Miyakogusa Predicted Gene

Lj0g3v0112259.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0112259.2 tr|G7JBZ6|G7JBZ6_MEDTR HORMA domain-containing
protein OS=Medicago truncatula GN=MTR_3g085380 PE=4
S,87.35,0,HORMA,DNA-binding HORMA; The spindle assembly checkpoint
protein mad2,DNA-binding HORMA; no descript,CUFF.6509.2
         (536 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67370.1 | Symbols: ASY1, ATASY1 | DNA-binding HORMA family p...   519   e-147
AT4G32200.1 | Symbols: ASY2 | DNA-binding HORMA family protein |...   273   2e-73

>AT1G67370.1 | Symbols: ASY1, ATASY1 | DNA-binding HORMA family
           protein | chr1:25239347-25243713 REVERSE LENGTH=596
          Length = 596

 Score =  519 bits (1336), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/338 (74%), Positives = 296/338 (87%), Gaps = 3/338 (0%)

Query: 1   MVVAQKLKESEITEQHSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLM 60
           MV+AQKLKE+EITEQ SLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPAL+MKIKKLM
Sbjct: 1   MVMAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALDMKIKKLM 60

Query: 61  PVDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSASENEEVS 120
           P+DAESRRLIDWMEKGVYDALQ+KYLKTL+F +CE VDGPMIEEY+FSFSYS S++++V 
Sbjct: 61  PMDAESRRLIDWMEKGVYDALQRKYLKTLMFSICETVDGPMIEEYSFSFSYSDSDSQDVM 120

Query: 121 MNINRIGNEKQGGTFKHNSTADITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLL 180
           MNINR GN+K GG F  NSTADITP QMRSSACKM+RTLVQLMRTL+KMP+ERTI+MKLL
Sbjct: 121 MNINRTGNKKNGGIF--NSTADITPNQMRSSACKMVRTLVQLMRTLDKMPDERTIVMKLL 178

Query: 181 YYDDVTPPDYEPPFFRGCTEEEAYHQWEKNPLKMEVGDVNSKHFVLALKVKSVLDPCEDD 240
           YYDDVTPPDYEPPFFRGCTE+EA + W KNPL+ME+G+VNSKH VL LKVKSVLDPCED+
Sbjct: 179 YYDDVTPPDYEPPFFRGCTEDEAQYVWTKNPLRMEIGNVNSKHLVLTLKVKSVLDPCEDE 238

Query: 241 NEGMQDD-ISTGDDSMQRDEYYETDSEVDHSQGDHYIVAPIEKQQAQEDNGVIDEDTQDP 299
           N+ MQDD  S G DS+  D+  ++DSE+  +Q + +IVAP+EKQ   +     D++TQDP
Sbjct: 239 NDDMQDDGKSIGPDSVHDDQPSDSDSEISQTQENQFIVAPVEKQDDDDGEVDEDDNTQDP 298

Query: 300 VEDEQQLLRVREWINCCHLDTIELTDVLSNFPDISVAL 337
            E+EQQL RV++WIN  HLDT+ELTD+L+NFPDIS+ L
Sbjct: 299 AENEQQLARVKDWINSRHLDTLELTDILANFPDISIVL 336



 Score =  162 bits (411), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 129/213 (60%), Gaps = 27/213 (12%)

Query: 336 ALYHALPMTYVSVAKLQGLLEGKVNQTAARKMIDKMIRDGFVEPKGNKRLGKRVIHSELT 395
           ALYH+LPM YV++ KL  +L+G+ NQTA RK++D+M ++G+VE   N+RLGKRVIHS LT
Sbjct: 397 ALYHSLPMKYVTITKLHNMLDGEANQTAVRKLMDRMTQEGYVEASSNRRLGKRVIHSSLT 456

Query: 396 ERKFIEVQKTLTAAEAMDVDNCEP-NK------------STCGVLHSIGSDLTRMIVTSD 442
           E+K  EV+K L A + MDVD  E  NK            STCG +HSIGSD TR    S 
Sbjct: 457 EKKLNEVRKVL-ATDDMDVDVTETINKTNGPDAKVTADVSTCGGIHSIGSDFTRTKGRSG 515

Query: 443 TNYSDFKSGHKTPKAKEPGSNPTSRTEPVTSRESFAQGKENSTANGNRIANHGDDEVAET 502
               +     +   +K   +  +++ +P  SRESFA              + G  + AET
Sbjct: 516 GMQQNGSVLSEQTISKAGNTPISNKAQPAASRESFA-------------VHGGAVKEAET 562

Query: 503 IICSRSSQDKRPRKTSAVKEPIHQNVKRQRSQA 535
           + CS++SQD+R RKTS V+EPI Q  KRQ+SQA
Sbjct: 563 VNCSQASQDRRGRKTSMVREPILQYSKRQKSQA 595


>AT4G32200.1 | Symbols: ASY2 | DNA-binding HORMA family protein |
           chr4:15548840-15554962 FORWARD LENGTH=1399
          Length = 1399

 Score =  273 bits (699), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/278 (56%), Positives = 190/278 (68%), Gaps = 29/278 (10%)

Query: 10  SEITEQHSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPVDAESRRL 69
           S+  EQ SL+LT  LLR AIFNISYIRGLFP +YF D SVPAL++K+KKLMP+DAESRRL
Sbjct: 5   SKNNEQQSLILTTELLRTAIFNISYIRGLFPVRYFKDMSVPALDLKMKKLMPMDAESRRL 64

Query: 70  IDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSASENEEVSMNINRIGNE 129
           I WMEKGVYDAL KK+LK L+F +CE VDGP+IEEY FSFSYS S++++V MNIN  G  
Sbjct: 65  IGWMEKGVYDALHKKHLKKLIFYICETVDGPLIEEYIFSFSYSDSDSQDVRMNINITGIN 124

Query: 130 KQGGTFKH---NSTADITPQQMRS------SACKMIRTLVQLMRTLEKMP---------- 170
             GGT      NSTAD+T  QM S         +     V   R    +           
Sbjct: 125 TYGGTLNSTADNSTADMTLNQMSSVDEDFGQNARRSNAFVTYQRFSVYISFHIANYRLCY 184

Query: 171 ----EERTILMKLLYYDDVTPPDYEPPFFRGCT-EEEAYHQWEKNPLKMEVGDVNSKHFV 225
                +RTILMKLLYY+ V PPDY+PPFFRGC+ EEEA + W K PL+ME+G+VNS+H V
Sbjct: 185 FFASVQRTILMKLLYYEYV-PPDYQPPFFRGCSEEEEAQYVWPKIPLRMEIGNVNSQHHV 243

Query: 226 LALKVKSVL---DPCEDDNEGMQDD-ISTGDDSMQRDE 259
           L +KVKSVL   DPCED+N+ MQDD  S G DS+  D+
Sbjct: 244 LTVKVKSVLDPYDPCEDENDNMQDDERSKGPDSLHDDQ 281