Miyakogusa Predicted Gene
- Lj0g3v0112069.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0112069.1 Non Chatacterized Hit- tr|K3XIB4|K3XIB4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001636,44.04,0.0000000000003,B-Box-type zinc finger,Zinc finger,
B-box; FAMILY NOT NAMED,NULL; seg,NULL; zf-B_box,Zinc finger,
B-,CUFF.6501.1
(292 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc f... 264 5e-71
AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protei... 262 2e-70
AT1G06040.1 | Symbols: STO | B-box zinc finger family protein | ... 156 2e-38
AT1G06040.2 | Symbols: STO | B-box zinc finger family protein | ... 152 2e-37
AT2G31380.1 | Symbols: STH | salt tolerance homologue | chr2:133... 143 1e-34
AT4G10240.1 | Symbols: | B-box zinc finger family protein | chr... 137 6e-33
AT4G39070.1 | Symbols: | B-box zinc finger family protein | chr... 127 7e-30
AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 | chr1:283... 126 1e-29
AT4G38960.1 | Symbols: | B-box type zinc finger family protein ... 103 2e-22
AT2G21320.1 | Symbols: | B-box zinc finger family protein | chr... 102 3e-22
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 83 3e-16
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 82 4e-16
AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 82 5e-16
AT4G38960.3 | Symbols: | B-box type zinc finger family protein ... 82 6e-16
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 82 6e-16
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487... 80 2e-15
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w... 75 4e-14
AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein w... 74 1e-13
AT2G47890.1 | Symbols: | B-box type zinc finger protein with CC... 68 7e-12
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 67 2e-11
AT2G47890.2 | Symbols: | B-box type zinc finger protein with CC... 66 3e-11
AT4G38960.2 | Symbols: | B-box type zinc finger family protein ... 61 8e-10
AT2G33500.2 | Symbols: | B-box type zinc finger protein with CC... 60 2e-09
AT2G33500.1 | Symbols: | B-box type zinc finger protein with CC... 60 2e-09
AT1G28050.1 | Symbols: | B-box type zinc finger protein with CC... 59 3e-09
AT1G68190.1 | Symbols: | B-box zinc finger family protein | chr... 56 2e-08
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 56 2e-08
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 56 2e-08
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 56 2e-08
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 56 2e-08
AT5G48250.1 | Symbols: | B-box type zinc finger protein with CC... 54 1e-07
AT5G54470.1 | Symbols: | B-box type zinc finger family protein ... 54 2e-07
AT4G27310.1 | Symbols: | B-box type zinc finger family protein ... 53 3e-07
AT4G15250.1 | Symbols: | B-box type zinc finger protein with CC... 49 3e-06
AT3G21880.1 | Symbols: | B-box type zinc finger protein with CC... 49 4e-06
AT1G25440.1 | Symbols: | B-box type zinc finger protein with CC... 49 6e-06
>AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc
finger protein 1 | chr1:29567370-29568662 FORWARD
LENGTH=299
Length = 299
Score = 264 bits (675), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 147/283 (51%), Positives = 190/283 (67%), Gaps = 20/283 (7%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
MKIQCNVCE AEA VLCCADEAALCW CDEK+HAANKLA KHQRVPLS S+S +PKCDIC
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEATEPGASSTSLKS 120
QEA G+FFCL+DRALLCRKCD++IHT N +VS HQRFLLTG++VGLE+ + G S+ S +
Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120
Query: 121 DSGEKNSDTKSSSVSRKVSAMLQSSDYNEVLPTEVGGFGEFPPAKAS---------YGGG 171
+ +K +TK V + D++ + G P K + G
Sbjct: 121 ND-DKTMETK-PFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLPLVSSG 178
Query: 172 STAGNISQWSIDDFFGINEFSQNYNYMD--GSSRADS--CKLGDSDSPFLRSGEDEMEDD 227
ST G+I QW I++ FG+ +F Q+Y YM+ GSS+AD+ DS S + ED +++
Sbjct: 179 STTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKADTSRRGDSDSSSMMRSAEEDGEDNN 238
Query: 228 DCLGRVPDSSLSVPQIPSPPTASGLHWPKNPQYSSDSGLFVPD 270
+CLG ++S +VPQI SPPTASGL+WPK+ + S +FVPD
Sbjct: 239 NCLGG--ETSWAVPQIQSPPTASGLNWPKHFHHHS---VFVPD 276
>AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protein 1
| chr1:29567370-29568662 FORWARD LENGTH=319
Length = 319
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 190/303 (62%), Gaps = 40/303 (13%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
MKIQCNVCE AEA VLCCADEAALCW CDEK+HAANKLA KHQRVPLS S+S +PKCDIC
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEATEPGASSTSLKS 120
QEA G+FFCL+DRALLCRKCD++IHT N +VS HQRFLLTG++VGLE+ + G S+ S +
Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120
Query: 121 DSGEKNSDTKSSSVSRKVSAMLQSSDYNEVLPTEVGGFGEFPPAKAS---------YGGG 171
+ +K +TK V + D++ + G P K + G
Sbjct: 121 ND-DKTMETK-PFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLPLVSSG 178
Query: 172 STAGNISQWSIDDFFGINEFSQNYNYMD--GSSRADSCKLGDSDSPFL------------ 217
ST G+I QW I++ FG+ +F Q+Y YM+ GSS+ D K+ DS L
Sbjct: 179 STTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKTDVLKMKLLDSACLGKKLEKADTSRR 238
Query: 218 ----------RSGEDEMEDDDCLGRVPDSSLSVPQIPSPPTASGLHWPKNPQYSSDSGLF 267
+ ED ++++CLG ++S +VPQI SPPTASGL+WPK+ + S +F
Sbjct: 239 GDSDSSSMMRSAEEDGEDNNNCLGG--ETSWAVPQIQSPPTASGLNWPKHFHHHS---VF 293
Query: 268 VPD 270
VPD
Sbjct: 294 VPD 296
>AT1G06040.1 | Symbols: STO | B-box zinc finger family protein |
chr1:1828662-1829659 REVERSE LENGTH=248
Length = 248
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 116/191 (60%), Gaps = 6/191 (3%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
MKIQC+VCE A A V+CCADEAALC CD ++HAANKLASKHQR+ L+ S+ P+CDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEATEPGASSTSLKS 120
QE + FC+EDRALLCR CD SIH AN+ + HQRFL TG++V L +T S K+
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTST--ICSKEIEKN 118
Query: 121 DSGEKNSDTKSSSVSRKVSAMLQSSDYNEV-LPTEVGGFGEFPPAKASYGGGST---AGN 176
N+ K++ + K ++ Q + LP V F F +++ G AG
Sbjct: 119 QPEPSNNQQKANQIPAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDKKGQLDLGAGE 178
Query: 177 ISQWSIDDFFG 187
+ +S FFG
Sbjct: 179 LDWFSDMGFFG 189
>AT1G06040.2 | Symbols: STO | B-box zinc finger family protein |
chr1:1828957-1829659 REVERSE LENGTH=177
Length = 177
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 85/109 (77%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
MKIQC+VCE A A V+CCADEAALC CD ++HAANKLASKHQR+ L+ S+ P+CDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEAT 109
QE + FC+EDRALLCR CD SIH AN+ + HQRFL TG++V L +T
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTST 109
>AT2G31380.1 | Symbols: STH | salt tolerance homologue |
chr2:13382150-13383302 FORWARD LENGTH=238
Length = 238
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 79/109 (72%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
MKIQC+VCE A A ++CCADEAALC CD +VHAANKLASKHQR+ L S+ P CDIC
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEAT 109
E + FC+EDRALLCR CD + H N + HQRFL TG+RV L +T
Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSST 109
>AT4G10240.1 | Symbols: | B-box zinc finger family protein |
chr4:6368967-6369526 REVERSE LENGTH=162
Length = 162
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 100/168 (59%), Gaps = 24/168 (14%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLS------LSSSHM 54
MKIQC VCE AEA+VLCC+DEA LC CD KVH ANKL +H RV L ++S
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60
Query: 55 PKCDICQEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEA-TEPGA 113
P CDICQE GYFFCLEDRA+LC CD +IHT N+ HQRFLL+GV+V ++ TE
Sbjct: 61 PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNS----HQRFLLSGVQVSDQSLTENSE 116
Query: 114 SSTSLKSDSGEKNSDTKSSSVSRKVSAMLQSSDYNEVLPTEVGGFGEF 161
STS S++ + + KVS Q S TE G GE
Sbjct: 117 CSTSFSSETYQ---------IQSKVSLNSQYSSEE----TEAGNSGEI 151
>AT4G39070.1 | Symbols: | B-box zinc finger family protein |
chr4:18205061-18206421 REVERSE LENGTH=242
Length = 242
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 90/153 (58%), Gaps = 8/153 (5%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPL-SLSSSHMPKCDI 59
MKI C VC+ EA V CCADEAALC CD VH ANKLA KH R L S + P CDI
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 60 CQEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLE-ATEPGASSTSL 118
C E FC EDRA+LCR+CD+ IH AN + H RFLLTGV++ + P AS+++
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120
Query: 119 KSDSGEKNSDTKSSSVSRKVSAMLQSSDYNEVL 151
+ G + KS VS+ + SS NEV
Sbjct: 121 AAAFGRAKTRPKS------VSSEVPSSASNEVF 147
>AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 |
chr1:28366059-28367398 FORWARD LENGTH=331
Length = 331
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 108/198 (54%), Gaps = 21/198 (10%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPL---SLSSSHMPKC 57
MKI+C+VC+ EA V C ADEA+LC CD +VH ANKLASKH R L S S++ P C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 58 DICQEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEATEPGASSTS 117
DICQ+ FC +DRA+LC+ CD SIH AN + H RFLLTGV+ L AT TS
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVK--LSATSSVYKPTS 118
Query: 118 LKSDSGEKNSD--TKSSSVS------RKVSAMLQSSDYNEVLPTEVGGFGEFPPAKASYG 169
S S N D SS+S + +SA QS N++ P F + AS
Sbjct: 119 KSSSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQS---NKIQP-----FSKINGGDASVN 170
Query: 170 GGSTAGNISQWSIDDFFG 187
+ IS++ +D G
Sbjct: 171 QWGSTSTISEYLMDTLPG 188
>AT4G38960.1 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=183
Length = 183
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
M+I C+ CE A A + C ADEAALC CDEKVH NKLAS+H RV L+ S+ P CDIC
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLA-EPSNAPCCDIC 59
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEATEPGASST 116
+ A +F+C D + LC +CD+ +H H RFLL R+ +P ++T
Sbjct: 60 ENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HGRFLLLRQRIEFPGDKPKENNT 113
>AT2G21320.1 | Symbols: | B-box zinc finger family protein |
chr2:9126502-9127652 FORWARD LENGTH=172
Length = 172
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
M+I C+ CE A A V C ADEAALC CDEKVH NKLAS+H RV L+ S+ P CDIC
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLA-DPSNAPSCDIC 59
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEATEP 111
+ A +F+C D + LC +CD+ +H H+RFLL R+ +P
Sbjct: 60 ENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HRRFLLLRQRIEFPGDKP 108
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQEAF 64
C+ C+ A + C AD A LC DCD K+H ANKLAS+H+RV L C++C++A
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58
Query: 65 GYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEATEPGASSTSLKSDSG 123
+ C D A LC CD IH+AN H+R +T + + +SS + + G
Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFVDEDG 117
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQEAF 64
C+ C A V C AD A LC CD +VHAAN+LAS+H+RV + C C+ A
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAP 62
Query: 65 GYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGV 102
FFC D A LC CD IH+AN HQR + +
Sbjct: 63 AAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPI 100
>AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567621 FORWARD LENGTH=220
Length = 220
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 16/153 (10%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQEAF 64
C+ C+ A + C AD A LC DCD K+H ANKLAS+H+RV L C++C++A
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58
Query: 65 GYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEATEPGASSTSLKSDSGE 124
+ C D A LC CD IH+AN H+R +T +A P S++S + E
Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPF---YDAVGPAKSASSSVNFVDE 115
Query: 125 KNSDTKSSSVSRK----VSAMLQSSDYNEVLPT 153
D +S + K ++ + DY ++ T
Sbjct: 116 DGGDVTASWLLAKEGIEITNLFSDLDYPKIEVT 148
>AT4G38960.3 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=226
Length = 226
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 70/159 (44%), Gaps = 46/159 (28%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEK----------------------------- 31
M+I C+ CE A A + C ADEAALC CDEK
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60
Query: 32 --------------VHAANKLASKHQRVPLSLSSSHMPKCDICQEAFGYFFCLEDRALLC 77
VH NKLAS+H RV L+ S+ P CDIC+ A +F+C D + LC
Sbjct: 61 IKMGTFCLQSLHLVVHMCNKLASRHVRVGLA-EPSNAPCCDICENAPAFFYCEIDGSSLC 119
Query: 78 RKCDLSIHTANAYVSGHQRFLLTGVRVGLEATEPGASST 116
+CD+ +H H RFLL R+ +P ++T
Sbjct: 120 LQCDMVVHVGGKRT--HGRFLLLRQRIEFPGDKPKENNT 156
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQEAF 64
C+ C+ A A + C D A LC CD KVHAANKLAS+H RV + C++C++A
Sbjct: 50 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAP 100
Query: 65 GYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLT 100
+ C D A LC CD IH+AN H+R +T
Sbjct: 101 AHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 136
>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
chr3:487438-488624 REVERSE LENGTH=347
Length = 347
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQEAF 64
C+ C A V C AD A LC CD +VHAAN++AS+H+RV + C C+ A
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAP 66
Query: 65 GYFFCLEDRALLCRKCDLSIHTANAYVSGHQR 96
F C D A LC CD IH+AN HQR
Sbjct: 67 AAFLCKADAASLCTACDAEIHSANPLARRHQR 98
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPL 47
C CE A A LC AD A+LC CD ++H+AN LA +HQRVP+
Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPI 101
>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
Length = 373
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQEAF 64
C+ C V C AD A LC CD +VH+AN++AS+H+RV + C+ C+ A
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAP 70
Query: 65 GYFFCLEDRALLCRKCDLSIHTANAYVSGHQR 96
F C D A LC CD +H+AN HQR
Sbjct: 71 AAFLCEADDASLCTACDSEVHSANPLARRHQR 102
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPL 47
C CE A A LC AD+A+LC CD +VH+AN LA +HQRVP+
Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
>AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171873-5172697 REVERSE LENGTH=274
Length = 274
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQEAF 64
C+ C V C AD A LC CD +VH+AN++AS+H+RV + C+ C+ A
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAP 70
Query: 65 GYFFCLEDRALLCRKCDLSIHTANAYVSGHQR 96
F C D A LC CD +H+AN HQR
Sbjct: 71 AAFLCEADDASLCTACDSEVHSANPLARRHQR 102
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPL 47
C CE A A LC AD+A+LC CD +VH+AN LA +HQRVP+
Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
>AT2G47890.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609476 FORWARD LENGTH=332
Length = 332
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQEAF 64
C+ C+ + A V C AD A LC CD++VH AN+L +KH R L CD C E+
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63
Query: 65 GYFFCLEDRALLCRKCDLSIHTANAYVSGHQRF 97
FC +R++LC+ CD HTA++ + + F
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASSSLHSRRPF 96
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 23/159 (14%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQEAF 64
C+ C+ A V C D A LC CD ++H+ ++H+RV + C++C++A
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV---------CEVCEQAP 68
Query: 65 GYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGVRVGLEATEPGASSTSLKSDSGE 124
C D A LC CD IH+AN S H+R V ++ E + S S G
Sbjct: 69 AAVTCKADAAALCVSCDADIHSANPLASRHER---VPVETFFDSAETAVAKISASSTFGI 125
Query: 125 KNSDTKSSSVSRKVSA-------MLQSSDYNEVLPTEVG 156
S T + V A L +D+NE E+G
Sbjct: 126 LGSSTTVDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIG 164
>AT2G47890.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609036 FORWARD LENGTH=237
Length = 237
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQEAF 64
C+ C+ + A V C AD A LC CD++VH AN+L +KH R L CD C E+
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63
Query: 65 GYFFCLEDRALLCRKCDLSIHTANAYVSGHQRF 97
FC +R++LC+ CD HTA++ + + F
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASSSLHSRRPF 96
>AT4G38960.2 | Symbols: | B-box type zinc finger family protein |
chr4:18162300-18163045 FORWARD LENGTH=150
Length = 150
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 36 NKLASKHQRVPLSLSSSHMPKCDICQEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQ 95
NKLAS+H RV L+ S+ P CDIC+ A +F+C D + LC +CD+ +H H
Sbjct: 3 NKLASRHVRVGLA-EPSNAPCCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HG 59
Query: 96 RFLLTGVRVGLEATEPGASST 116
RFLL R+ +P ++T
Sbjct: 60 RFLLLRQRIEFPGDKPKENNT 80
>AT2G33500.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=401
Length = 401
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 3 IQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQE 62
+ C C A + C AD A LC CD+ VH+AN L+ KH R + CD C +
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI---------CDNCSK 60
Query: 63 AFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTG 101
C D +LC++CD +H + + + H+R + G
Sbjct: 61 EPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEG 99
>AT2G33500.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=402
Length = 402
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 3 IQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQE 62
+ C C A + C AD A LC CD+ VH+AN L+ KH R + CD C +
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI---------CDNCSK 60
Query: 63 AFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTG 101
C D +LC++CD +H + + + H+R + G
Sbjct: 61 EPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEG 99
>AT1G28050.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:9775768-9777657 REVERSE LENGTH=433
Length = 433
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 2 KIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDICQ 61
++ C+ C A + C AD A LC CD++VH AN L+ KH R + CD C
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI---------CDNCG 56
Query: 62 EAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTG 101
C D +LC++CD +H + + H R + G
Sbjct: 57 NEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEG 96
>AT1G68190.1 | Symbols: | B-box zinc finger family protein |
chr1:25559384-25561004 FORWARD LENGTH=356
Length = 356
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
M+ C C+ A V C AD A LC CD KVH+AN L+ +H R L CD C
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL---------CDSC 60
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQR 96
+ C + + LC C+ H + S H+R
Sbjct: 61 KNQPCVVRCFDHKMFLCHGCNDKFHGGGS--SEHRR 94
>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
M C+ C + V C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIH 85
C+E+R LC+ CD S H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76
>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
M C+ C + V C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIH 85
C+E+R LC+ CD S H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76
>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
M C+ C + V C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIH 85
C+E+R LC+ CD S H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76
>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
M C+ C + V C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIH 85
C+E+R LC+ CD S H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76
>AT5G48250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr5:19561719-19563113 REVERSE LENGTH=373
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
M C+ C + V C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTA-NAYVSGHQR 96
C ++R LC+ CD S H N+ + H +
Sbjct: 52 NAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHK 88
>AT5G54470.1 | Symbols: | B-box type zinc finger family protein |
chr5:22114584-22115315 REVERSE LENGTH=215
Length = 215
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 2 KIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPL-SLSSSHMP 55
K +C +C G A++ C +D+A+LCWDCD KVH AN L +KH R L S SH P
Sbjct: 3 KKKCELCCGV-ARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTP 56
>AT4G27310.1 | Symbols: | B-box type zinc finger family protein |
chr4:13675853-13676616 FORWARD LENGTH=223
Length = 223
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPL 47
M +C++C G A++ C +D+A+LCWDCD KVH AN L +KH R L
Sbjct: 1 MGKKCDLCNGV-ARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLL 46
>AT4G15250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr4:8709942-8711106 REVERSE LENGTH=330
Length = 330
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 22/165 (13%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
M+ +C+ C +A + C +D A LC +CD VH+AN L+ +H R L C+ C
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL---------CEKC 51
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQRFLLTGV----------RVGLEATE 110
C+ + LC+ C + +N GH+ L ++ E
Sbjct: 52 SLQPTAVHCMNENVSLCQGCQWT--ASNCTGLGHRLQSLNPYSDCPSPSDFGKIWSSTLE 109
Query: 111 PGASS-TSLKSDSGEKNSDTKSSSVSRKVSAMLQSSDYNEVLPTE 154
P +S S SD+ + D + S + V+ DY+ P E
Sbjct: 110 PSVTSLVSPFSDTLLQELDDWNGSSTSVVTQTQNLKDYSSFFPME 154
>AT3G21880.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr3:7706748-7708093 FORWARD LENGTH=364
Length = 364
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 1 MKIQCNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPKCDIC 60
M+ +C+ C ++A + C +D A LC +CD VH+AN L+ +H R + C+ C
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI---------CEKC 51
Query: 61 QEAFGYFFCLEDRALLCRKCDLSIHTANAYVSGHQ 95
CL+++ C+ C H +N GH+
Sbjct: 52 FSQPAAIRCLDEKVSYCQGCHW--HESNCSELGHR 84
>AT1G25440.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:8933939-8935284 REVERSE LENGTH=417
Length = 417
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 5 CNVCEGAEAKVLCCADEAALCWDCDEKVHAANKLASKHQRVPLSLSSSHMPK 56
C+ C A+ C AD+A LC CD VH+AN LA +H+RV L +S + K
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPAVVK 68