Miyakogusa Predicted Gene

Lj0g3v0112529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0112529.1 Non Chatacterized Hit- tr|I1ML39|I1ML39_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55618
PE,72.6,0,Thioredoxin,Thioredoxin domain; no
description,Thioredoxin-like fold;
THIOREDOXIN_2,Thioredoxin-like,CUFF.6534.1
         (198 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08570.1 | Symbols: ACHT4 | atypical CYS  HIS rich thioredoxi...   241   3e-64
AT1G08570.2 | Symbols: ACHT4 | atypical CYS  HIS rich thioredoxi...   220   4e-58
AT2G33270.1 | Symbols: ACHT3 | atypical CYS  HIS rich thioredoxi...   196   8e-51
AT1G08570.4 | Symbols: ACHT4 | atypical CYS  HIS rich thioredoxi...   187   5e-48
AT1G08570.3 | Symbols: ACHT4 | atypical CYS  HIS rich thioredoxi...   187   5e-48
AT5G61440.1 | Symbols: ACHT5 | atypical CYS  HIS rich thioredoxi...   177   6e-45
AT4G26160.1 | Symbols: ACHT1 | atypical CYS  HIS rich thioredoxi...   135   1e-32
AT4G29670.2 | Symbols: ACHT2 | atypical CYS  HIS rich thioredoxi...   124   3e-29
AT4G29670.1 | Symbols: ACHT2 | atypical CYS  HIS rich thioredoxi...   124   6e-29
AT5G16400.1 | Symbols: TRXF2, ATF2 | thioredoxin F2 | chr5:53639...    51   5e-07
AT3G02730.1 | Symbols: TRXF1, ATF1 | thioredoxin F-type 1 | chr3...    49   2e-06

>AT1G08570.1 | Symbols: ACHT4 | atypical CYS  HIS rich thioredoxin 4
           | chr1:2713059-2714312 FORWARD LENGTH=275
          Length = 275

 Score =  241 bits (614), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 126/203 (62%), Positives = 142/203 (69%), Gaps = 16/203 (7%)

Query: 1   MAEVFTNTSLVSSWLGHTQQHHHNQKLMVSKVAKSC-----SFPSLKLKSQALRSSPFSS 55
           M EV + TSL   +LG    HH       S V+        SF  LKLKSQ     P  S
Sbjct: 1   MTEVISKTSL---FLGACGNHHRVDDFSFSPVSFGGFGLKKSFSCLKLKSQ----KPLRS 53

Query: 56  EFHGKKPVFRVNRAISSRPRSQFPPSNGVQMTLRLGKVQKWWEKGLQPNMREVTSAEDLV 115
            F+GK+ VF  ++  S R  S        Q TLR+G  QKWWEKGL+ NMRE++SA++LV
Sbjct: 54  VFYGKQIVFGDSQDESFRRSSAIT----AQTTLRIGTAQKWWEKGLKDNMREISSAQELV 109

Query: 116 DSLLNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDVQFLHVNYEEHKSMCYSLNVH 175
           DSL NAGDKLV+VDFFSPGCGGCKALHPKICQ AEMNPDVQFL VNYEEHKSMCYSL VH
Sbjct: 110 DSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHKSMCYSLGVH 169

Query: 176 VLPFFRFYRGAHGRLCSFSCTNA 198
           VLPFFRFYRG+ GR+CSFSCTNA
Sbjct: 170 VLPFFRFYRGSQGRVCSFSCTNA 192


>AT1G08570.2 | Symbols: ACHT4 | atypical CYS  HIS rich thioredoxin 4
           | chr1:2713059-2714312 FORWARD LENGTH=244
          Length = 244

 Score =  220 bits (561), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 96/115 (83%), Positives = 105/115 (91%)

Query: 84  VQMTLRLGKVQKWWEKGLQPNMREVTSAEDLVDSLLNAGDKLVIVDFFSPGCGGCKALHP 143
            Q TLR+G  QKWWEKGL+ NMRE++SA++LVDSL NAGDKLV+VDFFSPGCGGCKALHP
Sbjct: 47  AQTTLRIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHP 106

Query: 144 KICQLAEMNPDVQFLHVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNA 198
           KICQ AEMNPDVQFL VNYEEHKSMCYSL VHVLPFFRFYRG+ GR+CSFSCTNA
Sbjct: 107 KICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNA 161


>AT2G33270.1 | Symbols: ACHT3 | atypical CYS  HIS rich thioredoxin 3
           | chr2:14103681-14105204 FORWARD LENGTH=273
          Length = 273

 Score =  196 bits (498), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 86/124 (69%), Positives = 104/124 (83%)

Query: 75  RSQFPPSNGVQMTLRLGKVQKWWEKGLQPNMREVTSAEDLVDSLLNAGDKLVIVDFFSPG 134
           + + P     Q +L +G+ QKWWEK L+PNM+ VTS +DLV SL NAGDKLV+VDFFSP 
Sbjct: 65  KKKIPAFVRCQTSLGIGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPS 124

Query: 135 CGGCKALHPKICQLAEMNPDVQFLHVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFS 194
           CGGCKALHPKIC++AE NP+V+FL VNYEEH+S+C SLN+HVLPFFRFYRG+ GR+CSFS
Sbjct: 125 CGGCKALHPKICKIAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFS 184

Query: 195 CTNA 198
           CTNA
Sbjct: 185 CTNA 188


>AT1G08570.4 | Symbols: ACHT4 | atypical CYS  HIS rich thioredoxin 4
           | chr1:2713604-2714312 FORWARD LENGTH=177
          Length = 177

 Score =  187 bits (474), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 82/94 (87%), Positives = 89/94 (94%)

Query: 105 MREVTSAEDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDVQFLHVNYEE 164
           MRE++SA++LVDSL NAGDKLV+VDFFSPGCGGCKALHPKICQ AEMNPDVQFL VNYEE
Sbjct: 1   MREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEE 60

Query: 165 HKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNA 198
           HKSMCYSL VHVLPFFRFYRG+ GR+CSFSCTNA
Sbjct: 61  HKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNA 94


>AT1G08570.3 | Symbols: ACHT4 | atypical CYS  HIS rich thioredoxin 4
           | chr1:2713604-2714312 FORWARD LENGTH=177
          Length = 177

 Score =  187 bits (474), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 82/94 (87%), Positives = 89/94 (94%)

Query: 105 MREVTSAEDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDVQFLHVNYEE 164
           MRE++SA++LVDSL NAGDKLV+VDFFSPGCGGCKALHPKICQ AEMNPDVQFL VNYEE
Sbjct: 1   MREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEE 60

Query: 165 HKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNA 198
           HKSMCYSL VHVLPFFRFYRG+ GR+CSFSCTNA
Sbjct: 61  HKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNA 94


>AT5G61440.1 | Symbols: ACHT5 | atypical CYS  HIS rich thioredoxin 5
           | chr5:24707658-24708684 FORWARD LENGTH=245
          Length = 245

 Score =  177 bits (448), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 84/161 (52%), Positives = 109/161 (67%), Gaps = 12/161 (7%)

Query: 38  FPSLKLKSQALRSSPFSSEFHGKKPVFRVNRAISSRPRSQFPPSNGVQMTLRLGKVQKWW 97
           F SL LK   + S+ F+            N+ +++   S   P      ++ + +  +WW
Sbjct: 32  FMSLDLKEHPMASADFT------------NQTLTAFSSSSASPFQAKTSSIGMSRGMRWW 79

Query: 98  EKGLQPNMREVTSAEDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDVQF 157
           EK    NM E+ SA  LVDSLLNAGD+LV++DF+SPGCGGCK+LHPKICQLAE NP+V F
Sbjct: 80  EKSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLAETNPNVMF 139

Query: 158 LHVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNA 198
           L VN EE ++MC+ LNVHVLPFF+FYRGA G++CSFSCT A
Sbjct: 140 LKVNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIA 180


>AT4G26160.1 | Symbols: ACHT1 | atypical CYS  HIS rich thioredoxin 1
           | chr4:13255296-13256632 FORWARD LENGTH=221
          Length = 221

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 57/104 (54%), Positives = 82/104 (78%)

Query: 95  KWWEKGLQPNMREVTSAEDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPD 154
           KWWE+   PNM ++TSAE  +++L +AGD+LVIVDF+   CG C+A+ PK+C+ A+ +P+
Sbjct: 85  KWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKEHPN 144

Query: 155 VQFLHVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNA 198
           + FL VN++E+KS+C SLNV VLP+F FYRGA G++ SFSC+ A
Sbjct: 145 ILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLA 188


>AT4G29670.2 | Symbols: ACHT2 | atypical CYS  HIS rich thioredoxin 2
           | chr4:14535983-14537108 REVERSE LENGTH=236
          Length = 236

 Score =  124 bits (312), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 1/104 (0%)

Query: 95  KWWEKGLQPNMREVTSAEDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPD 154
           KWWE+   PNM ++ S E+ + +L  AG++LVIV+F+   C  C+AL PK+C+ A  +PD
Sbjct: 96  KWWERN-APNMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPD 154

Query: 155 VQFLHVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNA 198
           + FL VN++E+K MC SLNV VLPFF FYRGA G+L SFSC+ A
Sbjct: 155 IVFLKVNFDENKPMCKSLNVRVLPFFHFYRGADGQLESFSCSLA 198


>AT4G29670.1 | Symbols: ACHT2 | atypical CYS  HIS rich thioredoxin 2
           | chr4:14535772-14537108 REVERSE LENGTH=235
          Length = 235

 Score =  124 bits (310), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 1/104 (0%)

Query: 95  KWWEKGLQPNMREVTSAEDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPD 154
           KWWE+   PNM ++ S E+ + +L  AG++LVIV+F+   C  C+AL PK+C+ A  +PD
Sbjct: 96  KWWERN-APNMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPD 154

Query: 155 VQFLHVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNA 198
           + FL VN++E+K MC SLNV VLPFF FYRGA G+L SFSC+ A
Sbjct: 155 IVFLKVNFDENKPMCKSLNVRVLPFFHFYRGADGQLESFSCSLA 198


>AT5G16400.1 | Symbols: TRXF2, ATF2 | thioredoxin F2 |
           chr5:5363905-5365249 REVERSE LENGTH=185
          Length = 185

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 121 AGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDVQFLHVN-YEEHKSMCYSLNVHVLPF 179
           AGDK+V++D ++  CG CK + PK  +L+E   D+ FL ++  +++K +   L + V+P 
Sbjct: 95  AGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPT 154

Query: 180 FRFYR 184
           F+  +
Sbjct: 155 FKILK 159


>AT3G02730.1 | Symbols: TRXF1, ATF1 | thioredoxin F-type 1 |
           chr3:588570-589591 REVERSE LENGTH=178
          Length = 178

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 121 AGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDVQFLHVNYE-EHKSMCYSLNVHVLPF 179
           AG+KLV++D ++  CG CK + PK   L+E   DV FL ++   +++ +   L + V+P 
Sbjct: 85  AGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPT 144

Query: 180 FRFYR 184
           F+  +
Sbjct: 145 FKILK 149