
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 162/408 (39%), Gaps = 43/408 (10%)
Query: 71 ICYAHKLFDTMPN---CPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLP------ 121
+ YA++LF+TM + P+ +++LI + C + RM S +P
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC-QIFERMCGSKDVPDVDMYF 627
Query: 122 ----------SGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKS 171
+ T+ ++L+ + + E +++ + G N+IV AL+ K
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687
Query: 172 GCVCDARDVFDGMDDRDVVA----WTAMICGYAKVAMMVEARWLFDNMGER----NSFTW 223
G + +A++V M + A ++++I Y KV A + M E N +
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747
Query: 224 TTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIP- 278
T M+ G G A +L +M +K + VT+ AMI G+G +G + L + +
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807
Query: 279 --VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRM 336
V + T+ ++ +NG + +E++Q I ++
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN--KEFIE 865
Query: 337 SNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWR------EFSTMRCRDMYTYSAM 390
S L D I + L V LI+ K +++A R FS TY+++
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925
Query: 391 ITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
I + K + A LF M K+G+ P +F ++ + + E
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 160/416 (38%), Gaps = 62/416 (14%)
Query: 74 AHKLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNAC 133
A L +T PD +T LI L + F + RM + LP+ T+S++L C
Sbjct: 289 ALTLVETENFVPDTVFYTKLISG-LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 134 GRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM--------- 184
+ K+V ++ G + + +L+ Y SG A + M
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 185 -----------DDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASC 233
D+D + + + M+ A + + + +SFT AG
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN-VSSFTRCLCSAG---- 462
Query: 234 GDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGN-------VTEARRLFDGIP---VPQDA 283
++ + V+ + G ++ + Y K+ N + A LF+ + + D
Sbjct: 463 ----KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 284 STWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDH 343
T+ M+ + + G ++ + F E+R+ V I A + + + +N L +
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 344 IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRC-------RDMY----------- 385
+ C ++ +ALI+ H K G ++ A + F M C DMY
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM-CGSKDVPDVDMYFKQYDDNSERP 637
Query: 386 ---TYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
TY A++ F + + ++A L M EG +PNQ+ + +++ G ++E
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 122/577 (21%), Positives = 221/577 (38%), Gaps = 92/577 (15%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD F + ++R + F + Y M + P+ +TF +++ + + ++
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
+ + G N++ T L+ + G DAR +F M D VA A++ G+
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC 279
Query: 201 KVAMMVEARWLFDNMGERNSFT-----WTTMVAGYASCGDMKAAKELYDVMSDK----DG 251
K+ MVEA L + E++ F +++++ G A ELY M K D
Sbjct: 280 KLGRMVEAFELL-RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 252 VTWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKE 308
+ + +I G K G + +A +L +P + D + A++ G +EG
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG------ 392
Query: 309 VRQAKIKITEV-----AMVGAISACAQLRD--IRMSNALTDHIEEGCCDRTLIVSNALIN 361
R +++++E A I C+ R+ +R + + IE+ C ++ NALI+
Sbjct: 393 -RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 362 MHSKCGNIDLAW-----------------------REFSTM------------------- 379
K G + A R F TM
Sbjct: 452 GLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADT 511
Query: 380 -RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
D+ +Y+ +I F G A+ L + +GL P+ VT+ ++N G EE
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 439 CRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL----IKENATSADATTWGSLL 494
F++ D P Y ++ R ++ A++L +K+ + D T + +
Sbjct: 572 ---FKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDET--ANEI 626
Query: 495 AACRVHGNVELGETAARHLLEIDPEDS----GTYVLLANMYASQDKWVGAEVVKKLMSKK 550
C G E A R L+E+D G Y + ++ A +V ++ +K
Sbjct: 627 EQCFKEGET---ERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREK 683
Query: 551 GI--KKPSGYSWIQREISRQQTADSIKKKHFNLLADF 585
I PS I R+Q +I+ + L +F
Sbjct: 684 KILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNF 720
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/494 (20%), Positives = 204/494 (41%), Gaps = 66/494 (13%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD + +LI A+ S + M G P +T+++V+N + K+
Sbjct: 268 PDIVTYNTLISAY-SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVA----WTAMICGYA 200
V +++SG + +LL K G V + VF M RDVV +++M+ +
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 201 KVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGV 252
+ + +A F+++ E ++ +T ++ GY G + A L + M + D V
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
T+ ++ G K + EA +LF+ + + D+ T ++ + + G + +E+F+++
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
++ +I++ ++ N L++ K G+I
Sbjct: 507 KEKRIRLD-----------------------------------VVTYNTLLDGFGKVGDI 531
Query: 370 DLAWREFSTMRCRDMY----TYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
D A ++ M +++ +YS ++ A G +A ++ M + +KP + +
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIK-----E 480
+ SG +G F + M P Y ++ R + +A+ L+K +
Sbjct: 592 IKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 481 NATSADATTWGSLLAA-CRVHGNVELGETAARHLLE--IDPEDSGTYVLLANMYASQDKW 537
D T+ S+L CR ++ E R ++E ++P D TY + N + SQD
Sbjct: 651 GGLVPDVFTYNSILHGFCR-QNQMKEAEVVLRKMIERGVNP-DRSTYTCMINGFVSQDNL 708
Query: 538 VGAEVVKKLMSKKG 551
A + M ++G
Sbjct: 709 TEAFRIHDEMLQRG 722
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/529 (20%), Positives = 224/529 (42%), Gaps = 30/529 (5%)
Query: 58 LLRVLNFSSEKSNICYAHKLFDTMPNC-PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQ 116
LLR++ S S + + L T NC + ++ LIR ++ R R + +
Sbjct: 136 LLRMIR-RSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQAR-KLREAHEAFTLLRS 193
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
G S ++++ + R+ + V+ + +SG G N ++ K G +
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253
Query: 177 ARDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGERN----SFTWTTMVA 228
+ ++ D+V + +I Y+ +M EA L + M + +T+ T++
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 229 GYASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGI---PVPQ 281
G G + AKE++ M D T+ +++ K G+V E ++F + V
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
D +++M++ + ++G + + F V++A + V I + I ++ L
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEH 397
+ + + C ++ N +++ K + A + F+ M R D YT + +I +
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 398 GKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH 457
G Q+A++LF +M ++ ++ + VT+ +L+ G ++ + M +I P P
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPIS 552
Query: 458 YACIVDLLGRAGQLERAY----SLIKENATSADATTWGSLLAACRVHGNVELGETAARHL 513
Y+ +V+ L G L A+ +I +N + CR GN GE+ +
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR-SGNASDGESFLEKM 611
Query: 514 L-EIDPEDSGTYVLLANMYASQDKWVGA-EVVKKLMSKKGIKKPSGYSW 560
+ E D +Y L + ++ A +VKK+ ++G P +++
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 218/499 (43%), Gaps = 39/499 (7%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P+ F++ +LI + R F + RM + G+ P+ T+S +++ R +
Sbjct: 365 PNLFVYNALIDSLCKGR-KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD----VVAWTAMICGYA 200
G +V +G + +L+ + K G + A M ++ VV +T+++ GY
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 201 KVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSD----KDGV 252
+ +A L+ M + + +T+TT+++G G ++ A +L++ M++ + V
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
T+ MI GY + G++++A + + D ++ ++ G A E +
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALT---DHIEEGCCDRTLIVSNALINMHSKC 366
+ ++ E+ G + R+ ++ AL+ + ++ G D L+ LI+ K
Sbjct: 604 HKGNCELNEICYTGLLHGFC--REGKLEEALSVCQEMVQRGV-DLDLVCYGVLIDGSLKH 660
Query: 367 GNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+ L + M R D Y++MI A ++ G ++A ++ M EG PN+VT+
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 423 IGVLNACSSSGLVEEG---CRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIK 479
V+N +G V E C Q ++ V P Y C +D+L + G+++ ++
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSV----PNQVTYGCFLDILTK-GEVDMQKAVEL 775
Query: 480 ENAT----SADATTWGSLLAA-CRVHGNVELGETAARHLLEIDPEDSGTYVLLANMYASQ 534
NA A+ T+ L+ CR E E R + + D TY + N +
Sbjct: 776 HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRR 835
Query: 535 DKWVGAEVVKKLMSKKGIK 553
+ A + M++KGI+
Sbjct: 836 NDVKKAIELWNSMTEKGIR 854
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 155/406 (38%), Gaps = 61/406 (15%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P +TSL+ + S + + Y M G+ PS +TF+++L+ R + + +
Sbjct: 470 PTVVTYTSLMGGYCS-KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV----AWTAMICGYA 200
+ + + N++ ++ Y + G + A + M ++ +V ++ +I G
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 201 KVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAA----------------- 239
EA+ D + E N +T ++ G+ G ++ A
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 240 ----------------------KELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGI 277
KE++D D V + +MI K G+ EA ++D +
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 278 P----VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRD 333
VP + T+ A++ + G+ E E+ Q + G +
Sbjct: 709 INEGCVPNEV-TYTAVINGLCKAGFVNEA-EVLCSKMQPVSSVPNQVTYGCFLDILTKGE 766
Query: 334 IRMSNALTDH--IEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTM----RCRDMYTY 387
+ M A+ H I +G T N LI + G I+ A + M D TY
Sbjct: 767 VDMQKAVELHNAILKGLLANT-ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSG 433
+ MI + AI+L+ M ++G++P++V + +++ C +G
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 145/372 (38%), Gaps = 27/372 (7%)
Query: 74 AHKLFDTMPN---CPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVL 130
A KLF+ M P+ + +I + M + G++P +++ ++
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGY-CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 131 NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR--- 187
+ E K L + N+I T LL + + G + +A V M R
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 188 -DVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKEL 242
D+V + +I G K L M +R + +T+M+ + GD K A +
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 243 YDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGI-PVPQ--DASTWAAMLACYAQ 295
+D+M ++ + VT+ A+I G K G V EA L + PV + T+ L +
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 296 NGY-AKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEG----CCD 350
++ +E+ + + + T + C Q R S +T I +G C
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFR 409
T ++ N L + I+L W + R D Y+ +I G+ A +L
Sbjct: 825 YTTMI-NELCRRNDVKKAIEL-WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 410 MPKEGLKPNQVT 421
M ++GL PN T
Sbjct: 883 MLRQGLIPNNKT 894
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 190/435 (43%), Gaps = 36/435 (8%)
Query: 85 PDAFIWTSLIRA-FLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGK 143
P+ + +LI FL ++A ++ RM G P T+ V+N +
Sbjct: 184 PNTVTFNTLIHGLFLHNKAS--EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 144 QVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMI--- 196
+ ++ Q ++ ++ K + DA ++F M+ + +VV ++++I
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 197 CGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS----D 248
C Y + + +A L +M ER + FT++ ++ + G + A++LYD M D
Sbjct: 302 CNYGRWS---DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 249 KDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQ---DASTWAAMLACYAQNGYAKEGIEM 305
VT+ ++I G+ + EA+++F+ + D T+ ++ + + +EG+E+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 306 FKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
F+E+ Q + V I Q D M+ + + ++ N L++ K
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 366 CGNIDLAWREFSTMRCRDM----YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVT 421
G ++ A F ++ M YTY+ MI + GK +D DLF + +G+KP+ V
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 422 FIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH--YACIVDLLGRAGQLERAYSLIK 479
+ +++ G EE F+ M + LP Y ++ R G E + LIK
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMK---EDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 480 ENAT---SADATTWG 491
E + + DA+T G
Sbjct: 596 EMRSCGFAGDASTIG 610
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/488 (19%), Positives = 186/488 (38%), Gaps = 74/488 (15%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P ++ L+ A ++ F IS +M G+ + +T+S ++N R +
Sbjct: 79 PSIIEFSKLLSA-IAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
V G++++ G+ N + ++LL Y S + +A + D M + GY
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM----------FVTGY----- 182
Query: 205 MVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAG 260
+ N+ T+ T++ G A L D M K D VT+ ++ G
Sbjct: 183 ------------QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 261 YGKLGNVTEARRLFDGI---PVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKIT 317
K G+ A L + + + + ++ + + + + +FKE+ I+
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 318 EVAMVGAISA-CAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREF 376
V IS C R S L+D IE IN
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERK------------IN--------------- 323
Query: 377 STMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
D++T+SA+I AF + GK +A L+ M K + P+ VT+ ++N ++
Sbjct: 324 -----PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 437 EGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE---NATSADATTWGSL 493
E + F+ M P Y ++ + ++E + +E + T+ L
Sbjct: 379 EAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 494 LAACRVHGNVELGETAARHLLEID-PEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGI 552
+ G+ ++ + + ++ P + TY L + K A VV + + + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 553 KKPSGYSW 560
+P+ Y++
Sbjct: 498 -EPTIYTY 504
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 165/387 (42%), Gaps = 55/387 (14%)
Query: 61 VLNFSSEKSNICYAHKLFDTMPNC---PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQS 117
V+N ++ +I A L + M + I+ ++I + +R H + + M
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR-HVEVAVDLFTEMETK 287
Query: 118 GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDA 177
G+ P+ T++S++N + ++ +++ N + AL+ + K G + +A
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 178 RDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGERNSF----TWTTMVAG 229
+ + M R D + + +I G+ + EA+ +F M ++ T+ T++ G
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 230 YASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGI---PVPQD 282
+ C ++ EL+ MS + + VT+ +I G+ + G+ A+ +F + VP D
Sbjct: 408 FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
T++ +L G + +FK ++++++++
Sbjct: 468 IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN------------------------- 502
Query: 343 HIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR-DMYTYSAMITAFAEHGKSQ 401
+ + N +I K G + AW F ++ + D+ TY+ MI+ Q
Sbjct: 503 ----------IFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552
Query: 402 DAIDLFFRMPKEGLKPNQVTFIGVLNA 428
+A DLF +M ++G PN T+ ++ A
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 180/436 (41%), Gaps = 66/436 (15%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD F +T+LI H ++ +M Q G P T+ +V+N + +
Sbjct: 186 PDTFTFTTLIHGLFLHNKA-SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMI---C 197
+ ++ + N ++ ++ K V A D+F M+ + +VV + ++I C
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 198 GYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS----DK 249
Y + + +A L NM E+ N T+ ++ + G + A++L++ M D
Sbjct: 305 NYGRWS---DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLF------DGIPVPQDASTWAAMLACYAQNGYAKEGI 303
D +T+ +I G+ + EA+++F D +P Q T+ ++ + + ++G+
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ---TYNTLINGFCKCKRVEDGV 418
Query: 304 EMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMH 363
E+F+E+ Q +VG + + + + G CD +V ++
Sbjct: 419 ELFREMSQR-------GLVG--------NTVTYTTIIQGFFQAGDCDSAQMVFKQMV--- 460
Query: 364 SKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFI 423
S D+ TYS ++ +GK A+ +F + K ++ N +
Sbjct: 461 -------------SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 424 GVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL---IKE 480
++ +G V E F ++ I+P Y ++ L L+ A L +KE
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLS----IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 481 NATSADATTWGSLLAA 496
+ T ++ T+ +L+ A
Sbjct: 564 DGTLPNSGTYNTLIRA 579
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/446 (19%), Positives = 176/446 (39%), Gaps = 23/446 (5%)
Query: 90 WTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRL 149
+ ++R LS + + M +S PS F+ +L+A ++ + ++
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 150 VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM----DDRDVVAWTAMICGYAKVAMM 205
G + + + + + + A V M + D+V ++++ GY +
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 206 VEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAM 257
+A L D M E ++FT+TT++ G A L D M + D VT+ +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 258 IAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
+ G K G++ A L + + + + + ++ + + + +++F E+ I
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 315 KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWR 374
+ V I+ ++ L ++ E + ++ NALI+ K G + A +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 375 EFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACS 430
M R D TY+ +I F H + +A +F M + PN T+ ++N
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 431 SSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE---NATSADA 487
VE+G F+ M+ + Y I+ +AG + A + K+ N D
Sbjct: 410 KCKRVEDGVELFREMSQR-GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 488 TTWGSLLAACRVHGNVELGETAARHL 513
T+ LL +G ++ ++L
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYL 494
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 96/499 (19%), Positives = 207/499 (41%), Gaps = 27/499 (5%)
Query: 86 DAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQV 145
D + ++ I F R+ ++ A+M + G P T SS+LN + + +
Sbjct: 117 DLYTYSIFINCF-CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 146 HGRLVQSGFGGNKIVQTALL-GMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
++V+ G+ + T L+ G++ + +A + D M R D+V + ++ G
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNK-ASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 201 KVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGV 252
K + A L + M + N + T++ ++ A +L+ M K + V
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGI---PVPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
T+ ++I G ++A RL + + + T+ A++ + + G E ++ +E+
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
Q I + I+ + + + + C + N LIN KC +
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 370 DLAWREFSTMRCRDM----YTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGV 425
+ F M R + TY+ +I F + G A +F +M + + +T+ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 426 LNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA 485
L+ S G ++ F+ + ++E Y +++ + +AG++ A+ L +
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP 533
Query: 486 DATTWGSLLAACRVHGNVELGETAARHLLEIDP-EDSGTY--VLLANMYASQDKWVGAEV 542
D T+ ++++ ++ + R + E +SGTY ++ AN+ D+ AE+
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDC-DRAASAEL 592
Query: 543 VKKLMSKKGIKKPSGYSWI 561
+K++ S + S S +
Sbjct: 593 IKEMRSSGFVGDASTISLV 611
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 196/473 (41%), Gaps = 71/473 (15%)
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
M + + S T++ ++N + M E ++ HG + +SGF L+ Y K G
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 174 VCDARDVFDGMDDRDVVAWTAM----ICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAG 229
DA V D M + + T+ IC + +AR L +M + ++ T++ G
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHG 383
Query: 230 YASCGDMKAAKELYDVMSDKD----GVTWVAMIAGYGKLGNVTEARRLFDGIP---VPQD 282
Y G A L+D + D VT+ +I G + GN+ A+RL + + + D
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
Query: 283 ASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTD 342
T+ ++ + +NG E++ E+ + IK A A +LR A
Sbjct: 444 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY--TTRAVGELRLGDSDKAFRL 501
Query: 343 HIEEGCCDR---TLIVSNALINMHSKCGN----IDLAWREFSTMRCRDMYTYSAMITAFA 395
H E D L + N I+ K GN I+ + F D TY+ +I +
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 396 EHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLP 455
E+G+ + A +L+ M ++ L P+ +T +F ++ G
Sbjct: 562 ENGQFKMARNLYDEMLRKRLYPSVIT-------------------YFVLIYG-------- 594
Query: 456 EHYACIVDLLGRAGQLERAYSL---IKENATSADATTWGSLLAACRVHGNVELGETAARH 512
H +AG+LE+A+ +K+ + T +LL GN+ + A R+
Sbjct: 595 -H--------AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI---DEAYRY 642
Query: 513 LLEID----PEDSGTYVLLANMYASQDKWVGAEVVK--KLMSKKGIKKPSGYS 559
L +++ P + +Y +L + +KW EVVK K M K I +P GY+
Sbjct: 643 LCKMEEEGIPPNKYSYTMLISKNCDFEKW--EEVVKLYKEMLDKEI-EPDGYT 692
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/547 (21%), Positives = 223/547 (40%), Gaps = 93/547 (17%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P +T LI++ L ++ M ++G+ P+ T++ ++++ + ++
Sbjct: 321 PTVRTYTVLIKS-LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
+ G++++ G N I AL+ Y K G + DA DV + M+ R + + +I GY
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 201 KVAMMVEARWLFDNMGERNSF----TWTTMVAGYASCGDMKAAKELYDVMSDK----DGV 252
K + + +A + + M ER T+ +++ G G+ +A L +M+D+ D
Sbjct: 440 K-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
T+ +MI K V EA LFD + V + + A++ Y + G E M +++
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 310 RQAKI---KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKC 366
+T A++ + A +L++ + L + + + T+ LI+ K
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKE---ATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 367 GNIDLAWREFSTM------------------RCR---------------------DMYTY 387
G+ D A+ F M CR D++TY
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNAC------SSSGLVEEGCRF 441
S++I + + G++ A D+ RM G +P+Q TF+ ++ G E C
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 442 FQIM---TGVFDIEPLPEH--------YACIVDLLGRAGQL---ERAYSLIKEN-ATSAD 486
+M T V +E + EH Y ++ + G L E+ + ++ N S
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 487 ATTWGSLLA-ACRVHGNVELGETA-----ARHLLEIDPEDSGTYVLLANMYASQDKWVGA 540
+ +LL+ C++ + E + HL P+ VL+ +Y +K G
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL----PQLESCKVLICGLYKKGEKERGT 851
Query: 541 EVVKKLM 547
V + L+
Sbjct: 852 SVFQNLL 858
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 204/477 (42%), Gaps = 32/477 (6%)
Query: 110 TYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYA 169
Y M + V P+ +T++ ++N ++ + E Q ++V++G + T+L+ Y
Sbjct: 205 VYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYC 264
Query: 170 KSGCVCDARDVFDGMD----DRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSF---- 221
+ + A VF+ M R+ VA+T +I G + EA LF M + F
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324
Query: 222 TWTTMVAGYASCGDMKAAKELYDVMS-DKDGV-----TWVAMIAGYGKLGNVTEARRLFD 275
T+T ++ CG + ++ L V ++ G+ T+ +I +AR L
Sbjct: 325 TYTVLIKSL--CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 276 GI---PVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
+ + + T+ A++ Y + G ++ +++ + + K+ I +
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYS 388
+ L +E ++ N+LI+ + GN D A+R S M R D +TY+
Sbjct: 443 VHKAMGVLNKMLERKVLP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGV 448
+MI + + + ++A DLF + ++G+ PN V + +++ +G V+E + M
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 449 FDIEPLPEHYACIVDLLGRAGQLERAYSLIKEN----ATSADATTWGSLLAACRVHGNVE 504
+ P + ++ L G+L+ A +L++E +T L+ G+ +
Sbjct: 562 -NCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 505 LGETAARHLLEIDPE-DSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSW 560
+ + +L + D+ TY Y + + + AE + M + G+ P +++
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV-SPDLFTY 675
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 152/372 (40%), Gaps = 43/372 (11%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD +++LI L + RM + G P+ T ++++N + +
Sbjct: 140 PDTVTFSTLING-LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
+ R+V++GF N++ +L + KSG A ++ M++R D V ++ +I G
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 201 KVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMK-AAKELYDVMSDKDGVTWV 255
K + A LF+ M + + +TT++ G+ G AK L D++ K
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK------ 312
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
+ D ++A++ C+ + G +E E+ KE+ Q I
Sbjct: 313 -----------------------ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWRE 375
V I + + +N + D + C + N LIN + K ID
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 376 FSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSS 431
F M R D TY+ +I F E GK + A +LF M ++P+ V++ +L+
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 432 SGLVEEGCRFFQ 443
+G E+ F+
Sbjct: 470 NGEPEKALEIFE 481
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 140/364 (38%), Gaps = 102/364 (28%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD +++LI F+ R + M Q G+ P T++S+++ + + +
Sbjct: 315 PDVVAFSALIDCFVKE-GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
+ +V G G N L+ Y K+ + D ++F M R VVA
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA------------- 420
Query: 205 MVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKL 264
++ T+ T++ G+ G ++ AKEL+ M
Sbjct: 421 --------------DTVTYNTLIQGFCELGKLEVAKELFQEMV----------------- 449
Query: 265 GNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGA 324
+RR V D ++ +L NG ++ +E+F+++ ++K+++
Sbjct: 450 -----SRR------VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL-------- 490
Query: 325 ISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR-- 382
DI + N + G C+ + +D AW F ++ +
Sbjct: 491 --------DIGIYNIII----HGMCNAS---------------KVDDAWDLFCSLPLKGV 523
Query: 383 --DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF-------IGVLNACSSSG 433
D+ TY+ MI + G +A LF +M ++G PN T+ +G +A S+
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583
Query: 434 LVEE 437
L+EE
Sbjct: 584 LIEE 587
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 151/364 (41%), Gaps = 45/364 (12%)
Query: 217 ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDG----VTWVAMIAGYGKLGNVTEARR 272
E ++ T++T++ G G + A EL D M + +T A++ G G V++A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 273 LFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACA 329
L D + + T+ +L ++G +E+ +++ + KIK+ V I
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 330 QLRDIRMSNA--LTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----D 383
+D + NA L + +E +I+ LI G D + M R D
Sbjct: 259 --KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 384 MYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNA-CSSSGL-------- 434
+ +SA+I F + GK ++A +L M + G+ P+ VT+ +++ C + L
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 435 --VEEGC----RFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENATSADAT 488
V +GC R F I+ + C +L+ +L R SL AD
Sbjct: 377 LMVSKGCGPNIRTFNILINGY----------CKANLIDDGLELFRKMSL---RGVVADTV 423
Query: 489 TWGSLLAACRVHGNVELGETAARHLL--EIDPEDSGTYVLLANMYASQDKWVGAEVVKKL 546
T+ +L+ G +E+ + + ++ + P+ +LL + + + E+ +K+
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 547 MSKK 550
K
Sbjct: 484 EKSK 487
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 159/349 (45%), Gaps = 19/349 (5%)
Query: 108 ISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGM 167
+S +M + G P T S++N R + + + ++V+ G+ + + A++
Sbjct: 140 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 168 YAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGER----N 219
K+ V DA D F ++ + +VV +TA++ G + +A L +M ++ N
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 220 SFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFD 275
T++ ++ + G + AKEL++ M D D VT+ ++I G + EA ++FD
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 276 GIPVP---QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
+ D ++ ++ + + ++G+++F+E+ Q + V I Q
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYS 388
D+ + ++ + N L+ G ++ A F M+ R D+ TY+
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEE 437
+I + GK ++A LF + +GLKP+ VT+ +++ + GL+ E
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 153/357 (42%), Gaps = 55/357 (15%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD + ++I + L + + + G+ P+ T+++++N + +
Sbjct: 188 PDIVAYNAIIDS-LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGM----DDRDVVAWTAMICGYA 200
+ +++ N I +ALL + K+G V +A+++F+ M D D+V ++++I G
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 201 KVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGV 252
+ EA +FD M + + ++ T++ G+ ++ +L+ MS + + V
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 253 TWVAMIAGYGKLGNVTEARRLF---DGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
T+ +I G+ + G+V +A+ F D + D T+ +L NG ++ + +F+++
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
++ ++ + V I G C K G +
Sbjct: 427 QKREMDLDIVTYTTVI--------------------RGMC---------------KTGKV 451
Query: 370 DLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+ AW F ++ + D+ TY+ M++ G + L+ +M +EGL N T
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 176/439 (40%), Gaps = 88/439 (20%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNA---CGRVPAMVE 141
P + L+ A + + + IS +M G+ +TF+ V+N C +V +
Sbjct: 83 PSIVDFNRLLSAIVKLK-KYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL- 140
Query: 142 GKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDD----RDVVAWTAMIC 197
+ G++++ G+ +++ +L+ + + V DA + D M + D+VA+ A+I
Sbjct: 141 --SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 198 GYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGD-MKAAKELYDVMSDKDGV 252
K + +A F + + N T+T +V G + AA+ L D++ K
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK--- 255
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQA 312
+ + T++A+L + +NG E E+F+E+
Sbjct: 256 --------------------------ITPNVITYSALLDAFVKNGKVLEAKELFEEM--- 286
Query: 313 KIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLA 372
+RMS D ++ ++LIN ID A
Sbjct: 287 ---------------------VRMS-----------IDPDIVTYSSLINGLCLHDRIDEA 314
Query: 373 WREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNA 428
+ F M + D+ +Y+ +I F + + +D + LF M + GL N VT+ ++
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 429 CSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL---IKENATSA 485
+G V++ FF M F I P Y ++ L G+LE+A + +++
Sbjct: 375 FFQAGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 486 DATTWGSLLAACRVHGNVE 504
D T+ +++ G VE
Sbjct: 434 DIVTYTTVIRGMCKTGKVE 452
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 156/362 (43%), Gaps = 53/362 (14%)
Query: 189 VVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYD 244
V A A+I + K+ M+ E W++ M E +T+ ++ G S + +A+ +++
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 245 VMSD----KDGVTWVAMIAGYGKLGNVTEARRLFDGIPV---PQDASTWAAML-ACYAQN 296
VM D VT+ MI GY K G +A + D T+ M+ ACYA +
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 297 GYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVS 356
+ + +++E+ + I++ A I + EG + V
Sbjct: 307 DFG-SCVALYQEMDEKGIQVPPHAFSLVIGGLCK---------------EGKLNEGYTVF 350
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
+I SK ++ Y+ +I +A+ G +DAI L RM EG K
Sbjct: 351 ENMIRKGSK----------------PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPE-HYACIVDLLGRAGQL---E 472
P+ VT+ V+N +G VEE +F T FD + Y+ ++D LG+AG++ E
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFH--TCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 473 RAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSGTY---VLLAN 529
R + + E + D+ + +L+ A H V+ + + E + D Y +LL+
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 530 MY 531
M+
Sbjct: 513 MF 514
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 160/380 (42%), Gaps = 29/380 (7%)
Query: 127 SSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDD 186
++++ + G++ + E V ++ ++G L+ + V A VF+ M+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 187 ----RDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKA 238
D+V + MI GY K +A +M R + T+ TM+ + D +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 239 AKELYDVMSDKDGV-----TWVAMIAGYGKLGNVTEARRLFDGI---PVPQDASTWAAML 290
LY M D+ G+ + +I G K G + E +F+ + + + + ++
Sbjct: 311 CVALYQEM-DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
YA++G ++ I + + K V ++ ++ R+ AL D+ D
Sbjct: 370 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC--KNGRVEEAL-DYFHTCRFD 426
Query: 351 RTLIVS---NALINMHSKCGNIDLAWREFSTMR----CRDMYTYSAMITAFAEHGKSQDA 403
I S ++LI+ K G +D A R F M RD Y Y+A+I AF +H K +A
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Query: 404 IDLFFRM-PKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
I LF RM +EG T+ +L+ EE + + +M I P + +
Sbjct: 487 IALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK-GITPTAACFRALS 545
Query: 463 DLLGRAGQLERAYSLIKENA 482
L +G++ RA ++ E A
Sbjct: 546 TGLCLSGKVARACKILDELA 565
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 130/307 (42%), Gaps = 22/307 (7%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P AF SL+ L + + M + G P+ ++ +++ + ++ + +
Sbjct: 327 PHAF---SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDV-----FDGMDDRDVVAWTAMICGY 199
+ R++ GF + + + ++ K+G V +A D FDG+ + ++++I G
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF-YSSLIDGL 442
Query: 200 AKVAMMVEARWLFDNMGE----RNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGV--- 252
K + EA LF+ M E R+S+ + ++ + + A L+ M +++G
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 253 --TWVAMIAGYGKLGNVTEARRLFDGI---PVPQDASTWAAMLACYAQNGYAKEGIEMFK 307
T+ +++G K EA +L+D + + A+ + A+ +G ++
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 308 EVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCG 367
E+ + I + A I+ + I+ + L D I E + + +IN K G
Sbjct: 563 ELAPMGV-ILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVG 621
Query: 368 NIDLAWR 374
DLA +
Sbjct: 622 KADLAMK 628
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 201/487 (41%), Gaps = 46/487 (9%)
Query: 70 NICYAHKLFDTMPN---CPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTF 126
NI A LFD M P+ + +LI + R M G+ P+ ++
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK-IDDGFKLLRSMALKGLEPNLISY 278
Query: 127 SSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG-----CVCDARDVF 181
+ V+N R M E V + + G+ +++ L+ Y K G V A +
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 182 DGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMK 237
G+ V+ +T++I K M A D M R N T+TT+V G++ G M
Sbjct: 339 HGLTP-SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 238 AAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAML 290
A + M+D VT+ A+I G+ G + +A + + + + D +++ +L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 291 ACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISA-CAQLRDIRMSNALTDHIEEGCC 349
+ + ++ E + + +E+ + IK + I C Q R + + + G
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAID 405
+ ALIN + G+++ A + + M + D+ TYS +I + ++++A
Sbjct: 518 PDEFTYT-ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSS---------------SGLVEEGCRFFQIMTGVFD 450
L ++ E P+ VT+ ++ CS+ G++ E + F+ M G +
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK-N 635
Query: 451 IEPLPEHYACIVDLLGRAGQLERAYSLIKENATSA---DATTWGSLLAACRVHGNVELGE 507
+P Y ++ RAG + +AY+L KE S T +L+ A G V
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 508 TAARHLL 514
+ H+L
Sbjct: 696 SVIVHVL 702
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 201/466 (43%), Gaps = 71/466 (15%)
Query: 68 KSNICYAHKLFDTMPNC---PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGF 124
K NI +A +F M P+ F + LIR F + ++ + +M G LP+
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGF-CFAGNIDVALTLFDKMETKGCLPNVV 241
Query: 125 TFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQT-ALLGMYAKSGCVCDARDVFDG 183
T++++++ ++ R + GF K++++ AL G+
Sbjct: 242 TYNTLIDGYCKL-----------RKIDDGF---KLLRSMALKGL---------------- 271
Query: 184 MDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAA 239
+ +++++ +I G + M E ++ M R + T+ T++ GY G+ A
Sbjct: 272 --EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 240 KELYDVMS----DKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVP---QDASTWAAMLAC 292
++ M +T+ ++I K GN+ A D + V + T+ ++
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 293 YAQNGYAKEGIEMFKEVRQAKIK---ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
++Q GY E + +E+ +T A++ ++ D + A+ + ++E
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED---AIAVLEDMKEKGL 446
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAID 405
++ + +++ + ++D A R M + D TYS++I F E ++++A D
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 406 LFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPE--HYACIVD 463
L+ M + GL P++ T+ ++NA G +E+ Q+ + + LP+ Y+ +++
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA---LQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 464 LLGRAGQLERAYSLI----KENATSADATTWGSLLAACRVHGNVEL 505
L + + A L+ E + +D T+ +L+ C N+E
Sbjct: 564 GLNKQSRTREAKRLLLKLFYEESVPSDV-TYHTLIENC---SNIEF 605
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 156/391 (39%), Gaps = 18/391 (4%)
Query: 219 NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLF 274
N FT+ ++ G+ G++ A L+D M K + VT+ +I GY KL + + +L
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 275 DGIPVP---QDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQL 331
+ + + ++ ++ + G KE + E+ + + EV I +
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 332 RDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMR----CRDMYTY 387
+ + + + ++I +LI+ K GN++ A MR C + TY
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 388 SAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTG 447
+ ++ F++ G +A + M G P+ VT+ ++N +G +E+ + M
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 448 VFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE---NATSADATTWGSLLAA-CRVHGNV 503
+ P Y+ ++ R+ ++ A + +E D T+ SL+ C
Sbjct: 444 K-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 504 ELGETAARHLLEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGI-KKPSGYSWIQ 562
E + L P D TY L N Y + A + M +KG+ YS +
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 563 REISRQQTADSIKKKHFNLLADFS-QSDIFF 592
+++Q K+ L + S SD+ +
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 191/443 (43%), Gaps = 36/443 (8%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD +T+LI H ++ RM Q G P+ T+ V+N + +
Sbjct: 113 PDTITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMI---C 197
+ ++ + + ++ ++ K V DA ++F M+ + +VV ++++I C
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 198 GYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS----DK 249
Y + + +A L +M E+ N T+ ++ + G A++L+D M D
Sbjct: 232 SYGRWS---DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQ---DASTWAAMLACYAQNGYAKEGIEMF 306
D T+ ++I G+ + +A+++F+ + D T+ ++ + ++ ++G E+F
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 307 KEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKC 366
+E+ + V I D + + + ++ + L++
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 367 GNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
G ++ A F M+ D+Y Y+ MI + GK D DLF + +G+KPN VT+
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 423 IGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH--YACIVDLLGRAGQLERAYSLIKE 480
+++ S L++E + ++ + + PLP+ Y ++ R G + LI+E
Sbjct: 469 NTMISGLCSKRLLQEA---YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 481 NATS---ADATTWGSLLAACRVH 500
+ DA+T G L A +H
Sbjct: 526 MRSCRFVGDASTIG--LVANMLH 546
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 181/454 (39%), Gaps = 93/454 (20%)
Query: 61 VLNFSSEKSNICYAHKLFDTMP---NCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQS 117
V++F + I AH L M PD +++++ + M +
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF-GELDKVWKLIEVMKRK 310
Query: 118 GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDA 177
G+ P+ + + S++ R+ + E ++ +++ G + +V T L+ + K G + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 178 RDVFDGMDDRD----VVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAG 229
F M RD V+ +TA+I G+ ++ MVEA LF M E +S T+T ++ G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 230 YASCGDMKAAKELYDVMSDK-------------DGV------------------------ 252
Y G MK A +++ M DG+
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 253 --TWVAMIAGYGKLGNVTEARRL---FDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFK 307
T+ +++ G K GN+ EA +L F+ + D T+ ++ Y ++G + E+ K
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 308 EVRQAKIKITEVA---------MVGAISACAQLRDIRMSNALTDH-------IEEGCCDR 351
E+ ++ T V + G + +L + ++ + + +++ C
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 352 TLIVSNA-------------------LINMHSKCGNIDLAWREFSTMRCR----DMYTYS 388
L + A L+ H K N+ AW F M+ + + TYS
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+I F + K +A ++F +M +EGL ++ F
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/464 (20%), Positives = 194/464 (41%), Gaps = 63/464 (13%)
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
M G P ++S+V+N R + + ++ + + G N + +++G+ +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 174 VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASC 233
+ +A + F M + ++ ++ +TT++ G+
Sbjct: 332 LAEAEEAFSEMIRQGILP---------------------------DTVVYTTLIDGFCKR 364
Query: 234 GDMKAAKELYDVMSDKD----GVTWVAMIAGYGKLGNVTEARRLFDGI---PVPQDASTW 286
GD++AA + + M +D +T+ A+I+G+ ++G++ EA +LF + + D+ T+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEE 346
++ Y + G+ K+ + + QA V I + D+ +N L + +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 347 GCCDRTLIVSNALINMHSKCGNIDLAWR---EFSTMRCR-DMYTYSAMITAFAEHGKSQD 402
+ N+++N K GNI+ A + EF D TY+ ++ A+ + G+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
A ++ M +GL+P VTF ++N G++E+G + M I P + +V
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLV 603
Query: 463 DLLGRAGQLERAYSLIKE---NATSADATTWGSLLAACRVHGNVELGETAARHLLE---I 516
L+ A ++ K+ D T+ +L+ G AR++ E +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK----------GHCKARNMKEAWFL 653
Query: 517 DPEDSG--------TYVLLANMYASQDKWVGAEVVKKLMSKKGI 552
E G TY +L + + K++ A V M ++G+
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 35/328 (10%)
Query: 251 GVTWVAMIAGYG-------KLGNVTEARRLFDGIPVP---QDASTWAAMLACYAQNGYAK 300
GV W +A Y +LG + EA L + + D +++ ++ Y + G
Sbjct: 241 GVCW--NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 301 EGIEMFKEVRQAKIKITEV---AMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSN 357
+ ++ + +++ +K +++G + +L + A ++ I +G T +V
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE--AEEAFSEMIRQGILPDT-VVYT 355
Query: 358 ALINMHSKCGNIDLAWREFSTMRCRDM----YTYSAMITAFAEHGKSQDAIDLFFRMPKE 413
LI+ K G+I A + F M RD+ TY+A+I+ F + G +A LF M +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 414 GLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLER 473
GL+P+ VTF ++N +G +++ R M P Y ++D L + G L+
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 474 AYSLIKEN---ATSADATTWGSLLAACRVHGNVE-----LGETAARHLLEIDPEDSGTYV 525
A L+ E + T+ S++ GN+E +GE A L D+ TY
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL----NADTVTYT 530
Query: 526 LLANMYASQDKWVGAEVVKKLMSKKGIK 553
L + Y + A+ + K M KG++
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 181/454 (39%), Gaps = 93/454 (20%)
Query: 61 VLNFSSEKSNICYAHKLFDTMP---NCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQS 117
V++F + I AH L M PD +++++ + M +
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF-GELDKVWKLIEVMKRK 310
Query: 118 GVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDA 177
G+ P+ + + S++ R+ + E ++ +++ G + +V T L+ + K G + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 178 RDVFDGMDDRD----VVAWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAG 229
F M RD V+ +TA+I G+ ++ MVEA LF M E +S T+T ++ G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 230 YASCGDMKAAKELYDVMSDK-------------DGV------------------------ 252
Y G MK A +++ M DG+
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 253 --TWVAMIAGYGKLGNVTEARRL---FDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFK 307
T+ +++ G K GN+ EA +L F+ + D T+ ++ Y ++G + E+ K
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 308 EVRQAKIKITEVA---------MVGAISACAQLRDIRMSNALTDH-------IEEGCCDR 351
E+ ++ T V + G + +L + ++ + + +++ C
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 352 TLIVSNA-------------------LINMHSKCGNIDLAWREFSTMRCR----DMYTYS 388
L + A L+ H K N+ AW F M+ + + TYS
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
+I F + K +A ++F +M +EGL ++ F
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/464 (20%), Positives = 194/464 (41%), Gaps = 63/464 (13%)
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
M G P ++S+V+N R + + ++ + + G N + +++G+ +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 174 VCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASC 233
+ +A + F M + ++ ++ +TT++ G+
Sbjct: 332 LAEAEEAFSEMIRQGILP---------------------------DTVVYTTLIDGFCKR 364
Query: 234 GDMKAAKELYDVMSDKD----GVTWVAMIAGYGKLGNVTEARRLFDGI---PVPQDASTW 286
GD++AA + + M +D +T+ A+I+G+ ++G++ EA +LF + + D+ T+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEE 346
++ Y + G+ K+ + + QA V I + D+ +N L + +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 347 GCCDRTLIVSNALINMHSKCGNIDLAWR---EFSTMRCR-DMYTYSAMITAFAEHGKSQD 402
+ N+++N K GNI+ A + EF D TY+ ++ A+ + G+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
A ++ M +GL+P VTF ++N G++E+G + M I P + +V
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLV 603
Query: 463 DLLGRAGQLERAYSLIKE---NATSADATTWGSLLAACRVHGNVELGETAARHLLE---I 516
L+ A ++ K+ D T+ +L+ G AR++ E +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK----------GHCKARNMKEAWFL 653
Query: 517 DPEDSG--------TYVLLANMYASQDKWVGAEVVKKLMSKKGI 552
E G TY +L + + K++ A V M ++G+
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 35/328 (10%)
Query: 251 GVTWVAMIAGYG-------KLGNVTEARRLFDGIPVP---QDASTWAAMLACYAQNGYAK 300
GV W +A Y +LG + EA L + + D +++ ++ Y + G
Sbjct: 241 GVCW--NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 301 EGIEMFKEVRQAKIKITEV---AMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSN 357
+ ++ + +++ +K +++G + +L + A ++ I +G T +V
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE--AEEAFSEMIRQGILPDT-VVYT 355
Query: 358 ALINMHSKCGNIDLAWREFSTMRCRDM----YTYSAMITAFAEHGKSQDAIDLFFRMPKE 413
LI+ K G+I A + F M RD+ TY+A+I+ F + G +A LF M +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 414 GLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLER 473
GL+P+ VTF ++N +G +++ R M P Y ++D L + G L+
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 474 AYSLIKEN---ATSADATTWGSLLAACRVHGNVE-----LGETAARHLLEIDPEDSGTYV 525
A L+ E + T+ S++ GN+E +GE A L D+ TY
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL----NADTVTYT 530
Query: 526 LLANMYASQDKWVGAEVVKKLMSKKGIK 553
L + Y + A+ + K M KG++
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%)
Query: 357 NALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
+ +I M+S C + D A F+ M R+ T+ MI A++G+ + AID+F R +EG K
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNK 206
Query: 417 PNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYS 476
P++ F V AC S G + EG F+ M + + E Y ++++L G L+ A
Sbjct: 207 PDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 477 LIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEID 517
++ W +L+ C V G +ELG+ A + ++D
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLD 307
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 37/216 (17%)
Query: 233 CGDMKAAKE---LYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAM 289
CG+++A +E ++D ++ D ++ +I Y + +A +F+ +P +++ TW M
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMP-KRNSETWGTM 180
Query: 290 LACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCC 349
+ C A+NG + I+MF + K + AC + DI N H E
Sbjct: 181 IRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDI---NEGLLHFESMYR 237
Query: 350 DRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFR 409
D +++S M Y +I A G +A+D R
Sbjct: 238 DYGMVLS---------------------------MEDYVNVIEMLAACGHLDEALDFVER 270
Query: 410 MPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM 445
M E P+ + ++N C G +E G RF +++
Sbjct: 271 MTVE---PSVEMWETLMNLCWVQGYLELGDRFAELI 303
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 189/446 (42%), Gaps = 42/446 (9%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD +T+LI H ++ RM Q G P+ T+ V+N +
Sbjct: 188 PDTITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMI---C 197
+ ++ + + ++ ++ K V DA ++F M+ + +VV ++++I C
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 198 GYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMS----DK 249
Y + + +A L +M E+ N T+ ++ + G A++LYD M D
Sbjct: 307 SYGRWS---DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLF------DGIPVPQDASTWAAMLACYAQNGYAKEGI 303
D T+ +++ G+ + +A+++F D P D T+ ++ + ++ ++G
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP---DVVTYNTLIKGFCKSKRVEDGT 420
Query: 304 EMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMH 363
E+F+E+ + V I D + + + ++ + L++
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 364 SKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
G ++ A F M+ D+Y Y+ MI + GK D DLF + +G+KPN
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 420 VTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH--YACIVDLLGRAGQLERAYSL 477
VT+ +++ S L++E + ++ + + PLP Y ++ R G + L
Sbjct: 541 VTYNTMISGLCSKRLLQEA---YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Query: 478 IKENATS---ADATTWGSLLAACRVH 500
I+E + DA+T G L A +H
Sbjct: 598 IREMRSCRFVGDASTIG--LVANMLH 621
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 151/344 (43%), Gaps = 21/344 (6%)
Query: 108 ISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGM 167
+ Y M ++GV P+ + S++N + E Q + + G N IV T+L+
Sbjct: 605 VDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKA 664
Query: 168 YAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGERNS--- 220
Y+K GC+ +AR V+D M D DV A +M+ A + ++ EA +F+ + E+ +
Sbjct: 665 YSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDV 724
Query: 221 FTWTTMVAGYASCGDMKAAKELYDVMSD----KDGVTWVAMIAGYGKLGNVTEARRLFDG 276
++ TM+ Y G + A E+ + M + D ++ ++A Y G ++E LF
Sbjct: 725 ISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHE 784
Query: 277 IPVPQ----DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
+ V + D T+ + + G E + + + A+ + + L
Sbjct: 785 MLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLY 844
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYS 388
+ + + G R NA+I +S G+ID+A + + M+ + D+ T +
Sbjct: 845 AYALESC--QELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQA 902
Query: 389 AMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSS 432
++ + + G + + R+ L+P+Q F V +A S+
Sbjct: 903 YLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSA 946
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 187/452 (41%), Gaps = 70/452 (15%)
Query: 164 LLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGER- 218
L+ +Y K+G + DA ++F M D V + MI + EA L M E+
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG 370
Query: 219 ---NSFTWTTMVAGYASCGDMKAAKELYDVMSD----KDGVTWVA---------MIAG-- 260
++ T+ +++ +A GD++AA E Y + D VT A M+A
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVE 430
Query: 261 ------------------------YGKLGNVTEARRLFDGIPVP--QDASTWAAMLACYA 294
Y G V +A+ LF+ + ++T AA++ YA
Sbjct: 431 AVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYA 490
Query: 295 QNGYAKEGIEMFKEVRQAKIKITEV----AMVGAISACAQLRDIRMSNALTDHIEEGCCD 350
+ G E +F R + +V M+ A A+L + +S L ++
Sbjct: 491 EKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGK-AKLHEKALS--LFKGMKNQGTW 547
Query: 351 RTLIVSNALINMHSKCGNIDLAWREFSTMR---CRD-MYTYSAMITAFAEHGKSQDAIDL 406
N+L M + +D A R + M C+ TY+AMI ++ G DA+DL
Sbjct: 548 PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDL 607
Query: 407 FFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLL- 465
+ M K G+KPN+V + ++N + SG+VEE ++F++M + + ++ + L+
Sbjct: 608 YEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM----EEHGVQSNHIVLTSLIK 663
Query: 466 --GRAGQLE---RAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPED 520
+ G LE R Y +K++ D S+L+ C G V E+ L E D
Sbjct: 664 AYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCD 723
Query: 521 SGTYVLLANMYASQDKWVGAEVVKKLMSKKGI 552
++ + +Y A V + M + G+
Sbjct: 724 VISFATMMYLYKGMGMLDEAIEVAEEMRESGL 755
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 165/386 (42%), Gaps = 27/386 (6%)
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
M + G+ P+ +SS++ + G+ +VE ++ ++++SG ++I ++ YA++G
Sbjct: 573 MEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGR 632
Query: 174 VCDARDVFDGMDDRDV----VAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTT 225
+ +A ++ + + + +T +I G+ K+ MM + D M E N +T
Sbjct: 633 IDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTA 692
Query: 226 MVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEAR---------R 272
++ + GD K + L+ +M + D + ++ +++G + + R +
Sbjct: 693 LIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEK 752
Query: 273 LFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
L + + + + L Y +A E I K+ + + + G CA R
Sbjct: 753 LLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITG---YCAAGR 809
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR-DMYTYSAMI 391
N L +EG L+ L+ H + G+I+ A F C D YS ++
Sbjct: 810 LDEAYNHLESMQKEGIVP-NLVTYTILMKSHIEAGDIESAIDLFEGTNCEPDQVMYSTLL 868
Query: 392 TAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDI 451
+ + DA+ L M K G+ PN+ ++ +L S L E + + M + DI
Sbjct: 869 KGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAAL-DI 927
Query: 452 EPLPEHYACIVDLLGRAGQLERAYSL 477
P ++ ++ +L +L A +L
Sbjct: 928 WPRSINHTWLIYILCEEKKLREARAL 953
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 171/428 (39%), Gaps = 44/428 (10%)
Query: 163 ALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGER 218
+L + K GC +A +FD M+ D V +T ++ Y K M A L+ M ER
Sbjct: 242 SLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVER 301
Query: 219 ----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEA 270
+ + T++ G+ G + + ++ M K + T+ MI Y K GNV A
Sbjct: 302 SFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA 361
Query: 271 RRLFDGIPVPQDAS----TWAAMLACYAQNGYAKEGIEMFKEVRQAKI---KITEVAMVG 323
RLF +D S + ++ + + G + +++ + I IT ++
Sbjct: 362 LRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLK 421
Query: 324 AISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRD 383
+ C +L+ + L ++ GC ++ + GNI++ R
Sbjct: 422 MLPKCHELKYAMV--ILQSILDNGCGINPPVIDDL--------GNIEVKVESLLGEIARK 471
Query: 384 MYTYSA-----MITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEG 438
+A + TA A+ +M G P ++ V+ ++E+
Sbjct: 472 DANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDL 531
Query: 439 CRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLI---KENATSADATTWGSLLA 495
I+ + D P + Y +V+ L + + A+++I +E + S++
Sbjct: 532 ASLVNIIQEL-DFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIG 590
Query: 496 ACRVHGNVELGETAARHLLE--IDPEDSGTYVLLANMYASQDKWVGA-EVVKKLMSKKGI 552
+ G V E +LE I P D Y+++ N YA + A E+V++++ K
Sbjct: 591 SLGKQGRVVEAEETFAKMLESGIQP-DEIAYMIMINTYARNGRIDEANELVEEVV--KHF 647
Query: 553 KKPSGYSW 560
+PS +++
Sbjct: 648 LRPSSFTY 655
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/514 (21%), Positives = 203/514 (39%), Gaps = 65/514 (12%)
Query: 74 AHKLFDTMPN---CPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVL 130
A LF+ M P + ++ F +R + M G+ FT S+VL
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 131 NACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVV 190
+AC R + E K+ L G+ + ALL ++ K+G +A V M++
Sbjct: 289 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 191 AWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK- 249
A +S T+ +VA Y G K A + ++M+ K
Sbjct: 349 A---------------------------DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 250 ---DGVTWVAMIAGYGKLGNVTEARRLFDGIP----VPQDASTWAAMLACYAQNGYAKEG 302
+ +T+ +I YGK G EA +LF + VP + T+ A+L+ + + E
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP-NTCTYNAVLSLLGKKSRSNEM 440
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
I+M +++ ++ C + N + ++ + N LI+
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 363 HSKCGNIDLAWREFSTMR------CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLK 416
+ +CG+ A + + M C + TY+A++ A A G + ++ M +G K
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNAC--VTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 417 PNQVTFIGVLNACSSSG------LVEEGCRFFQIMTGVFDIEP-LPEHYACIVDLLGRAG 469
P + ++ +L + G +E + QI + L ++ C AG
Sbjct: 559 PTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC----RALAG 614
Query: 470 QLERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLE--IDPEDSGTYVLL 527
ERA++L K++ D + S+L+ + + E + E + P D TY L
Sbjct: 615 S-ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP-DLVTYNSL 672
Query: 528 ANMYASQDK-WVGAEVVKKLMSKKGIKKPSGYSW 560
+MY + + W E++K L +K KP S+
Sbjct: 673 MDMYVRRGECWKAEEILKTL--EKSQLKPDLVSY 704
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 21/319 (6%)
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLFDGI----PVPQDASTWAAMLACYAQNGYA-KEGIE 304
D + ++ Y + G +A LF+ + P P T+ +L + + G + ++ +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPT-LVTYNVILDVFGKMGRSWRKILG 267
Query: 305 MFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHS 364
+ E+R +K E +SACA+ +R + ++ + + NAL+ +
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 365 KCGNIDLAW---REFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQV 420
K G A +E C D TY+ ++ A+ G S++A + M K+G+ PN +
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 421 TFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLG---RAGQLERAYSL 477
T+ V++A +G +E + F M + P Y ++ LLG R+ ++ +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCV-PNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 478 IKENATSADATTWGSLLAACRVHGNVELGETAARHLLEID----PEDSGTYVLLANMYAS 533
+K N S + TW ++LA C GN + + R E+ D T+ L + Y
Sbjct: 447 MKSNGCSPNRATWNTMLALC---GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 534 QDKWVGAEVVKKLMSKKGI 552
V A + M++ G
Sbjct: 504 CGSEVDASKMYGEMTRAGF 522
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 167/425 (39%), Gaps = 94/425 (22%)
Query: 188 DVVAWTAMICGYAKVAMMVEARWLFDNMGER----------------------------- 218
DV A+T ++ Y++ +A LF+ M E
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 219 -----------NSFTWTTMVAGYASCGDMKAAKELYDVMS----DKDGVTWVAMIAGYGK 263
+ FT +T+++ A G ++ AKE + + + VT+ A++ +GK
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 264 LGNVTEARRLFDGI---PVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVA 320
G TEA + + P D+ T+ ++A Y + G++KE + + + + +
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV------ 382
Query: 321 MVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMR 380
M NA+T +I+ + K G D A + F +M+
Sbjct: 383 ---------------MPNAIT--------------YTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 381 ----CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVE 436
+ TY+A+++ + +S + I + M G PN+ T+ +L C + G+ +
Sbjct: 414 EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDK 473
Query: 437 EGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQ---LERAYSLIKENATSADATTWGSL 493
R F+ M EP + + ++ GR G + Y + +A TT+ +L
Sbjct: 474 FVNRVFREMKSC-GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNAL 532
Query: 494 LAACRVHGNVELGETAARHLLE--IDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKG 551
L A G+ GE + P ++ +Y L+ YA ++G E ++ + K+G
Sbjct: 533 LNALARKGDWRSGENVISDMKSKGFKPTET-SYSLMLQCYAKGGNYLGIERIENRI-KEG 590
Query: 552 IKKPS 556
PS
Sbjct: 591 QIFPS 595
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 169/391 (43%), Gaps = 35/391 (8%)
Query: 83 NCP-DAFIWTSLIRAFLSHRAHF-RHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMV 140
+CP D+ + L+ A++ RA F + M + GV+P+ T+++V++A G+
Sbjct: 346 SCPADSVTYNELVAAYV--RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 141 EGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG-------CVCDARDVFDGMDDRDVVAWT 193
E ++ + ++G N A+L + K +CD + +G + W
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS--NGCSP-NRATWN 460
Query: 194 AMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK 249
M+ M +F M E + T+ T+++ Y CG A ++Y M+ +
Sbjct: 461 TMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMT-R 519
Query: 250 DG-----VTWVAMIAGYGKLGNVTEARRLFDGIPV----PQDASTWAAMLACYAQNGYAK 300
G T+ A++ + G+ + + P + S ++ ML CYA+ G
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS-YSLMLQCYAKGGNYL 578
Query: 301 EGIEMFK-EVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNAL 359
GIE + +++ +I + + + + A + R + S ++ +++ N++
Sbjct: 579 -GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSM 637
Query: 360 INMHSKCGNIDLAWREFSTMR----CRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGL 415
+++ ++ D A ++R D+ TY++++ + G+ A ++ + K L
Sbjct: 638 LSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQL 697
Query: 416 KPNQVTFIGVLNACSSSGLVEEGCRFFQIMT 446
KP+ V++ V+ GL++E R MT
Sbjct: 698 KPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 166/425 (39%), Gaps = 35/425 (8%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P+A +T++I A+ + + M ++G +P+ T+++VL+ G+ E +
Sbjct: 384 PNAITYTTVIDAY-GKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMD------DRDVVAWTAMICG 198
+ + +G N+ +L + G VF M DRD + +I
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT--FNTLISA 500
Query: 199 YAKVAMMVEARWLFDNMGERNSF-----TWTTMVAGYASCGDMKAAKELYDVMSDK---- 249
Y + V+A ++ M R F T+ ++ A GD ++ + + M K
Sbjct: 501 YGRCGSEVDASKMYGEM-TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWA-------AMLACYAQNGYAKEG 302
++ M+ Y K GN R+ + I Q +W A C A G ++
Sbjct: 560 TETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAG-SERA 618
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+FK + K V +S + + + + I E L+ N+L++M
Sbjct: 619 FTLFK---KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 363 HSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
+ + G A T+ D+ +Y+ +I F G Q+A+ + M + G++P
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPC 735
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLI 478
T+ ++ ++ G+ E + M D P + +VD RAG+ A +
Sbjct: 736 IFTYNTFVSGYTAMGMFAEIEDVIECMAKN-DCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Query: 479 KENAT 483
+ T
Sbjct: 795 SKIKT 799
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/438 (18%), Positives = 184/438 (42%), Gaps = 46/438 (10%)
Query: 60 RVLNFSSEKSNICYAHKLFDTM---PNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQ 116
+++N E+ AH +F+T+ + P +T+L+ A L+ + HF +S +++ +
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTA-LTRQKHFHSLLSLISKVEK 382
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
+G+ P F++++NA + + ++ ++ +SG L+ Y K G + +
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 177 ARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDM 236
+ + D M L D M + N T +V + + +
Sbjct: 443 SSRLLDMM--------------------------LRDEMLQPNDRTCNILVQAWCNQRKI 476
Query: 237 KAAKEL-YDVMS---DKDGVTWVAMIAGYGKLGNVTEARRLFDGIP------VPQDASTW 286
+ A + Y + S D VT+ + Y ++G+ A + IP V + T
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTC 534
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEE 346
++ Y + G +E + F +++ + I + D+ + D +EE
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 347 GCCDRTLIVSNALINMHSKCGNIDLAWREFSTMR----CRDMYTYSAMITAFAEHGKSQD 402
++ + L+N S G++ ++ M D++ +S + +A G+ +
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Query: 403 AIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIV 462
A + +M K G++PN V + +++ S+G +++ + ++ M G+ + P Y ++
Sbjct: 655 AEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Query: 463 DLLGRAGQLERAYSLIKE 480
G A Q +A L+K+
Sbjct: 715 WGFGEAKQPWKAEELLKD 732
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 27/242 (11%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD + ++ LI L + I + ++G+LP +T+S +++ C + EG++
Sbjct: 573 PDNYTYSILICG-LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDV----VAWTAMICGYA 200
++ N +V L+ Y +SG + A ++ + M + + +T++I G +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 201 KVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGV 252
++ + EA+ LF+ M E N F +T ++ GY G M + L M K + +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 253 TWVAMIAGYGKLGNVTEARRLFD-----GIPVPQDASTWAAMLACYAQNGYAKEG--IEM 305
T+ MI GY + GNVTEA RL + GI VP D+ T+ + GY K+G +E
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGI-VP-DSITYKEFIY-----GYLKQGGVLEA 804
Query: 306 FK 307
FK
Sbjct: 805 FK 806
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/502 (20%), Positives = 208/502 (41%), Gaps = 47/502 (9%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD +++T+ I AF + +++M ++GV P+ TF++V++ G E
Sbjct: 258 PDVYLFTTAINAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
++V+ G I + L+ ++ + DA V M + +V+ + +I +
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 201 KVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAA----KELYDVMSDKDGV 252
+ + +A + D M + S T+ T++ GY G A KE+ + + +
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACY----AQNGYAKEGIEMFKE 308
++ ++I A R F G + ++ S +L ++G + +E++ +
Sbjct: 437 SFTSVICLLCSHLMFDSALR-FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 309 VRQAKIKI---TEVAMVGAISACAQLRD-IRMSNALTDHIEEGCC-DRTLIVSNALINMH 363
+ T A++ + +L + R+ + + GC DR + N LI+
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI---LGRGCVMDR--VSYNTLISGC 550
Query: 364 SKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
+D A+ M R D YTYS +I K ++AI + + G+ P+
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 420 VTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL-- 477
T+ +++ C + EEG FF M +++P Y ++ R+G+L A L
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 478 -IKENATSADATTWGSLLAACRVHGNVELGETAARHLLE------IDPEDSGTYVLLANM 530
+K S ++ T+ SL+ + VE A+ L E ++P + Y L +
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVE----EAKLLFEEMRMEGLEP-NVFHYTALIDG 724
Query: 531 YASQDKWVGAEVVKKLMSKKGI 552
Y + V E + + M K +
Sbjct: 725 YGKLGQMVKVECLLREMHSKNV 746
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 142/352 (40%), Gaps = 20/352 (5%)
Query: 90 WTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRL 149
+TS+I SH F + M + P G +++++ + + ++ +
Sbjct: 438 FTSVICLLCSH-LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 150 VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYAKVAMM 205
+ GF + ALL ++G + +A + + R D V++ +I G +
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 206 VEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAM 257
EA D M +R +++T++ ++ G + ++ A + +D D T+ M
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 258 IAGYGKLGNVTEARRLFDGI---PVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
I G K E + FD + V + + ++ Y ++G +E+ ++++ I
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 315 KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGN---IDL 371
I + + + + L + + + + ALI+ + K G ++
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 372 AWREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
RE + + TY+ MI +A G +A L M ++G+ P+ +T+
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 27/242 (11%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD + ++ LI L + I + ++G+LP +T+S +++ C + EG++
Sbjct: 573 PDNYTYSILICG-LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDV----VAWTAMICGYA 200
++ N +V L+ Y +SG + A ++ + M + + +T++I G +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 201 KVAMMVEARWLFDNMG----ERNSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGV 252
++ + EA+ LF+ M E N F +T ++ GY G M + L M K + +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 253 TWVAMIAGYGKLGNVTEARRLFD-----GIPVPQDASTWAAMLACYAQNGYAKEG--IEM 305
T+ MI GY + GNVTEA RL + GI VP D+ T+ + GY K+G +E
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGI-VP-DSITYKEFIY-----GYLKQGGVLEA 804
Query: 306 FK 307
FK
Sbjct: 805 FK 806
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/502 (20%), Positives = 208/502 (41%), Gaps = 47/502 (9%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD +++T+ I AF + +++M ++GV P+ TF++V++ G E
Sbjct: 258 PDVYLFTTAINAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
++V+ G I + L+ ++ + DA V M + +V+ + +I +
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 201 KVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAA----KELYDVMSDKDGV 252
+ + +A + D M + S T+ T++ GY G A KE+ + + +
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACY----AQNGYAKEGIEMFKE 308
++ ++I A R F G + ++ S +L ++G + +E++ +
Sbjct: 437 SFTSVICLLCSHLMFDSALR-FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 309 VRQAKIKI---TEVAMVGAISACAQLRD-IRMSNALTDHIEEGCC-DRTLIVSNALINMH 363
+ T A++ + +L + R+ + + GC DR + N LI+
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI---LGRGCVMDR--VSYNTLISGC 550
Query: 364 SKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
+D A+ M R D YTYS +I K ++AI + + G+ P+
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 420 VTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL-- 477
T+ +++ C + EEG FF M +++P Y ++ R+G+L A L
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 478 -IKENATSADATTWGSLLAACRVHGNVELGETAARHLLE------IDPEDSGTYVLLANM 530
+K S ++ T+ SL+ + VE A+ L E ++P + Y L +
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVE----EAKLLFEEMRMEGLEP-NVFHYTALIDG 724
Query: 531 YASQDKWVGAEVVKKLMSKKGI 552
Y + V E + + M K +
Sbjct: 725 YGKLGQMVKVECLLREMHSKNV 746
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 142/352 (40%), Gaps = 20/352 (5%)
Query: 90 WTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRL 149
+TS+I SH F + M + P G +++++ + + ++ +
Sbjct: 438 FTSVICLLCSH-LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 150 VQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYAKVAMM 205
+ GF + ALL ++G + +A + + R D V++ +I G +
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 206 VEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAM 257
EA D M +R +++T++ ++ G + ++ A + +D D T+ M
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 258 IAGYGKLGNVTEARRLFDGI---PVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKI 314
I G K E + FD + V + + ++ Y ++G +E+ ++++ I
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 315 KITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGN---IDL 371
I + + + + L + + + + ALI+ + K G ++
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 372 AWREFSTMRCR-DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF 422
RE + + TY+ MI +A G +A L M ++G+ P+ +T+
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 188/467 (40%), Gaps = 61/467 (13%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD +++L+ F ++ RM + P T S+++N + E
Sbjct: 138 PDTITFSTLVNGF-CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRD----VVAWTAMICGYA 200
+ R+V+ GF +++ +L KSG A D+F M++R+ VV ++ +I
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 201 KVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAG 260
K +A LF+ M +MK K D VT+ ++I G
Sbjct: 257 KDGSFDDALSLFNEM-------------------EMKGIK--------ADVVTYSSLIGG 289
Query: 261 Y---GKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKIT 317
GK + + R G + D T++A++ + + G E E++ E+ I
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 318 EVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFS 377
+ I + + +N + D + C+ ++ + LIN + K +D R F
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 378 TMRCRDMY----TYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSG 433
+ + + TY+ ++ F + GK A +LF M G+ P+ VT+ +L+ +G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 434 LVEEGCRFFQIM--------TGVFDIEPLPEHYACIVDLLGRAGQLERAYSL---IKENA 482
+ + F+ M G+++I I+ + A +++ A+SL + +
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNI---------IIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 483 TSADATTWGSLLAACRVHGNVELGETAARHLLE--IDPEDSGTYVLL 527
D T+ ++ G++ + R + E P+D +L+
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 174/434 (40%), Gaps = 63/434 (14%)
Query: 90 WTSLIRAFLSHRAHFRH---------CISTYARMHQSGVLPSGFTFSSVLNACGR----- 135
++S+ A LS++ R+ I + M QS LP+ F+ + +A R
Sbjct: 28 YSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYD 87
Query: 136 -VPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTA 194
V +G +++G ++ + M C C + + V A
Sbjct: 88 LVLGFCKGMELNG------------IEHDMYTMTIMINCYCRKKKLLFAFS----VLGRA 131
Query: 195 MICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSD----KD 250
GY E ++ T++T+V G+ G + A L D M + D
Sbjct: 132 WKLGY-----------------EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 251 GVTWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFK 307
VT +I G G V+EA L D + D T+ +L ++G + +++F+
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 308 EVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCG 367
++ + IK + V I + + + +L + +E ++ ++LI G
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 368 NIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFI 423
D + M R D+ T+SA+I F + GK +A +L+ M G+ P+ +T+
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 354
Query: 424 GVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKENAT 483
+++ + E + F +M EP Y+ +++ +A +++ L +E ++
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 484 SA---DATTWGSLL 494
+ T+ +L+
Sbjct: 414 KGLIPNTITYNTLV 427
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 145/354 (40%), Gaps = 19/354 (5%)
Query: 109 STYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMY 168
S ++ + G P+ TFS+++N + E ++ R+V+ G + I L+
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 203
Query: 169 AKSGCVCDARDVFDGMDD----RDVVAWTAMICGYAKVAMMVEARWLFDNMGERN----S 220
SG +A + D M + + V + ++ K A L M ERN +
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 221 FTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDG 276
++ ++ G G + A L++ M K + +T+ +I G+ G + +L
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 277 I---PVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRD 333
+ + + T++ ++ + + G +E E+ KE+ I + I +
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 334 IRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSA 389
+ +N + D + CD + N LIN + K ID F M R D TY+
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 390 MITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQ 443
+I F E GK A +LF M + PN VT+ +L+ +G E+ F+
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/352 (17%), Positives = 148/352 (42%), Gaps = 19/352 (5%)
Query: 113 RMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSG 172
+M + G P+ T+ VLN + ++ ++ + + + + ++ K G
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 173 CVCDARDVFDGMDDR----DVVAWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWT 224
+ +A ++F+ M+ + +++ + +I G+ + L +M +R N T++
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 225 TMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARRLFDGIP-- 278
++ + G ++ A+EL+ M + D +T+ ++I G+ K ++ +A ++ D +
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 279 -VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMS 337
+ T+ ++ Y + +G+E+F+++ + V I +L + ++
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 338 NALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITA 393
L + ++ L++ G + A F + D+ Y+ +I
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 394 FAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM 445
K DA DLF +P +G+KP T+ ++ G + E F+ M
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 146/355 (41%), Gaps = 27/355 (7%)
Query: 217 ERNSFTWTTMVAGYASCGDMKAAKELYDVMSD----KDGVTWVAMIAGYGKLGNVTEARR 272
E N+ T++T++ G G + A EL D M + D +T ++ G G EA
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 273 LFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACA 329
L D + +A T+ +L ++G +E+ +++ + IK+ V I
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 330 QLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMY 385
+ + + L + +E +I N LI G D + M R ++
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 386 TYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIM 445
T+S +I +F + GK ++A +L M G+ P+ +T+ +++ +++ + +M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 446 TGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE---NATSADATTWGSLLAACRVHGN 502
+P + +++ +A +++ L ++ AD T+ +L + G
Sbjct: 395 VSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL-----IQGF 448
Query: 503 VELGE-TAARHLLE------IDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKK 550
ELG+ A+ L + + P +LL + + + E+ +K+ K
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/364 (18%), Positives = 136/364 (37%), Gaps = 102/364 (28%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P+ ++ LI +F+ R + M G+ P T++S+++ + + + Q
Sbjct: 331 PNVVTFSVLIDSFVKE-GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAM 204
+ +V G N L+ Y K+ + D ++F M R VVA
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA------------- 436
Query: 205 MVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKL 264
++ T+ T++ G+ G + AKEL+ M +
Sbjct: 437 --------------DTVTYNTLIQGFCELGKLNVAKELFQEMVSR--------------- 467
Query: 265 GNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGA 324
VP + T+ +L NG +++ +E+F+++ ++K+++
Sbjct: 468 -------------KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL-------- 506
Query: 325 ISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR-- 382
DI + N + G C+ + +D AW F ++ +
Sbjct: 507 --------DIGIYNIII----HGMCNAS---------------KVDDAWDLFCSLPLKGV 539
Query: 383 --DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTF-------IGVLNACSSSG 433
+ TY+ MI + G +A LF +M ++G P+ T+ +G +A S
Sbjct: 540 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 434 LVEE 437
L+EE
Sbjct: 600 LIEE 603
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 152/371 (40%), Gaps = 43/371 (11%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
PD I+ +L+ L + RM + G P+ T ++++N + +
Sbjct: 156 PDTVIFNTLLNG-LCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDARDVFDGMDDR----DVVAWTAMICGYA 200
+ R+V++GF N++ +L + KSG A ++ M++R D V ++ +I G
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 201 KVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDM-KAAKELYDVMSDKDGVTWV 255
K + A LF+ M + + T+ T++ G+ + G AK L D++ K
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK------ 328
Query: 256 AMIAGYGKLGNVTEARRLFDGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
+ + T++ ++ + + G +E ++ KE+ Q I
Sbjct: 329 -----------------------ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 316 ITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWRE 375
+ I + + + + D + CD ++ N LIN + K ID
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 376 FSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSS 431
F M R + TY+ ++ F + GK + A LF M ++P+ V++ +L+
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 432 SGLVEEGCRFF 442
+G +E+ F
Sbjct: 486 NGELEKALEIF 496
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
Query: 384 MYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQ 443
+ T + ++ +GK DA+ L RM + G +PN+VT+ VLN SG +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 444 IMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE---NATSADATTWGSLLAACRVH 500
M +I+ Y+ I+D L + G L+ A++L E AD T+ +L+
Sbjct: 253 KMEER-NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 501 GNVELGETAARHLL--EIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGI 552
G + G R ++ +I P + T+ +L + + + K A+ + K M ++GI
Sbjct: 312 GRWDDGAKLLRDMIKRKISP-NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/366 (19%), Positives = 148/366 (40%), Gaps = 28/366 (7%)
Query: 210 WLFDNMG-------ERNSFTWTTMVAGYASCGDMKAAKELYDVMSD----KDGVTWVAMI 258
+ F MG E ++ + T++ G + A EL D M + +T ++
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV 200
Query: 259 AGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIK 315
G G V++A L D + + T+ +L ++G +E+ +++ + IK
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 316 ITEVAMVGAISACAQLRDIRMSNA--LTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAW 373
+ V I +D + NA L + +E +I N LI G D
Sbjct: 261 LDAVKYSIIIDGLC--KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 374 REFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNAC 429
+ M R ++ T+S +I +F + GK ++A L M + G+ PN +T+ +++
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 430 SSSGLVEEGCRFFQIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSLIKE---NATSAD 486
+EE + +M +P + +++ +A +++ L +E A+
Sbjct: 379 CKENRLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 487 ATTWGSLLAACRVHGNVELGETAARHLL--EIDPEDSGTYVLLANMYASQDKWVGAEVVK 544
T+ +L+ G +E+ + + ++ + P+ +LL + + + E+
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 545 KLMSKK 550
K+ K
Sbjct: 498 KIEKSK 503
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 164/387 (42%), Gaps = 22/387 (5%)
Query: 114 MHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGC 173
M + G+ + ++++ V +G V RL + GF + L+ +Y K G
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 499
Query: 174 VCDARDVFDGMDDRDVV----AWTAMICGYAKVAMMVEARWLFDNMGER----NSFTWTT 225
+ A +V M + V ++ MI G+ K+ A +F++M + + +
Sbjct: 500 ISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 226 MVAGYASCGDMKAA----KELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIP--- 278
+++ + G+M A KE+ + T++ +I GY K G++ + +FD +
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Query: 279 -VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMS 337
VP T+ ++ + ++ +E+ E+ A + E + A + D +
Sbjct: 620 CVPT-VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 338 NALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDM----YTYSAMITA 393
++ D + AL+ K G + A M R++ + Y+ +I
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 738
Query: 394 FAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEP 453
+A G +A DL +M KEG+KP+ T+ ++ACS +G + + + M + ++P
Sbjct: 739 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL-GVKP 797
Query: 454 LPEHYACIVDLLGRAGQLERAYSLIKE 480
+ Y ++ RA E+A S +E
Sbjct: 798 NIKTYTTLIKGWARASLPEKALSCYEE 824
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 164/382 (42%), Gaps = 21/382 (5%)
Query: 111 YARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAK 170
+ R+ + G P+ T+ ++N +V + + +V + + G N + ++ + K
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 171 SGCVCDARDVFDGMDDR----DVVAWTAMI---CGYAKVAMMVEARWLFDNMGER-NSFT 222
+A VF+ M DV+ + +I CG + ++ + R + T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 223 WTTMVAGYASCGDMKAAKELYDVMSDKDGV----TWVAMIAGYGKLGNVTEARRLFDGIP 278
+ ++ GYA GDM+ + E++D+M V T+ +I G + + +A + D +
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 279 ---VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIR 335
V + T+ ++ YA G + E F ++ + + + AC + ++
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 336 MSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMI 391
+ A+T + R V N LI+ ++ G++ A M+ D++TY++ I
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 392 TAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDI 451
+A ++ G A M G+KPN T+ ++ + + L E+ ++ M + I
Sbjct: 772 SACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAM-GI 830
Query: 452 EPLPEHYACIV-DLLGRAGQLE 472
+P Y C++ LL RA E
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAE 852
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 167/409 (40%), Gaps = 56/409 (13%)
Query: 85 PDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQ 144
P SL+ F F+ +S M G +P+ +++V+N + + +
Sbjct: 147 PSIVTLGSLLNGF-CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 145 VHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDA----RDVFDGMDDRDVVAWTAMICGYA 200
V + + G + + L+ + SG DA RD+ D +V+ +TA+I +
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 201 KVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGV 252
K ++EAR L+ M R N FT+ +++ G+ G + AK ++D+M K D V
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 253 TWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMFKEV 309
T+ +I G+ K V + +LF + + DA T+ ++ Y Q G ++F
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR- 384
Query: 310 RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNI 369
+ C DI N L D C + AL+ +
Sbjct: 385 ---------------MVDCGVSPDIVTYNILLD-----CLCNNGKIEKALVMVE------ 418
Query: 370 DLAWREFSTMRCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNAC 429
DL E D+ TY+ +I K ++A LF + ++G+KP+ + +I +++
Sbjct: 419 DLQKSEMDV----DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 430 SSSGLVEEG---CRF-----FQIMTGVFDIEPLPEHYACIVDLLGRAGQ 470
GL E CR F ++D E L +HY + L +A
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERIYD-ETLRDHYTSLSAELIKAAH 522
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 112/528 (21%), Positives = 199/528 (37%), Gaps = 98/528 (18%)
Query: 64 FSSEKSNICYAHKLFDTMPNCPDAFIWTSLIRAF--LSHRAHFR-------HCI------ 108
FSS H L N P+ TSL R+F SH H+R HCI
Sbjct: 9 FSSSVKGFVRRHYLLLERGNNPE----TSLSRSFSGASHHHHYRERLRNELHCIKFDDAF 64
Query: 109 STYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMY 168
S + M QS +PS F+ VL ++ ++ ++ G + T L+ +
Sbjct: 65 SLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCF 124
Query: 169 AKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGERNSF-TWTTMV 227
+ C +A+ + + + +G R S T +++
Sbjct: 125 CR--------------------------CSRLSLALALLGKMM--KLGFRPSIVTLGSLL 156
Query: 228 AGYASCGDMKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQDASTWA 287
G+ + A L D M G+G + NV + +G+ +D +
Sbjct: 157 NGFCQGNRFQEAVSLVDSMD------------GFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 288 AMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEG 347
+ C + G + + T ++ +S + D + L D ++
Sbjct: 205 EVFYCMEKKGIRADAV-------------TYNTLISGLSNSGRWTD--AARLLRDMVKRK 249
Query: 348 CCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDA 403
D +I ALI+ K GN+ A + M R +++TY+++I F HG DA
Sbjct: 250 I-DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308
Query: 404 IDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMT------GVFDIEPLPEH 457
+F M +G P+ VT+ ++ S VE+G + F MT F L
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 458 YACIVDLLGRAGQL---ERAYSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLL 514
Y +AG+L ++ ++ + + S D T+ LL +G +E L
Sbjct: 369 YC-------QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 515 EIDPE-DSGTYVLLANMYASQDKWVGAEVVKKLMSKKGIKKPSGYSWI 561
+ + + D TY ++ DK A + + +++KG+ KP ++I
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV-KPDAIAYI 468
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 176/417 (42%), Gaps = 65/417 (15%)
Query: 60 RVLNFSSEKSNICYAHKLFDTMPNCP---DAFIWTSLIRAFLSHRAHFRHCISTYARMHQ 116
+VL+ ++ N LF M C D + + +I L + F +S +M +
Sbjct: 74 KVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC-LCRCSRFVIALSVVGKMMK 132
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
G P T SS++N + + + + ++ + GF + ++ ++ K G V D
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 177 ARDVFDGMDD------------------------------RD---------VVAWTAMIC 197
A ++FD M+ RD V+ +TA+I
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 198 GYAKVAMMVEARWLFDNMGER----NSFTWTTMVAGYASCGDMKAAKELYDVMSDK---- 249
+ K EA L++ M R + FT+ +++ G G + AK++ D+M K
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 250 DGVTWVAMIAGYGKLGNVTEARRLFDGIP---VPQDASTWAAMLACYAQNGYAKEGIEMF 306
D VT+ +I G+ K V E +LF + + D T+ ++ Y Q G E+F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 307 KEV-RQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSK 365
+ + I+ + + G C R + + L +++++ + + N +I+ K
Sbjct: 373 SRMDSRPNIRTYSILLYG---LCMNWR-VEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 366 CGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFR-MPKEGLKP 417
GN++ AW F ++ C+ D+ +Y+ MI+ F + D DL +R M ++GL P
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK-RQWDKSDLLYRKMQEDGLLP 484
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/476 (19%), Positives = 191/476 (40%), Gaps = 93/476 (19%)
Query: 98 LSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGN 157
++ ++ IS + M G+ ++++ V+N R V V G++++ G+ +
Sbjct: 79 IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138
Query: 158 KIVQTALLGMYAKSGCVCDARDVFDGMDDRDVVAWTAMICGYAKVAMMVEARWLFDNMGE 217
+ ++L+ + + V DA D+ M++ MG
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEE----------------------------MGF 170
Query: 218 R-NSFTWTTMVAGYASCGDMKAAKELYDVMSDK----DGVTWVAMIAGYGKLGNVTEARR 272
R + + T++ G G + A EL+D M D VT+ +++AG G ++A R
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 273 LF------DGIPVPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAIS 326
L D +P + T+ A++ + + G E +++++E+ +
Sbjct: 231 LMRDMVMRDIVP---NVITFTAVIDVFVKEGKFSEAMKLYEEMTRR-------------- 273
Query: 327 ACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR---- 382
C D + N+LIN G +D A + M +
Sbjct: 274 ---------------------CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 383 DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFF 442
D+ TY+ +I F + + + LF M + GL + +T+ ++ +G + F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 443 QIMTGVFDIEPLPEHYACIVDLLGRAGQLERAYSL---IKENATSADATTWGSLL-AACR 498
M D P Y+ ++ L ++E+A L ++++ D TT+ ++ C+
Sbjct: 373 SRM----DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 499 VHGNVELGETAARHL--LEIDPEDSGTYVLLANMYASQDKWVGAEVVKKLMSKKGI 552
+ GNVE R L + P D +Y + + + + +W ++++ + M + G+
Sbjct: 429 I-GNVEDAWDLFRSLSCKGLKP-DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 158/402 (39%), Gaps = 58/402 (14%)
Query: 117 SGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCD 176
+G+ T S+++A +E + + L QSG ALL Y K+G + D
Sbjct: 298 TGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKD 357
Query: 177 ARDVFDGMDDRDVV----AWTAMICGYAKVAMMVEARWLFDNMG----ERNSFTWTTMVA 228
A + M+ R V ++ +I Y AR + M + NSF ++ ++A
Sbjct: 358 AESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLA 417
Query: 229 GYASCGD----MKAAKELYDVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGI---PVPQ 281
G+ G+ + KE+ + D + +I +GK + A FD + +
Sbjct: 418 GFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP 477
Query: 282 DASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALT 341
D TW ++ C+ ++G EMF
Sbjct: 478 DRVTWNTLIDCHCKHGRHIVAEEMF----------------------------------- 502
Query: 342 DHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEH 397
+ +E C N +IN + D R M+ + ++ T++ ++ + +
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562
Query: 398 GKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH 457
G+ DAI+ M GLKP+ + ++NA + GL E+ F++MT ++P
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD-GLKPSLLA 621
Query: 458 YACIVDLLGRAGQLERAYSLI---KENATSADATTWGSLLAA 496
+++ G + A++++ KEN D T+ +L+ A
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 145/385 (37%), Gaps = 33/385 (8%)
Query: 192 WTAMICGYAKVAMMVEARWLFDNMGERNSFTWTTMVAGYASCGDMKAAKELYDVMSD--- 248
++ +I + + EA +L T+ ++ A D++ A L M
Sbjct: 170 YSILIHALGRSEKLYEA-FLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGY 228
Query: 249 -KDGVTWVAMIAGYGKLGNVTEAR--RLFDGI---PVPQDASTWAAMLACYAQNGYAKEG 302
D V + +I + + RL+ I + D ++ +A++G +
Sbjct: 229 QSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKA 288
Query: 303 IEMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINM 362
+++ + + +V ISA A + AL + + + NAL+
Sbjct: 289 LQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKG 348
Query: 363 HSKCGNIDLAWREFSTMRCR----DMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPN 418
+ K G + A S M R D +TYS +I A+ G+ + A + M ++PN
Sbjct: 349 YVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPN 408
Query: 419 QVTFIGVLNACSSSGLVEEGCRFFQIMTGV--FDIEPLPEHYACIVDLLGRAGQLERA-- 474
F +L G E + FQ++ + ++P + Y ++D G+ L+ A
Sbjct: 409 SFVFSRLLAGFRDRG---EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 475 -YSLIKENATSADATTWGSLLAACRVHGNVELGETAARHLLEIDPEDSG------TYVLL 527
+ + D TW +L+ HG + E + E G TY ++
Sbjct: 466 TFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM-----ERRGCLPCATTYNIM 520
Query: 528 ANMYASQDKWVGAEVVKKLMSKKGI 552
N Y Q++W + + M +GI
Sbjct: 521 INSYGDQERWDDMKRLLGKMKSQGI 545
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 204/507 (40%), Gaps = 47/507 (9%)
Query: 84 CPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLN-AC--GRVPAMV 140
CPD + LI L F +M +SG P+ T+++VL+ C GR A +
Sbjct: 230 CPDVATFNILINV-LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288
Query: 141 EGKQVHGRLVQSGFGGNKIVQTALLGMYAKSGCVCDA----RDVFDGMDDRDVVAWTAMI 196
E + + G + L+ +S + RD+ M + V + +I
Sbjct: 289 E---LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 197 CGYAKVAMMVEARWLFDNMGE----RNSFTWTTMVAGYASCGDMKAAKELYDVMSDK--- 249
G++ ++ A L + M N T+ ++ G+ S G+ K A +++ +M K
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 250 -DGVTWVAMIAGYGKLGNVTEARRLF-----DGIPVPQDASTWAAMLACYAQNGYAKEGI 303
V++ ++ G K AR + +G+ V + T+ M+ +NG+ E +
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR--ITYTGMIDGLCKNGFLDEAV 463
Query: 304 EMFKEVRQAKIKITEVAMVGAISACAQLRDIRMSNALTDHIEEGCCDRTLIVSNALINMH 363
+ E+ + I V I+ ++ + + + I I+ + LI
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Query: 364 SKCGNIDLAWREFSTM----RCRDMYTYSAMITAFAEHGKSQDAIDLFFRMPKEGLKPNQ 419
+ G + A R + M RD +T++ ++T+ + GK +A + M +G+ PN
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 420 VTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH--YACIVDLLGRAGQLERAYSL 477
V+F ++N +SG EG + F + + + P Y ++ L + G L A
Sbjct: 584 VSFDCLINGYGNSG---EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 478 IKE---NATSADATTWGSLLAACRVHGNVE-----LGETAARHLLEIDPEDSGTYVLLAN 529
+K + D + +LL A GN+ GE R +L DS TY L +
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL----PDSYTYTSLIS 696
Query: 530 MYASQDKWVGAEVVKKLMSKKGIKKPS 556
+ K V A + K +G P+
Sbjct: 697 GLCRKGKTVIAILFAKEAEARGNVLPN 723
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/421 (20%), Positives = 170/421 (40%), Gaps = 63/421 (14%)
Query: 109 STYARMHQSGVLPSGFTFSSVLNACGRVPAMVEGKQVHGRLVQSGFGGNKIVQTALLGMY 168
S M + + P TF+ ++N + + + ++ +SG+ + +L Y
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 169 AKSGCVCDARDVFDGMD----DRDVVAWTAMICGYAKVAMMVEARWLFDNMGER----NS 220
K G A ++ D M D DV + +I + + + L +M +R N
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 221 FTWTTMVAGYASCGDMKAAKELYDVMSD----KDGVTWVAMIAGYGKLGNVTEARRLFDG 276
T+ T++ G+++ G + A +L + M + VT+ A+I G+ GN EA ++F
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 277 IP----VPQDASTWAAMLACYAQNGYAKEGIEMFKEVRQAKIKITEVAMVGAISACAQLR 332
+ P + S + +L +N + +++ + + + G I +
Sbjct: 399 MEAKGLTPSEVS-YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK-- 455
Query: 333 DIRMSNALTDHIEEGCCDRTLIVSNALINMHSKCGNIDLAWREFSTMRCRDMYTYSAMIT 392
G D ++ L+N SK G ID D+ TYSA+I
Sbjct: 456 -------------NGFLDEAVV----LLNEMSKDG-ID-----------PDIVTYSALIN 486
Query: 393 AFAEHGKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIE 452
F + G+ + A ++ R+ + GL PN + + ++ C G ++E R ++ M
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI------ 540
Query: 453 PLPEH------YACIVDLLGRAGQLERAYSLIKENATSADATTWGSLLAACRVHGNVELG 506
L H + +V L +AG++ A ++ ++D ++ C ++G G
Sbjct: 541 -LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR--CMTSDGILPNTVSFDCLINGYGNSG 597
Query: 507 E 507
E
Sbjct: 598 E 598
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 195/460 (42%), Gaps = 61/460 (13%)
Query: 76 KLFDTMPNCPDAFIWTSLIRAFLSHRAHFRHCISTYARMHQSGVLPSGFTFSSVLNACGR 135
K +P D ++ +L+ A + + +S + M Q +LP +T++S+++ R
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTA-MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Query: 136 ----VPAMVEGKQVHGRLVQSGFGGNKIVQTALL-GMYA----KSGCVCDARDVFDGMDD 186
V A++ K+ R NK++ T + GM+ K+G R+ D +
Sbjct: 701 KGKTVIAILFAKEAEAR---GNVLPNKVMYTCFVDGMFKAGQWKAGIY--FREQMDNLGH 755
Query: 187 R-DVVAWTAMICGYAKVAMMVEARWLFDNMGERNS----FTWTTMVAGYASCGDMKAAKE 241
D+V AMI GY+++ + + L MG +N T+ ++ GY+ D+ +
Sbjct: 756 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 815
Query: 242 LY------DVMSDKDGVTWVAMIAGYGKLGNVTEARRLFDGIPVPQ---------DASTW 286
LY ++ DK +T +++ G + E+ L G+ + + D T+
Sbjct: 816 LYRSIILNGILPDK--LTCHSLVLG------ICESNMLEIGLKILKAFICRGVEVDRYTF 867
Query: 287 AAMLACYAQNGYAKEGIEMFKEVRQAKIKI---TEVAMVGAISACAQLRDIRMSNALTDH 343
+++ NG ++ K + I + T AMV ++ + ++ RM L +
Sbjct: 868 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM--VLHEM 925
Query: 344 IEEGCC--DRTLIVSNALINMHSKCGNIDLAWREFSTMR----CRDMYTYSAMITAFAEH 397
++G R I LIN + G+I A+ M C SAM+ A A+
Sbjct: 926 SKQGISPESRKYI---GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 982
Query: 398 GKSQDAIDLFFRMPKEGLKPNQVTFIGVLNACSSSGLVEEGCRFFQIMTGVFDIEPLPEH 457
GK+ +A L M K L P +F +++ C +G V E +M+ L +
Sbjct: 983 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1042
Query: 458 YACIVDLLGRAGQLERAYSLIKE---NATSADATTWGSLL 494
I L + G + A+ L +E + A+ATT+ +L+
Sbjct: 1043 NVLITGLCAK-GDMALAFELYEEMKGDGFLANATTYKALI 1081