Miyakogusa Predicted Gene

Lj0g3v0112609.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0112609.1 Non Chatacterized Hit- tr|B9R7S1|B9R7S1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,35.34,0.0000000000001,seg,NULL,CUFF.6538.1
         (671 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G56870.1 | Symbols:  | unknown protein; Has 204 Blast hits to...   128   1e-29

>AT3G56870.1 | Symbols:  | unknown protein; Has 204 Blast hits to
           201 proteins in 58 species: Archae - 0; Bacteria - 10;
           Metazoa - 72; Fungi - 8; Plants - 41; Viruses - 0; Other
           Eukaryotes - 73 (source: NCBI BLink). |
           chr3:21053077-21055518 FORWARD LENGTH=700
          Length = 700

 Score =  128 bits (322), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 133/246 (54%), Gaps = 28/246 (11%)

Query: 415 ERLLSTRKAISPSSQEKLCKAMESMDN--YNNLKSRSRLYFLAQSIKNGAAKGPNDIMGA 472
           E LLS RKA+SP+SQEKL KAME  D+    + KSR +LYF +Q+         + I+ A
Sbjct: 449 ENLLSGRKALSPTSQEKLRKAMEHPDSPEKRSKKSRGKLYFSSQN--------SHRILKA 500

Query: 473 GFTDNPNKISARAKTFQGVS----------HSKGTSRIPHSSRPATRRD-----CSSEQS 517
              DN +++     + Q +           + + T + P  +  A +        +S Q 
Sbjct: 501 QGLDNIDRVEIIPSSKQAIQKATNNTRQMKYQRATHKFPRRNTQAAKAQPFSTGGTSIQG 560

Query: 518 FPNNAITFTKRQMQDTECIALKLTKELKSMKDILDDMLRSQFCLNTSLRHKVNEARMAVK 577
               AI F++ QM+D + +A +LTKELKSM+ I    L+++   +      ++E +  + 
Sbjct: 561 CSQKAIAFSQGQMRDFQNVAARLTKELKSMRQITKRCLQAESNTSNMSDCNLDEVKTVIG 620

Query: 578 NATRAEEAAKRCLSFMARDCNRFCRIMKLADAGPSPTPPQDVVRKEKKKIAFADEAGGSL 637
           NA + EE+ K+ LS + RDCNRFC++M +       +P  + +  +KKKI FAD+AGG L
Sbjct: 621 NAEKTEESCKKWLSIIERDCNRFCKLMSMVRED---SPATENIVHKKKKIRFADDAGGDL 677

Query: 638 CQVRVY 643
           C V+V+
Sbjct: 678 CHVKVF 683



 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 32/166 (19%)

Query: 1   MELRSC----SHHHYIQAIKDGSVTKVLNVE-RGRPTLAFRDIADIYDCILLDSGDGKAE 55
           +ELRS     SH HYI+ IKDGS+  V+N++ R +P L FR + DIY+       D +  
Sbjct: 2   VELRSSTHLNSHVHYIRTIKDGSIKIVMNMDGRRKPKLKFRQLVDIYNL-----EDSQGV 56

Query: 56  RSCAGVVKERIVKTEPDAWECNANDGDDQRINDLDDDGFDNFTLKQIKESCKTRKRKHSH 115
            S   VV+             + ++G D       +D F   TL+ I++ CK RKRK  +
Sbjct: 57  ESIPRVVR-------------DLDNGSDFTQGSESED-FSMTTLEMIQKQCKERKRKLRN 102

Query: 116 GLDSSKKRKIKVEDLSFPEDYRKKQMAADDS-DLMETLCSWRSKLS 160
             D++ +    VE        +K+ +  D+  D+ E L SW +K S
Sbjct: 103 CRDTTTETFSNVE-------VKKEYVTQDEGCDIEEPLSSWDTKFS 141