Miyakogusa Predicted Gene
- Lj0g3v0111069.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0111069.1 tr|F2EK34|F2EK34_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,29,1e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat; FAMILY,CUFF.6416.1
(336 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 1e-89
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 159 2e-39
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 149 4e-36
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 5e-36
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 6e-35
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 2e-34
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 2e-34
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 141 5e-34
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 8e-34
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 140 1e-33
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 140 2e-33
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 2e-33
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 8e-33
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 137 9e-33
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 2e-32
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 136 2e-32
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 2e-32
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 136 2e-32
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 3e-32
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 3e-32
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 135 5e-32
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 5e-32
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 134 7e-32
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 9e-32
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 1e-31
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 1e-31
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 1e-31
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 132 5e-31
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 5e-31
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 2e-30
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 129 2e-30
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 2e-30
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 129 3e-30
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 129 4e-30
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 6e-30
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 7e-30
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 1e-29
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 8e-29
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 1e-28
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 7e-28
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 9e-28
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 119 2e-27
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 119 3e-27
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 3e-27
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 3e-27
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 5e-27
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 5e-27
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 5e-27
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 9e-27
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 9e-27
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 9e-27
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 117 1e-26
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 117 1e-26
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 4e-26
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 5e-26
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 115 6e-26
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 7e-26
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 8e-26
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 114 1e-25
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 1e-25
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 111 6e-25
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 111 7e-25
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 9e-25
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 110 1e-24
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 109 2e-24
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 3e-24
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 108 4e-24
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 4e-24
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 9e-24
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 1e-23
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 107 1e-23
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 3e-23
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 3e-23
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 105 6e-23
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 8e-23
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 9e-23
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 102 3e-22
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 100 2e-21
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 6e-21
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 7e-21
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 98 7e-21
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 5e-20
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 6e-20
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 92 6e-19
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 9e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 89 4e-18
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 88 1e-17
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 86 3e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 4e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 9e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 77 1e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 5e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 73 3e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 71 9e-13
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 9e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 70 2e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 69 6e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 2e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 62 4e-10
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 62 4e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 62 6e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 61 1e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 60 2e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 59 3e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 59 4e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 5e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 5e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 58 7e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 1e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 55 5e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 55 8e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 55 9e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 54 1e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 53 3e-07
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 52 7e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 6e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/314 (55%), Positives = 223/314 (71%), Gaps = 8/314 (2%)
Query: 18 ITHQVVSCRYIT-KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLT 76
+ H ++S R I + H+ ++L TK N++ + + +D + A +FDEI +L
Sbjct: 1 MLHMILSQRVILLRKYHSSANALVTKSPNSIPE---LVKHIDSDLIRNAHKVFDEIPELD 57
Query: 77 GESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHA 136
SAT +I F K H +A F R+L IRPNEFTFGTV+ SST R+V +G+QLH
Sbjct: 58 VISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHC 117
Query: 137 CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFED 196
A K+GLASNVFVGSA+L+ YVKLST+ +A++ F DT+ PNVVS T L+ GYLK+ FE+
Sbjct: 118 YALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEE 177
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG-FIPTESTFPSVITAAA 255
AL +F MPER+VV+WNA++GG SQTG NEEAVN F+DMLREG IP ESTFP ITA +
Sbjct: 178 ALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAIS 237
Query: 256 KIAALGMGKRFHACAIKCLGK-LDVFVGNSLISFYAKCGSMEDSLLMFNKL--LKRNIVS 312
IA+ G GK HACAIK LGK +VFV NSLISFY+KCG+MEDSLL FNKL +RNIVS
Sbjct: 238 NIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVS 297
Query: 313 CNAVVCGYAQNGRG 326
N+++ GYA NGRG
Sbjct: 298 WNSMIWGYAHNGRG 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 41 TKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLF 100
T+ N V ++I L F+ A +F + + + + +I GF++ +E+A++ F
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 101 SRMLASKIR-PNEFTFGTVLHSSTVLRNVVIGRQLHACATK-IGLASNVFVGSALLDLYV 158
ML + PNE TF + + + + + G+ +HACA K +G NVFV ++L+ Y
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYS 273
Query: 159 KLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPE--RNVVSWNAMV 216
K CG + ED+L F+++ E RN+VSWN+M+
Sbjct: 274 K--------------------------CGNM-----EDSLLAFNKLEEEQRNIVSWNSMI 302
Query: 217 GGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITA 253
G + G EEAV F M+++ P T V+ A
Sbjct: 303 WGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 157/269 (58%), Gaps = 7/269 (2%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDE+ D S ++I F + +A+ +F ML S++ P+E T +V+ +
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACAS 265
Query: 125 LRNVVIGRQLHACATKIG-LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
L + +G+++H K L +++ + +A +D+Y K S I+EA+ F NV++ T+
Sbjct: 266 LSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
++ GY + A +F +M ERNVVSWNA++ G +Q G NEEA++ F + RE PT
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKL------DVFVGNSLISFYAKCGSMED 297
+F +++ A A +A L +G + H +K K D+FVGNSLI Y KCG +E+
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 298 SLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
L+F K+++R+ VS NA++ G+AQNG G
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 117/193 (60%)
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKR 191
R +HA K G ++ +F+ + L+D Y K ++E+ ++ F N+ ++ ++V G K
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 192 GRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
G ++A +F MPER+ +WN+MV G +Q EEA+ +F M +EGF+ E +F SV+
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 252 TAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
+A + + + G + H+ K DV++G++L+ Y+KCG++ D+ +F+++ RN+V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 312 SCNAVVCGYAQNG 324
S N+++ + QNG
Sbjct: 220 SWNSLITCFEQNG 232
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 65/278 (23%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+++ GFA+ E+A+ F+ M NE++F +VL + + L ++ G Q+H+ K
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
S+V++GSAL+D+Y K + +AQ+ F + NVVS+ +L+ + + G +AL V
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F M E V P E T SVI+A A ++A+
Sbjct: 241 FQMMLESRVE-------------------------------PDEVTLASVISACASLSAI 269
Query: 261 GMGKRFHACAIKCLGKL--DVFVGNSLISFYAKCGSME------DSL------------- 299
+G+ H +K KL D+ + N+ + YAKC ++ DS+
Sbjct: 270 KVGQEVHGRVVKN-DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 300 ------------LMFNKLLKRNIVSCNAVVCGYAQNGR 325
LMF K+ +RN+VS NA++ GY QNG
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 39/238 (16%)
Query: 45 NTVVQKDIIP-YGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM 103
N + + +I Y + +T + A MF ++++ S +I G+ + +E+A+ LF +
Sbjct: 319 NVIAETSMISGYAMAAST-KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 104 LASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGL------ASNVFVGSALLDLY 157
+ P ++F +L + L + +G Q H K G ++FVG++L+D+Y
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 158 VKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVG 217
VK +EE GYL VF +M ER+ VSWNAM+
Sbjct: 438 VKCGCVEE---------------------GYL----------VFRKMMERDCVSWNAMII 466
Query: 218 GCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG 275
G +Q G+ EA+ F +ML G P T V++A + G+ + + + G
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFG 524
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 139/225 (61%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A+ L+ M++ + PN +TF VL S + G+Q+H K+G +++V ++L+
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 177
Query: 156 LYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAM 215
+YV+ +E+A K F + H +VVSYTAL+ GY RG E+A ++F E+P ++VVSWNAM
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAM 237
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG 275
+ G ++TG+ +EA+ F DM++ P EST +V++A A+ ++ +G++ H
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297
Query: 276 KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
++ + N+LI Y+KCG +E + +F +L ++++S N ++ GY
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 134/264 (50%), Gaps = 33/264 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDEI S +I G+A+ +++A+ LF M+ + +RP+E T TV+ +
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
++ +GRQ+H G SN+ + +AL+DLY K +E A
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA------------------ 320
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
CG +F +P ++V+SWN ++GG + +EA+ F +MLR G P +
Sbjct: 321 -CG------------LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 367
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLD--VFVGNSLISFYAKCGSMEDSLLMF 302
T S++ A A + A+ +G+ H K L + + SLI YAKCG +E + +F
Sbjct: 368 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 427
Query: 303 NKLLKRNIVSCNAVVCGYAQNGRG 326
N +L +++ S NA++ G+A +GR
Sbjct: 428 NSILHKSLSSWNAMIFGFAMHGRA 451
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 71/128 (55%)
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A+ VF + E N++ WN M G + + A+ ++ M+ G +P TFP V+ + AK
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
A G++ H +K LD++V SLIS Y + G +ED+ +F+K R++VS A+
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 317 VCGYAQNG 324
+ GYA G
Sbjct: 207 IKGYASRG 214
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 33/205 (16%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+ AC +F+ + S T+I G+ + +++A+ LF ML S PN+ T ++L +
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 122 STVLRNVVIGRQLHACATK--IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
L + IGR +H K G+ + + ++L+D+Y K IE A
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH------------ 424
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG 239
QVF+ + +++ SWNAM+ G + G + + + F M + G
Sbjct: 425 -------------------QVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 240 FIPTESTFPSVITAAAKIAALGMGK 264
P + TF +++A + L +G+
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGR 490
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 145/263 (55%), Gaps = 14/263 (5%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDE+ S II + + + LF ML S+I P+EFTFG++L + T
Sbjct: 436 AFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG 495
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDT-QHPNVVSYTA 183
++ G ++H+ K G+ASN VG +L+D+Y K IEEA+K Q NV
Sbjct: 496 -GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV----- 549
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
G E+ ++ ++ + VSWN+++ G +E+A F M+ G P
Sbjct: 550 -------SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
+ T+ +V+ A +A+ G+GK+ HA IK + DV++ ++L+ Y+KCG + DS LMF
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE 662
Query: 304 KLLKRNIVSCNAVVCGYAQNGRG 326
K L+R+ V+ NA++CGYA +G+G
Sbjct: 663 KSLRRDFVTWNAMICGYAHHGKG 685
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 31/248 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +++ G+ + +I +F M I + TF +L + L + +G Q+H
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
++G ++V SALLD+Y K RF ++L
Sbjct: 207 VRVGCDTDVVAASALLDMYA-------------------------------KGKRFVESL 235
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
+VF +PE+N VSW+A++ GC Q A+ FF +M + ++S + SV+ + A ++
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
L +G + HA A+K D V + + YAKC +M+D+ ++F+ N S NA++
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 319 GYAQNGRG 326
GY+Q G
Sbjct: 356 GYSQEEHG 363
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 31/265 (11%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F + +F I + S + II G + + A+ F M ++ + +VL S
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L + +G QLHA A K A++ V +A LD+Y K +++AQ F ++++ N SY
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
A++ GY SQ H +A+ F ++ G
Sbjct: 351 NAMITGY-------------------------------SQEEHGFKALLLFHRLMSSGLG 379
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
E + V A A + L G + + AIK LDV V N+ I Y KC ++ ++ +
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 439
Query: 302 FNKLLKRNIVSCNAVVCGYAQNGRG 326
F+++ +R+ VS NA++ + QNG+G
Sbjct: 440 FDEMRRRDAVSWNAIIAAHEQNGKG 464
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 57/301 (18%)
Query: 61 TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
Q A +FD +L +S +I G+++ A+ LF R+++S + +E + V
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
+ +++ + G Q++ A K L+ +V V +A +D+Y K + EA
Sbjct: 391 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA-------------- 436
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+VF EM R+ VSWNA++ Q G E + F+ MLR
Sbjct: 437 -----------------FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKC-------- 292
P E TF S++ A +LG G H+ +K + VG SLI Y+KC
Sbjct: 480 EPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Query: 293 ------------GSMEDSLLMFNKLLKRNIVSCNAVVCGY-----AQNGRGGFTSWATLG 335
G+ME+ M NK L+ VS N+++ GY +++ + FT +G
Sbjct: 539 IHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG 598
Query: 336 L 336
+
Sbjct: 599 I 599
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +II G+ + EDA LF+RM+ I P++FT+ TVL + L + +G+Q+HA
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 629
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K L S+V++ S L+D+Y K + +++ F + + V++ A++CGY G+ E+A+
Sbjct: 630 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAI 689
Query: 199 QVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITA 253
Q+F M N+ V++ +++ C+ G ++ + +F M R+ G P + +++
Sbjct: 690 QLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDI 749
Query: 254 AAK 256
K
Sbjct: 750 LGK 752
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%)
Query: 130 IGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYL 189
+G+Q HA G FV + LL +Y A F +VVS+ ++ GY
Sbjct: 66 LGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYS 125
Query: 190 KRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
K A F+ MP R+VVSWN+M+ G Q G + +++ F+DM REG TF
Sbjct: 126 KSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI 185
Query: 250 VITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRN 309
++ + + +G + H ++ DV ++L+ YAK +SL +F + ++N
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 245
Query: 310 IVSCNAVVCGYAQN 323
VS +A++ G QN
Sbjct: 246 SVSWSAIIAGCVQN 259
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 138/271 (50%), Gaps = 31/271 (11%)
Query: 61 TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
+ + A +F+++ + TT+I G+++ DA+ F++ML PNEFT +V+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
++ R G QLH K G SNV VGSALLDLY +
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY-------------------- 209
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
G +DA VF + RN VSWNA++ G ++ E+A+ F MLR+GF
Sbjct: 210 -----------GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
P+ ++ S+ A + L GK HA IK KL F GN+L+ YAK GS+ D+
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNGRGGFTSW 331
+F++L KR++VS N+++ YAQ+G G W
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 31/218 (14%)
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
S I + + T+L TV + ++ GR +HA + ++ +G+ LL++Y K
Sbjct: 53 GSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAK----- 107
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
CG L E+A +VF +MP+R+ V+W ++ G SQ
Sbjct: 108 ---------------------CGSL-----EEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNS 284
+A+ FF MLR G+ P E T SVI AAA G + H +KC +V VG++
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 285 LISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
L+ Y + G M+D+ L+F+ L RN VS NA++ G+A+
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 31/205 (15%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD + S +I G A+R E A+ LF ML RP+ F++ ++ + +
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ G+ +HA K G F G+ LLD+Y K +I +A+K
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK------------------- 318
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
+F + +R+VVSWN+++ +Q G +EAV +F +M R G P E +F
Sbjct: 319 ------------IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 248 PSVITAAAKIAALGMGKRFHACAIK 272
SV+TA + L G ++ K
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKK 391
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 236 LREGFIPTESTFPSVITAAAKIAALGM-GKRFHACAIKCLGKLDVFVGNSLISFYAKCGS 294
L +IP + F + + + L + G+ HA ++ + + D+ +GN+L++ YAKCGS
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 295 MEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+E++ +F K+ +R+ V+ ++ GY+Q+ R
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 159/299 (53%), Gaps = 5/299 (1%)
Query: 29 TKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFA 88
T + + + + N V ++ ++ F+ A +F E+ + +I G A
Sbjct: 121 TLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHA 180
Query: 89 KRHCH--EDAIHLFSRMLASKIRPNEFTFGTVLHS-STVLRNVVIGRQLHACATKIGLAS 145
HC E + LF ML S+ +P+ +TF +++++ S NVV GR +HA K G +S
Sbjct: 181 --HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSS 238
Query: 146 NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
V +++L Y KL + ++A + + VS+ +++ +K G E AL+VFH P
Sbjct: 239 AVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAP 298
Query: 206 ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
E+N+V+W M+ G + G E+A+ FF++M++ G + +V+ A + +A LG GK
Sbjct: 299 EKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKM 358
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
H C I C + +VGN+L++ YAKCG ++++ F + +++VS N ++ + +G
Sbjct: 359 IHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHG 417
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 34/296 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD + +L + T++ +++ H++AI LF+++ S +P++++F +L +
Sbjct: 23 ARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCAS 82
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDT--QHPNVVSYT 182
L NV GR++ + + G +++ V ++L+D+Y K S A K F D N V++
Sbjct: 83 LGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWC 142
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
+L+ Y+ +FE AL VF EMP+R +WN M+ G + G E ++ F +ML F P
Sbjct: 143 SLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKP 202
Query: 243 TESTFPSVITA-AAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMED---- 297
TF S++ A +A + + G+ HA +K V NS++SFY K GS +D
Sbjct: 203 DCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRE 262
Query: 298 ---------------------------SLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+L +F+ ++NIV+ ++ GY +NG G
Sbjct: 263 LESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDG 318
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 4/168 (2%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TT+I G+ + E A+ F M+ S + + F +G VLH+ + L + G+ +H C
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G +VG+AL++LY K I+EA +AFGD + ++VS+ ++ + G + AL++
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 201 FHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+ M + V++ ++ CS +G EE F M+++ IP E
Sbjct: 426 YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLE 473
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 178 VVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
+V T+ + K GR A QVF MPE + V+WN M+ S+ G ++EA+ F +
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKC 292
P + +F ++++ A + + G++ + I+ + V NSLI Y KC
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKC 118
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 135/232 (58%), Gaps = 5/232 (2%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
+ A L+ ++L+S+I PNEFTF ++L S + G+ +H K GL + +V + L
Sbjct: 112 DQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGL 167
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
+D+Y K + AQK F ++VS TA++ Y K+G E A +F M ER++VSWN
Sbjct: 168 VDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWN 227
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIAALGMGKRFHACAIK 272
M+ G +Q G +A+ F +L EG P E T + ++A ++I AL G+ H
Sbjct: 228 VMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKS 287
Query: 273 CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+L+V V LI Y+KCGS+E+++L+FN +++IV+ NA++ GYA +G
Sbjct: 288 SRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHS 121
+ A +FD + + S +I G+A+ DA+ LF ++LA K +P+E T L +
Sbjct: 209 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 268
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ + + GR +H + NV V + L+D+Y K ++EEA F DT ++V++
Sbjct: 269 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 328
Query: 182 TALVCGYLKRGRFEDALQVFHEMP-----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
A++ GY G +DAL++F+EM + +++ + C+ G E + F M
Sbjct: 329 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 388
Query: 237 RE-GFIP 242
+E G P
Sbjct: 389 QEYGIKP 395
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 144/271 (53%), Gaps = 14/271 (5%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSSTVLR 126
+FDE+S S +II +AK + A+ +FSRM RP+ T VL L
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+G+QLH A + N+FVG+ L+D+Y K ++EA F + +VVS+ A+V
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 187 GYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
GY + GRFEDA+++F +M E +VV+W+A + G +Q G EA+ ML G P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKL-------DVFVGNSLISFYAKCGSM 295
E T SV++ A + AL GK H AIK L + V N LI YAKC +
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 296 EDSLLMFNKL--LKRNIVSCNAVVCGYAQNG 324
+ + MF+ L +R++V+ ++ GY+Q+G
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 135/279 (48%), Gaps = 43/279 (15%)
Query: 62 FQVACHMFDEISD----LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
F+ A +F+++ + + + + I G+A+R +A+ + +ML+S I+PNE T +
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 118 VLHSSTVLRNVVIGRQLHACATKI-------GLASNVFVGSALLDLYVKLSTIEEAQKAF 170
VL + ++ G+++H A K G V + L+D+Y K ++ A+ F
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMF 430
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVN 230
D+ P ER+VV+W M+GG SQ G +A+
Sbjct: 431 -DSLSPK----------------------------ERDVVTWTVMIGGYSQHGDANKALE 461
Query: 231 FFIDMLREG--FIPTESTFPSVITAAAKIAALGMGKRFHACAIKCL-GKLDVFVGNSLIS 287
+M E P T + A A +AAL +GK+ HA A++ + +FV N LI
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLID 521
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
YAKCGS+ D+ L+F+ ++ +N V+ +++ GY +G G
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYG 560
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 32/246 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
++I + C ++LF M + P+ +TF V + + +V G HA +
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G SNVFVG+AL+ +Y + ++ +A+K V
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARK-------------------------------V 184
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITAAAKIAA 259
F EM +VVSWN+++ ++ G + A+ F M E G P T +V+ A +
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
+GK+ H A+ ++FVGN L+ YAKCG M+++ +F+ + +++VS NA+V G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 320 YAQNGR 325
Y+Q GR
Sbjct: 305 YSQIGR 310
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 44 ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGE--SATTIICGFAKRHCHEDAIHLFS 101
EN V+ + I Y A MFD +S + + T +I G+++ A+ L S
Sbjct: 406 ENMVINQLIDMYA-KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 102 RMLAS--KIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGL-ASNVFVGSALLDLYV 158
M + RPN FT L + L + IG+Q+HA A + A +FV + L+D+Y
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYA 524
Query: 159 KLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP----ERNVVSWNA 214
K +I +A+ F + N V++T+L+ GY G E+AL +F EM + + V+
Sbjct: 525 KCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLV 584
Query: 215 MVGGCSQTGHNEEAVNFFIDM 235
++ CS +G ++ + +F M
Sbjct: 585 VLYACSHSGMIDQGMEYFNRM 605
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 184 LVCGYLKRGRFEDALQVFHEMPERN--VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
L+ Y+ G A+ + P + V WN+++ G + + F M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P TFP V A +I+++ G+ HA ++ +VFVGN+L++ Y++C S+ D+ +
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 302 FNKLLKRNIVSCNAVVCGYAQNGR 325
F+++ ++VS N+++ YA+ G+
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGK 208
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 137/260 (52%), Gaps = 36/260 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD++ S TT+I ++K H+ A+ L ML +RPN +T+ +VL S
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ +V R LH K GL S+VFV SAL+D++ KL
Sbjct: 175 MSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL------------------------ 207
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
G EDAL VF EM + + WN+++GG +Q ++ A+ F M R GFI +
Sbjct: 208 -------GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
+T SV+ A +A L +G + H +K D+ + N+L+ Y KCGS+ED+L +FN+
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 305 LLKRNIVSCNAVVCGYAQNG 324
+ +R++++ + ++ G AQNG
Sbjct: 319 MKERDVITWSTMISGLAQNG 338
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 175 HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFID 234
P + L+ Y+K DA Q+F +MP+RNV+SW M+ S+ +++A+ +
Sbjct: 93 RPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVL 152
Query: 235 MLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGS 294
MLR+ P T+ SV+ + ++ + M H IK + DVFV ++LI +AK G
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 295 MEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
ED+L +F++++ + + N+++ G+AQN R
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 40/245 (16%)
Query: 65 ACHMFDEISDLTGESA--TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
A +FDE+ +TG++ +II GFA+ + A+ LF RM + + T +VL +
Sbjct: 213 ALSVFDEM--VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
T L + +G Q H K ++ + +AL+D+Y K
Sbjct: 271 TGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCK----------------------- 305
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
CG L EDAL+VF++M ER+V++W+ M+ G +Q G+++EA+ F M G P
Sbjct: 306 ---CGSL-----EDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKP 357
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN--SLISFYAKCGSMEDSLL 300
T V+ A + L G ++ ++K L +D + +I K G ++D++
Sbjct: 358 NYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 301 MFNKL 305
+ N++
Sbjct: 417 LLNEM 421
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 146/299 (48%), Gaps = 37/299 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDEI + +I + + + + +F M +RP+ +TF VL + +
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+VIGR++H ATK+GL+S +FVG+ L+ +Y K + EA+ + +VVS+ +L
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 185 VCGYLKRGRFEDALQV-------------------------------------FHEMPER 207
V GY + RF+DAL+V F +M ++
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 272
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFH 267
++VSWN M+G + EAV + M +GF P + SV+ A +AL +GK+ H
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 268 ACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+ ++ + N+LI YAKCG +E + +F + R++VS A++ Y +GRG
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRG 391
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 147 VFVGSALLDLYVKLSTIEEAQ-KAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
VF+ +LD Y + T+ + + N L+ Y A +VF E+P
Sbjct: 42 VFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP 101
Query: 206 ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
ERNV+ N M+ G E V F M P TFP V+ A + + +G++
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
H A K +FVGN L+S Y KCG + ++ L+ +++ +R++VS N++V GYAQN R
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
MF ++ + S +I + K +A+ L+SRM A P+ + +VL +
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ +G+++H + L N+ + +AL+D+Y K +E+A+ F + + +VVS+TA++
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 188 YLKRGRFEDALQVFHEMPERNVV----SWNAMVGGCSQTGHNEEAVNFF 232
Y GR DA+ +F ++ + +V ++ + CS G EE + F
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 433
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 140/258 (54%), Gaps = 2/258 (0%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSSTVLRN 127
F+++ D G + +I G++ A+ ++ M+ T T+L S+ +
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
V +G+Q+H K+G S + VGS LL +Y + I +A+K F N V Y +L+ G
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
L G EDALQ+F M E++ VSW AM+ G +Q G +EA+ F +M +G + F
Sbjct: 215 LLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
SV+ A + A+ GK+ HAC I+ + ++VG++LI Y KC + + +F+++ +
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 308 RNIVSCNAVVCGYAQNGR 325
+N+VS A+V GY Q GR
Sbjct: 334 KNVVSWTAMVVGYGQTGR 351
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 131/268 (48%), Gaps = 37/268 (13%)
Query: 64 VACHMFDEISDL------TGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
+AC M ++ L S +I G A+ ++AI F M ++ +++ FG+
Sbjct: 216 LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN 177
VL + L + G+Q+HAC + +++VGSAL+D+Y K + A+
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK---------- 325
Query: 178 VVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
VF M ++NVVSW AMV G QTG EEAV F+DM R
Sbjct: 326 ---------------------TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMED 297
G P T I+A A +++L G +FH AI V V NSL++ Y KCG ++D
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 298 SLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
S +FN++ R+ VS A+V YAQ GR
Sbjct: 425 STRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD + S T ++ G+ + E+A+ +F M S I P+ +T G + + + +
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ G Q H A GL V V ++L+ LY K
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC--------------------------- 419
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
G +D+ ++F+EM R+ VSW AMV +Q G E + F M++ G P T
Sbjct: 420 ----GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNS-LISFYAKCGSMEDSLLMFNKL 305
VI+A ++ + G+R+ G + S +I +++ G +E+++ N +
Sbjct: 476 TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 148 FVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER 207
F+ + ++ Y + + A++ F PN+ S+ L+ Y K G + F ++P+R
Sbjct: 42 FLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR 101
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITAAAKIAALGMGKRF 266
+ V+WN ++ G S +G AV + M+R+ T T +++ ++ + +GK+
Sbjct: 102 DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQI 161
Query: 267 HACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
H IK + + VG+ L+ YA G + D+ +F L RN V N+++ G
Sbjct: 162 HGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 131/235 (55%), Gaps = 1/235 (0%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
+++ FS M + I +E+T+ +L S + L ++ G+ +H + G + ++
Sbjct: 85 ESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVV 144
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNA 214
+LY + +AQK F + NVV + ++ G+ G E L +F +M ER++VSWN+
Sbjct: 145 ELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNS 204
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC- 273
M+ S+ G + EA+ F +M+ +GF P E+T +V+ +A + L GK H+ A
Sbjct: 205 MISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSG 264
Query: 274 LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGF 328
L K + VGN+L+ FY K G +E + +F K+ +RN+VS N ++ G A NG+G F
Sbjct: 265 LFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEF 319
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 40/281 (14%)
Query: 43 HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSR 102
N VV +I D + H+F ++S+ + S ++I +K +A+ LF
Sbjct: 165 ERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 103 MLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN-VFVGSALLDLYVKLS 161
M+ P+E T TVL S L + G+ +H+ A GL + + VG+AL+D Y K
Sbjct: 225 MIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCK-- 282
Query: 162 TIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQ 221
G E A +F +M RNVVSWN ++ G +
Sbjct: 283 -----------------------------SGDLEAATAIFRKMQRRNVVSWNTLISGSAV 313
Query: 222 TGHNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVF 280
G E ++ F M+ EG + P E+TF V+ + + G+ ++ KL+
Sbjct: 314 NGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERF-KLEAR 372
Query: 281 VGN--SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
+ +++ ++ G + ++ K LK V+ NA + G
Sbjct: 373 TEHYGAMVDLMSRSGRITEAF----KFLKNMPVNANAAMWG 409
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+CG L + A +VF + NV+ +NAM+ S G E+++FF M G E
Sbjct: 45 ICGSLSNSDY--ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADE 102
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKC----LGKLDVFVGNSLISFYAKCGSMEDSLL 300
T+ ++ + + ++ L GK H I+ LGK+ + V + Y G M D+
Sbjct: 103 YTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGV----VELYTSGGRMGDAQK 158
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG 324
+F+++ +RN+V N ++ G+ +G
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSG 182
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 129/261 (49%), Gaps = 35/261 (13%)
Query: 100 FSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVK 159
F + ++I PN+FTF VL + NV GRQ+H K+GL N + G AL+D+Y K
Sbjct: 148 FVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAK 207
Query: 160 LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRG--------------------------- 192
I +A++ F PN V +T L GY+K G
Sbjct: 208 CDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV 267
Query: 193 --------RFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+ +DA +F EM +VV+WN M+ G + G A+ +F +M + T
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
ST SV++A +A L +G HA AIK +++VG+SL+S Y+KC ME + +F
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 305 LLKRNIVSCNAVVCGYAQNGR 325
L ++N V NA++ GYA NG
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGE 408
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 131/256 (51%), Gaps = 31/256 (12%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F E+S + +I G KR C AI F M S ++ T G+VL + ++ N
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ +G +HA A K+GLASN++VGS+L+ +Y K +E A K
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAK------------------- 383
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
VF + E+N V WNAM+ G + G + + + F+DM G+ + TF
Sbjct: 384 ------------VFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
S+++ A L MG +FH+ IK ++FVGN+L+ YAKCG++ED+ +F ++
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 308 RNIVSCNAVVCGYAQN 323
R+ V+ N ++ Y Q+
Sbjct: 492 RDNVTWNTIIGSYVQD 507
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 127/262 (48%), Gaps = 31/262 (11%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+ A +F+ + + +I G+A + LF M +S ++FTF ++L +
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
++ +G Q H+ K LA N+FVG+AL+D+Y K
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK---------------------- 475
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
CG L EDA Q+F M +R+ V+WN ++G Q + EA + F M G +
Sbjct: 476 ----CGAL-----EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
+ S + A + L GK+ H ++KC D+ G+SLI Y+KCG ++D+ +
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Query: 302 FNKLLKRNIVSCNAVVCGYAQN 323
F+ L + ++VS NA++ GY+QN
Sbjct: 587 FSSLPEWSVVSMNALIAGYSQN 608
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 134/263 (50%), Gaps = 35/263 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +F + + + S +I G+++ + E+A+ LF ML + P+E TF T++ +
Sbjct: 583 ARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHK 641
Query: 125 LRNVVIGRQLHACATKIGLASN-VFVGSALLDLYVKLSTIEEAQKAFGDTQHP-NVVSYT 182
++ +G Q H TK G +S ++G +LL +Y+ + EA F + P ++V +T
Sbjct: 642 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWT 701
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
++ G+ + G +E+AL+ F+ +M +G +P
Sbjct: 702 GMMSGHSQNGFYEEALK-------------------------------FYKEMRHDGVLP 730
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
++TF +V+ + +++L G+ H+ LD N+LI YAKCG M+ S +F
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 303 NKLLKR-NIVSCNAVVCGYAQNG 324
+++ +R N+VS N+++ GYA+NG
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNG 813
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 136/296 (45%), Gaps = 37/296 (12%)
Query: 34 THYHSLATKHE---NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKR 90
+ +HS+ K + N V ++ + A +F+ + D + TII + +
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 91 HCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVG 150
+A LF RM I + + L + T + + G+Q+H + K GL ++ G
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG 567
Query: 151 SALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVV 210
S+L+D+Y K CG +K DA +VF +PE +VV
Sbjct: 568 SSLIDMYSK--------------------------CGIIK-----DARKVFSSLPEWSVV 596
Query: 211 SWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACA 270
S NA++ G SQ + EEAV F +ML G P+E TF +++ A K +L +G +FH
Sbjct: 597 SMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 271 IK-CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK-RNIVSCNAVVCGYAQNG 324
K ++G SL+ Y M ++ +F++L ++IV ++ G++QNG
Sbjct: 656 TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 37/251 (14%)
Query: 31 TVHTHYHSLATKH----ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESA-TTIIC 85
T+ T +H TK E + ++ ++ AC +F E+S T ++
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Query: 86 GFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLAS 145
G ++ +E+A+ + M + P++ TF TVL +VL ++ GR +H+ +
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765
Query: 146 NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
+ + L+D+Y K CG +K + QVF EM
Sbjct: 766 DELTSNTLIDMYAK--------------------------CGDMK-----GSSQVFDEMR 794
Query: 206 ER-NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
R NVVSWN+++ G ++ G+ E+A+ F M + +P E TF V+TA + + G+
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 854
Query: 265 RFHACAIKCLG 275
+ I G
Sbjct: 855 KIFEMMIGQYG 865
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 32/195 (16%)
Query: 130 IGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYL 189
IG+ +H+ + +G+ S +G+A++DLY K + + A+K F
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF------------------- 118
Query: 190 KRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
+ E++V +WN+M+ S G + + F+ + P + TF
Sbjct: 119 -------------DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSI 165
Query: 250 VITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRN 309
V++ A+ + G++ H IK + + + G +L+ YAKC + D+ +F ++ N
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 310 IVSCNAVVCGYAQNG 324
V + GY + G
Sbjct: 226 TVCWTCLFSGYVKAG 240
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 136/257 (52%), Gaps = 31/257 (12%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD +S+ + T+II A+ E+AI LF M + N T ++L + +
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGA 400
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+++G++LHA K + NV++GS L+ LY K CG
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCK--------------------------CG 434
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
+ DA V ++P R+VVSW AM+ GCS GH EA++F +M++EG P T+
Sbjct: 435 ESR-----DAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTY 489
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
S + A A +L +G+ H+ A K +VFVG++LI YAKCG + ++ +F+ + +
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549
Query: 308 RNIVSCNAVVCGYAQNG 324
+N+VS A++ GYA+NG
Sbjct: 550 KNLVSWKAMIMGYARNG 566
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 33/263 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIR-PNEFTFGTVLHSST 123
A +FD + + + T +I G+ K ++A LF + IR NE F +L+ +
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCS 195
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
+GRQ+H K+G+ N+ V S+L+ Y +
Sbjct: 196 RRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQ------------------------ 230
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
CG L AL+ F M E++V+SW A++ CS+ GH +A+ FI ML F+P
Sbjct: 231 --CGELT-----SALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPN 283
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
E T S++ A ++ AL G++ H+ +K + K DVFVG SL+ YAKCG + D +F+
Sbjct: 284 EFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD 343
Query: 304 KLLKRNIVSCNAVVCGYAQNGRG 326
+ RN V+ +++ +A+ G G
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFG 366
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 31/280 (11%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
N +V+ ++ + A FD + + S T +I +++ AI +F ML
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
PNEFT ++L + + + + GRQ+H+ K + ++VFVG++L+D+Y K
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC---- 332
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
G D +VF M RN V+W +++ ++ G
Sbjct: 333 ---------------------------GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNS 284
EEA++ F M R I T S++ A + AL +GK HA IK + +V++G++
Sbjct: 366 GEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST 425
Query: 285 LISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
L+ Y KCG D+ + +L R++VS A++ G + G
Sbjct: 426 LVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLG 465
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T +I G + +A+ M+ + PN FT+ + L + +++IGR +H+ A
Sbjct: 453 SWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIA 512
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K SNVFVGSAL+ +Y K + EA + F N+VS+ A++ GY + G +AL
Sbjct: 513 KKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREAL 572
Query: 199 QVFHEM 204
++ + M
Sbjct: 573 KLMYRM 578
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 142/276 (51%), Gaps = 9/276 (3%)
Query: 51 DIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRP 110
D +PY Q+ FD +I GF+ E ++ L+ RML S
Sbjct: 63 DFLPYA------QIVFDGFDRPDTFLW---NLMIRGFSCSDEPERSLLLYQRMLCSSAPH 113
Query: 111 NEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF 170
N +TF ++L + + L Q+HA TK+G ++V+ ++L++ Y + A F
Sbjct: 114 NAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLF 173
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVN 230
P+ VS+ +++ GY+K G+ + AL +F +M E+N +SW M+ G Q N+EA+
Sbjct: 174 DRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQ 233
Query: 231 FFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYA 290
F +M P + + ++A A++ AL GK H+ K ++D +G LI YA
Sbjct: 234 LFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYA 293
Query: 291 KCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
KCG ME++L +F + K+++ + A++ GYA +G G
Sbjct: 294 KCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+A +F ++++ S TT+I G+ + +++A+ LF M S + P+ + L +
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L + G+ +H+ K + + +G L+D+Y K +EEA + F + + +V ++
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAW 316
Query: 182 TALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
TAL+ GY G +A+ F EM + NV+++ A++ CS TG EE F M R
Sbjct: 317 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 376
Query: 238 E-GFIPTESTFPSVITAAAKIAALGMGKRF 266
+ PT + ++ + L KRF
Sbjct: 377 DYNLKPTIEHYGCIVDLLGRAGLLDEAKRF 406
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 138/262 (52%), Gaps = 31/262 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
AC MFD D + + ++ G+++ +A+ LFSRM ++ I+P+E+T VL++ +
Sbjct: 275 ACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD 334
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ + G+QLH+ K+G ++F +AL+D+Y K
Sbjct: 335 ICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK------------------------- 369
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
G DA + F + ER+V W +++ G Q NEEA+ + M G IP +
Sbjct: 370 ------AGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T SV+ A + +A L +GK+ H IK L+V +G++L + Y+KCGS+ED L+F +
Sbjct: 424 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRR 483
Query: 305 LLKRNIVSCNAVVCGYAQNGRG 326
+++VS NA++ G + NG+G
Sbjct: 484 TPNKDVVSWNAMISGLSHNGQG 505
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 117/232 (50%), Gaps = 35/232 (15%)
Query: 97 IHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDL 156
+ LF M A I PN +T + + + L++ +GRQ HA K+ S+ D+
Sbjct: 103 MQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM---------SSFGDI 153
Query: 157 YVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMV 216
YV T+LV Y K G ED L+VF MPERN +W+ MV
Sbjct: 154 YVD----------------------TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 217 GGCSQTGHNEEAVNFFIDMLREGFIPTES--TFPSVITAAAKIAALGMGKRFHACAIKCL 274
G + G EEA+ F LRE ++S F +V+++ A +G+G++ H IK
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKN- 250
Query: 275 GKLD-VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
G L V + N+L++ Y+KC S+ ++ MF+ RN ++ +A+V GY+QNG
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 33/245 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIR--PNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
+T++ G+A R E+AI +F+ L K +++ F VL S V +GRQ+H
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K GL V + +AL+ +Y K ++ EA K F +
Sbjct: 248 IKNGLLGFVALSNALVTMYSKCESLNEACKMFDSS------------------------- 282
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
+RN ++W+AMV G SQ G + EAV F M G P+E T V+ A + I
Sbjct: 283 ------GDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDIC 336
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
L GK+ H+ +K + +F +L+ YAK G + D+ F+ L +R++ +++
Sbjct: 337 YLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLIS 396
Query: 319 GYAQN 323
GY QN
Sbjct: 397 GYVQN 401
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 7/192 (3%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T++I G+ + +E+A+ L+ RM + I PN+ T +VL + + L + +G+Q+H K
Sbjct: 392 TSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK 451
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G V +GSAL +Y K ++E+ F T + +VVS+ A++ G G+ ++AL++
Sbjct: 452 HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALEL 511
Query: 201 FHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE--GFIPTESTFPSVITAA 254
F EM E + V++ ++ CS G E F+ +M+ + G P + ++
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERGW-FYFNMMSDQIGLDPKVDHYACMVDLL 570
Query: 255 AKIAALGMGKRF 266
++ L K F
Sbjct: 571 SRAGQLKEAKEF 582
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 43/230 (18%)
Query: 108 IRPNEFTFGTVLHSSTVL---------RNVVIGRQLHACATKIGLASNVFVGSALLDLYV 158
+ P+ F H+ST+L RN+V GR +H + G ++ +
Sbjct: 1 MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCI----------- 49
Query: 159 KLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGG 218
QH NV LV Y K G+ A +F+ + ++VVSWN+++ G
Sbjct: 50 ---------------QHANV-----LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 219 CSQTG---HNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG 275
SQ G + + F +M + +P T + A + + + +G++ HA +K
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149
Query: 276 KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
D++V SL+ Y K G +ED L +F + +RN + + +V GYA GR
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGR 199
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 156/291 (53%), Gaps = 13/291 (4%)
Query: 44 ENTVVQKDIIPYGLDPTT-FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSR 102
EN VV ++ G + A FD + + + S ++ G+A+ EDA+ LF+
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 103 MLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLST 162
ML +RPNE T+ V+ + + + + R L + + N FV +ALLD++ K
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD 314
Query: 163 IEEAQKAFGD--TQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCS 220
I+ A++ F + TQ N+V++ A++ GY + G A Q+F MP+RNVVSWN+++ G +
Sbjct: 315 IQSARRIFNELGTQR-NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 221 QTGHNEEAVNFFIDMLREG-FIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDV 279
G A+ FF DM+ G P E T SV++A +A L +G C + + K +
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD----CIVDYIRKNQI 429
Query: 280 FVGN----SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+ + SLI YA+ G++ ++ +F+++ +R++VS N + +A NG G
Sbjct: 430 KLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDG 480
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 135/270 (50%), Gaps = 37/270 (13%)
Query: 87 FAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN 146
F+K D + L+ + I P+ F+F V+ S+ G A K+G +
Sbjct: 81 FSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILFQALVEKLGFFKD 135
Query: 147 VFVGSALLDLYVKLSTIEEAQKAF---------------------GDTQHP--------- 176
+V + ++D+YVK ++E A+K F G+ +
Sbjct: 136 PYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPE 195
Query: 177 -NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
+VVS+T ++ G+ K E+A + F MPE++VVSWNAM+ G +Q G E+A+ F DM
Sbjct: 196 NDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
Query: 236 LREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSM 295
LR G P E+T+ VI+A + A + + + +L+ FV +L+ +AKC +
Sbjct: 256 LRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDI 315
Query: 296 EDSLLMFNKL-LKRNIVSCNAVVCGYAQNG 324
+ + +FN+L +RN+V+ NA++ GY + G
Sbjct: 316 QSARRIFNELGTQRNLVTWNAMISGYTRIG 345
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 32/202 (15%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLA-SKIRPNEFTFGTVLHSST 123
A +FD + S ++I G+A AI F M+ +P+E T +VL
Sbjct: 350 ARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLS--- 406
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
AC G +++ +G ++D Y++ + I+ N Y +
Sbjct: 407 ------------AC----GHMADLELGDCIVD-YIRKNQIK-----------LNDSGYRS 438
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
L+ Y + G +A +VF EM ER+VVS+N + + G E +N M EG P
Sbjct: 439 LIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPD 498
Query: 244 ESTFPSVITAAAKIAALGMGKR 265
T+ SV+TA + L G+R
Sbjct: 499 RVTYTSVLTACNRAGLLKEGQR 520
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 136/229 (59%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A +++ML S+I P+ TF ++ +S+ + V++G Q H+ + G ++V+V ++L+
Sbjct: 101 AFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVH 160
Query: 156 LYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAM 215
+Y I A + FG +VVS+T++V GY K G E+A ++F EMP RN+ +W+ M
Sbjct: 161 MYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIM 220
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG 275
+ G ++ E+A++ F M REG + E+ SVI++ A + AL G+R + +K
Sbjct: 221 INGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHM 280
Query: 276 KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+++ +G +L+ + +CG +E ++ +F L + + +S ++++ G A +G
Sbjct: 281 TVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHG 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 31/191 (16%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A MFDE+ + + +I G+AK +C E AI LF M + NE +V+ S
Sbjct: 202 AREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAH 261
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L + G + + K + N+ +G+AL+D++ + IE+
Sbjct: 262 LGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEK------------------- 302
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
A+ VF +PE + +SW++++ G + GH +A+++F M+ GFIP +
Sbjct: 303 ------------AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRD 350
Query: 245 STFPSVITAAA 255
TF +V++A +
Sbjct: 351 VTFTAVLSACS 361
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 134 LHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGR 193
+H + L S+VFV S LL L V ST + N++ Y
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPT---------NLLGY------------ 69
Query: 194 FEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA 253
A +F ++ N+ +N ++ S +A F+ ML+ P TFP +I A
Sbjct: 70 ---AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 254 AAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSC 313
++++ + +G++ H+ ++ + DV+V NSL+ YA CG + + +F ++ R++VS
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 314 NAVVCGYAQNG 324
++V GY + G
Sbjct: 187 TSMVAGYCKCG 197
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 164/321 (51%), Gaps = 22/321 (6%)
Query: 25 CRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTT---------------FQVACHMF 69
+YI + H +S A K + DII G P A +F
Sbjct: 34 AKYIAGALQEHINSPAPK-AGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVF 92
Query: 70 DEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS-----TV 124
DE+ T + +I G+ K ++ + L RM S + + +T VL +S T+
Sbjct: 93 DELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTM 152
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ + R +HA K + + + +AL+D YVK +E A+ F + NVV T++
Sbjct: 153 ILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSM 212
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHN-EEAVNFFIDMLREGFIPT 243
+ GY+ +G EDA ++F+ +++V +NAMV G S++G + +V+ +I M R GF P
Sbjct: 213 ISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPN 272
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
STF SVI A + + + +G++ HA +K + +G+SL+ YAKCG + D+ +F+
Sbjct: 273 ISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFD 332
Query: 304 KLLKRNIVSCNAVVCGYAQNG 324
++ ++N+ S +++ GY +NG
Sbjct: 333 QMQEKNVFSWTSMIDGYGKNG 353
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 110/204 (53%), Gaps = 9/204 (4%)
Query: 42 KHENTVVQKDIIPYGLDPTTFQVACHMFD--EISDLTGESATTIICGFAKR-HCHEDAIH 98
K EN V +I ++ + A +F+ ++ D+ +A ++ GF++ + ++
Sbjct: 202 KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNA--MVEGFSRSGETAKRSVD 259
Query: 99 LFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYV 158
++ M + PN TF +V+ + +VL + +G+Q+HA K G+ +++ +GS+LLD+Y
Sbjct: 260 MYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYA 319
Query: 159 KLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP----ERNVVSWNA 214
K I +A++ F Q NV S+T+++ GY K G E+AL++F M E N V++
Sbjct: 320 KCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLG 379
Query: 215 MVGGCSQTGHNEEAVNFFIDMLRE 238
+ CS +G ++ F M R+
Sbjct: 380 ALSACSHSGLVDKGYEIFESMQRD 403
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 134/247 (54%), Gaps = 1/247 (0%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+I G+ R +++A+ + RM++S I +EFT+ +V+ + + +G+Q+HA +
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
S F S L+ LY K +EA+ F ++VS+ AL+ GY+ G +A +
Sbjct: 315 REDFSFHFDNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F EM E+N++SW M+ G ++ G EE + F M REGF P + F I + A + A
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
G+++HA +K + GN+LI+ YAKCG +E++ +F + + VS NA++
Sbjct: 434 CNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL 493
Query: 321 AQNGRGG 327
Q+G G
Sbjct: 494 GQHGHGA 500
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 128/253 (50%), Gaps = 7/253 (2%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS-STVLRNVVIGRQLHACAT 139
+I GF+ + AI+LF +M +P+ FTF +VL + V + Q HA A
Sbjct: 117 NAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAAL 176
Query: 140 KIGLASNVFVGSALLDLYVKL----STIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFE 195
K G V +AL+ +Y K S + A+K F + + S+T ++ GY+K G F+
Sbjct: 177 KSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFD 236
Query: 196 DALQVFHEMPER-NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
++ M + +V++NAM+ G G +EA+ M+ G E T+PSVI A
Sbjct: 237 LGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC 296
Query: 255 AKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCN 314
A L +GK+ HA ++ NSL+S Y KCG +++ +F K+ +++VS N
Sbjct: 297 ATAGLLQLGKQVHAYVLR-REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWN 355
Query: 315 AVVCGYAQNGRGG 327
A++ GY +G G
Sbjct: 356 ALLSGYVSSGHIG 368
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 130 IGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYL 189
+ R +H G + + L+D+Y K S + A++ F + P+ ++ T +V GY
Sbjct: 32 LARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYC 91
Query: 190 KRGRFEDALQVFHEMP--ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
G A VF + P R+ V +NAM+ G S A+N F M EGF P TF
Sbjct: 92 ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151
Query: 248 PSVITAAAKIA-ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL-----M 301
SV+ A +A +FHA A+K V N+L+S Y+KC S SLL +
Sbjct: 152 ASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS-SPSLLHSARKV 210
Query: 302 FNKLLKRNIVSCNAVVCGYAQNG 324
F+++L+++ S ++ GY +NG
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNG 233
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F E+ + S +I G A+ E+ + LFS M P ++ F + S VL
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
G+Q HA KIG S++ G+AL+ +Y K +EEA+
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEAR-------------------- 472
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
QVF MP + VSWNA++ Q GH EAV+ + +ML++G P T
Sbjct: 473 -----------QVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 248 PSVITAAAKIAALGMGKRF 266
+V+TA + + G+++
Sbjct: 522 LTVLTACSHAGLVDQGRKY 540
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 157/304 (51%), Gaps = 16/304 (5%)
Query: 37 HSLATKHENTVVQKDIIPYGLDPTTFQV---------------ACHMFDEISDLTGESAT 81
+ +++E + II +GL ++F V A +F+++S+
Sbjct: 18 QRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYN 77
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIR-PNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+II + + D I ++ ++L P+ FTF + S L + +G+Q+H K
Sbjct: 78 SIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCK 137
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G +V +AL+D+Y+K + +A K F + +V+S+ +L+ GY + G+ + A +
Sbjct: 138 FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGL 197
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
FH M ++ +VSW AM+ G + G EA++FF +M G P E + SV+ + A++ +L
Sbjct: 198 FHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSL 257
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
+GK H A + V N+LI Y+KCG + ++ +F ++ ++++S + ++ GY
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGY 317
Query: 321 AQNG 324
A +G
Sbjct: 318 AYHG 321
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 5/177 (2%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F + D T S T +I G+ C+ +A+ F M + I P+E + +VL S L +
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ +G+ +H A + G V +AL+++Y K I +A + FG + +V+S++ ++ G
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 188 YLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
Y G A++ F+EM V +++ ++ CS G +E + +F DM+R+ +
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF-DMMRQDY 372
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 91/195 (46%), Gaps = 32/195 (16%)
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKR 191
++++A GL+ + F+ + ++D K+ ++ A + F +PNV Y +++ Y
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 192 GRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF-IPTESTFPSV 250
+ D ++++ ++ LR+ F +P TFP +
Sbjct: 87 SLYCDVIRIYKQL-------------------------------LRKSFELPDRFTFPFM 115
Query: 251 ITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
+ A + + +GK+ H K + V N+LI Y K + D+ +F+++ +R++
Sbjct: 116 FKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV 175
Query: 311 VSCNAVVCGYAQNGR 325
+S N+++ GYA+ G+
Sbjct: 176 ISWNSLLSGYARLGQ 190
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 140/248 (56%), Gaps = 2/248 (0%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I G+A ++AI ++ M +I P FTF +L + ++++ +GRQ HA +
Sbjct: 118 TAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFR 177
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+ V+VG+ ++D+YVK +I+ A+K F + +V+S+T L+ Y + G E A ++
Sbjct: 178 LRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAEL 237
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F +P +++V+W AMV G +Q +EA+ +F M + G E T I+A A++ A
Sbjct: 238 FESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGAS 297
Query: 261 GMGKRFHACAIKC-LGKLD-VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
R A K D V +G++LI Y+KCG++E+++ +F + +N+ + ++++
Sbjct: 298 KYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMIL 357
Query: 319 GYAQNGRG 326
G A +GR
Sbjct: 358 GLATHGRA 365
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 8/207 (3%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+ A +F+ + + T ++ GFA+ ++A+ F RM S IR +E T + +
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 290
Query: 122 STVLRNVVIGRQLHACATKIGLA--SNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
L + A K G + +V +GSAL+D+Y K +EEA F + NV
Sbjct: 291 CAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVF 350
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMPER-----NVVSWNAMVGGCSQTGHNEEAVNFFID 234
+Y++++ G GR ++AL +FH M + N V++ + CS +G ++ F
Sbjct: 351 TYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDS 410
Query: 235 MLRE-GFIPTESTFPSVITAAAKIAAL 260
M + G PT + ++ + L
Sbjct: 411 MYQTFGVQPTRDHYTCMVDLLGRTGRL 437
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 71/128 (55%)
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A +V + RN W A++ G + G +EA+ + M +E P TF +++ A
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
+ L +G++FHA + G V+VGN++I Y KC S++ + +F+++ +R+++S +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 317 VCGYAQNG 324
+ YA+ G
Sbjct: 222 IAAYARVG 229
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 147/262 (56%), Gaps = 1/262 (0%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDEI + + S I+ + + +++A+ +F +ML +RP T +V+ + +
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ +G+ +HA A K+ + ++ V +++ D+YVK +E A++ F T+ ++ S+T+
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+ GY G +A ++F MPERN+VSWNAM+GG +EA++F M +E
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T ++ + I+ + MGK+ H + +V V N+L+ Y KCG+++ + + F +
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQ 455
Query: 305 LLK-RNIVSCNAVVCGYAQNGR 325
+ + R+ VS NA++ G A+ GR
Sbjct: 456 MSELRDEVSWNALLTGVARVGR 477
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 31/260 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +F+E+ + G S +I A+ ++ +F RM +R E +F VL S +
Sbjct: 115 ARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGL 174
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ ++ + RQLH K G + NV + ++++D+Y K + +A++ F + +P+ VS+ +
Sbjct: 175 ILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVI 234
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
V YL+ G F D EAV F ML P
Sbjct: 235 VRRYLEMG-FND------------------------------EAVVMFFKMLELNVRPLN 263
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T SV+ A ++ AL +GK HA A+K D V S+ Y KC +E + +F++
Sbjct: 264 HTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQ 323
Query: 305 LLKRNIVSCNAVVCGYAQNG 324
+++ S + + GYA +G
Sbjct: 324 TRSKDLKSWTSAMSGYAMSG 343
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 127/262 (48%), Gaps = 33/262 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD + + S ++ G+ H ++A+ + M + T +L+ +
Sbjct: 348 ARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSG 407
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ +V +G+Q H + G +NV V +ALLD+Y K T++ A N+
Sbjct: 408 ISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSA----------NIW----- 452
Query: 185 VCGYLKRGRFEDALQVFHEMPE-RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
F +M E R+ VSWNA++ G ++ G +E+A++FF M E P+
Sbjct: 453 ----------------FRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPS 495
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
+ T +++ A I AL +GK H I+ K+DV + +++ Y+KC + ++ +F
Sbjct: 496 KYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFK 555
Query: 304 KLLKRNIVSCNAVVCGYAQNGR 325
+ R+++ N+++ G +NGR
Sbjct: 556 EAATRDLILWNSIIRGCCRNGR 577
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%)
Query: 176 PNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
P + + Y K G +DA ++F EMPER+ SWNA++ C+Q G ++E F M
Sbjct: 94 PPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM 153
Query: 236 LREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSM 295
R+G TE++F V+ + I L + ++ H +K +V + S++ Y KC M
Sbjct: 154 NRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVM 213
Query: 296 EDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
D+ +F++++ + VS N +V Y + G
Sbjct: 214 SDARRVFDEIVNPSDVSWNVIVRRYLEMG 242
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 61 TFQVACHMFDEISDLTGE-SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL 119
T Q A F ++S+L E S ++ G A+ E A+ F M + +P+++T T+L
Sbjct: 445 TLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLL 503
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
+ + +G+ +H + G +V + A++D+Y K
Sbjct: 504 AGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRC----------------- 546
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG 239
F+ A++VF E R+++ WN+++ GC + G ++E F+ + EG
Sbjct: 547 --------------FDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEG 592
Query: 240 FIPTESTFPSVITAAAKIAALGMG-KRFHACAIKCLGKLDVFVGNSLISFYAKCG---SM 295
P TF ++ A + + +G + F + + K V + +I Y K G +
Sbjct: 593 VKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQL 652
Query: 296 EDSLLMF 302
E+ LL+
Sbjct: 653 EEFLLLM 659
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 33/260 (12%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
++ L+ RML + P+ +T+ +++ +S+ G L A K G +V + + L+D
Sbjct: 855 SLELYVRMLRDSVSPSSYTYSSLVKASSFASR--FGESLQAHIWKFGFGFHVKIQTTLID 912
Query: 156 LYVKLSTIEEAQKAFGDTQHPNVVSYTALVC----------------------------- 186
Y I EA+K F + + +++T +V
Sbjct: 913 FYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCL 972
Query: 187 --GYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
GY+ G E A +F++MP ++++SW M+ G SQ EA+ F M+ EG IP E
Sbjct: 973 INGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDE 1032
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T +VI+A A + L +GK H ++ LDV++G++L+ Y+KCGS+E +LL+F
Sbjct: 1033 VTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFN 1092
Query: 305 LLKRNIVSCNAVVCGYAQNG 324
L K+N+ N+++ G A +G
Sbjct: 1093 LPKKNLFCWNSIIEGLAAHG 1112
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 37/245 (15%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S TT+I G+++ + +AI +F +M+ I P+E T TV+ + L + IG+++H
Sbjct: 999 SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYT 1058
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
+ G +V++GSAL+D+Y K CG L+R AL
Sbjct: 1059 LQNGFVLDVYIGSALVDMYSK--------------------------CGSLER-----AL 1087
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
VF +P++N+ WN+++ G + G +EA+ F M E P TF SV TA
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 259 ALGMGKRFHACAIK---CLGKLDVFVGNSLISFYAKCGSMEDSL-LMFNKLLKRNIVSCN 314
+ G+R + I + ++ + G ++ ++K G + ++L L+ N + N V
Sbjct: 1148 LVDEGRRIYRSMIDDYSIVSNVEHYGG--MVHLFSKAGLIYEALELIGNMEFEPNAVIWG 1205
Query: 315 AVVCG 319
A++ G
Sbjct: 1206 ALLDG 1210
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 193 RFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
R + A+ +M E NV +NA+ G H ++ ++ MLR+ P+ T+ S++
Sbjct: 820 RLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK 879
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVS 312
A++ A G+ A K V + +LI FY+ G + ++ +F+++ +R+ ++
Sbjct: 880 ASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIA 937
Query: 313 CNAVVCGY 320
+V Y
Sbjct: 938 WTTMVSAY 945
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 133/266 (50%), Gaps = 31/266 (11%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+AC +F+EI + + T+I G+ K + ++IHLF +M S +P++FTF VL +
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L + +G+QLHA + G + + VG+ +LD Y K + E +
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETR-------------- 305
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
+F EMPE + VS+N ++ SQ E +++FF +M GF
Sbjct: 306 -----------------MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFD 348
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
F ++++ AA +++L MG++ H A+ + VGNSL+ YAKC E++ L+
Sbjct: 349 RRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELI 408
Query: 302 FNKLLKRNIVSCNAVVCGYAQNGRGG 327
F L +R VS A++ GY Q G G
Sbjct: 409 FKSLPQRTTVSWTALISGYVQKGLHG 434
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 33/260 (12%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FDE+ +L S +I +++ +E ++H F M F F T+L + L +
Sbjct: 307 LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS 366
Query: 128 VVIGRQLHACATKIGLASNVF-VGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ +GRQLH C + A ++ VG++L+D+Y K EEA+
Sbjct: 367 LQMGRQLH-CQALLATADSILHVGNSLVDMYAKCEMFEEAE------------------- 406
Query: 187 GYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTEST 246
+F +P+R VSW A++ G Q G + + F M +ST
Sbjct: 407 ------------LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 247 FPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
F +V+ A+A A+L +GK+ HA I+ +VF G+ L+ YAKCGS++D++ +F ++
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 307 KRNIVSCNAVVCGYAQNGRG 326
RN VS NA++ +A NG G
Sbjct: 515 DRNAVSWNALISAHADNGDG 534
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 35/284 (12%)
Query: 43 HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSR 102
H+NTV +I + A +FD + D T + T ++ +A+ ++A LF +
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 103 MLASK--IRPNEFTFGTVLH--SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYV 158
M S P+ TF T+L + V +N V Q+HA A K+G +N F+ +
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV--GQVHAFAVKLGFDTNPFLTVS------ 187
Query: 159 KLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGG 218
L+ Y + R + A +F E+PE++ V++N ++ G
Sbjct: 188 -----------------------NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 219 CSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLD 278
+ G E+++ F+ M + G P++ TF V+ A + +G++ HA ++ D
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 279 VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
VGN ++ FY+K + ++ ++F+++ + + VS N V+ Y+Q
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F+ A +F + T S T +I G+ ++ H + LF++M S +R ++ TF TVL +
Sbjct: 402 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
S ++++G+QLHA + G NVF GS L+D+Y K +I++A + F + N VS+
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 521
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
AL+ + G E A+ F +M E + VS ++ CS G E+ +F
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF----- 576
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGK 276
A + I + K+ +AC + LG+
Sbjct: 577 --------------QAMSPIYGITPKKKHYACMLDLLGR 601
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKR 191
R++ A K G ++ + +++ ++ + A+K + + H N VS ++ G++K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 192 GRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG--FIPTESTFPS 249
G A +F MP+R VV+W ++G ++ H +EA F M R +P TF +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 250 VITAAAKIAALGMGKRFHACAIKCLGKLDVF--VGNSLISFYAKCGSMEDSLLMFNKLLK 307
++ + HA A+K + F V N L+ Y + ++ + ++F ++ +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 308 RNIVSCNAVVCGYAQNG 324
++ V+ N ++ GY ++G
Sbjct: 213 KDSVTFNTLITGYEKDG 229
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 149/264 (56%), Gaps = 1/264 (0%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
AC +F I + S ++I GF ++ + A+ LF +M + ++ + T VL +
Sbjct: 185 ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAK 244
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+RN+ GRQ+ + + + N+ + +A+LD+Y K +IE+A++ F + + V++T +
Sbjct: 245 IRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 304
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDM-LREGFIPT 243
+ GY +E A +V + MP++++V+WNA++ Q G EA+ F ++ L++
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLN 364
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
+ T S ++A A++ AL +G+ H+ K +++ V ++LI Y+KCG +E S +FN
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 304 KLLKRNIVSCNAVVCGYAQNGRGG 327
+ KR++ +A++ G A +G G
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGN 448
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 131/263 (49%), Gaps = 34/263 (12%)
Query: 61 TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLA-SKIRPNEFTFGTVL 119
+ + A +FDEI + T+I +A +I F M++ S+ PN++TF ++
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
++ + ++ +G+ LH A K + S+VFV ++L+ Y ++ A K F + +VV
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMPERNV-VSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
S+ +++ G++++G + AL++F +M +V S MVG
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG--------------------- 237
Query: 239 GFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDS 298
V++A AKI L G++ + + +++ + N+++ Y KCGS+ED+
Sbjct: 238 -----------VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 299 LLMFNKLLKRNIVSCNAVVCGYA 321
+F+ + +++ V+ ++ GYA
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYA 309
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Query: 194 FEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF-IPTESTFPSVIT 252
E A +VF E+P+ N +WN ++ + ++ F+DM+ E P + TFP +I
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVS 312
AAA++++L +G+ H A+K DVFV NSLI Y CG ++ + +F + ++++VS
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 313 CNAVVCGYAQNG 324
N+++ G+ Q G
Sbjct: 200 WNSMINGFVQKG 211
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRM-LASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACAT 139
+I + + +A+ +F + L ++ N+ T + L + + + +GR +H+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQ 199
K G+ N V SAL+ +Y K +E++++ F + +V ++A++ G G +A+
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 200 VFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITAA 254
+F++M E NV V++ + CS TG +EA + F M G +P E + ++
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 255 AKIAALGMGKRF 266
+ L +F
Sbjct: 513 GRSGYLEKAVKF 524
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 135/249 (54%), Gaps = 36/249 (14%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T +I GF + E+A+ LFS M +RPNEFT+ +L T L V+ ++HA
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL---TAL-PVISPSEVHAQV 419
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K + VG+ALLD YVKL G+ E+A
Sbjct: 420 VKTNYERSSTVGTALLDAYVKL-------------------------------GKVEEAA 448
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA-AAKI 257
+VF + ++++V+W+AM+ G +QTG E A+ F ++ + G P E TF S++ AA
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 258 AALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVV 317
A++G GK+FH AIK + V ++L++ YAK G++E + +F + ++++VS N+++
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 318 CGYAQNGRG 326
GYAQ+G+
Sbjct: 569 SGYAQHGQA 577
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 135/283 (47%), Gaps = 32/283 (11%)
Query: 43 HENTVVQKDIIPYG-LDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFS 101
+ N V Q I +G + + A ++FD+ ES +++ GF++ ++A LF
Sbjct: 23 YANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFL 82
Query: 102 RMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLS 161
+ + + F +VL S L + + GRQLH K G +V VG++L+D Y+K S
Sbjct: 83 NIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS 142
Query: 162 TIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQ 221
F+D +VF EM ERNVV+W ++ G ++
Sbjct: 143 N-------------------------------FKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 222 TGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFV 281
N+E + F+ M EG P TF + + A+ G G + H +K + V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 282 GNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
NSLI+ Y KCG++ + ++F+K +++V+ N+++ GYA NG
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 38/284 (13%)
Query: 44 ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM 103
++ V ++ + + F+ +FDE+ + + TT+I G+A+ +++ + LF RM
Sbjct: 126 DDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRM 185
Query: 104 LASKIRPNEFTFGTVLHSSTVLRNVVIGR--QLHACATKIGLASNVFVGSALLDLYVKLS 161
+PN FTF L + V GR Q+H K GL + V ++L++LY+K
Sbjct: 186 QNEGTQPNSFTFAAAL--GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCG 243
Query: 162 TIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQ 221
+ +A+ F T+ +VV++ +++ GY G +AL +F+ M
Sbjct: 244 NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM----------------- 286
Query: 222 TGHNEEAVNFFIDMLREGFIP-TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVF 280
R ++ +ES+F SVI A + L ++ H +K D
Sbjct: 287 ---------------RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 281 VGNSLISFYAKCGSMEDSLLMFNKL-LKRNIVSCNAVVCGYAQN 323
+ +L+ Y+KC +M D+L +F ++ N+VS A++ G+ QN
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
+ A +F I D + + ++ G+A+ E AI +F + I+PNEFTF ++L+
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 123 TVLR-NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
++ G+Q H A K L S++ V SALL +Y K IE A++ F + ++VS+
Sbjct: 505 AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSW 564
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
+++ GY + G+ AL VF EM +R V V++ + C+ G EE +F M+R
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624
Query: 238 EGFI-PTE 244
+ I PT+
Sbjct: 625 DCKIAPTK 632
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 138/278 (49%), Gaps = 35/278 (12%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I G + E ++ F ML ++P+ TF VL S++ L +GR LHA K
Sbjct: 97 LIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNF 156
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ---------------------------- 174
+ + FV +L+D+Y K ++ A + F ++
Sbjct: 157 VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMAT 216
Query: 175 -------HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEE 227
N S++ L+ GY+ G A Q+F MPE+NVVSW ++ G SQTG E
Sbjct: 217 TLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYET 276
Query: 228 AVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLIS 287
A++ + +ML +G P E T +V++A +K ALG G R H + KLD +G +L+
Sbjct: 277 AISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVD 336
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
YAKCG ++ + +F+ + ++I+S A++ G+A +GR
Sbjct: 337 MYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGR 374
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 4/183 (2%)
Query: 57 LDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFG 116
+D A +F+ + + S TT+I GF++ +E AI + ML ++PNE+T
Sbjct: 238 VDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIA 297
Query: 117 TVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP 176
VL + + + G ++H G+ + +G+AL+D+Y K ++ A F + H
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFF 232
+++S+TA++ G+ GRF A+Q F +M + + V + A++ C + + +NFF
Sbjct: 358 DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFF 417
Query: 233 IDM 235
M
Sbjct: 418 DSM 420
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
+L +F ERN NA++ G ++ E +V FI MLR G P TFP V+ + +K
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK 138
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF----NKLLKRNIVS 312
+ +G+ HA +K D FV SL+ YAK G ++ + +F +++ K +I+
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 313 CNAVVCGY 320
N ++ GY
Sbjct: 199 WNVLINGY 206
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 1/260 (0%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD + + S T++ G+A+ +A+ + S I+ NEF+F +L + R
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ + RQ H G SNV + +++D Y K +E A++ F + ++ +T L+ G
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y K G E A ++F EMPE+N VSW A++ G + G A++ F M+ G P + TF
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL-L 306
S + A+A IA+L GK H I+ + + V +SLI Y+K GS+E S +F
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 307 KRNIVSCNAVVCGYAQNGRG 326
K + V N ++ AQ+G G
Sbjct: 375 KHDCVFWNTMISALAQHGLG 394
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 31/212 (14%)
Query: 146 NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
N + + L+ +Y+K +A K F N+ S+ +V GY+K G A VF MP
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 206 ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
ER+VVSWN MV G +Q G+ EA+ F+ + R G E +F ++TA K L + ++
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQ 200
Query: 266 FH--------------ACAI--------------KCLGKL---DVFVGNSLISFYAKCGS 294
H +C+I +C ++ D+ + +LIS YAK G
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGD 260
Query: 295 MEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
ME + +F ++ ++N VS A++ GY + G G
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSG 292
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+ A +F E+ + S T +I G+ ++ A+ LF +M+A ++P +FTF + L +
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFG--DTQHPNVV 179
S + ++ G+++H + + N V S+L+D+Y K ++E +++ F D +H + V
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKH-DCV 379
Query: 180 SYTALVCGYLKRGRFEDALQVFHEM------PERNVVSWNAMVGGCSQTGHNEEAVNFFI 233
+ ++ + G AL++ +M P R + ++ CS +G EE + +F
Sbjct: 380 FWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV--VILNACSHSGLVEEGLRWFE 437
Query: 234 DM-LREGFIPTESTFPSVI 251
M ++ G +P + + +I
Sbjct: 438 SMTVQHGIVPDQEHYACLI 456
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 147/296 (49%), Gaps = 34/296 (11%)
Query: 66 CHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVL 125
C FD++ S TT+I G+ + AI + M+ I P +FT VL S
Sbjct: 100 CEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAAT 159
Query: 126 RNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALV 185
R + G+++H+ K+GL NV V ++LL++Y K A+ F ++ S+ A++
Sbjct: 160 RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI 219
Query: 186 CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTE 244
+++ G+ + A+ F +M ER++V+WN+M+ G +Q G++ A++ F MLR+ + P
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME-------- 296
T SV++A A + L +GK+ H+ + + V N+LIS Y++CG +E
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 297 -----------DSLL--------------MFNKLLKRNIVSCNAVVCGYAQNGRGG 327
+LL +F L R++V+ A++ GY Q+G G
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 144/267 (53%), Gaps = 4/267 (1%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLA-SKIRPNEFTFGTVLH 120
+A F+++++ + ++I GF +R A+ +FS+ML S + P+ FT +VL
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGD--TQHPNV 178
+ L + IG+Q+H+ G + V +AL+ +Y + +E A++ T+ +
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 179 VSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
+TAL+ GY+K G A +F + +R+VV+W AM+ G Q G EA+N F M+
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 239 GFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDS 298
G P T ++++ A+ +A+L GK+ H A+K V V N+LI+ YAK G++ +
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467
Query: 299 LLMFNKLL-KRNIVSCNAVVCGYAQNG 324
F+ + +R+ VS +++ AQ+G
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHG 494
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 104/192 (54%)
Query: 134 LHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGR 193
+H K GL +V++ + L+++Y K A+K F + S+ ++ Y KRG
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 194 FEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA 253
+ + F ++P+R+ VSW M+ G G +A+ DM++EG PT+ T +V+ +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 254 AAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSC 313
A + GK+ H+ +K + +V V NSL++ YAKCG + +F++++ R+I S
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 314 NAVVCGYAQNGR 325
NA++ + Q G+
Sbjct: 216 NAMIALHMQVGQ 227
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 30/202 (14%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A ++F + D + T +I G+ + + +AI+LF M+ RPN +T +L ++
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 425
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L ++ G+Q+H A K G +V V +AL+ +Y K I A +AF
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF-------------- 471
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
D ++ ER+ VSW +M+ +Q GH EEA+ F ML EG P
Sbjct: 472 -----------DLIRC-----ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 245 STFPSVITAAAKIAALGMGKRF 266
T+ V +A + G+++
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQY 537
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 140/260 (53%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD + + + S TT+I G+A+ + +A+ LF M I NE T TV+ + +
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L + R L + A K+ L VFV + LL +Y +++A+K F + N+V++ +
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVM 245
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+ GY K G E A ++F ++ E+++VSW M+ GC + +EA+ ++ +MLR G P+E
Sbjct: 246 LNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE 305
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
+++A+A+ G + H +K F+ ++I FYA ++ +L F
Sbjct: 306 VMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEA 365
Query: 305 LLKRNIVSCNAVVCGYAQNG 324
+K +I S NA++ G+ +NG
Sbjct: 366 SVKDHIASRNALIAGFVKNG 385
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 116/213 (54%)
Query: 112 EFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFG 171
E + L S +V GRQ+H K GL SN ++ +++L++Y K + +A+ F
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 172 DTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNF 231
D + S+ +V GY++ R DAL++F MPER+ VS+ ++ G +Q EA+
Sbjct: 101 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMEL 160
Query: 232 FIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAK 291
F +M G + E T +VI+A + + + + + AIK + VFV +L+ Y
Sbjct: 161 FREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 220
Query: 292 CGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
C ++D+ +F+++ +RN+V+ N ++ GY++ G
Sbjct: 221 CLCLKDARKLFDEMPERNLVTWNVMLNGYSKAG 253
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 139/269 (51%), Gaps = 8/269 (2%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+ A +FD+I++ S T+I G +++ ++A+ ++ ML ++P+E +L +
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA 314
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
S G QLH K G F+ + ++ Y + I+ A + F + ++ S
Sbjct: 315 SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASR 374
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
AL+ G++K G E A +VF + ++++ SWNAM+ G +Q+ + A++ F +M+ +
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 242 -PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
P T SV +A + + +L GKR H + + ++I YAKCGS+E +L
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALN 494
Query: 301 MFNKLLKRNIVSC-----NAVVCGYAQNG 324
+F++ +NI S NA++CG A +G
Sbjct: 495 IFHQ--TKNISSSTISPWNAIICGSATHG 521
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 36/248 (14%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHS 121
+ A +FD+ D S +I G+A+ + A+HLF M++S +++P+ T +V +
Sbjct: 388 EQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSA 447
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ L ++ G++ H Y+ STI PN
Sbjct: 448 ISSLGSLEEGKRAHD--------------------YLNFSTIP-----------PNDNLT 476
Query: 182 TALVCGYLKRGRFEDALQVFHE---MPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
A++ Y K G E AL +FH+ + + WNA++ G + GH + A++ + D+
Sbjct: 477 AAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSL 536
Query: 239 GFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG-KLDVFVGNSLISFYAKCGSMED 297
P TF V++A + +GK + G + D+ ++ K G +E+
Sbjct: 537 PIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEE 596
Query: 298 SLLMFNKL 305
+ M K+
Sbjct: 597 AKEMIKKM 604
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 152/302 (50%), Gaps = 32/302 (10%)
Query: 26 RYITKTVHTHYHSLATKH-ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTII 84
R + H H + T++ T ++ ++ + + A + DE+ + S T +I
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 125
Query: 85 CGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA 144
+++ +A+ +F+ M+ S +PNEFTF TVL S + +G+Q+H K
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
S++FVGS+LLD+Y K I+EA+ ++F +
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAR-------------------------------EIFECL 214
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
PER+VVS A++ G +Q G +EEA+ F + EG P T+ S++TA + +A L GK
Sbjct: 215 PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ H ++ + NSLI Y+KCG++ + +F+ + +R +S NA++ GY+++G
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 334
Query: 325 RG 326
G
Sbjct: 335 LG 336
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 9/221 (4%)
Query: 110 PNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNV-FVG-SALLDLYVKLSTIEEAQ 167
P + T+L S + N GR A L + F G ALL+ + + + Q
Sbjct: 16 PTNYVLQTILPISQLCSN---GRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQ 72
Query: 168 KAFG---DTQH-PNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTG 223
+ T++ P T L+ Y K EDA +V EMPE+NVVSW AM+ SQTG
Sbjct: 73 RVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTG 132
Query: 224 HNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN 283
H+ EA+ F +M+R P E TF +V+T+ + + LG+GK+ H +K +FVG+
Sbjct: 133 HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGS 192
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
SL+ YAK G ++++ +F L +R++VSC A++ GYAQ G
Sbjct: 193 SLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T II G+A+ E+A+ +F R+ + + PN T+ ++L + + L + G+Q H
Sbjct: 221 SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV 280
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
+ L + ++L+D+Y K + A++ F + +S+ A++ GY K G + L
Sbjct: 281 LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVL 340
Query: 199 QVFHEMPER-----NVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
++F M + + V+ A++ GCS + +N F M+
Sbjct: 341 ELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 131/238 (55%), Gaps = 4/238 (1%)
Query: 93 HEDAIHLFSRMLASK--IRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVG 150
H + F R++ ++ RPN F + VL S+ L + +H K G V V
Sbjct: 105 HASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQ 164
Query: 151 SALLDLYVK-LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
+ALL Y +S I A++ F + NVVS+TA++ GY + G +A+ +F +MPER+V
Sbjct: 165 TALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDV 224
Query: 210 VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIAALGMGKRFHA 268
SWNA++ C+Q G EAV+ F M+ E I P E T V++A A+ L + K HA
Sbjct: 225 PSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHA 284
Query: 269 CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
A + DVFV NSL+ Y KCG++E++ +F K+++ + N+++ +A +GR
Sbjct: 285 FAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRS 342
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 46/284 (16%)
Query: 23 VSCRYITKTVHTHYHSLATKHENTVVQKDII-PYGLDPTTFQVACHMFDEISDLTGESAT 81
+S + T VHTH + H VVQ ++ Y + +A +FDE+S+ S T
Sbjct: 139 LSSAFSTPLVHTHLFK-SGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWT 197
Query: 82 TIICGFAKR--------------------------HCHE-----DAIHLFSRML-ASKIR 109
++ G+A+ C + +A+ LF RM+ IR
Sbjct: 198 AMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIR 257
Query: 110 PNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKA 169
PNE T VL + + + + +HA A + L+S+VFV ++L+DLY K +EEA
Sbjct: 258 PNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSV 317
Query: 170 FGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV-------VSWNAMVGGCSQT 222
F ++ ++ +++ + GR E+A+ VF EM + N+ +++ ++ C+
Sbjct: 318 FKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHG 377
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRF 266
G + +F D++ F P + I LG RF
Sbjct: 378 GLVSKGRGYF-DLMTNRF----GIEPRIEHYGCLIDLLGRAGRF 416
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 134/234 (57%), Gaps = 6/234 (2%)
Query: 97 IHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDL 156
I ++ RM ++ P+ TF +L S ++ +G++ HA GL + FV ++LL++
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 157 YVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMV 216
Y + AQ+ F D+ ++ ++ ++V Y K G +DA ++F EMPERNV+SW+ ++
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 217 GGCSQTGHNEEAVNFFIDML----REGFI-PTESTFPSVITAAAKIAALGMGKRFHACAI 271
G G +EA++ F +M E F+ P E T +V++A ++ AL GK HA
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL-LKRNIVSCNAVVCGYAQNG 324
K ++D+ +G +LI YAKCGS+E + +FN L K+++ + +A++C A G
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 18/276 (6%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK-----IRPNEFTFGTVL 119
A +FDE+ + S + +I G+ +++A+ LF M K +RPNEFT TVL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDT-QHPNV 178
+ L + G+ +HA K + ++ +G+AL+D+Y K ++E A++ F +V
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 179 VSYTALVCGYLKRGRFEDALQVFHEMP-----ERNVVSWNAMVGGCSQTGHNEEAVNFFI 233
+Y+A++C G ++ Q+F EM N V++ ++G C G E ++F
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 234 DMLRE-GFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKC 292
M+ E G P+ + ++ + + + F A + DV + SL+S
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM---EPDVLIWGSLLSGSRML 383
Query: 293 GSMEDSLLMFNKLLKRNIVSCNAVVC---GYAQNGR 325
G ++ +L++ + ++ A V YA+ GR
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGR 419
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 147/294 (50%), Gaps = 32/294 (10%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSST 123
A +FD +++ + T +I G+ K ED LF RM ++ N T + +
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
G Q+H +++ L ++F+G++L+ +Y KL + EA+ FG ++ + VS+ +
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCS----------------------- 220
L+ G ++R + +A ++F +MP +++VSW M+ G S
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 221 --------QTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
G+ EEA+ +F ML++ P TF SV++A A +A L G + H +K
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 273 CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
D+ V NSL+S Y KCG+ D+ +F+ + + NIVS N ++ GY+ NG G
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCH-EDAIHLF-----------SRMLASKIRPNE 112
A +FDE+ S +I K C A LF + M+ +R
Sbjct: 100 AWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGR 159
Query: 113 FTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGD 172
F L++ T ++ + +ASNV LL Y++ EA + F
Sbjct: 160 FDEAEFLYAETPVK------------FRDSVASNV-----LLSGYLRAGKWNEAVRVFQG 202
Query: 173 TQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFF 232
VVS +++V GY K GR DA +F M ERNV++W AM+ G + G E+ F
Sbjct: 203 MAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLF 262
Query: 233 IDMLREGFIPTES-TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAK 291
+ M +EG + S T + A G + H + + D+F+GNSL+S Y+K
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 292 CGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
G M ++ +F + ++ VS N+++ G Q
Sbjct: 323 LGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I F +E+A+ F +ML ++ PN +TF +VL ++ L +++ G Q+H K
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+ + +++ V ++L+ +Y K +A K F PN+VSY ++ GY G + AL++
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKL 526
Query: 201 FHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
F + E N V++ A++ C G+ + +F M
Sbjct: 527 FSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Query: 147 VFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPE 206
+F ++ + + + ++EA+ F + ++VS+ A++ Y + G+ A QVF EMP
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 207 RNVVSWNAMVGGCSQTGHN-EEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
R S+NAM+ + + +A F D+ + + ++ ++IT + +
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAV----SYATMITGFVRAGRFDEAEF 165
Query: 266 FHA-CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+A +K D N L+S Y + G +++ +F + + +VSC+++V GY + G
Sbjct: 166 LYAETPVKF---RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMG 222
Query: 325 R 325
R
Sbjct: 223 R 223
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 8/262 (3%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A FD ++ S TII G+A+ ++A LF + FT+ ++
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYIQ 293
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
R V R+L + N +A+L YV+ +E A++ F NV ++ +
Sbjct: 294 NRMVEEARELFDKMPE----RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+ GY + G+ +A +F +MP+R+ VSW AM+ G SQ+GH+ EA+ F+ M REG
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
S+F S ++ A + AL +GK+ H +K + FVGN+L+ Y KCGS+E++ +F +
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 305 LLKRNIVSCNAVVCGYAQNGRG 326
+ ++IVS N ++ GY+++G G
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFG 491
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 47/228 (20%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A ++FD++ S +I G+++ +A+ LF +M R N +F + L +
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ + +G+QLH K G + FVG+ALL +Y K +IEEA
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN----------------- 464
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+F EM +++VSWN M+ G S+ G E A+ FF M REG P +
Sbjct: 465 --------------DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 245 STFPSVITAAAKIAALGMGKRF----------------HACAIKCLGK 276
+T +V++A + + G+++ +AC + LG+
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 31/286 (10%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F++A +FDE+ + S +I G+ + A LF M + ++ T+L
Sbjct: 111 FELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSG 166
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
V R + + N +ALL YV+ S +EEA F ++ +VS+
Sbjct: 167 YAQNGCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFID------- 234
L+ G++K+ + +A Q F M R+VVSWN ++ G +Q+G +EA F +
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 235 ---MLREGFIPTE---------STFP--SVITAAAKIAALGMGKRFHACA--IKCLGKLD 278
+ G+I P + ++ A +A G+R + +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 279 VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
V N++I+ YA+CG + ++ +F+K+ KR+ VS A++ GY+Q+G
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 388
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 39/169 (23%)
Query: 157 YVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMV 216
Y++ EA + F + VSY ++ GYL+ G FE A ++F EMPER++VSWN M+
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 217 GGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGK 276
G + + +A F + + +
Sbjct: 134 KGYVRNRNLGKARELF---------------------------------------EIMPE 154
Query: 277 LDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
DV N+++S YA+ G ++D+ +F+++ ++N VS NA++ Y QN +
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSK 203
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 151 SALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVV 210
+ ++ Y++ E A+K F + ++VS+ ++ GY++ A ++F MPER+V
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 211 SWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACA 270
SWN M+ G +Q G ++A + F M + + + + + + K AC
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNS---------KMEEACM 209
Query: 271 I-KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+ K + N L+ + K + ++ F+ + R++VS N ++ GYAQ+G+
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK 265
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 122/231 (52%), Gaps = 31/231 (13%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
E A+ F ML ++I P+ F V + L+ GR +H K GL VFV S+L
Sbjct: 155 EGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSL 214
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
D+Y K CG L +DA +VF E+P+RN V+WN
Sbjct: 215 ADMYGK--------------------------CGVL-----DDASKVFDEIPDRNAVAWN 243
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC 273
A++ G Q G NEEA+ F DM ++G PT T + ++A+A + + GK+ HA AI
Sbjct: 244 ALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN 303
Query: 274 LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+LD +G SL++FY K G +E + ++F+++ ++++V+ N ++ GY Q G
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 31/263 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDEI D + ++ G+ + +E+AI LFS M + P T T L +S
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ V G+Q HA A G+ + +G++LL+ Y K+ IE A+ F +VV++ +
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLI 346
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+ GY+++G EDA+ + M ++ L+ +
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMR---------------------------LEKLKYDCV--- 376
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T ++++AAA+ L +GK I+ + D+ + ++++ YAKCGS+ D+ +F+
Sbjct: 377 -TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
Query: 305 LLKRNIVSCNAVVCGYAQNGRGG 327
++++++ N ++ YA++G G
Sbjct: 436 TVEKDLILWNTLLAAYAESGLSG 458
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 135/303 (44%), Gaps = 40/303 (13%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+ A +FD + + + II G+ ++ EDAI++ M K++ + T T++ +
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH------ 175
+ N+ +G+++ + S++ + S ++D+Y K +I +A+K F T
Sbjct: 385 AARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW 444
Query: 176 -----------------------------PNVVSYTALVCGYLKRGRFEDALQVFHEMPE 206
PNV+++ ++ L+ G+ ++A +F +M
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 207 R----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGM 262
N++SW M+ G Q G +EEA+ F M G P + ++A A +A+L +
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHI 564
Query: 263 GKRFHACAIKCLGKLD-VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYA 321
G+ H I+ L V + SL+ YAKCG + + +F L + NA++ YA
Sbjct: 565 GRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYA 624
Query: 322 QNG 324
G
Sbjct: 625 LYG 627
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 29/232 (12%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
++A+ L + M +R +G +L R++ G+Q+HA K G
Sbjct: 52 KEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG----------- 100
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
D Y + IE T LV Y K E A +F ++ RNV SW
Sbjct: 101 -DFYARNEYIE-----------------TKLVIFYAKCDALEIAEVLFSKLRVRNVFSWA 142
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC 273
A++G + G E A+ F++ML P P+V A + G+ H +K
Sbjct: 143 AIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS 202
Query: 274 LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+ VFV +SL Y KCG ++D+ +F+++ RN V+ NA++ GY QNG+
Sbjct: 203 GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGK 254
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S TT++ G + C E+AI +M S +RPN F+ L + L ++ IGR +H
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYI 572
Query: 139 TK-IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDA 197
+ + +S V + ++L+D+Y K I +A+K FG + + A++ Y G ++A
Sbjct: 573 IRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEA 632
Query: 198 LQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
+ ++ + + + ++ ++ C+ G +A+ F D++
Sbjct: 633 IALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 156/301 (51%), Gaps = 4/301 (1%)
Query: 30 KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAK 89
K +H H + ++ + ++ F VA +F + S +I G+AK
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 90 RHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG--LASNV 147
+ +A+ L+ +M++ I P+E+T ++L L ++ +G+ +H + G +SN+
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 148 FVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER 207
+ +ALLD+Y K A++AF + ++ S+ +V G+++ G E A VF +MP+R
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 208 NVVSWNAMVGGCSQTGHNEEAV-NFFIDM-LREGFIPTESTFPSVITAAAKIAALGMGKR 265
++VSWN+++ G S+ G ++ V F +M + E P T S+I+ AA L G+
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW 389
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
H I+ K D F+ ++LI Y KCG +E + ++F ++++ +++ G A +G
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 326 G 326
G
Sbjct: 450 G 450
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 115/250 (46%), Gaps = 13/250 (5%)
Query: 15 PTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTF------QVACHM 68
P + ++ ++S + LA + + + +KD+ + F + A +
Sbjct: 263 PVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAV 322
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAI-HLFSRM-LASKIRPNEFTFGTVLHSSTVLR 126
FD++ S +++ G++K+ C + + LF M + K++P+ T +++ +
Sbjct: 323 FDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNG 382
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ GR +H ++ L + F+ SAL+D+Y K IE A F +V +T+++
Sbjct: 383 ELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMIT 442
Query: 187 GYLKRGRFEDALQVFHEMPERNVVSWN----AMVGGCSQTGHNEEAVNFFIDMLRE-GFI 241
G G + ALQ+F M E V N A++ CS +G EE ++ F M + GF
Sbjct: 443 GLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFD 502
Query: 242 PTESTFPSVI 251
P + S++
Sbjct: 503 PETEHYGSLV 512
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 168/331 (50%), Gaps = 26/331 (7%)
Query: 21 QVVSCRYITKTVHTHYHSLAT-KHENTVVQKDIIPY----GLDPTTFQVACHMFDEISDL 75
Q+ +CR I H + + + +T+ +I+ + L A +F+++
Sbjct: 29 QINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQR 88
Query: 76 TGESATTIICGFAKRHCHED----AIHLFSRMLASK-IRPNEFTFGTVLHSSTVLRNVVI 130
S TII GF++ ED AI LF M++ + + PN FTF +VL + +
Sbjct: 89 NCFSWNTIIRGFSE--SDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 131 GRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDT--------------QHP 176
G+Q+H A K G + FV S L+ +YV +++A+ F +
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
+V + ++ GY++ G + A +F +M +R+VVSWN M+ G S G ++AV F +M
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
+ P T SV+ A +++ +L +G+ H A ++D +G++LI Y+KCG +E
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNGRGG 327
++ +F +L + N+++ +A++ G+A +G+ G
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAG 357
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
+ A +FD++ + S T+I G++ +DA+ +F M IRPN T +VL +
Sbjct: 225 KAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAI 284
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
+ L ++ +G LH A G+ + +GSAL+D+Y K IE+A F NV++++
Sbjct: 285 SRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWS 344
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLR- 237
A++ G+ G+ DA+ F +M + V V++ ++ CS G EE +F M+
Sbjct: 345 AMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSV 404
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRF 266
+G P + ++ + L + F
Sbjct: 405 DGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 136/268 (50%), Gaps = 2/268 (0%)
Query: 59 PTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK--IRPNEFTFG 116
P+ A +F I+ TII GF++ E AI +F ML S ++P T+
Sbjct: 71 PSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYP 130
Query: 117 TVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP 176
+V + L GRQLH K GL + F+ + +L +YV + EA + F
Sbjct: 131 SVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF 190
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
+VV++ +++ G+ K G + A +F EMP+RN VSWN+M+ G + G ++A++ F +M
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
+ P T S++ A A + A G+ H ++ +L+ V +LI Y KCG +E
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ L +F K+ + N+++ G A NG
Sbjct: 311 EGLNVFECAPKKQLSCWNSMILGLANNG 338
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 51/297 (17%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A ++FDE+ G S ++I GF + +DA+ +F M ++P+ FT ++L++
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L GR +H + N V +AL+D+Y K IEE F + + ++
Sbjct: 271 LGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSM 330
Query: 185 VCGYLKRGRFEDALQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+ G G E A+ +F E+ E + VS+ ++ C+ +G A FF +++E +
Sbjct: 331 ILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF-RLMKEKY 389
Query: 241 -------------------------------IPTEST---FPSVITAAAKIAALGMGKRF 266
+P E + S+++A KI + M KR
Sbjct: 390 MIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKR- 448
Query: 267 HACAIKCLGKLD-------VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
A KCL KLD V + N+ S+ ++E LLM + +++ V C+++
Sbjct: 449 ---AAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKE-VGCSSI 501
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 139/276 (50%), Gaps = 34/276 (12%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F A +FD D + T +I GF + +A+ F M + + NE T +VL +
Sbjct: 154 FDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA 213
Query: 122 STVLRNVVIGRQLHACATKIG-LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
+ + +V GR +H + G + +VF+GS+L+D+Y K S ++AQK
Sbjct: 214 AGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK------------ 261
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
VF EMP RNVV+W A++ G Q+ ++ + F +ML+
Sbjct: 262 -------------------VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
P E T SV++A A + AL G+R H IK +++ G +LI Y KCG +E+++L
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG--RGGFTSWATL 334
+F +L ++N+ + A++ G+A +G R F + T+
Sbjct: 363 VFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 100 FSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVK 159
+ M + + P+ TF +L + LR+ Q HA K GL S+ FV ++L
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSL------ 144
Query: 160 LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGC 219
+ GY G F+ A ++F +++VV+W AM+ G
Sbjct: 145 -------------------------ISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGF 179
Query: 220 SQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC-LGKLD 278
+ G EA+ +F++M + G E T SV+ AA K+ + G+ H ++ K D
Sbjct: 180 VRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCD 239
Query: 279 VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
VF+G+SL+ Y KC +D+ +F+++ RN+V+ A++ GY Q+
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQS 284
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 4/178 (2%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+ A +FDE+ + T +I G+ + C + + +F ML S + PNE T +VL +
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ + GR++H K + N G+ L+DLYVK +EEA F NV ++
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDM 235
TA++ G+ G DA +F+ M +V V++ A++ C+ G EE F+ M
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 193 RFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNF--FIDMLREGFIPTESTFPSV 250
+F A ++ ++ ++ W++++G S ++F + M R G IP+ TFP +
Sbjct: 51 QFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPL 110
Query: 251 ITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
+ A K+ +FHA +K D FV NSLIS Y+ G + + +F+ +++
Sbjct: 111 LKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDV 169
Query: 311 VSCNAVVCGYAQNG 324
V+ A++ G+ +NG
Sbjct: 170 VTWTAMIDGFVRNG 183
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 126/233 (54%), Gaps = 3/233 (1%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN--VVIGRQLHACATKIGLASN-VFVGS 151
+A FS M + + PN TF +L + +G LH A K+GL N V VG+
Sbjct: 54 EAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGT 113
Query: 152 ALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVS 211
A++ +Y K ++A+ F + N V++ ++ GY++ G+ ++A ++F +MPER+++S
Sbjct: 114 AIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLIS 173
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI 271
W AM+ G + G+ EEA+ +F +M G P + + A + AL G H +
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
K +V V NSLI Y +CG +E + +F + KR +VS N+V+ G+A NG
Sbjct: 234 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANG 286
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 38/280 (13%)
Query: 42 KHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFS 101
+ +N+V +I + A MFD++ + S T +I GF K+ E+A+ F
Sbjct: 136 EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFR 195
Query: 102 RMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLS 161
M S ++P+ L++ T L + G +H +NV V ++L+DLY +
Sbjct: 196 EMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCG 255
Query: 162 TIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQ 221
+E A+ QVF+ M +R VVSWN+++ G +
Sbjct: 256 CVEFAR-------------------------------QVFYNMEKRTVVSWNSVIVGFAA 284
Query: 222 TGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFV 281
G+ E++ +F M +GF P TF +TA + + + G R+ +KC ++ +
Sbjct: 285 NGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI-MKCDYRISPRI 343
Query: 282 GN--SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
+ L+ Y++ G +ED+L KL++ + N VV G
Sbjct: 344 EHYGCLVDLYSRAGRLEDAL----KLVQSMPMKPNEVVIG 379
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 198 LQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKI 257
+Q ++ VSW + + ++ G EA F DM G P TF ++++
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDF 84
Query: 258 --AALGMGKRFHACAIKC-LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCN 314
+ +G H A K L + V VG ++I Y+K G + + L+F+ + +N V+ N
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 315 AVVCGYAQNGR 325
++ GY ++G+
Sbjct: 145 TMIDGYMRSGQ 155
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 138/275 (50%), Gaps = 32/275 (11%)
Query: 52 IIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKR-HCHEDAIHLFSRMLASKIRP 110
+IP ++ F + +F + S +I G + HE A+ L+ RM S ++P
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP 130
Query: 111 NEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF 170
++FT+ V + L + +GR +H+ K+GL +V + +L+ +Y K
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAK----------- 179
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVN 230
CG + R ++F E+ ER+ VSWN+M+ G S+ G+ ++A++
Sbjct: 180 ---------------CGQVGYAR-----KLFDEITERDTVSWNSMISGYSEAGYAKDAMD 219
Query: 231 FFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYA 290
F M EGF P E T S++ A + + L G+ AI L F+G+ LIS Y
Sbjct: 220 LFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYG 279
Query: 291 KCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
KCG ++ + +FN+++K++ V+ A++ Y+QNG+
Sbjct: 280 KCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGK 314
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 130/262 (49%), Gaps = 35/262 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDEI++ S ++I G+++ +DA+ LF +M P+E T ++L + +
Sbjct: 186 ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 125 LRNVVIGRQLH--ACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
L ++ GR L A KIGL++ F+GS L+ +Y K
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLST--FLGSKLISMYGK----------------------- 280
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
CG L R +VF++M +++ V+W AM+ SQ G + EA F +M + G P
Sbjct: 281 ---CGDLDSAR-----RVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSP 332
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
T +V++A + AL +GK+ A + + +++V L+ Y KCG +E++L +F
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 392
Query: 303 NKLLKRNIVSCNAVVCGYAQNG 324
+ +N + NA++ YA G
Sbjct: 393 EAMPVKNEATWNAMITAYAHQG 414
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
+AQ + PN + A+ G F +F E N S+N M+ G + T +
Sbjct: 57 QAQMLLHSVEKPNFLIPKAVELGDFNYSSF-----LFSVTEEPNHYSFNYMIRGLTNTWN 111
Query: 225 NEEA-VNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN 283
+ EA ++ + M G P + T+ V A AK+ +G+G+ H+ K + DV + +
Sbjct: 112 DHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINH 171
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
SLI YAKCG + + +F+++ +R+ VS N+++ GY++ G
Sbjct: 172 SLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAG 212
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I +++ +A LF M + + P+ T TVL + + + +G+Q+ A++
Sbjct: 303 TAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASE 362
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+ L N++V + L+D+Y K +EEA + F N ++ A++ Y +G ++AL +
Sbjct: 363 LSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLL 422
Query: 201 FHEM--PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITAAAKI 257
F M P + +++ ++ C G + +F +M G +P + ++I ++
Sbjct: 423 FDRMSVPPSD-ITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 481
Query: 258 AALGMGKRF 266
L F
Sbjct: 482 GMLDEAWEF 490
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 147/262 (56%), Gaps = 4/262 (1%)
Query: 65 ACHMFDE--ISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
A +FDE + DL S +I G+ K E AI+++ M + ++P++ T ++ S
Sbjct: 210 ARKVFDESPVRDLV--SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSC 267
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
++L ++ G++ + + GL + + +AL+D++ K I EA++ F + + +VS+T
Sbjct: 268 SMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWT 327
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
++ GY + G + + ++F +M E++VV WNAM+GG Q ++A+ F +M P
Sbjct: 328 TMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKP 387
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
E T ++A +++ AL +G H K L+V +G SL+ YAKCG++ ++L +F
Sbjct: 388 DEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVF 447
Query: 303 NKLLKRNIVSCNAVVCGYAQNG 324
+ + RN ++ A++ G A +G
Sbjct: 448 HGIQTRNSLTYTAIIGGLALHG 469
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 38/251 (15%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRML---ASKIRPNEFTFGTVLHSSTVLRNVVIGRQL- 134
S I GF++ +++ L+ +ML + RP+ FT+ + LR +G +
Sbjct: 120 SWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMIL 179
Query: 135 -HACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGR 193
H ++ L S+V + A + + G
Sbjct: 180 GHVLKLRLELVSHV---------------------------------HNASIHMFASCGD 206
Query: 194 FEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA 253
E+A +VF E P R++VSWN ++ G + G E+A+ + M EG P + T ++++
Sbjct: 207 MENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS 266
Query: 254 AAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSC 313
+ + L GK F+ + ++ + + N+L+ ++KCG + ++ +F+ L KR IVS
Sbjct: 267 CSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSW 326
Query: 314 NAVVCGYAQNG 324
++ GYA+ G
Sbjct: 327 TTMISGYARCG 337
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
V+ +FD++ + +I G + +DA+ LF M S +P+E T L +
Sbjct: 339 LDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA 398
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ L + +G +H K L+ NV +G++L+D+Y K
Sbjct: 399 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKC--------------------- 437
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
G +AL VFH + RN +++ A++GG + G A+++F +M+ G
Sbjct: 438 ----------GNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA 487
Query: 242 PTESTFPSVITAAAKIAALGMGKRF 266
P E TF +++A + G+ +
Sbjct: 488 PDEITFIGLLSACCHGGMIQTGRDY 512
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 189 LKRGRFED-ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI---PTE 244
L R+ D ++++ + N+ SWN + G S++ + +E+ + MLR G P
Sbjct: 97 LSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDH 156
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T+P + A + +G +K +L V N+ I +A CG ME++ +F++
Sbjct: 157 FTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE 216
Query: 305 LLKRNIVSCNAVVCGYAQNGRG 326
R++VS N ++ GY + G
Sbjct: 217 SPVRDLVSWNCLINGYKKIGEA 238
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 42/304 (13%)
Query: 28 ITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHM-----FDEISDLTGESATT 82
+TK +H E +V K I Y F+ C + FD +S + T
Sbjct: 173 VTKMIHALAILSGYDKEISVGNKLITSY------FKCGCSVSGRGVFDGMSHRNVITLTA 226
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I G + HED + LFS M + PN T+ + L + + + +V G+Q+HA K G
Sbjct: 227 VISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYG 286
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
+ S + + SAL+D+Y K CG + EDA +F
Sbjct: 287 IESELCIESALMDMYSK--------------------------CGSI-----EDAWTIFE 315
Query: 203 EMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGM 262
E + VS ++ G +Q G EEA+ FFI ML+ G + +V+ + +LG+
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 263 GKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
GK+ H+ IK + FV N LI+ Y+KCG + DS +F ++ KRN VS N+++ +A+
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 323 NGRG 326
+G G
Sbjct: 436 HGHG 439
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 5/211 (2%)
Query: 61 TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
+ + A +F+ +++ S T I+ G A+ E+AI F RML + + + VL
Sbjct: 306 SIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG 365
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
S + ++ +G+QLH+ K + N FV + L+++Y K + ++Q F N VS
Sbjct: 366 VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS 425
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDML 236
+ +++ + + G AL+++ EM V V++ +++ CS G ++ +M
Sbjct: 426 WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMK 485
Query: 237 R-EGFIPTESTFPSVITAAAKIAALGMGKRF 266
G P + +I + L K F
Sbjct: 486 EVHGIEPRTEHYTCIIDMLGRAGLLKEAKSF 516
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 34/261 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDE+ S + GF + E L RML S + T VL
Sbjct: 109 AIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDT 167
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
++ + +HA A G + VG+ L+ Y K + F H NV++ TA+
Sbjct: 168 PEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAV 227
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PT 243
+ G ++ ED L++F ++R G + P
Sbjct: 228 ISGLIENELHEDGLRLF--------------------------------SLMRRGLVHPN 255
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
T+ S + A + + G++ HA K + ++ + ++L+ Y+KCGS+ED+ +F
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
Query: 304 KLLKRNIVSCNAVVCGYAQNG 324
+ + VS ++ G AQNG
Sbjct: 316 STTEVDEVSMTVILVGLAQNG 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVN 230
D +V + +L+ Y K G+ DA+++F EMP R+V+S N + G + E
Sbjct: 83 ADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFV 142
Query: 231 FFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYA 290
ML G +T V++ + K HA AI ++ VGN LI+ Y
Sbjct: 143 LLKRMLGSGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYF 201
Query: 291 KCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
KCG +F+ + RN+++ AV+ G +N
Sbjct: 202 KCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 149/295 (50%), Gaps = 5/295 (1%)
Query: 44 ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM 103
+N + ++I +D A +FDE+S+ + TT++ G+ AI L+ RM
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
Query: 104 LASKIRP-NEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLST 162
L S+ NEF + VL + ++ ++ +G ++ K L +V + ++++D+YVK
Sbjct: 98 LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 163 IEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQT 222
+ EA +F + P+ S+ L+ GY K G ++A+ +FH MP+ NVVSWN ++ G
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
G + A+ F + M REG + P + A + L MGK+ H C +K + F
Sbjct: 218 G-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAI 276
Query: 283 NSLISFYAKCGSMEDSLLMFNK---LLKRNIVSCNAVVCGYAQNGRGGFTSWATL 334
++LI Y+ CGS+ + +F++ + ++ N+++ G+ N W L
Sbjct: 277 SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLL 331
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 119/245 (48%), Gaps = 31/245 (12%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+++ GF +E A+ L ++ S + + +T L N+ +G Q+H+
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVV 370
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G + VGS L+DL H NV G +DA ++
Sbjct: 371 SGYELDYIVGSILVDL------------------HANV-------------GNIQDAHKL 399
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
FH +P +++++++ ++ GC ++G N A F ++++ G + +++ + +A+L
Sbjct: 400 FHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASL 459
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
G GK+ H IK + + +L+ Y KCG +++ +++F+ +L+R++VS ++ G+
Sbjct: 460 GWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGF 519
Query: 321 AQNGR 325
QNGR
Sbjct: 520 GQNGR 524
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+ +I G K + A +LF ++ + ++F +L + L ++ G+Q+H K
Sbjct: 412 SGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIK 471
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G S +AL+D+YVK I+ F +VVS+T ++ G+ + GR E+A +
Sbjct: 472 KGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRY 531
Query: 201 FHEM----PERNVVSWNAMVGGCSQTGHNEEA 228
FH+M E N V++ ++ C +G EEA
Sbjct: 532 FHKMINIGIEPNKVTFLGLLSACRHSGLLEEA 563
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 131 GRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLK 190
G + A K G++ NVF+ + ++ +YV + +A K F + N+V++T +V GY
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 191 RGRFEDALQVFHEMPER-----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
G+ A++++ M + N ++A++ C G + + + + +E
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 246 TFPSVITAAAKIAALGMGKRFHA-CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
SV+ K G+ A + K + + N+LIS Y K G M++++ +F++
Sbjct: 144 LMNSVVDMYVK-----NGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHR 198
Query: 305 LLKRNIVSCNAVVCGYAQNG 324
+ + N+VS N ++ G+ G
Sbjct: 199 MPQPNVVSWNCLISGFVDKG 218
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 112/289 (38%), Gaps = 64/289 (22%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM--------------LASKIRPNEFT 114
F EI + S T+I G+ K ++A+ LF RM K P
Sbjct: 165 FKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALE 224
Query: 115 FGTVLHSSTVLRN----------------VVIGRQLHACATKIGLASNVFVGSALLDLYV 158
F + ++ + + +G+QLH C K GL S+ F SAL+D+Y
Sbjct: 225 FLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYS 284
Query: 159 KLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP---ERNVVSWNAM 215
CG L A VFH+ +V WN+M
Sbjct: 285 N--------------------------CGSLIY-----AADVFHQEKLAVNSSVAVWNSM 313
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG 275
+ G NE A+ + + + T + L +G + H+ +
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 276 KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+LD VG+ L+ +A G+++D+ +F++L ++I++ + ++ G ++G
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 146/272 (53%), Gaps = 10/272 (3%)
Query: 65 ACHMFDEI--SDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
A +FDEI S+ TT++ F++ +++ LF M ++ ++ + +
Sbjct: 62 AQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVC 121
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
L ++ +Q H A K+G+ ++V V +AL+D+Y K + E ++ F + + +VVS+T
Sbjct: 122 AKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWT 181
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML-REGFI 241
++ +K E +VFHEMPERN V+W MV G G E + +M+ R G
Sbjct: 182 VVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHG 241
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIK---CLGKL----DVFVGNSLISFYAKCGS 294
T S+++A A+ L +G+ H A+K +G+ DV VG +L+ YAKCG+
Sbjct: 242 LNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGN 301
Query: 295 MEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
++ S+ +F + KRN+V+ NA+ G A +G+G
Sbjct: 302 IDSSMNVFRLMRKRNVVTWNALFSGLAMHGKG 333
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 34/256 (13%)
Query: 67 HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEF-TFGTVLHSSTVL 125
+F E+ + + T ++ G+ + + L + M+ F T ++L +
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQS 257
Query: 126 RNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALV 185
N+V+GR +H A K + +G EEA + +V+ TALV
Sbjct: 258 GNLVVGRWVHVYALK----KEMMMG-------------EEAS-------YDDVMVGTALV 293
Query: 186 CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
Y K G + ++ VF M +RNVV+WNA+ G + G ++ F M+RE P +
Sbjct: 294 DMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDL 352
Query: 246 TFPSVITAAAKIAALGMGKR-FHACAIKCL-GKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
TF +V++A + + G R FH+ L K+D + ++ + G +E++ +
Sbjct: 353 TFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYA--CMVDLLGRAGLIEEAEI--- 407
Query: 304 KLLKRNIVSCNAVVCG 319
L++ V N VV G
Sbjct: 408 -LMREMPVPPNEVVLG 422
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 142/265 (53%), Gaps = 1/265 (0%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHS 121
Q A +F+++ + + +I + H +A+ LF M+ S + + ++FTF V+ +
Sbjct: 69 QYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKA 128
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
++ +G Q+H A K G ++VF + L+DLY K + +K F ++VS+
Sbjct: 129 CLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSW 188
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
T ++ G + + + A VF++MP RNVVSW AM+ + +EA F M +
Sbjct: 189 TTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVK 248
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P E T +++ A+ ++ +L MG+ H A K LD F+G +LI Y+KCGS++D+ +
Sbjct: 249 PNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKV 308
Query: 302 FNKLLKRNIVSCNAVVCGYAQNGRG 326
F+ + +++ + N+++ +G G
Sbjct: 309 FDVMQGKSLATWNSMITSLGVHGCG 333
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T +I + K ++A LF RM ++PNEFT +L +ST L ++ +GR +H A
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K G + F+G+AL+D+Y K ++++A+K F Q ++ ++ +++ G E+AL
Sbjct: 278 HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEAL 337
Query: 199 QVFHEMP-----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
+F EM E + +++ ++ C+ TG+ ++ + +F M++
Sbjct: 338 SLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 5/319 (1%)
Query: 10 SRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPT-TFQVACHM 68
S L + + HQ S + K +HT +L E V + + L + A
Sbjct: 6 SSLVAKSILRHQCKSMSELYK-IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKF 64
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
++SD +I GF+ E +I ++ +ML + P+ T+ ++ SS+ L N
Sbjct: 65 LSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNR 124
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
+G LH K GL ++F+ + L+ +Y A+K F + H N+V++ +++ Y
Sbjct: 125 KLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY 184
Query: 189 LKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP-TESTF 247
K G A VF EM ER+VV+W++M+ G + G +A+ F M+R G E T
Sbjct: 185 AKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTM 244
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK--L 305
SVI A A + AL GK H + L V + SLI YAKCGS+ D+ +F + +
Sbjct: 245 VSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASV 304
Query: 306 LKRNIVSCNAVVCGYAQNG 324
+ + + NA++ G A +G
Sbjct: 305 KETDALMWNAIIGGLASHG 323
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 104/221 (47%), Gaps = 7/221 (3%)
Query: 43 HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSR 102
H+N V I+ A +FDE+S+ + +++I G+ KR + A+ +F +
Sbjct: 171 HKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQ 230
Query: 103 ML-ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLS 161
M+ + NE T +V+ + L + G+ +H + L V + ++L+D+Y K
Sbjct: 231 MMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 290
Query: 162 TIEEAQKAF--GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAM 215
+I +A F + + + + A++ G G ++LQ+FH+M E + +++ +
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 350
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
+ CS G +EA +FF + G P + ++ ++
Sbjct: 351 LAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSR 391
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 121/246 (49%), Gaps = 33/246 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
I+ + + DAI ++ M+ S + P+ ++ V+ ++ + + +G++LH+ A +
Sbjct: 86 NNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVR 145
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+G + F S + LY K G FE+A +V
Sbjct: 146 LGFVGDEFCESGFITLYCKA-------------------------------GEFENARKV 174
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F E PER + SWNA++GG + G EAV F+DM R G P + T SV + + L
Sbjct: 175 FDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDL 234
Query: 261 GMGKRFHACAI--KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
+ + H C + K K D+ + NSLI Y KCG M+ + +F ++ +RN+VS ++++
Sbjct: 235 SLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIV 294
Query: 319 GYAQNG 324
GYA NG
Sbjct: 295 GYAANG 300
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F+ A +FDE + S II G +A+ +F M S + P++FT +V S
Sbjct: 168 FENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTAS 227
Query: 122 STVLRNVVIGRQLHACA--TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
L ++ + QLH C K S++ + ++L+D+Y K ++ A F + + NVV
Sbjct: 228 CGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV 287
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMPE----RNVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
S+++++ GY G +AL+ F +M E N +++ ++ C G EE +F M
Sbjct: 288 SWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMM 347
Query: 236 LRE 238
E
Sbjct: 348 KSE 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%)
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI 271
WN ++ + +A+ ++ M+R +P + P VI AA +I +GK H+ A+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+ D F + I+ Y K G E++ +F++ +R + S NA++ G GR
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 31/262 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDEI + S +II GF + +A LF M TF +L +S
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAG 236
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L ++ +G+QLH CA K+G+ N FV L+D+Y K
Sbjct: 237 LGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKC------------------------ 272
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
G EDA F MPE+ V+WN ++ G + G++EEA+ DM G +
Sbjct: 273 -------GDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQ 325
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T +I + K+A L + K+ HA I+ + ++ +L+ FY+K G ++ + +F+K
Sbjct: 326 FTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDK 385
Query: 305 LLKRNIVSCNAVVCGYAQNGRG 326
L ++NI+S NA++ GYA +GRG
Sbjct: 386 LPRKNIISWNALMGGYANHGRG 407
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 10/193 (5%)
Query: 137 CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFG----DTQHPNVVSYTALVCGYLKRG 192
C+ K+G+++ AL++ ++L +I ++ +G + P ++ ++K G
Sbjct: 117 CSFKVGVSTY----DALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCG 172
Query: 193 RFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
DA ++F E+PERN+ S+ +++ G G+ EA F M E TF ++
Sbjct: 173 MIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLR 232
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLD-VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
A+A + ++ +GK+ H CA+K LG +D FV LI Y+KCG +ED+ F + ++ V
Sbjct: 233 ASAGLGSIYVGKQLHVCALK-LGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTV 291
Query: 312 SCNAVVCGYAQNG 324
+ N V+ GYA +G
Sbjct: 292 AWNNVIAGYALHG 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
F+ + + T + +I G+A E+A+ L M S + ++FT ++ ST L +
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
+ +Q HA + G S + +AL+D Y K ++ A+ F N++S+ AL+ GY
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 189 LKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDM 235
GR DA+++F +M NV V++ A++ C+ +G +E+ F+ M
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM 452
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 138/259 (53%), Gaps = 1/259 (0%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD S+ ++I G+ + +A+ LF+ M ++ R + T V+++ L
Sbjct: 275 LFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGF 333
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ G+Q+H A K GL ++ V S LLD+Y K + EA K F + + + + +++
Sbjct: 334 LETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKV 393
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y GR +DA +VF + ++++SWN+M G SQ G E + +F M + E +
Sbjct: 394 YFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSL 453
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
SVI+A A I++L +G++ A A D V +SLI Y KCG +E +F+ ++K
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 308 RNIVSCNAVVCGYAQNGRG 326
+ V N+++ GYA NG+G
Sbjct: 514 SDEVPWNSMISGYATNGQG 532
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 4/264 (1%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
VA +F+ + + + +++ G+ E+A+ LF + + T TVL +
Sbjct: 140 LSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKA 196
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L + G+Q+HA G+ + + S+L+++Y K + A + P+ S
Sbjct: 197 CAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSL 256
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
+AL+ GY GR ++ +F R V+ WN+M+ G EA+ F +M R
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETR 315
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
T +VI A + L GK+ H A K D+ V ++L+ Y+KCGS ++ +
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 302 FNKLLKRNIVSCNAVVCGYAQNGR 325
F+++ + + N+++ Y GR
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGR 399
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 35/240 (14%)
Query: 118 VLHSSTVLRNVVIGRQLHACATKIG-LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP 176
+L S + + RQ + K G L+S V V + LL +Y + + A+ F +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQ--------------- 221
N S+ ++ GY+ G +L+ F MPER+ SWN +V G ++
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 222 ----------------TGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
G+ EEA+ F ++ F T +V+ A A++ AL GK+
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQ 208
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
HA + + D + +SL++ YAKCG + + M ++ + + S +A++ GYA GR
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
+T++ +I A +F+ I + + S ++ GF++ C + + F +M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
+ +E + +V+ + + ++ +G Q+ A AT +GL S+ V S+L+DLY K
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCK----- 497
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
CG+++ GR +VF M + + V WN+M+ G + G
Sbjct: 498 ---------------------CGFVEHGR-----RVFDTMVKSDEVPWNSMISGYATNGQ 531
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRF 266
EA++ F M G PT+ TF V+TA + G++
Sbjct: 532 GFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 108 IRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQ 167
+RP++F F ++ + L ++ GRQ+H A++ V S+L+D+Y K + A+
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 168 KAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEE 227
F + N +S+TA+V GY K GR E+AL++F +P +N+ SW A++ G Q+G E
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 228 AVNFFIDMLREGF-IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLI 286
A + F +M RE I S++ A A +AA G++ H I VF+ N+LI
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 287 SFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
YAKC + + +F+++ R++VS +++ G AQ+G+
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQA 320
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRP-NEFTFGTVLHSSTVLRNVVIGRQLHAC 137
S T +I GF + +A +F+ M ++ + +++ + L + GRQ+H
Sbjct: 204 SWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGL 263
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDA 197
+G S VF+ +AL+D+Y K S + A+ F +H +VVS+T+L+ G + G+ E A
Sbjct: 264 VIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKA 323
Query: 198 LQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPT 243
L ++ +M + N V++ ++ CS G E+ F M ++ G P+
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 32/175 (18%)
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-P 242
LV Y K G ALQVF EMP R+ ++W +++ +Q + + ++ F + + P
Sbjct: 44 LVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRP 103
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSM------- 295
+ F +++ A A + ++ G++ H I D V +SL+ YAKCG +
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 296 ------------------------EDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
E++L +F L +N+ S A++ G+ Q+G+G
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 218
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 31/261 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD + + S TI+ G+++ A+ + M ++P+ T +VL + +
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
LR + +G+++H A + G S V + +AL+D+Y K
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK------------------------- 283
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
CG L E A Q+F M ERNVVSWN+M+ Q + +EA+ F ML EG PT+
Sbjct: 284 -CGSL-----ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
+ + A A + L G+ H +++ +V V NSLIS Y KC ++ + MF K
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 305 LLKRNIVSCNAVVCGYAQNGR 325
L R +VS NA++ G+AQNGR
Sbjct: 398 LQSRTLVSWNAMILGFAQNGR 418
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 31/259 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +F+ I T++ GFAK + A+ F RM + P + F +L
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ +G+++H K G + ++F + L ++Y K + EA+K
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARK---------------- 191
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
VF MPER++VSWN +V G SQ G A+ M E P+
Sbjct: 192 ---------------VFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSF 236
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T SV+ A + + + +GK H A++ V + +L+ YAKCGS+E + +F+
Sbjct: 237 ITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDG 296
Query: 305 LLKRNIVSCNAVVCGYAQN 323
+L+RN+VS N+++ Y QN
Sbjct: 297 MLERNVVSWNSMIDAYVQN 315
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQK----AFGDTQHPNVVSYTALVCG 187
R H + + + +NV+ A L L + S+++E ++ F + + T LV
Sbjct: 20 RHRHFLSERNYIPANVYEHPAAL-LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSL 78
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
+ + G ++A +VF + + V ++ M+ G ++ ++A+ FF+ M + P F
Sbjct: 79 FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNF 138
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
++ A L +GK H +K LD+F L + YAKC + ++ +F+++ +
Sbjct: 139 TYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE 198
Query: 308 RNIVSCNAVVCGYAQNG 324
R++VS N +V GY+QNG
Sbjct: 199 RDLVSWNTIVAGYSQNG 215
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A MF ++ T S +I GFA+ DA++ FS+M + ++P+ FT+ +V+ +
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L + +H + L NVFV +AL+D+Y K I A+ F +V ++ A+
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 185 VCGYLKRGRFEDALQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+ GY G + AL++F EM + N V++ +++ CS +G E + F M++E +
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFY-MMKENY 569
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 142/283 (50%), Gaps = 36/283 (12%)
Query: 44 ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM 103
E+ + I+P+G+D +F+ + S TII G+A+ +EDA+ + M
Sbjct: 179 EDVKAETCIMPFGIDSVR-----RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM 233
Query: 104 LASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTI 163
+ ++P+ FT +VL + +V+ G+++H + G+ S+V++GS+L+D+Y K
Sbjct: 234 GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK---- 289
Query: 164 EEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTG 223
R ED+ +VF + R+ +SWN++V G Q G
Sbjct: 290 ---------------------------SARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 224 HNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN 283
EA+ F M+ P F SVI A A +A L +GK+ H ++ ++F+ +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+L+ Y+KCG+++ + +F+++ + VS A++ G+A +G G
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 130/254 (51%), Gaps = 15/254 (5%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
++I F + A+ F M AS P+ F +VL S T++ ++ G +H ++
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 142 GLASNVFVGSALLDLYVKL----------STIEEAQKAFGDTQHPNVVSYTALVCGYLKR 191
G+ +++ G+AL+++Y KL + +E + ++ +V + T ++ +
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS 194
Query: 192 GRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
R +VF MP ++VVS+N ++ G +Q+G E+A+ +M P T SV+
Sbjct: 195 VR-----RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 252 TAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
++ + GK H I+ DV++G+SL+ YAK +EDS +F++L R+ +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 312 SCNAVVCGYAQNGR 325
S N++V GY QNGR
Sbjct: 310 SWNSLVAGYVQNGR 323
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
Query: 77 GESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHA 136
G S +++ G+ + + +A+ LF +M+ +K++P F +V+ + L + +G+QLH
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 137 CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFED 196
+ G SN+F+ SAL+D+Y K I+ A+K F + VS+TA++ G+ G +
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
A+ +F EM + N V++ A++ CS G +EA +F M +
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 472
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 161 STIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCS 220
S ++ F TQ + S + ++ Y +AL +F + V++W +++ +
Sbjct: 22 SQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 221 QTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVF 280
+A+ F++M G P + FPSV+ + + L G+ H ++ D++
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 281 VGNSLISFYAK---------CGSMEDSL---------------------------LMFNK 304
GN+L++ YAK G++ D + +F
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 305 LLKRNIVSCNAVVCGYAQNG 324
+ ++++VS N ++ GYAQ+G
Sbjct: 202 MPRKDVVSYNTIIAGYAQSG 221
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 140/268 (52%), Gaps = 4/268 (1%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM-LASKIRPNEFTFGTVLH 120
++ +FDE+ S +I + EDAI +F RM S ++ +E T + L
Sbjct: 97 IEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLS 156
Query: 121 SSTVLRNVVIGRQLHA-CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
+ + L+N+ IG +++ T+ ++ V +G+AL+D++ K +++A+ F + NV
Sbjct: 157 ACSALKNLEIGERIYRFVVTEFEMS--VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG 239
+T++V GY+ GR ++A +F P ++VV W AM+ G Q +EA+ F M G
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAG 274
Query: 240 FIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSL 299
P S++T A+ AL GK H + +D VG +L+ YAKCG +E +L
Sbjct: 275 IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETAL 334
Query: 300 LMFNKLLKRNIVSCNAVVCGYAQNGRGG 327
+F ++ +R+ S +++ G A NG G
Sbjct: 335 EVFYEIKERDTASWTSLIYGLAMNGMSG 362
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 97 IHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDL 156
+ LF + + P+ FT VL S LR V+ G ++H A K GL + +V ++L+ +
Sbjct: 31 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM 90
Query: 157 YVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMV 216
Y L IE K F + +VVS+ L+ Y+ GRFEDA+ VF M + + + ++
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFD--- 147
Query: 217 GGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGK 276
E T S ++A + + L +G+R + + +
Sbjct: 148 ---------------------------EGTIVSTLSACSALKNLEIGERIYRFVVTEF-E 179
Query: 277 LDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+ V +GN+L+ + KCG ++ + +F+ + +N+ ++V GY GR
Sbjct: 180 MSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGR 228
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%)
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFH 267
+++ +N M+ + + + F ++ +G P T P V+ + ++ + G++ H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 268 ACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
A+K + D +V NSL+ YA G +E + +F+++ +R++VS N ++ Y NGR
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGR 127
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 32/189 (16%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T ++ G+ + + ++A+ LF M + IRP+ F ++L + G+ +H +
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+ + VG+AL+D+Y K CG + E AL+V
Sbjct: 308 NRVTVDKVVGTALVDMYAK--------------------------CGCI-----ETALEV 336
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F+E+ ER+ SW +++ G + G + A++ + +M G TF +V+TA +
Sbjct: 337 FYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFV 396
Query: 261 GMGKR-FHA 268
G++ FH+
Sbjct: 397 AEGRKIFHS 405
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 156/337 (46%), Gaps = 35/337 (10%)
Query: 23 VSCRYITKTVHTHYHSLATKH---ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGES 79
VS Y ++ H TKH NT + ++ + + + A +FDE+ D S
Sbjct: 64 VSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVIS 123
Query: 80 ATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACAT 139
+++ G+ + ++ I LF + S + PNEF+F L + L +G +H+
Sbjct: 124 WNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLV 183
Query: 140 KIGLAS-NVFVGSALLDLYVKLSTIEEAQKAFGDTQ------------------------ 174
K+GL NV VG+ L+D+Y K +++A F +
Sbjct: 184 KLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGL 243
Query: 175 -------HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEE 227
+P+ V+Y L+ ++K G F +A QV +MP N SWN ++ G + + E
Sbjct: 244 WFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGE 303
Query: 228 AVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLIS 287
A FF M G E + V+ A A +A + G HACA K V V ++LI
Sbjct: 304 ATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALID 363
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
Y+KCG ++ + LMF + ++N++ N ++ GYA+NG
Sbjct: 364 MYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNG 400
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 32/224 (14%)
Query: 109 RPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQK 168
+P+ +L S V + RQLH TK G SN + ++L+ Y ++E+A K
Sbjct: 52 KPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHK 111
Query: 169 AFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEA 228
VF EMP+ +V+SWN++V G Q+G +E
Sbjct: 112 -------------------------------VFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 229 VNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC-LGKLDVFVGNSLIS 287
+ F+++ R P E +F + + A A++ +G H+ +K L K +V VGN LI
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFTSW 331
Y KCG M+D++L+F + +++ VS NA+V ++NG+ W
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLW 244
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
+TV ++I + F A + ++ + S TI+ G+ +A F++M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
+S +R +E++ VL + L V G +HACA K+GL S V V SAL+D+Y K ++
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLK 372
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER 207
A+ F N++ + ++ GY + G +A+++F+++ +
Sbjct: 373 HAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 31/284 (10%)
Query: 39 LATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIH 98
+ ++ + ++Q ++ + + + A +FDE+S+L S TT+I +A++ + A+
Sbjct: 111 MGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG 170
Query: 99 LFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYV 158
LFS MLAS +P + T+L S R + GRQ+HA + GL SN + + ++++YV
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230
Query: 159 KLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGG 218
K + A++ F V+ T L+ GY + GR DAL++
Sbjct: 231 KCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKL------------------ 272
Query: 219 CSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLD 278
F+D++ EG F V+ A A + L +GK+ HAC K + +
Sbjct: 273 -------------FVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 279 VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
V VG L+ FY KC S E + F ++ + N VS +A++ GY Q
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 138/280 (49%), Gaps = 30/280 (10%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
NT ++ I+ + A +FD+++ + T ++ G+ + DA+ LF ++
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
+ + F F VL + L + +G+Q+HAC K+GL S V VG+ L+D Y+K S+ E
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFE 337
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
A +AF + + PN VS++A++ GY + +FE+A++ F + +N N+
Sbjct: 338 SACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF--------- 388
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNS 284
T+ S+ A + +A +G + HA AIK + ++
Sbjct: 389 ---------------------TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA 427
Query: 285 LISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
LI+ Y+KCG ++D+ +F + +IV+ A + G+A G
Sbjct: 428 LITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%)
Query: 174 QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFI 233
++P+V+ ++ Y + EDA ++F EM E N VS M+ ++ G ++AV F
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS 173
Query: 234 DMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCG 293
ML G P S + +++ + AL G++ HA I+ + + +++ Y KCG
Sbjct: 174 GMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Query: 294 SMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+ + +F+++ + V+C ++ GY Q GR
Sbjct: 234 WLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRA 266
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 145/281 (51%), Gaps = 1/281 (0%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
+ V +I Y + A +FDE+S+ S ++I G+++ ED ++ ML
Sbjct: 166 DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAML 225
Query: 105 A-SKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTI 163
A S +PN T +V + +++ G ++H + + ++ + +A++ Y K ++
Sbjct: 226 ACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSL 285
Query: 164 EEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTG 223
+ A+ F + + V+Y A++ GY+ G ++A+ +F EM + +WNAM+ G Q
Sbjct: 286 DYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNN 345
Query: 224 HNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN 283
H+EE +N F +M+R G P T S++ + + L GK HA AI+ +++V
Sbjct: 346 HHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTT 405
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
S+I YAK G + + +F+ R++++ A++ YA +G
Sbjct: 406 SIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHG 446
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 138/302 (45%), Gaps = 40/302 (13%)
Query: 32 VHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRH 91
+H + K +N + K +I + F+ A H+FDEI+ S ++ + R
Sbjct: 44 LHARIVVFSIKPDNFLASK-LISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 92 CHEDAIHLFSRMLASK------IRPNEFTFGTVLHSSTVLRNVVIG---RQLHACATKIG 142
+ DA LF + S RP+ + VL + + + +G RQ+H + G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
S+VFVG+ ++ Y K IE A+K F + +VVS+ +++ GY + G FED +++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 203 EMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGM 262
M CS F P T SV A + + L
Sbjct: 223 AML------------ACSD------------------FKPNGVTVISVFQACGQSSDLIF 252
Query: 263 GKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
G H I+ ++D+ + N++I FYAKCGS++ + +F+++ +++ V+ A++ GY
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA 312
Query: 323 NG 324
+G
Sbjct: 313 HG 314
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 105/202 (51%), Gaps = 10/202 (4%)
Query: 45 NTVVQKDIIPYGLDPTTF------QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIH 98
+ + +KD + YG + + + A +F E+ + + +I G + + HE+ I+
Sbjct: 293 DEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVIN 352
Query: 99 LFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYV 158
F M+ RPN T ++L S T N+ G+++HA A + G +N++V ++++D Y
Sbjct: 353 SFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYA 412
Query: 159 KLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP----ERNVVSWNA 214
KL + AQ+ F + + +++++TA++ Y G + A +F +M + + V+ A
Sbjct: 413 KLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTA 472
Query: 215 MVGGCSQTGHNEEAVNFFIDML 236
++ + +G ++ A + F ML
Sbjct: 473 VLSAFAHSGDSDMAQHIFDSML 494
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 139/279 (49%), Gaps = 33/279 (11%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASK-IRPNEFTFGTVLHSSTVLRNVVIGRQLHACAT 139
T++ G+++ +++ +F M+ + P+ F+F V+ + R++ G Q+H A
Sbjct: 74 NTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQAL 133
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALV-------------- 185
K GL S++FVG+ L+ +Y +E A+K F + PN+V++ A++
Sbjct: 134 KHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGARE 193
Query: 186 -----------------CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEA 228
GY+K G E A ++F EMP R+ VSW+ M+ G + G E+
Sbjct: 194 IFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNES 253
Query: 229 VNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISF 288
+F ++ R G P E + V++A ++ + GK H K V V N+LI
Sbjct: 254 FLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDM 313
Query: 289 YAKCGSMEDSLLMFNKLL-KRNIVSCNAVVCGYAQNGRG 326
Y++CG++ + L+F + KR IVS +++ G A +G+G
Sbjct: 314 YSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQG 352
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+ A +F E+ S +T+I G A ++ F + + + PNE + VL +
Sbjct: 219 LESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSA 278
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN-VVS 180
+ + G+ LH K G + V V +AL+D+Y + + A+ F Q +VS
Sbjct: 279 CSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVS 338
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDML 236
+T+++ G G+ E+A+++F+EM V +S+ +++ CS G EE ++F +M
Sbjct: 339 WTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMK 398
Query: 237 REGFIPTE 244
R I E
Sbjct: 399 RVYHIEPE 406
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIAALGMG 263
PE + +N +V G S++ +V F++M+R+GF+ P +F VI A +L G
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 264 KRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVV 317
+ H A+K + +FVG +LI Y CG +E + +F+++ + N+V+ NAV+
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 136/267 (50%), Gaps = 1/267 (0%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
N ++ ++ + VA +FDE + + + ++ +A+ +F+ M+
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
S +RP+ + + + S + LRN++ G+ H + G S + +AL+D+Y+K +
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
A + F + VV++ ++V GY++ G + A + F MPE+N+VSWN ++ G Q
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 225 NEEAVNFFIDML-REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN 283
EEA+ F M +EG T S+ +A + AL + K + K +LDV +G
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT 509
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNI 310
+L+ +++CG E ++ +FN L R++
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSLTNRDV 536
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 138/292 (47%), Gaps = 33/292 (11%)
Query: 44 ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM 103
++ VQ ++ + + A +FDE+S+ S T++ICG+A+R +DA+ LF RM
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 104 LAS-KIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLST 162
+ ++ PN T V+ + L ++ G +++A G+ N + SAL+D+Y+K +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 163 IEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQT 222
I+ A++ F + N+ A+ Y+++G +AL VF+
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL------------------- 327
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
M+ G P + S I++ +++ + GK H ++ + +
Sbjct: 328 ------------MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 283 NSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFTSWATL 334
N+LI Y KC + + +F+++ + +V+ N++V GY +NG +W T
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD-AAWETF 426
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 32/245 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
++I G+A +AI LF RM+ S I P+++TF L + R G Q+H K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+G A ++FV ++L+ Y + ++ A+K F + NVVS+T+++CGY +R +D
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD---- 218
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR-EGFIPTESTFPSVITAAAKIAA 259
AV+ F M+R E P T VI+A AK+
Sbjct: 219 ---------------------------AVDLFFRMVRDEEVTPNSVTMVCVISACAKLED 251
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
L G++ +A +++ + ++L+ Y KC +++ + +F++ N+ CNA+
Sbjct: 252 LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN 311
Query: 320 YAQNG 324
Y + G
Sbjct: 312 YVRQG 316
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 70/111 (63%)
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI 271
+N+++ G + +G EA+ F+ M+ G P + TFP ++A AK A G G + H +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
K D+FV NSL+ FYA+CG ++ + +F+++ +RN+VS +++CGYA+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 115/279 (41%), Gaps = 36/279 (12%)
Query: 43 HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSR 102
++ V I+ ++ A F+ + + S TII G + E+AI +F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 103 MLASK-IRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLS 161
M + + + + T ++ + L + + + ++ K G+ +V +G+ L+D++ +
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC- 518
Query: 162 TIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQ 221
G E A+ +F+ + R+V +W A +G +
Sbjct: 519 ------------------------------GDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 222 TGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG--KLDV 279
G+ E A+ F DM+ +G P F +TA + + GK +K G DV
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 280 FVGNSLISFYAKCGSMEDSLLMFNKL-LKRNIVSCNAVV 317
G ++ + G +E+++ + + ++ N V N+++
Sbjct: 609 HYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLL 646
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 130/250 (52%), Gaps = 1/250 (0%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
VA +FDE + + + ++ +A+ +F+ M+ S +RP+ + + + S
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ LRN++ G+ H + G S + +AL+D+Y+K + A + F + VV++
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML-REGF 240
++V GY++ G + A + F MPE+N+VSWN ++ G Q EEA+ F M +EG
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
T S+ +A + AL + K + K +LDV +G +L+ +++CG E ++
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 301 MFNKLLKRNI 310
+FN L R++
Sbjct: 527 IFNSLTNRDV 536
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 138/292 (47%), Gaps = 33/292 (11%)
Query: 44 ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM 103
++ VQ ++ + + A +FDE+S+ S T++ICG+A+R +DA+ LF RM
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 104 LAS-KIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLST 162
+ ++ PN T V+ + L ++ G +++A G+ N + SAL+D+Y+K +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 163 IEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQT 222
I+ A++ F + N+ A+ Y+++G +AL VF+
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL------------------- 327
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
M+ G P + S I++ +++ + GK H ++ + +
Sbjct: 328 ------------MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 283 NSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFTSWATL 334
N+LI Y KC + + +F+++ + +V+ N++V GY +NG +W T
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD-AAWETF 426
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 32/245 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
++I G+A +AI LF RM+ S I P+++TF L + R G Q+H K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+G A ++FV ++L+ Y + ++ A+K F + NVVS+T+++CGY +R +D
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD---- 218
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR-EGFIPTESTFPSVITAAAKIAA 259
AV+ F M+R E P T VI+A AK+
Sbjct: 219 ---------------------------AVDLFFRMVRDEEVTPNSVTMVCVISACAKLED 251
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
L G++ +A +++ + ++L+ Y KC +++ + +F++ N+ CNA+
Sbjct: 252 LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN 311
Query: 320 YAQNG 324
Y + G
Sbjct: 312 YVRQG 316
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 70/111 (63%)
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI 271
+N+++ G + +G EA+ F+ M+ G P + TFP ++A AK A G G + H +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
K D+FV NSL+ FYA+CG ++ + +F+++ +RN+VS +++CGYA+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 112/274 (40%), Gaps = 36/274 (13%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK-IRPNEFTFGTVLHS 121
A F+ + + S TII G + E+AI +F M + + + + T ++ +
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L + + + ++ K G+ +V +G+ L+D++ +
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC--------------------- 518
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
G E A+ +F+ + R+V +W A +G + G+ E A+ F DM+ +G
Sbjct: 519 ----------GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLG--KLDVFVGNSLISFYAKCGSMEDSL 299
P F +TA + + GK +K G DV G ++ + G +E+++
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAV 627
Query: 300 LMFNKL-LKRNIVSCNAVVCGYAQNGRGGFTSWA 332
+ + ++ N V N+++ G ++A
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYA 661
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 121/232 (52%), Gaps = 31/232 (13%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
+A+++F M IRP+ TF ++L +S L ++ + +Q+H K GL ++F GSAL+
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI 496
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNA 214
D+Y C LK R VF EM +++V WN+
Sbjct: 497 DVYSN--------------------------CYCLKDSRL-----VFDEMKVKDLVIWNS 525
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCL 274
M G Q NEEA+N F+++ P E TF +++TAA +A++ +G+ FH +K
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 275 GKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+ + ++ N+L+ YAKCGS ED+ F+ R++V N+V+ YA +G G
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 131/261 (50%), Gaps = 29/261 (11%)
Query: 64 VACH-MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
+A H +F+ + + S TT++ G+ + H++A+ LF+ M ++P+ + ++L S
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
L + G Q+HA K L ++ +V ++L+D+Y K + +A+K F +VV +
Sbjct: 361 ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
A++ GY + G W EA+N F DM P
Sbjct: 421 AMIEGYSRLG-----------------TQWEL-----------HEALNIFRDMRFRLIRP 452
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
+ TF S++ A+A + +LG+ K+ H K LD+F G++LI Y+ C ++DS L+F
Sbjct: 453 SLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVF 512
Query: 303 NKLLKRNIVSCNAVVCGYAQN 323
+++ +++V N++ GY Q
Sbjct: 513 DEMKVKDLVIWNSMFAGYVQQ 533
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 52 IIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPN 111
+I + L A +FD + + + + TT+I G K ++ LF +++ + P+
Sbjct: 189 LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPD 248
Query: 112 EFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFG 171
+ TVL + ++L + G+Q+HA + GL + + + L+D YVK
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVK------------ 296
Query: 172 DTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNF 231
CG R A ++F+ MP +N++SW ++ G Q ++EA+
Sbjct: 297 --------------CG-----RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMEL 337
Query: 232 FIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAK 291
F M + G P S++T+ A + ALG G + HA IK D +V NSLI YAK
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAK 397
Query: 292 CGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFTSW 331
C + D+ +F+ ++V NA++ GY++ G T W
Sbjct: 398 CDCLTDARKVFDIFAAADVVLFNAMIEGYSRLG----TQW 433
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FDE+ ++ G+ ++ +E+A++LF + S+ RP+EFTF ++ ++ L +
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLAS 570
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
V +G++ H K GL N ++ +ALLD+Y K + E+A KAF +VV + +++
Sbjct: 571 VQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISS 630
Query: 188 YLKRGRFEDALQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
Y G + ALQ+ +M E N +++ ++ CS G E+ + F MLR G P
Sbjct: 631 YANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE 690
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
+ +++ + L + K K V SL+S AK G++E
Sbjct: 691 TEHYVCMVSLLGRAGRLNKARELIE---KMPTKPAAIVWRSLLSGCAKAGNVE 740
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 54/317 (17%)
Query: 43 HENTVVQKDIIPYGLDPTTFQ---------------VACHMFDEISDLTGESATTIICGF 87
H VV II +GL+ T+ A +F+++ + S +T++
Sbjct: 61 HYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSAC 120
Query: 88 AKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSSTVL--RNVVIGRQLHACATKIGLA 144
+E+++ +F + K PNE+ + + + + L R + QL + K G
Sbjct: 121 NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFD 180
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
+V+VG+ L+D Y LK G + A VF +
Sbjct: 181 RDVYVGTLLIDFY-------------------------------LKDGNIDYARLVFDAL 209
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
PE++ V+W M+ GC + G + ++ F ++ + +P +V++A + + L GK
Sbjct: 210 PEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGK 269
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ HA ++ ++D + N LI Y KCG + + +FN + +NI+S ++ GY QN
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329
Query: 325 RGG-----FTSWATLGL 336
FTS + GL
Sbjct: 330 LHKEAMELFTSMSKFGL 346
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 31/247 (12%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
++ G+ + H + LF+ M R ++FT TV + L + G+Q+HA A K G
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
+++V S +LD+YVK CG + +F F
Sbjct: 548 YDLDLWVSSGILDMYVK--------------------------CGDMSAAQF-----AFD 576
Query: 203 EMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGM 262
+P + V+W M+ GC + G E A + F M G +P E T ++ A++ + AL
Sbjct: 577 SIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 636
Query: 263 GKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
G++ HA A+K D FVG SL+ YAKCGS++D+ +F ++ NI + NA++ G AQ
Sbjct: 637 GRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ 696
Query: 323 NGRGGFT 329
+G G T
Sbjct: 697 HGEGKET 703
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 33/228 (14%)
Query: 100 FSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVK 159
F+ M+ S + ++ TF +L ++ + ++ +G+Q+H A K+GL + V ++L+++Y K
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 160 LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGC 219
L +F A VF M ER+++SWN+++ G
Sbjct: 363 LR-------------------------------KFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 220 SQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA-ALGMGKRFHACAIKCLGKLD 278
+Q G EAV F+ +LR G P + T SV+ AA+ + L + K+ H AIK D
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 279 VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
FV +LI Y++ M+++ ++F + ++V+ NA++ GY Q+ G
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDG 498
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
FD I + TT+I G + E A H+FS+M + P+EFT T+ +S+ L +
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
GRQ+HA A K+ ++ FVG++L+D+Y K +I++A F + N+ ++ A++ G
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694
Query: 189 LKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEA 228
+ G ++ LQ+F +M + V++ ++ CS +G EA
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA 738
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 127/303 (41%), Gaps = 43/303 (14%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKR-HC----HEDAIHLFSRMLASKIRPNEFTFGTVL 119
A +FD++ D S +I+ +A+ C + A LF + + + T +L
Sbjct: 93 ARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPML 152
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
V H A KIGL + FV AL+++Y+K ++E + F + + +VV
Sbjct: 153 KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV 212
Query: 180 SYTALVCGYLKRGRFEDALQV---FHEM---PERNVVSWNAMVGGCS------------- 220
+ ++ YL+ G E+A+ + FH P + A + G
Sbjct: 213 LWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGN 272
Query: 221 -------------------QTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALG 261
+G + F DM+ + TF ++ A K+ +L
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 262 MGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYA 321
+G++ H A+K L + V NSLI+ Y K + +F+ + +R+++S N+V+ G A
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 322 QNG 324
QNG
Sbjct: 393 QNG 395
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 174 QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTG----HNEEAV 229
++P L+ Y K G A +VF +MP+R++VSWN+++ +Q+ N +
Sbjct: 70 ENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQA 129
Query: 230 NFFIDMLREGFIPTES-TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISF 288
+LR+ + T T ++ + + FH A K D FV +L++
Sbjct: 130 FLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNI 189
Query: 289 YAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
Y K G +++ ++F ++ R++V N ++ Y + G
Sbjct: 190 YLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 31/259 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD++ S T+I G+A + + L RM +RP++ TFG L S
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ ++ +GR LH K G +D+++K TAL
Sbjct: 258 MCDLEMGRMLHCQIVKTGFD---------VDMHLK----------------------TAL 286
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+ YLK G+ E + +V +P ++VV W M+ G + G E+A+ F +ML+ G +
Sbjct: 287 ITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSS 346
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
SV+ + A++ + +G H ++ LD NSLI+ YAKCG ++ SL++F +
Sbjct: 347 EAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFER 406
Query: 305 LLKRNIVSCNAVVCGYAQN 323
+ +R++VS NA++ GYAQN
Sbjct: 407 MNERDLVSWNAIISGYAQN 425
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 34/232 (14%)
Query: 93 HEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSA 152
H+ + FS MLA+K+ P+ FTF ++L + L+ + G +H G +S+ ++ S+
Sbjct: 27 HKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSS 86
Query: 153 LLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSW 212
L++LY K + A+K VF EM ER+VV W
Sbjct: 87 LVNLYAKFGLLAHARK-------------------------------VFEEMRERDVVHW 115
Query: 213 NAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
AM+G S+ G EA + +M +G P T +++ +I L + H A+
Sbjct: 116 TAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVI 172
Query: 273 CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
D+ V NS+++ Y KC + D+ +F+++ +R++VS N ++ GYA G
Sbjct: 173 YGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 32/247 (12%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I G + E A+ +FS ML S + +V+ S L + +G +H +
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G + ++L+ +Y K CG+L + +L +
Sbjct: 375 HGYTLDTPALNSLITMYAK--------------------------CGHLDK-----SLVI 403
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES-TFPSVITAAAKIAA 259
F M ER++VSWNA++ G +Q +A+ F +M + +S T S++ A + A
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
L +GK H I+ + V +L+ Y+KCG +E + F+ + +++VS ++ G
Sbjct: 464 LPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAG 523
Query: 320 YAQNGRG 326
Y +G+G
Sbjct: 524 YGFHGKG 530
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y K DA +F +M +R++VSWN M+ G + G+ E + M +G P + TF
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
+ ++ + + L MG+ H +K +D+ + +LI+ Y KCG E S + +
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN 308
Query: 308 RNIVSCNAVVCGYAQNGRG 326
+++V ++ G + GR
Sbjct: 309 KDVVCWTVMISGLMRLGRA 327
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRP-NEFTFGTVLHSSTVLR 126
+F+ +++ S II G+A+ A+ LF M ++ + FT ++L + +
Sbjct: 403 IFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAG 462
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ +G+ +H + + V +AL+D+Y K +E AQ+ F +VVS+ L+
Sbjct: 463 ALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIA 522
Query: 187 GYLKRGRFEDALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFI 241
GY G+ + AL+++ E E N V + A++ CS G ++ + F M+R+ G
Sbjct: 523 GYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVE 582
Query: 242 PTESTFPSVI 251
P V+
Sbjct: 583 PNHEHLACVV 592
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 141/297 (47%), Gaps = 39/297 (13%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIR------------------ 109
+FD +SD + + ++C +A++ C E+ + + S M +S I
Sbjct: 173 VFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGY 232
Query: 110 -----------------PNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSA 152
P++ T +VL S + +GR +H K GL + V SA
Sbjct: 233 HKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISA 292
Query: 153 LLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----N 208
++D+Y K + F + A + G + G + AL++F E+ N
Sbjct: 293 MIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 209 VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHA 268
VVSW +++ GC+Q G + EA+ F +M G P T PS++ A IAALG G+ H
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 269 CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
A++ +V VG++LI YAKCG + S ++FN + +N+V N+++ G++ +G+
Sbjct: 413 FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK 469
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 142/300 (47%), Gaps = 5/300 (1%)
Query: 30 KTVHTHYHSLATKHENT-VVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFA 88
KT H L + +N + +I + F A + I D T S +++I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 89 KRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVF 148
K +I +FSRM + + P+ + L +G+Q+H + GL + F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 149 VGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP--- 205
V ++ +Y++ + +A+K F +VV+ +AL+C Y ++G E+ +++ EM
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 206 -ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
E N+VSWN ++ G +++G+++EAV F + GF P + T SV+ + L MG+
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
H IK D V +++I Y K G + + +FN+ CNA + G ++NG
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 65 ACHMFDEISDLTGE----SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
A MF+ + T E S T+II G A+ +A+ LF M + ++PN T ++L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
+ + + GR H A ++ L NV VGSAL+D+Y K I +Q F N+V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 181 YTALVCGYLKRGRFEDALQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
+ +L+ G+ G+ ++ + +F + + + +S+ +++ C Q G +E +F M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 237 RE-GFIPTESTFPSVITAAAKIAAL 260
E G P + ++ + L
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKL 541
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 140/275 (50%), Gaps = 41/275 (14%)
Query: 55 YGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK-IRPNEF 113
YG++ A +FDE+ + T ++ F+K +E+A+ LF M K + P+
Sbjct: 208 YGVNREPVD-ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGS 266
Query: 114 TFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDT 173
TFGTVL + LR + G+++H G+ SNV V S+LLD+Y K ++ EA++ F
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
Query: 174 QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFI 233
N VS++AL+ GY + G E A+++F EM E+++
Sbjct: 327 SKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----------------------- 363
Query: 234 DMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK--CLGKLDVFVGNSLISFYAK 291
F +V+ A A +AA+ +GK H ++ C G +V V ++LI Y K
Sbjct: 364 ------------CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG--NVIVESALIDLYGK 409
Query: 292 CGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
G ++ + +++K+ RN+++ NA++ AQNGRG
Sbjct: 410 SGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRG 444
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 30/246 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T+++ G+ H A+ +F M++ + NEFT + + + + L V +GR H
Sbjct: 130 SWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVV 189
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
G N F+ S L LY +A++ F + P+V+ +TA++ + K +E+AL
Sbjct: 190 ITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEAL 249
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
+F+ M +G +P STF +V+TA +
Sbjct: 250 GLFYAMHR------------------------------GKGLVPDGSTFGTVLTACGNLR 279
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
L GK H I +V V +SL+ Y KCGS+ ++ +FN + K+N VS +A++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 319 GYAQNG 324
GY QNG
Sbjct: 340 GYCQNG 345
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
N VV+ ++ + + A +F+ +S S + ++ G+ + HE AI +F M
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME 358
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
+ + FGTVL + L V +G+++H + G NV V SAL+DLY K
Sbjct: 359 EKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGK----- 409
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
G + A +V+ +M RN+++WNAM+ +Q G
Sbjct: 410 --------------------------SGCIDSASRVYSKMSIRNMITWNAMLSALAQNGR 443
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG-KLDVFVGN 283
EEAV+FF DM+++G P +F +++TA + G+ + K G K +
Sbjct: 444 GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYS 503
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
+I + G E++ + + RN S V+ G
Sbjct: 504 CMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
+AI + + +S+I + ++L + + + + G Q HA K GL ++ VG++LL
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 155 DLYVKLST-IEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
LY KL + E ++ F + +S+T+++ GY+ AL+VF EM
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM--------- 154
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC 273
V+F +D E T S + A +++ + +G+ FH I
Sbjct: 155 ---------------VSFGLD-------ANEFTLSSAVKACSELGEVRLGRCFHGVVITH 192
Query: 274 LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
+ + F+ ++L Y D+ +F+++ + +++ AV+ +++N
Sbjct: 193 GFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 242
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 133/248 (53%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +I G+ + +E++I L M + + P T VL + + +++ + +++H
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
++ ++ + +AL++ Y ++ A + F + +V+S+T++V GY++RG + A
Sbjct: 263 SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLAR 322
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
F +MP R+ +SW M+ G + G E++ F +M G IP E T SV+TA A +
Sbjct: 323 TYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
+L +G+ K K DV VGN+LI Y KCG E + +F+ + +R+ + A+V
Sbjct: 383 SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 319 GYAQNGRG 326
G A NG+G
Sbjct: 443 GLANNGQG 450
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 36/247 (14%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN---VVIGRQLHAC 137
+I G++K C + + L+ ML + P+ TF +L+ + R+ + G++LH
Sbjct: 103 NNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNG--LKRDGGALACGKKLHCH 160
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDA 197
K GL SN++V +AL+ +Y +CG + R
Sbjct: 161 VVKFGLGSNLYVQNALVKMYS--------------------------LCGLMDMAR---- 190
Query: 198 LQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKI 257
VF + +V SWN M+ G ++ EE++ ++M R PT T V++A +K+
Sbjct: 191 -GVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKV 249
Query: 258 AALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVV 317
+ KR H +C + + + N+L++ YA CG M+ ++ +F + R+++S ++V
Sbjct: 250 KDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIV 309
Query: 318 CGYAQNG 324
GY + G
Sbjct: 310 KGYVERG 316
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 115/226 (50%), Gaps = 9/226 (3%)
Query: 40 ATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHL 99
+ K + + I+ ++ ++A FD++ S T +I G+ + C +++ +
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 100 FSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVK 159
F M ++ + P+EFT +VL + L ++ IG + K + ++V VG+AL+D+Y K
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFK 415
Query: 160 LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAM 215
E+AQK F D + ++TA+V G G+ ++A++VF +M + ++ +++ +
Sbjct: 416 CGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALG 261
+ C+ +G ++A FF M + I PS++ + LG
Sbjct: 476 LSACNHSGMVDQARKFFAKMRSDHRIE-----PSLVHYGCMVDMLG 516
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A ++F ++PE +VV WN M+ G S+ + E V +++ML+EG P TFP ++ +
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 257 I-AALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNA 315
AL GK+ H +K +++V N+L+ Y+ CG M+ + +F++ K ++ S N
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 316 VVCGY 320
++ GY
Sbjct: 207 MISGY 211
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Query: 58 DPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS--KIRPNEFTF 115
D A + D T + ++I K E + + R+L+S ++P+ +T
Sbjct: 52 DHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTV 111
Query: 116 GTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH 175
++ + T LR G Q+H + G ++ V + L+ LY +L ++ K F
Sbjct: 112 NFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPC 171
Query: 176 PNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
P+ V TA+V + G A ++F MPER+ ++WNAM+ G +Q G + EA+N F M
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
Query: 236 LREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSM 295
EG SV++A ++ AL G+ H+ + K+ V + +L+ YAKCG M
Sbjct: 232 QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDM 291
Query: 296 EDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
E ++ +F + ++N+ + ++ + G A NG G
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSALNGLAMNGFG 322
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 105/241 (43%), Gaps = 36/241 (14%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F+ + + + +I G+A+ +A+++F M ++ N +VL + T L
Sbjct: 196 LFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGA 255
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ GR H+ + + V + + L+DLY K CG
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAK--------------------------CG 289
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
+ E A++VF M E+NV +W++ + G + G E+ + F M ++G P TF
Sbjct: 290 DM-----EKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTF 344
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLG---KLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
SV+ + + + G+R G +L+ + L+ YA+ G +ED++ + +
Sbjct: 345 VSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHY--GCLVDLYARAGRLEDAVSIIQQ 402
Query: 305 L 305
+
Sbjct: 403 M 403
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 147/302 (48%), Gaps = 39/302 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD + + + + +I +++ + + LF M+ + P++F F +L
Sbjct: 134 ARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN 193
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+V G+ +H+ K+G++S + V +++L +Y K ++ A K F + +V+++ ++
Sbjct: 194 CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSV 253
Query: 185 VCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTG----------------- 223
+ Y + G+ E+A+++ EM + + V+WN ++GG +Q G
Sbjct: 254 LLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGI 313
Query: 224 ---------------HN---EEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
HN +A++ F M G +P T S ++A + + + G
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
H+ A+K DV VGNSL+ Y+KCG +ED+ +F+ + +++ + N+++ GY Q G
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGY 433
Query: 326 GG 327
G
Sbjct: 434 CG 435
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 44/289 (15%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I G A+ +F +M + + PN T + + + + L+ + G ++H+ A K
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH------------------------- 175
+G +V VG++L+D+Y K +E+A+K F ++
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 176 ----------PNVVSYTALVCGYLKRGRFEDALQVFHEMP-----ERNVVSWNAMVGGCS 220
PN++++ ++ GY+K G +A+ +F M +RN +WN ++ G
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 221 QTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVF 280
Q G +EA+ F M F+P T S++ A A + M + H C ++ LD
Sbjct: 501 QNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR--RNLDAI 558
Query: 281 --VGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGG 327
V N+L YAK G +E S +F + ++I++ N+++ GY +G G
Sbjct: 559 HAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYG 607
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 85/156 (54%)
Query: 170 FGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAV 229
FG P+V T L+ Y K G DA +VF M ERN+ +W+AM+G S+ E
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 230 NFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFY 289
F M+++G +P + FP ++ A + GK H+ IK + V NS+++ Y
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 290 AKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
AKCG ++ + F ++ +R++++ N+V+ Y QNG+
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
II G+ + ++A+ LF +M S+ PN T ++L + L + R++H C +
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN 554
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
L + V +AL D Y K IE ++ F + +++++ +L+ GY+ G + AL +F+
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 203 EM------PERNVVS 211
+M P R +S
Sbjct: 615 QMKTQGITPNRGTLS 629
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 32/301 (10%)
Query: 58 DPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
+P T A + + I G + ++I +A E A+ +F ML + P++++F
Sbjct: 86 EPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTF 145
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGS-------------------------- 151
VL + GRQ+H K GL ++VFV +
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRD 205
Query: 152 -----ALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPE 206
+LL Y++ ++EA+ F + + NV S+ ++ GY G ++A +VF MP
Sbjct: 206 AVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPV 265
Query: 207 RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF-IPTESTFPSVITAAAKIAALGMGKR 265
R+VVSWNAMV + G E + F ML + P T SV++A A + +L G+
Sbjct: 266 RDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEW 325
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
H K +++ F+ +L+ Y+KCG ++ +L +F KR++ + N+++ + +G
Sbjct: 326 VHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGL 385
Query: 326 G 326
G
Sbjct: 386 G 386
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 69/292 (23%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLA-SKIRPNEFTFGTVLHSST 123
A +FD + S ++ +A C+ + + +F++ML S +P+ FT +VL +
Sbjct: 256 AKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACA 315
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
L ++ G +H K G+ F+ +AL+D+Y K
Sbjct: 316 SLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSK------------------------ 351
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
CG + + AL+VF +R+V +WN+++ S G ++A+ F +M+ EGF P
Sbjct: 352 --CG-----KIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPN 404
Query: 244 ESTFPSVITAAAKIAALGMGKRF----------------HACAIKCLGKLD--------- 278
TF V++A + L ++ + C + LG++
Sbjct: 405 GITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV 464
Query: 279 --------VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
+ SL+ + G +E + + N+LL+ N+ + GYAQ
Sbjct: 465 NEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSS----GYAQ 512
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 30/194 (15%)
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ-HPNVVSYTALVCGYLK 190
+Q HA K GL + F S L+ AF T P VSY
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLV--------------AFAATNPEPKTVSY--------- 92
Query: 191 RGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSV 250
A + + + N + N+++ + + E A+ F +ML P + +F V
Sbjct: 93 ------AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFV 146
Query: 251 ITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
+ A A G++ H IK DVFV N+L++ Y + G E + + +++ R+
Sbjct: 147 LKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDA 206
Query: 311 VSCNAVVCGYAQNG 324
VS N+++ Y + G
Sbjct: 207 VSWNSLLSAYLEKG 220
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 113/196 (57%), Gaps = 1/196 (0%)
Query: 131 GRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLK 190
G+ +H ++G+ S+ ++ + LLDLY++ + A+K F + +V S+ A + K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 191 RGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSV 250
G +A +VF MPER+VVSWN M+ + G E+A+ + M+ +GF+P+ T SV
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 251 ITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMED-SLLMFNKLLKRN 309
++A +K+ G R H A+K ++FVGN+L+S YAKCG + D + +F L + N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 310 IVSCNAVVCGYAQNGR 325
VS AV+ G A+ +
Sbjct: 205 EVSYTAVIGGLARENK 220
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
AC +FD + + S +I ++ E A+ ++ RM+ P+ FT +VL + +
Sbjct: 91 ACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSK 150
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTI-EEAQKAFGDTQHPNVVSYTA 183
+ + V G + H A K GL N+FVG+ALL +Y K I + + F PN VSYTA
Sbjct: 151 VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTA 210
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
++ G + + +A+Q+F M E+ V + + I REG
Sbjct: 211 VIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNI-----------LSISAPREG---- 255
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
+ ++I +GK+ H A++ D+ + NSL+ YAK M + L+F
Sbjct: 256 -------CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 304 KLLKRNIVSCNAVVCGYAQNGR 325
++ + N+VS N ++ G+ Q R
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYR 330
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 140/317 (44%), Gaps = 54/317 (17%)
Query: 52 IIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPN 111
I+ YG+ +F+ +S S T +I G A+ + +A+ +F M ++ +
Sbjct: 189 IVDYGV---------RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVD 239
Query: 112 EFTFGTVL---------HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLST 162
+L S + + +G+Q+H A ++G ++ + ++LL++Y K
Sbjct: 240 SVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKD 299
Query: 163 IEEAQKAFGDTQHPNVVSYTALVCGY---------------------------------- 188
+ A+ F + NVVS+ ++ G+
Sbjct: 300 MNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA 359
Query: 189 -LKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
+ G E ++F +P+ +V +WNAM+ G S H EEA++ F M + P ++T
Sbjct: 360 CFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTL 419
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
++++ A++ L GK+ H I+ + + + LI+ Y++C ME S +F+ +
Sbjct: 420 SVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCIN 479
Query: 308 RNIVSC-NAVVCGYAQN 323
++C N+++ G+ N
Sbjct: 480 ELDIACWNSMISGFRHN 496
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 121/261 (46%), Gaps = 31/261 (11%)
Query: 67 HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLR 126
+F I + + ++ G++ +E+AI F +M ++P++ T +L S LR
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ G+Q+H + ++ N + S L+ +Y + +E ++ F D
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC------------- 477
Query: 187 GYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTES 245
+ E ++ WN+M+ G + +A+ F M + + P E+
Sbjct: 478 -----------------INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 246 TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
+F +V+++ +++ +L G++FH +K D FV +L Y KCG ++ + F+ +
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 580
Query: 306 LKRNIVSCNAVVCGYAQNGRG 326
L++N V N ++ GY NGRG
Sbjct: 581 LRKNTVIWNEMIHGYGHNGRG 601
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Query: 66 CHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIR-PNEFTFGTVLHSSTV 124
C D I++L ++I GF A+ LF RM + + PNE +F TVL S +
Sbjct: 472 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L +++ GRQ H K G S+ FV +AL D+Y K I+ A++ F N V + +
Sbjct: 532 LCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEM 591
Query: 185 VCGYLKRGRFEDALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR-EG 239
+ GY GR ++A+ ++ +M + + +++ +++ CS +G E + M R G
Sbjct: 592 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 651
Query: 240 FIPTESTFPSVITAAAKIAAL 260
P + ++ + L
Sbjct: 652 IEPELDHYICIVDCLGRAGRL 672
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 32/245 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKI-RPNEFTFGTVLHSSTVLRNVVIGRQLHACAT 139
+++ G++K D + +F R+L I P+ FTF V+ + L +GR +H
Sbjct: 75 NSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVV 134
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQ 199
K G +V V S+L+ +Y K + FE++LQ
Sbjct: 135 KSGYVCDVVVASSLVGMYAKFNL-------------------------------FENSLQ 163
Query: 200 VFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAA 259
VF EMPER+V SWN ++ Q+G E+A+ F M GF P + I+A +++
Sbjct: 164 VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLW 223
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
L GK H +K +LD +V ++L+ Y KC +E + +F K+ ++++V+ N+++ G
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 320 YAQNG 324
Y G
Sbjct: 284 YVAKG 288
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 31/263 (11%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F+ + +FDE+ + S T+I F + E A+ LF RM +S PN + + +
Sbjct: 158 FENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISA 217
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ L + G+++H K G + +V SAL+D+Y K +E A+
Sbjct: 218 CSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR-------------- 263
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
+VF +MP +++V+WN+M+ G G ++ V M+ EG
Sbjct: 264 -----------------EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P+++T S++ A ++ L GK H I+ + D++V SLI Y KCG + +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 302 FNKLLKRNIVSCNAVVCGYAQNG 324
F+K K S N ++ Y G
Sbjct: 367 FSKTQKDVAESWNVMISSYISVG 389
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 126/264 (47%), Gaps = 31/264 (11%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+VA +F ++ + + ++I G+ + + + + +RM+ RP++ T ++L +
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ RN++ G+ +H + + ++++V +L+DLY K A+ F TQ
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ------- 371
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
+D + SWN M+ G+ +AV + M+ G
Sbjct: 372 -------------KDVAE-----------SWNVMISSYISVGNWFKAVEVYDQMVSVGVK 407
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P TF SV+ A +++AAL GK+ H + + D + ++L+ Y+KCG+ +++ +
Sbjct: 408 PDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRI 467
Query: 302 FNKLLKRNIVSCNAVVCGYAQNGR 325
FN + K+++VS ++ Y +G+
Sbjct: 468 FNSIPKKDVVSWTVMISAYGSHGQ 491
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 4/172 (2%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F + ES +I + A+ ++ +M++ ++P+ TF +VL + + L
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ G+Q+H ++ L ++ + SALLD+Y K +EA + F +VVS+T ++
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 188 YLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDM 235
Y G+ +AL F EM + + V+ A++ C G +E + FF M
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 32/235 (13%)
Query: 92 CHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGS 151
C+E A+ LF RM + + PNEFT ++L+ + + +G QLH K+G +++V +
Sbjct: 329 CNE-AVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN 387
Query: 152 ALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVS 211
AL+D+Y K + + A+++F E+ +N VS
Sbjct: 388 ALIDVYAKCE-------------------------------KMDTAVKLFAELSSKNEVS 416
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI 271
WN ++ G G +A + F + LR TE TF S + A A +A++ +G + H AI
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
K V V NSLI YAKCG ++ + +FN++ ++ S NA++ GY+ +G G
Sbjct: 477 KTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLG 531
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 114/246 (46%), Gaps = 33/246 (13%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
I+ + + ED++ L S M + PN +TF T L +S L + +H K
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC 277
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
+ VG LL LY +L G DA +VF+
Sbjct: 278 YVLDPRVGVGLLQLYTQL-------------------------------GDMSDAFKVFN 306
Query: 203 EMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF-IPTESTFPSVITAAAKIAALG 261
EMP+ +VV W+ M+ Q G EAV+ FI M RE F +P E T S++ A G
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 262 MGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYA 321
+G++ H +K LD++V N+LI YAKC M+ ++ +F +L +N VS N V+ GY
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 322 QNGRGG 327
G GG
Sbjct: 426 NLGEGG 431
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A ++FDE+ + S T+ G+A C +D I L+SR+ N F + L
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYA---C-QDPIGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L I LH+ K+G SN FVG+AL++ Y
Sbjct: 159 LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYS-------------------------- 192
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
VCG + R VF + +++V W +V + G+ E+++ M GF+P
Sbjct: 193 VCGSVDSAR-----TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNN 247
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
TF + + A+ + A K H +K LD VG L+ Y + G M D+ +FN+
Sbjct: 248 YTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNE 307
Query: 305 LLKRNIVSCNAVVCGYAQNG 324
+ K ++V + ++ + QNG
Sbjct: 308 MPKNDVVPWSFMIARFCQNG 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
A +F E+S S T+I G+ A +F L +++ E TF + L +
Sbjct: 399 MDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGA 458
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L ++ +G Q+H A K A V V ++L+D+Y K I+ AQ F + + +V S+
Sbjct: 459 CASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASW 518
Query: 182 TALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
AL+ GY G AL++ M +R N +++ ++ GCS G ++ F M+R
Sbjct: 519 NALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Query: 238 E 238
+
Sbjct: 579 D 579
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 30/246 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +I G+ K +A +LF M + I+PNE+T G+VL T L ++ G Q+H
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K G +V V + LL +Y + I EA+ F +
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME------------------------ 187
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
E+N V+W +M+ G SQ G +A+ F D+ REG + TFPSV+TA A ++
Sbjct: 188 ------GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVS 241
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
A +G + H C +K K +++V ++LI YAKC ME + + + ++VS N+++
Sbjct: 242 ACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIV 301
Query: 319 GYAQNG 324
G + G
Sbjct: 302 GCVRQG 307
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 34/255 (13%)
Query: 71 EISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLR-NVV 129
E+ D+ S ++I G ++ +A+ +F RM ++ ++FT ++L+ + R +
Sbjct: 289 EVDDVV--SWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMK 346
Query: 130 IGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYL 189
I H K G A+ V +AL+D+Y K ++ A K F +V+S+TALV G
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNT 406
Query: 190 KRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
G +++AL++F N VGG + P + S
Sbjct: 407 HNGSYDEALKLF----------CNMRVGGIT---------------------PDKIVTAS 435
Query: 250 VITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRN 309
V++A+A++ L G++ H IK + V NSL++ Y KCGS+ED+ ++FN + R+
Sbjct: 436 VLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRD 495
Query: 310 IVSCNAVVCGYAQNG 324
+++ ++ GYA+NG
Sbjct: 496 LITWTCLIVGYAKNG 510
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 131 GRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLK 190
G +H+ A + L SN+ +G DL K ++EA++ F + ++ ++ Y
Sbjct: 17 GSCIHSYADRTKLHSNLLLG----DL-SKSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 191 RGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSV 250
R DA ++F P +N +SWNA++ G ++G EA N F +M +G P E T SV
Sbjct: 72 SRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSV 131
Query: 251 ITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL-KRN 309
+ + L G++ H IK LDV V N L++ YA+C + ++ +F + ++N
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKN 191
Query: 310 IVSCNAVVCGYAQNG 324
V+ +++ GY+QNG
Sbjct: 192 NVTWTSMLTGYSQNG 206
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 32/245 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+++ G+++ AI F + + N++TF +VL + + +G Q+H C K
Sbjct: 196 TSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVK 255
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G +N++V SAL+D+Y K +E A+ + +VVS+ +++ G +++G +AL +
Sbjct: 256 SGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSM 315
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA-AAKIAA 259
F M ER DM + F T PS++ A
Sbjct: 316 FGRMHER--------------------------DMKIDDF-----TIPSILNCFALSRTE 344
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
+ + H +K V N+L+ YAK G M+ +L +F +++++++S A+V G
Sbjct: 345 MKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTG 404
Query: 320 YAQNG 324
NG
Sbjct: 405 NTHNG 409
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T ++ G +++A+ LF M I P++ +VL +S L + G+Q+H
Sbjct: 397 SWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNY 456
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K G S++ V ++L+ +Y K ++E+A F + +++++T L+ GY K G EDA
Sbjct: 457 IKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQ 516
Query: 199 QVFHEM 204
+ F M
Sbjct: 517 RYFDSM 522
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 131/275 (47%), Gaps = 12/275 (4%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
FD I D ++ G+A + + LF +ML RP E+TF T L S V
Sbjct: 374 FDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL- 431
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG- 187
+QLH+ ++G N +V S+L+ Y K + +A P V +V G
Sbjct: 432 ---QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y +RG++ +++++ + + + VSWN + CS++ ++EE + F ML+ P + TF
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 248 PSVITAAAKIAALGMGKRFHACAIKC-LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
S+++ +K+ L +G H K D FV N LI Y KCGS+ + +F +
Sbjct: 549 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR 608
Query: 307 KRNIVSCNAVVC-----GYAQNGRGGFTSWATLGL 336
++N+++ A++ GY Q F +LG
Sbjct: 609 EKNLITWTALISCLGIHGYGQEALEKFKETLSLGF 643
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 31/261 (11%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
++A +F+++ + E+ ++ R ++ + F ++ E +F VL
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ ++++ I +QLH ATK GL + V ++L+ Y K A++ F D ++VS+
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
A++C K AL++F MPE GF
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEH-------------------------------GFS 313
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P + T+ SV+ ++ + L G++ H IK + + +GN+LI FYAKCG++EDS L
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 302 FNKLLKRNIVSCNAVVCGYAQ 322
F+ + +NIV NA++ GYA
Sbjct: 374 FDYIRDKNIVCWNALLSGYAN 394
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 34/261 (13%)
Query: 64 VACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSST 123
+A +FD++ + S TII G++K + A +FS M PN+ T +L ++
Sbjct: 67 LAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCAS 126
Query: 124 VLRNVVIGRQLHACATKIGL-ASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
+ +V G QLH + K GL ++ FVG+ LL LY +L +E A+
Sbjct: 127 L--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAE--------------- 169
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
QVF +MP +++ +WN M+ G +E + FF +++R G
Sbjct: 170 ----------------QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASL 213
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
TES+F V+ + + L + K+ H A K ++ V NSLIS Y KCG+ + MF
Sbjct: 214 TESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMF 273
Query: 303 NKLLKRNIVSCNAVVCGYAQN 323
+IVS NA++C A++
Sbjct: 274 QDAGSWDIVSWNAIICATAKS 294
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 38/299 (12%)
Query: 28 ITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGF 87
I+K +H E +VV I YG T +A MF + S IIC
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNT-HMAERMFQDAGSWDIVSWNAIICAT 291
Query: 88 AKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNV 147
AK A+ LF M PN+ T+ +VL S++++ + GRQ+H K G + +
Sbjct: 292 AKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGI 351
Query: 148 FVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER 207
+G+AL+D Y K +E+++ F + N+V + AL+ GY +
Sbjct: 352 VLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK---------------- 395
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFH 267
++ F+ ML+ GF PTE TF + A K + ++ H
Sbjct: 396 ----------------DGPICLSLFLQMLQMGFRPTEYTF----STALKSCCVTELQQLH 435
Query: 268 ACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL-KRNIVSCNAVVCGYAQNGR 325
+ ++ + + +V +SL+ YAK M D+LL+ + ++V N V Y++ G+
Sbjct: 436 SVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQ 494
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 34/174 (19%)
Query: 93 HEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA-SNVFVGS 151
HE+ I LF ML S IRP+++TF ++L + L ++ +G +H TK + ++ FV +
Sbjct: 526 HEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCN 585
Query: 152 ALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVS 211
L+D+Y K CG ++ ++VF E E+N+++
Sbjct: 586 VLIDMYGK--------------------------CGSIR-----SVMKVFEETREKNLIT 614
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA--AKIAALGMG 263
W A++ G+ +EA+ F + L GF P +F S++TA + GMG
Sbjct: 615 WTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMG 668
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y K G A +VF +MPERN VS+N ++ G S+ G ++A F +M G++P +ST
Sbjct: 59 YEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTV 118
Query: 248 PSVITAAAKIAALGMGKRFHACAIKC-LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
+++ A+ + G + H ++K L D FVG L+ Y + +E + +F +
Sbjct: 119 SGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMP 176
Query: 307 KRNIVSCN 314
+++ + N
Sbjct: 177 FKSLETWN 184
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 125/239 (52%), Gaps = 2/239 (0%)
Query: 91 HCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVG 150
+ H AI ++ ++ A +P+ FTF VL + + +V GRQ+H G S+V V
Sbjct: 95 NAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV 154
Query: 151 SALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP--ERN 208
+ L+ +Y + +A+K F + +V + AL+ GY K G ++A + MP RN
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 209 VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHA 268
VSW ++ G +++G EA+ F ML E P E T +V++A A + +L +G+R +
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 269 CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGG 327
V + N++I YAK G++ +L +F + +RN+V+ ++ G A +G G
Sbjct: 275 YVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGA 333
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T +I G+AK +AI +F RML + P+E T VL + L ++ +G ++ +
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
G+ V + +A++D+Y K I +A F NVV++T ++ G G
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG------ 330
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
H EA+ F M++ G P + TF ++++A + +
Sbjct: 331 -------------------------HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG 365
Query: 259 ALGMGKRF 266
+ +GKR
Sbjct: 366 WVDLGKRL 373
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 117/236 (49%), Gaps = 35/236 (14%)
Query: 91 HCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVG 150
HC + + RML+S + P+ +TF +V+ S L + IG+ +H A G
Sbjct: 90 HC----VAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG------ 139
Query: 151 SALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVV 210
LD YV+ ALV Y K G E A QVF MPE+++V
Sbjct: 140 ---LDTYVQ----------------------AALVTFYSKCGDMEGARQVFDRMPEKSIV 174
Query: 211 SWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACA 270
+WN++V G Q G +EA+ F M GF P +TF S+++A A+ A+ +G H
Sbjct: 175 AWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYI 234
Query: 271 IKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
I L+V +G +LI+ Y++CG + + +F+K+ + N+ + A++ Y +G G
Sbjct: 235 ISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYG 290
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 26/270 (9%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
+T VQ ++ + + A +FD + + + + +++ GF + ++AI +F +M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
S P+ TF ++L + V +G +H GL NV +G+AL++LY + +
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM-----PERNVVSWNAMVGGC 219
+A++ F + NV ++TA++ Y G + A+++F++M P N V++ A++ C
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 220 SQTGHNEEAVNFF-------------------IDML-REGFIPTESTFPSVITAAAKIAA 259
+ G EE + + +DML R GF+ F + A K A
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 260 LGM-GKRFHACAIKCLGKLDVFVGNSLISF 288
+ AC + L V + LI+
Sbjct: 381 PALWTAMLGACKMHRNYDLGVEIAKRLIAL 410
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 73/125 (58%)
Query: 200 VFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAA 259
+F +P + +N+++ S+ V ++ ML P+ TF SVI + A ++A
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
L +GK H A+ LD +V +L++FY+KCG ME + +F+++ +++IV+ N++V G
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 320 YAQNG 324
+ QNG
Sbjct: 183 FEQNG 187
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 135/263 (51%), Gaps = 31/263 (11%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
++A +FD + + + S T+I + + +A+ +F M + +EFT +VL +
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
V + + ++LH + K + N++VG+ALLDLY K
Sbjct: 173 GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAK----------------------- 209
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
CG +K DA+QVF M +++ V+W++MV G Q + EEA+ + R
Sbjct: 210 ---CGMIK-----DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
+ T SVI A + +AAL GK+ HA K +VFV +S + YAKCGS+ +S ++F
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 321
Query: 303 NKLLKRNIVSCNAVVCGYAQNGR 325
+++ ++N+ N ++ G+A++ R
Sbjct: 322 SEVQEKNLELWNTIISGFAKHAR 344
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL----LDLYVKLSTIEEAQKAFGD--- 172
++S++ RN+ + G SN F L L L + + EA+ G
Sbjct: 30 NTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIR 89
Query: 173 -TQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNF 231
+V L+ Y K G E A QVF M ER++VSWN M+G ++ EA++
Sbjct: 90 IDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDI 149
Query: 232 FIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAK 291
F++M EGF +E T SV++A K+ H ++K L+++VG +L+ YAK
Sbjct: 150 FLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAK 209
Query: 292 CGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
CG ++D++ +F + ++ V+ +++V GY QN
Sbjct: 210 CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 107/201 (53%), Gaps = 9/201 (4%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +F+ + D + + ++++ G+ + +E+A+ L+ R + N+FT +V+ + +
Sbjct: 216 AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSN 275
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L ++ G+Q+HA K G SNVFV S+ +D+Y K ++ E+ F + Q N+ + +
Sbjct: 276 LAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTI 335
Query: 185 VCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+ G+ K R ++ + +F +M + N V++++++ C TG EE FF ++R
Sbjct: 336 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMR--- 391
Query: 241 IPTESTFPSVITAAAKIAALG 261
T P+V+ + + LG
Sbjct: 392 -TTYGLSPNVVHYSCMVDILG 411
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 125/248 (50%), Gaps = 31/248 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S TT+I G+ + + + A+ F +ML IR +E + + L+ + G+Q+HA A
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
G +S++ +AL+ LY + IEE SY A
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEE--------------SYLA--------------- 648
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
F + + ++WNA+V G Q+G+NEEA+ F+ M REG TF S + AA++ A
Sbjct: 649 --FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 706
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
+ GK+ HA K + V N+LIS YAKCGS+ D+ F ++ +N VS NA++
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766
Query: 319 GYAQNGRG 326
Y+++G G
Sbjct: 767 AYSKHGFG 774
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 74/332 (22%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
+A +FD + S +I G +K C +AI LF M I P + F +VL +
Sbjct: 239 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
+ ++ IG QLH K+G +S+ +V +AL+ LY L + A+ F + + V+Y
Sbjct: 299 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 183 ALVCGYLKRGRFEDALQVFHEM------PERNVVSWNAMVGGCSQTG------------- 223
L+ G + G E A+++F M P+ N ++ ++V CS G
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA--SLVVACSADGTLFRGQQLHAYTT 416
Query: 224 ----------------------HNEEAVNFF--------------------IDMLREGF- 240
E A+++F +D LR F
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 241 ----------IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYA 290
+P + T+PS++ ++ L +G++ H+ IK +L+ +V + LI YA
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 291 KCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
K G ++ + + + +++VS ++ GY Q
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 31/230 (13%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
++ +F +M +I PN++T+ ++L + L ++ +G Q+H+ K N +V S L+
Sbjct: 473 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI 532
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNA 214
D+Y KL G+ + A + ++VVSW
Sbjct: 533 DMYAKL-------------------------------GKLDTAWDILIRFAGKDVVSWTT 561
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCL 274
M+ G +Q +++A+ F ML G E + ++A A + AL G++ HA A
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 275 GKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
D+ N+L++ Y++CG +E+S L F + + ++ NA+V G+ Q+G
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 36/265 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS--- 121
A +FDE+ + T + +I A R+ + LF RM++ + PNE TF VL +
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+V +VV Q+HA GL + V + L+DLY + ++ A++ F
Sbjct: 199 GSVAFDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF----------- 245
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
D L++ ++ SW AM+ G S+ EA+ F DM G +
Sbjct: 246 --------------DGLRL------KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
PT F SV++A KI +L +G++ H +K D +V N+L+S Y G++ + +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 302 FNKLLKRNIVSCNAVVCGYAQNGRG 326
F+ + +R+ V+ N ++ G +Q G G
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYG 370
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 5/191 (2%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
++ GF + +E+A+ +F RM I N FTFG+ + +++ N+ G+Q+HA TK
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G S V +AL+ +Y K +I +A+K F + N VS+ A++ Y K G +AL
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDS 780
Query: 201 FHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITAAA 255
F +M NV V+ ++ CS G ++ + +F M E G P + V+
Sbjct: 781 FDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLT 840
Query: 256 KIAALGMGKRF 266
+ L K F
Sbjct: 841 RAGLLSRAKEF 851
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 33/218 (15%)
Query: 108 IRPNEFTFGTVLHSSTVLRNVVI-GRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEA 166
IRPN T +L + GR+LH+ K+GL SN + L D Y
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY--------- 130
Query: 167 QKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNE 226
L +G A +VF EMPER + +WN M+ +
Sbjct: 131 ----------------------LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIG 168
Query: 227 EAVNFFIDMLREGFIPTESTFPSVITAA-AKIAALGMGKRFHACAIKCLGKLDVFVGNSL 285
E F+ M+ E P E TF V+ A A + ++ HA + + V N L
Sbjct: 169 EVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPL 228
Query: 286 ISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
I Y++ G ++ + +F+ L ++ S A++ G ++N
Sbjct: 229 IDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 138/255 (54%), Gaps = 11/255 (4%)
Query: 77 GESATTII------CGFAKRHCHEDAIHLFSRM-LASKIRPNEFTFGTVLHSSTVLRNVV 129
E++TT++ G + + +A+ LF+ + + +RP++++ + ++ LR+ +
Sbjct: 15 AENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTI 74
Query: 130 IGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYL 189
G Q+H A + GL + V + LL LY +L + +K F + P+V S+T L+
Sbjct: 75 FGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASF 134
Query: 190 KRGRFEDALQVFHEMPERNVVS-WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFP 248
K G E A +VF +MPER+ V+ WNAM+ GC ++G++E +V F +M + G + F
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Query: 249 SVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK--LL 306
++++ +L GK+ H+ IK + V N+LI+ Y C + D+ L+F + +
Sbjct: 195 TILS-MCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 307 KRNIVSCNAVVCGYA 321
R+ V+ N V+ G A
Sbjct: 254 VRDQVTFNVVIDGLA 268
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 132/267 (49%), Gaps = 36/267 (13%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F A +F+ + + + T+I + + + A+ ++ RM ++P+EFTFG++L +
Sbjct: 339 FGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLAT 398
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
S L + + AC K GL+S + + +AL
Sbjct: 399 SLDLD---VLEMVQACIIKFGLSSKIEISNAL---------------------------- 427
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG-- 239
+ Y K G+ E A +F +N++SWNA++ G G E + F +L
Sbjct: 428 ---ISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR 484
Query: 240 FIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSL 299
+P T ++++ ++L +G + HA ++ + +GN+LI+ Y++CG++++SL
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 300 LMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+FN++ ++++VS N+++ Y+++G G
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEG 571
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 44/264 (16%)
Query: 65 ACHMFDEISDLTGESAT--TIICGFA--KRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
AC +F+E + T +I G A KR ++++ +F +ML + +RP + TF +V+
Sbjct: 243 ACLVFEETDVAVRDQVTFNVVIDGLAGFKR---DESLLVFRKMLEASLRPTDLTFVSVMG 299
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
S + +G Q+H A K G V +A + +Y S+ E+
Sbjct: 300 SCSC---AAMGHQVHGLAIKTGYEKYTLVSNATMTMY---SSFED--------------- 338
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
F A +VF + E+++V+WN M+ +Q + A++ + M G
Sbjct: 339 -------------FGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
P E TF S++ + + L M AC IK + + N+LIS Y+K G +E + L
Sbjct: 386 KPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADL 442
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG 324
+F + L++N++S NA++ G+ NG
Sbjct: 443 LFERSLRKNLISWNAIISGFYHNG 466
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIR--PNEFTFGTVLHSSTVLRNVVIGRQLHA 136
S II GF + + FS +L S++R P+ +T T+L ++++G Q HA
Sbjct: 454 SWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHA 513
Query: 137 CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFED 196
+ G +G+AL+++Y + TI+ + + F +VVS+ +L+ Y + G E+
Sbjct: 514 YVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 197 ALQVFHEMPER-----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLR-EGFIPTESTFPSV 250
A+ + M + + +++A++ CS G EE + F M+ G I F +
Sbjct: 574 AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCL 633
Query: 251 ITAAAKIAALGMGKRFHACAIKCLG-KLDVF 280
+ + L + + K +G ++DV+
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVW 664
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I G + HE ++ LF M +R ++F F T+L S ++ G+Q+H+ K G
Sbjct: 161 MITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDYGSLDFGKQVHSLVIKAG 219
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
F+ S++++ AL+ Y DA VF
Sbjct: 220 F----FIASSVVN---------------------------ALITMYFNCQVVVDACLVFE 248
Query: 203 E--MPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
E + R+ V++N ++ G + +E++ F ML PT+ TF SV+ + + A
Sbjct: 249 ETDVAVRDQVTFNVVIDGLAGF-KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA-- 305
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
MG + H AIK + V N+ ++ Y+ + +F L ++++V+ N ++ Y
Sbjct: 306 -MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSY 364
Query: 321 AQNGRG 326
Q G
Sbjct: 365 NQAKLG 370
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 143/320 (44%), Gaps = 40/320 (12%)
Query: 25 CRYITKTVHTHYHSLATKH---ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESAT 81
C + + H H K EN + +++ L A +FDE+S T + T
Sbjct: 34 CESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWT 93
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
+I F K A+ LF M+AS PNEFTF +V+ S LR++ G ++H K
Sbjct: 94 VMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT 153
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF 201
G N VGS+L DLY K +EA + F Q+ + +S+T ++ + ++ +ALQ
Sbjct: 154 GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQ-- 211
Query: 202 HEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALG 261
F+ +M++ G P E TF ++ A+ L
Sbjct: 212 -----------------------------FYSEMVKAGVPPNEFTFVKLL-GASSFLGLE 241
Query: 262 MGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYA 321
GK H+ I L+V + SL+ FY++ MED++ + N ++++ +VV G+
Sbjct: 242 FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 322 QNGR-----GGFTSWATLGL 336
+N R G F +LGL
Sbjct: 302 RNLRAKEAVGTFLEMRSLGL 321
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F+ AC +F + + S T +I +A+ +S M+ + + PNEFTF +L +
Sbjct: 175 FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA 234
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
S+ L + G+ +H+ G+ NV + ++L+D Y + S
Sbjct: 235 SSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS-------------------- 273
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
+ EDA++V + E++V W ++V G + +EAV F++M G
Sbjct: 274 -----------KMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQ 322
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME-DSLL 300
P T+ ++++ + + +L GK+ H+ IK + VGN+L+ Y KC + E ++
Sbjct: 323 PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR 382
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG 324
+F ++ N+VS ++ G +G
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHG 406
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S TT+I G +D L M+ ++ PN T VL + + LR+V ++HA
Sbjct: 394 SWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYL 453
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
+ + + VG++L+D Y ++ A + + ++YT+LV + + G+ E AL
Sbjct: 454 LRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMAL 513
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
V N M G +G + + P I+A+A +
Sbjct: 514 SVI-----------NYMYG--------------------DGIRMDQLSLPGFISASANLG 542
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
AL GK H ++K V NSL+ Y+KCGS+ED+ +F ++ ++VS N +V
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 319 GYAQNG 324
G A NG
Sbjct: 603 GLASNG 608
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 113/246 (45%), Gaps = 32/246 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+++ GF + ++A+ F M + ++PN FT+ +L + +R++ G+Q+H+ K
Sbjct: 294 TSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK 353
Query: 141 IGLASNVFVGSALLDLYVKLSTIE-EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQ 199
+G + VG+AL+D+Y+K S E EA + FG P
Sbjct: 354 VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP----------------------- 390
Query: 200 VFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAA 259
NVVSW ++ G G ++ ++M++ P T V+ A +K+
Sbjct: 391 --------NVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRH 442
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
+ HA ++ ++ VGNSL+ YA ++ + + + +R+ ++ ++V
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR 502
Query: 320 YAQNGR 325
+ + G+
Sbjct: 503 FNELGK 508
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+++ F + HE A+ + + M IR ++ + + +S L + G+ LH + K
Sbjct: 497 TSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVK 556
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G + V ++L+D+Y K ++E+A+K F + P+VVS+ LV G G AL
Sbjct: 557 SGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSA 616
Query: 201 FHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFF 232
F EM E + V++ ++ CS + + +F
Sbjct: 617 FEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF 652
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 13/255 (5%)
Query: 81 TTIICGFAKRH-CHEDAIHLFSRM---LASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHA 136
T++ GFAK C +AI +F M I ++FT T++ S L NV G QLH
Sbjct: 90 NTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHG 149
Query: 137 CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDT--QHPNVVSYTALVCGYLKRGRF 194
K G F S+L+ +Y K +E F + + + V+ A++ Y + G
Sbjct: 150 VLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDI 209
Query: 195 EDALQVFHEMPERN-VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA 253
+ AL VF PE N +SWN ++ G +Q G+ EEA+ + M G E +F +V+
Sbjct: 210 DKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNV 269
Query: 254 AAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSM---EDSLLMFNKLLKRNI 310
+ + +L +GK HA +K + FV + ++ Y KCG+M E + L++ N+
Sbjct: 270 LSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG---FGNL 326
Query: 311 VSCNAVVCGYAQNGR 325
S ++++ GY+ G+
Sbjct: 327 YSASSMIVGYSSQGK 341
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 132/252 (52%), Gaps = 11/252 (4%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T+I G+A+ E+A+ + M + ++ +E +FG VL+ + L+++ IG+++HA
Sbjct: 227 SWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARV 286
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K G SN FV S ++D+Y K ++ A+ A N+ S ++++ GY +G+ +A
Sbjct: 287 LKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAK 346
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFP------SVIT 252
++F + E+N+V W AM G + + L FI E+ P SV+
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLE-----LARAFIANETNTPDSLVMVSVLG 401
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVS 312
A + A + GK H +++ +D + + + Y+KCG++E + +F+ +R+ V
Sbjct: 402 ACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVM 461
Query: 313 CNAVVCGYAQNG 324
NA++ G A +G
Sbjct: 462 YNAMIAGCAHHG 473
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKR 191
R + + +T ++SN L++LY K + EA+ F + NV S+ A++ Y+K
Sbjct: 13 RSIKSGSTLTAVSSN-----QLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKF 67
Query: 192 GRFEDALQVFH-EMPERNVVSWNAMVGGCSQT-GHNEEAVNFFIDMLR---EGFIPTEST 246
++A ++F + ER+++++N ++ G ++T G EA+ F +M R + + T
Sbjct: 68 NNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFT 127
Query: 247 FPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
+++ +AK+ + G++ H +K F +SLI Y+KCG ++ +FN
Sbjct: 128 VTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSC 187
Query: 307 KR--NIVSCNAVVCGYAQNG 324
+ V+ NA++ Y + G
Sbjct: 188 VEFVDSVARNAMIAAYCREG 207
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIR-PNEFTFGTVLHSST 123
A +FD +S+ T + G+ + + L +A++ P+ +VL + +
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACS 404
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
+ + G+++H + + G+ + + +A +D+Y K +E A++
Sbjct: 405 LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAER--------------- 449
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
+F ER+ V +NAM+ GC+ GH ++ F DM GF P
Sbjct: 450 ----------------IFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPD 493
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIK 272
E TF ++++A + G+++ I+
Sbjct: 494 EITFMALLSACRHRGLVLEGEKYFKSMIE 522
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 156/315 (49%), Gaps = 5/315 (1%)
Query: 11 RLSVPTWITHQVVSCRYITKTVHTHYHSLATKHE-NTVVQKDIIPYGLDPTTFQVACHMF 69
RLS + + SC+ I H + T H+ + V ++I + A +F
Sbjct: 25 RLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVF 84
Query: 70 DEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVV 129
+S+ T +I GF D + L+ RM+ + + P+ + +VL + ++
Sbjct: 85 SYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLK 140
Query: 130 IGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYL 189
+ R++HA K+G S+ VG ++++Y K + A+K F + + V+ T ++ Y
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 190 KRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
+ G ++AL++F ++ ++ V W AM+ G + +A+ F +M E E T
Sbjct: 201 ECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 250 VITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRN 309
V++A + + AL +G+ H+ +L FVGN+LI+ Y++CG + ++ +F + ++
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 310 IVSCNAVVCGYAQNG 324
++S N ++ G A +G
Sbjct: 321 VISYNTMISGLAMHG 335
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 31/183 (16%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I G + A+ LF M + NEFT VL + + L + +GR +H+
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 283
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+ + FVG+AL+++Y + I EA++ V
Sbjct: 284 QRMELSNFVGNALINMYSRCGDINEARR-------------------------------V 312
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F M +++V+S+N M+ G + G + EA+N F DM+ GF P + T +++ A + L
Sbjct: 313 FRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLL 372
Query: 261 GMG 263
+G
Sbjct: 373 DIG 375
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 12/291 (4%)
Query: 36 YHSLATKHENTVVQKDI-IPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHE 94
+H + K NT+ + I DP+ A +FDEI + S ++ + + E
Sbjct: 84 FHGMRAK--NTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFE 141
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
A F RM + ++ T++ + R+L + N +A++
Sbjct: 142 KAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMI 193
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP-ERNVVSWN 213
Y++ +E+A F VV++TA++ GY+K + E A +F +M +N+V+WN
Sbjct: 194 SGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC 273
AM+ G + E+ + F ML EG P S S + ++++AL +G++ H K
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 274 LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
DV SLIS Y KCG + D+ +F + K+++V+ NA++ GYAQ+G
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+I G+ + ED + LF ML IRPN + L + L + +GRQ+H +K
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
L ++V ++L+ +Y K + +A K F + +VV++ A++ GY + G + AL +
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 201 FHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
F EM + + +++ A++ C+ G + +F M+R+
Sbjct: 373 FREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 151 SALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVV 210
S L+ + S + EA + F + P+ SY ++ Y++ FE A F MP ++
Sbjct: 97 SLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAA 156
Query: 211 SWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACA 270
SWN M+ G ++ G E+A F M+ + E ++ ++I+ + L F
Sbjct: 157 SWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHF---- 208
Query: 271 IKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL-LKRNIVSCNAVVCGYAQNGR 325
K V ++I+ Y K +E + MF + + +N+V+ NA++ GY +N R
Sbjct: 209 FKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSR 264
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 173 TQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQ-TGHNEEAVNF 231
+ + ++ ++ G + AL+VFH M +N ++WN+++ G S+ EA
Sbjct: 56 SDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQL 115
Query: 232 FIDMLREGFIPTESTFPSVITAAAKIAALGMGKR---FHACAIKCLGKLDVFVGNSLISF 288
F + IP TF I + + + K F K D N++I+
Sbjct: 116 FDE------IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-----DAASWNTMITG 164
Query: 289 YAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
YA+ G ME + +F ++++N VS NA++ GY + G
Sbjct: 165 YARRGEMEKARELFYSMMEKNEVSWNAMISGYIECG 200
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 33/274 (12%)
Query: 55 YGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFT 114
Y T + AC +F +I + TT+I GF + ++ +ML +
Sbjct: 156 YATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYC 215
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ 174
+ +S + +V G+Q+HA K G SN+ V +++LDLY +
Sbjct: 216 ITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCR--------------- 260
Query: 175 HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFID 234
CGYL +A FHEM ++++++WN ++ ++ + EA+ F
Sbjct: 261 -----------CGYLS-----EAKHYFHEMEDKDLITWNTLISELERS-DSSEALLMFQR 303
Query: 235 MLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGS 294
+GF+P TF S++ A A IAAL G++ H + +V + N+LI YAKCG+
Sbjct: 304 FESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGN 363
Query: 295 MEDSLLMFNKLL-KRNIVSCNAVVCGYAQNGRGG 327
+ DS +F +++ +RN+VS +++ GY +G G
Sbjct: 364 IPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
T L+ Y ++G E+A +F EMP+R+VV+W AM+ G + + +N A F +M+++G
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCG-SMEDSLL 300
P E T SV+ + + L G H +K + ++V N++++ YA C +ME + L
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNGRG 326
+F + +N V+ ++ G+ G G
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDG 194
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A H F E+ D + T+I + E A+ +F R + PN +TF +++ +
Sbjct: 267 AKHYFHEMEDKDLITWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACAN 325
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ + G+QLH + G NV + +AL+D+Y K
Sbjct: 326 IAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKC------------------------ 361
Query: 185 VCGYLKRGRFEDALQVFHEMPER-NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
G D+ +VF E+ +R N+VSW +M+ G G+ EAV F M+ G P
Sbjct: 362 -------GNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPD 414
Query: 244 ESTFPSVITA 253
F +V++A
Sbjct: 415 RIVFMAVLSA 424
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 130/260 (50%), Gaps = 32/260 (12%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F E+SD + S T++I G+A+ +A+ LF M I P+ +T VL+ R
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ G+++H + L ++FV +AL+D+Y K +++EA+
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE-------------------- 452
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG-FIPTEST 246
VF EM ++++SWN ++GG S+ + EA++ F +L E F P E T
Sbjct: 453 -----------LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 247 FPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
V+ A A ++A G+ H ++ D V NSL+ YAKCG++ + ++F+ +
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 307 KRNIVSCNAVVCGYAQNGRG 326
+++VS ++ GY +G G
Sbjct: 562 SKDLVSWTVMIAGYGMHGFG 581
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 44 ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM 103
E V ++ + L A +FDE+++ S +II G+ E + +F +M
Sbjct: 228 ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 104 LASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTI 163
L S I + T +V R + +GR +H+ K + + LLD+Y K
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK---- 343
Query: 164 EEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTG 223
CG L + A VF EM +R+VVS+ +M+ G ++ G
Sbjct: 344 ----------------------CGDL-----DSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 224 HNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN 283
EAV F +M EG P T +V+ A+ L GKR H + D+FV N
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
+L+ YAKCGSM+++ L+F+++ ++I+S N ++ GY++N
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKN 476
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 33/267 (12%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+ A +FDE+ ++ AK +I LF +M++S + + +TF V S
Sbjct: 145 LKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKS 204
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ LR+V G QLH K G VG++L+ AF
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLV--------------AF----------- 239
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
YLK R + A +VF EM ER+V+SWN+++ G G E+ ++ F+ ML G
Sbjct: 240 ------YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIK-CLGKLDVFVGNSLISFYAKCGSMEDSLL 300
+T SV A + +G+ H+ +K C + D F N+L+ Y+KCG ++ +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKA 352
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNGRGG 327
+F ++ R++VS +++ GYA+ G G
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAG 379
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 6/212 (2%)
Query: 61 TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK-IRPNEFTFGTVL 119
+ Q A +F E+ S TII G++K +A+ LF+ +L K P+E T VL
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
+ L GR++H + G S+ V ++L+D+Y K + A F D ++V
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
S+T ++ GY G ++A+ +F++M E + +S+ +++ CS +G +E FF M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 236 LREGFI-PTESTFPSVITAAAKIAALGMGKRF 266
E I PT + ++ A+ L RF
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRF 658
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 71/137 (51%)
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y G ++A +VF E+ + WN ++ +++G ++ F M+ G TF
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
V + + + ++ G++ H +K VGNSL++FY K ++ + +F+++ +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 308 RNIVSCNAVVCGYAQNG 324
R+++S N+++ GY NG
Sbjct: 259 RDVISWNSIINGYVSNG 275
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 140/265 (52%), Gaps = 37/265 (13%)
Query: 67 HMFDEISDLTGESATTI-ICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVL 125
+F+++ D+ ++ + I F++ AI LF+RML +R +EF+ ++L +VL
Sbjct: 407 QVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVL 463
Query: 126 RNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALV 185
+ +G+Q+H K GL ++ VGS+L LY K ++EE+ K
Sbjct: 464 DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK----------------- 506
Query: 186 CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
+F +P ++ W +M+ G ++ G+ EA+ F +ML +G P ES
Sbjct: 507 --------------LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDES 552
Query: 246 TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
T +V+T + +L GK H ++ + +G++L++ Y+KCGS++ + ++++L
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRL 612
Query: 306 LKRNIVSCNAVVCGYAQNG--RGGF 328
+ + VSC++++ GY+Q+G + GF
Sbjct: 613 PELDPVSCSSLISGYSQHGLIQDGF 637
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 112/211 (53%), Gaps = 5/211 (2%)
Query: 61 TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
+ ++A ++D + +L S +++I G+++ +D LF M+ S + F ++L
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
++ + +G Q+HA TKIGL + VGS+LL +Y K +I++ KAF P++++
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIA 720
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
+TAL+ Y + G+ +ALQV++ M E+ + V++ ++ CS G EE+ M+
Sbjct: 721 WTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV 780
Query: 237 RE-GFIPTESTFPSVITAAAKIAALGMGKRF 266
++ G P + ++ A + L + F
Sbjct: 781 KDYGIEPENRHYVCMVDALGRSGRLREAESF 811
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 129/295 (43%), Gaps = 32/295 (10%)
Query: 29 TKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFA 88
TK + H + + K ++ + + + A +FD I S +I G+
Sbjct: 67 TKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK 126
Query: 89 KRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVF 148
+ E+++ FS+M NE ++G+V+ + + L+ + + K+G
Sbjct: 127 QHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV 186
Query: 149 VGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERN 208
V SAL+D++ K N+ RFEDA +VF + N
Sbjct: 187 VESALIDVFSK-----------------NL--------------RFEDAYKVFRDSLSAN 215
Query: 209 VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHA 268
V WN ++ G + + + F +M P T+ SV+ A A + L GK A
Sbjct: 216 VYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQA 275
Query: 269 CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
IKC G DVFV +++ YAKCG M +++ +F+++ ++VS ++ GY ++
Sbjct: 276 RVIKC-GAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKS 329
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 31/245 (12%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
++I GF + +AI LFS ML P+E T VL + ++ G+++H +
Sbjct: 521 SMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA 580
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF 201
G+ + +GSAL+++Y K CG LK R QV+
Sbjct: 581 GIDKGMDLGSALVNMYSK--------------------------CGSLKLAR-----QVY 609
Query: 202 HEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALG 261
+PE + VS ++++ G SQ G ++ F DM+ GF S++ AAA
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESS 669
Query: 262 MGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYA 321
+G + HA K + VG+SL++ Y+K GS++D F+++ ++++ A++ YA
Sbjct: 670 LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 322 QNGRG 326
Q+G+
Sbjct: 730 QHGKA 734
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 37/250 (14%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TII G + + LF M +P+ +T+ +VL + L + G+ + A K
Sbjct: 220 NTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIK 279
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G A +VFV +A++DLY K + EA + F +P+VVS+T ++ GY K AL++
Sbjct: 280 CG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEI 338
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F EM V + C+ T SVI+A + + +
Sbjct: 339 FKEMRHSGV-----EINNCTVT--------------------------SVISACGRPSMV 367
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL---LKRNIVSCNAVV 317
+ HA K LD V +LIS Y+K G ++ S +F L ++NIV N ++
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMI 425
Query: 318 CGYAQNGRGG 327
++Q+ + G
Sbjct: 426 TSFSQSKKPG 435
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
+L+ Y G DA ++F +P+ +VVS N M+ G Q EE++ FF M GF
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
E ++ SVI+A + + A + IK V ++LI ++K ED+ +F
Sbjct: 149 NEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVF 208
Query: 303 NKLLKRNIVSCNAVVCGYAQNGRGG 327
L N+ N ++ G +N G
Sbjct: 209 RDSLSANVYCWNTIIAGALRNQNYG 233
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
N ++ +I L + A +FD IS S T +I F++ H DA+ LF M
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH 105
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
++ N+FT+G+VL S L + G Q+H K A N+ V SALL LY +
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYAR----- 160
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
CG ++ R + F M ER++VSWNAM+ G +
Sbjct: 161 ---------------------CGKMEEARLQ-----FDSMKERDLVSWNAMIDGYTANAC 194
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC-LGKLDVFVGN 283
+ + + F ML EG P TF S++ A+ + L + H AIK G+ +
Sbjct: 195 ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI-R 253
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
SL++ Y KCGS+ ++ + KR+++SC A++ G++Q
Sbjct: 254 SLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQ 293
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 128/258 (49%), Gaps = 33/258 (12%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
FD + + S +I G+ C + + LF ML +P+ FTFG++L +S V++ +
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCL 230
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
I +LH A K+G + SAL+ +LV Y
Sbjct: 231 EIVSELHGLAIKLGFGRS----SALI---------------------------RSLVNAY 259
Query: 189 LKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH-NEEAVNFFIDMLREGFIPTESTF 247
+K G +A ++ +R+++S A++ G SQ + +A + F DM+R E
Sbjct: 260 VKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVV 319
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLG-KLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
S++ IA++ +G++ H A+K + DV +GNSLI YAK G +ED++L F ++
Sbjct: 320 SSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK 379
Query: 307 KRNIVSCNAVVCGYAQNG 324
++++ S +++ GY ++G
Sbjct: 380 EKDVRSWTSLIAGYGRHG 397
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
YLK+G + A ++F + +R+VVSW AM+ S+ G++ +A+ F +M RE + T+
Sbjct: 57 YLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTY 116
Query: 248 PSVITAAAKIAALGMGKRFHACAIK--CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
SV+ + + L G + H K C G L V ++L+S YA+CG ME++ L F+ +
Sbjct: 117 GSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNL--IVRSALLSLYARCGKMEEARLQFDSM 174
Query: 306 LKRNIVSCNAVVCGYAQNG 324
+R++VS NA++ GY N
Sbjct: 175 KERDLVSWNAMIDGYTANA 193
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 33/195 (16%)
Query: 79 SATTIICGFAKRH-CHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHAC 137
S T +I GF++++ C DA +F M+ K + +E ++L T + +V IGRQ+H
Sbjct: 282 SCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGF 341
Query: 138 ATKIG-LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFED 196
A K + +V +G++L+D+Y K G ED
Sbjct: 342 ALKSSQIRFDVALGNSLIDMYAK-------------------------------SGEIED 370
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A+ F EM E++V SW +++ G + G+ E+A++ + M E P + TF S+++A +
Sbjct: 371 AVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSH 430
Query: 257 IAALGMGKRFHACAI 271
+G + + I
Sbjct: 431 TGQTELGWKIYDTMI 445
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 130/266 (48%), Gaps = 34/266 (12%)
Query: 62 FQVACHMFDEISD---LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTV 118
+A +FD+++D LT + + G+++ DA+ ++ ML S I P F+
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVA 242
Query: 119 LHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNV 178
L + L+++ +GR +HA ++ +K +
Sbjct: 243 LKACVDLKDLRVGRGIHA------------------------QIVKRKEKV-------DQ 271
Query: 179 VSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
V Y L+ Y++ G F+DA +VF M ERNVV+WN+++ S+ E N F M E
Sbjct: 272 VVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEE 331
Query: 239 GFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDS 298
+ +T +++ A +++AAL GK HA +K K DV + NSL+ Y KCG +E S
Sbjct: 332 MIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYS 391
Query: 299 LLMFNKLLKRNIVSCNAVVCGYAQNG 324
+F+ +L +++ S N ++ YA NG
Sbjct: 392 RRVFDVMLTKDLASWNIMLNCYAING 417
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
+ VV ++ ++ F A +FD +S+ + ++I +K+ + +LF +M
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
I + T T+L + + + ++ G+++HA K +V + ++L+D+Y K +E
Sbjct: 330 EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVE 389
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCS 220
+++ F ++ S+ ++ Y G E+ + +F M E V +++ A++ GCS
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
Query: 221 QTGHNEEAVNFFIDMLRE 238
TG E ++ F M E
Sbjct: 450 DTGLTEYGLSLFERMKTE 467
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 193 RFEDALQVFHEMPERNVVS---WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
R + A ++F ++ + ++++ W AM G S+ G +A+ ++DML P +
Sbjct: 182 RLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISV 241
Query: 250 VITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRN 309
+ A + L +G+ HA +K K+D V N L+ Y + G +D+ +F+ + +RN
Sbjct: 242 ALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERN 301
Query: 310 IVSCNAVVCGYAQNGR 325
+V+ N+++ ++ R
Sbjct: 302 VVTWNSLISVLSKKVR 317
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 134/262 (51%), Gaps = 8/262 (3%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
AC +++ I D + T++I G K ++A +F M + T+ T++
Sbjct: 160 ACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQ 215
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
V R++ + S +++L YV+ IE+A++ F V++ A+
Sbjct: 216 NNRVDDARKIFDVMPEKTEVS----WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAM 271
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+ G ++G A +VF M ERN SW ++ + G EA++ FI M ++G PT
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T S+++ A +A+L GK+ HA ++C +DV+V + L++ Y KCG + S L+F++
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 305 LLKRNIVSCNAVVCGYAQNGRG 326
++I+ N+++ GYA +G G
Sbjct: 392 FPSKDIIMWNSIISGYASHGLG 413
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
+A+K F + N++S+ LV GY+K G ++A +VF MPERNVVSW A+V G G
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI-KCLGKLDVFVGN 283
+ A + F M P ++ + I L G+ AC + + + D
Sbjct: 126 VDVAESLFWKM------PEKNKVSWTVML---IGFLQDGRIDDACKLYEMIPDKDNIART 176
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
S+I K G ++++ +F+++ +R++++ +V GY QN R
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 146 NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
N+ + L+ Y+K I+EA+K F NVVS+TALV GY+ G+ + A +F +MP
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 206 ERNVVSWNAMVGGCSQTGHNEEAVNFF-----------------------IDMLREGFIP 242
E+N VSW M+ G Q G ++A + +D RE F
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF-- 195
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACA--IKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
E + SVIT + G R + + S++ Y + G +ED+
Sbjct: 196 DEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEE 255
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG 324
+F + + +++CNA++ G Q G
Sbjct: 256 LFEVMPVKPVIACNAMISGLGQKG 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD + + S T+I + +A+ LF M +RP T ++L
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCAS 343
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L ++ G+Q+HA + +V+V S L+ +Y+K + +++ F +++ + ++
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 185 VCGYLKRGRFEDALQVFHEMP-----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG 239
+ GY G E+AL+VF EMP + N V++ A + CS G EE + + M
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM---- 459
Query: 240 FIPTESTF---PSVITAAAKIAALGMGKRFH 267
ES F P A + LG RF+
Sbjct: 460 ----ESVFGVKPITAHYACMVDMLGRAGRFN 486
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 131/263 (49%), Gaps = 37/263 (14%)
Query: 68 MFDEI-SDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKI-RPNEFTFGTVLHSSTVL 125
+FD SD + +I GF+ ++I ++RML S + RP+ FTF L S +
Sbjct: 61 LFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERI 120
Query: 126 RNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALV 185
+++ ++H + G + V T+LV
Sbjct: 121 KSIPKCLEIHGSVIRSGFLDDAIVA-------------------------------TSLV 149
Query: 186 CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
Y G E A +VF EMP R++VSWN M+ S G + +A++ + M EG
Sbjct: 150 RCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSY 209
Query: 246 TFPSVITAAAKIAALGMGKRFH--ACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
T +++++ A ++AL MG H AC I+C + VFV N+LI YAKCGS+E+++ +FN
Sbjct: 210 TLVALLSSCAHVSALNMGVMLHRIACDIRC--ESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 304 KLLKRNIVSCNAVVCGYAQNGRG 326
+ KR++++ N+++ GY +G G
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHG 290
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 32/242 (13%)
Query: 61 TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
+ ++A +FDE+ S +IC F+ H A+ ++ RM + + +T +L
Sbjct: 157 SVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLS 216
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
S + + +G LH A I S VFV +AL+D+Y K
Sbjct: 217 SCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAK--------------------- 255
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
CG L E+A+ VF+ M +R+V++WN+M+ G GH EA++FF M+ G
Sbjct: 256 -----CGSL-----ENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV 305
Query: 241 IPTESTFPSVITAAAKIAALGMG-KRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSL 299
P TF ++ + + G + F + + +V ++ Y + G +E+SL
Sbjct: 306 RPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSL 365
Query: 300 LM 301
M
Sbjct: 366 EM 367
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Query: 159 KLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF-HEMPERNVVSWNAMVG 217
KL I G HP++ ++ C G A +F H + + WN ++
Sbjct: 20 KLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIR 79
Query: 218 GCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGK 276
G S + ++ F+ ML P TF + + +I ++ H I+
Sbjct: 80 GFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFL 139
Query: 277 LDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
D V SL+ Y+ GS+E + +F+++ R++VS N ++C ++ G
Sbjct: 140 DDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 2/234 (0%)
Query: 98 HLFSRMLASKIRPNEFTFGTVLHSSTVLRN--VVIGRQLHACATKIGLASNVFVGSALLD 155
F M + P+ TF V + +N + + + LH A + GL S++F + L+
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIR 160
Query: 156 LYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAM 215
+Y ++ I+ A + F + +VV+Y L+ G +K A ++F MP R++VSWN++
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG 275
+ G +Q H EA+ F +M+ G P S ++A A+ GK H +
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 276 KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFT 329
+D F+ L+ FYAKCG ++ ++ +F + + + NA++ G A +G G T
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELT 334
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 49 QKDIIPYGL------DPTTFQVACHMFDEISDLTGESATTIICGFAK-RHCHEDAIHLFS 101
Q+D++ Y + A +FD + S ++I G+A+ HC E AI LF
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCRE-AIKLFD 238
Query: 102 RMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLS 161
M+A ++P+ + L + + G+ +H + L + F+ + L+D Y K
Sbjct: 239 EMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCG 298
Query: 162 TIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVG 217
I+ A + F + ++ A++ G G E + F +M + V++ +++
Sbjct: 299 FIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLV 358
Query: 218 GCSQTGHNEEAVNFFIDM 235
GCS +G +EA N F M
Sbjct: 359 GCSHSGLVDEARNLFDQM 376
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 123/268 (45%), Gaps = 34/268 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +F ++ S TT+ICG + +A+ LF ML I+ F V+ +
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+G Q+H K+G +V ++L+ Y
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCK----------------------- 274
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
R D+ +VF E V W A++ G S +E+A++ F MLR +P +
Sbjct: 275 --------RIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQ 326
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
STF S + + + + L GK H A+K + D FVGNSL+ Y+ G++ D++ +F K
Sbjct: 327 STFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK 386
Query: 305 LLKRNIVSCNAVVCGYAQNGRGGFTSWA 332
+ K++IVS N+++ G AQ+GRG WA
Sbjct: 387 IFKKSIVSWNSIIVGCAQHGRG---KWA 411
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 119/241 (49%), Gaps = 12/241 (4%)
Query: 97 IHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLAS----------- 145
+ L+++M+ R N L +R+VV + + + G +
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 146 -NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
+V +A+++ + +++A++ F + ++ ++V GYL+ G+ +DAL++F +M
Sbjct: 126 RSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQM 185
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
P +NV+SW M+ G Q + EA++ F +MLR T F VITA A A MG
Sbjct: 186 PGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGI 245
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ H IK + +V SLI+FYA C + DS +F++ + + A++ GY+ N
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 325 R 325
+
Sbjct: 306 K 306
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 163 IEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQT 222
I+EA++ F P+V YT ++ GY + R DAL +F EMP R+VVSWN+M+ GC +
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR-FHACAIKCLGKLDVFV 281
G AV F +M + ++ +++ + + +R F+ +K D
Sbjct: 111 GDMNTAVKLFDEMPERSVV----SWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAA 161
Query: 282 GNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGG 327
NS++ Y + G ++D+L +F ++ +N++S ++CG QN R G
Sbjct: 162 WNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSG 207
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FDE T ++ G++ HEDA+ +FS ML + I PN+ TF + L+S + L
Sbjct: 282 VFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGT 341
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ G+++H A K+GL ++ FVG++L+ +Y + +A F ++VS+ +++ G
Sbjct: 342 LDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVG 401
Query: 188 YLKRGRFEDALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
+ GR + A +F +M E + +++ ++ CS G E+ F M
Sbjct: 402 CAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 36/299 (12%)
Query: 59 PTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTV 118
P + A +FDEI ++ G A+ E + L++ M + P+ +TF V
Sbjct: 59 PGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFV 118
Query: 119 LHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNV 178
L + + L G H + G N +V +AL+ + + A + F D+ +
Sbjct: 119 LKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHK 178
Query: 179 VSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQ----------------- 221
V+++++ GY KRG+ ++A+++F EMP ++ V+WN M+ GC +
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEK 238
Query: 222 --------------TGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFH 267
G+ +EA+ F +M G P T S+++A A + L GKR H
Sbjct: 239 DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH 298
Query: 268 ACAIKCLG-KLDVFVG----NSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYA 321
++ ++VG N+LI YAKCGS++ ++ +F + R++ + N ++ G A
Sbjct: 299 IYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA 357
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 29/200 (14%)
Query: 126 RNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALV 185
+N+ +Q+HA GL SN+ V L + S + V
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGEL------------------------IYSASLSV 58
Query: 186 CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
G LK A ++F E+P+ +V N ++ G +Q+ E+ V+ + +M + G P
Sbjct: 59 PGALKY-----AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRY 113
Query: 246 TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
TF V+ A +K+ G FH ++ L+ +V N+LI F+A CG + + +F+
Sbjct: 114 TFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDS 173
Query: 306 LKRNIVSCNAVVCGYAQNGR 325
K + V+ +++ GYA+ G+
Sbjct: 174 AKAHKVAWSSMTSGYAKRGK 193
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 118/256 (46%), Gaps = 36/256 (14%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD ++ + +I G+ ++A+ +F M + P+ T ++L + V
Sbjct: 228 ARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 125 LRNVVIGRQLHACATKIG-LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
L ++ G++LH + ++S+++VG+ + + A
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPI---------------------------WNA 320
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
L+ Y K G + A++VF + +R++ +WN ++ G + H E ++ F +M R P
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA-LHHAEGSIEMFEEMQRLKVWPN 379
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNS--LISFYAKCGSMEDSLLM 301
E TF VI A + + G+++ + ++ + ++ + + ++ + G +E++ M
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSL-MRDMYNIEPNIKHYGCMVDMLGRAGQLEEA-FM 437
Query: 302 FNKLLKRNIVSCNAVV 317
F + +K + NA+V
Sbjct: 438 FVESMK---IEPNAIV 450
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 32/247 (12%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASK-IRPNEFTFGTVLHSSTVLRNVVIGRQLHACAT 139
T+I G+A+ A L+ M S + P+ T+ ++ + T + +V +G +H+
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQ 199
+ G S ++V ++LL LY CG + A +
Sbjct: 149 RSGFGSLIYVQNSLLHLYAN--------------------------CGDVA-----SAYK 177
Query: 200 VFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAA 259
VF +MPE+++V+WN+++ G ++ G EEA+ + +M +G P T S+++A AKI A
Sbjct: 178 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 237
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
L +GKR H IK ++ N L+ YA+CG +E++ +F++++ +N VS +++ G
Sbjct: 238 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 297
Query: 320 YAQNGRG 326
A NG G
Sbjct: 298 LAVNGFG 304
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD++ + + ++I GFA+ E+A+ L++ M + I+P+ FT ++L +
Sbjct: 175 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 234
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ + +G+++H K+GL N+ + LLDLY + +EEA+ F + N VS+T+L
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294
Query: 185 VCGYLKRGRFEDALQVFHEMPERN-----VVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
+ G G ++A+++F M +++ ++ CS G +E +F M E
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 353
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIAALGMGKRF 266
NV WN ++ G ++ G++ A + + +M G + P T+P +I A +A + +G+
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 267 HACAIKC-LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
H+ I+ G L ++V NSL+ YA CG + + +F+K+ ++++V+ N+V+ G+A+NG+
Sbjct: 144 HSVVIRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 38/304 (12%)
Query: 28 ITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEI---SDLTGESATTII 84
+ K VH L +HE T+ I Y D + A +FD + DL S ++I
Sbjct: 221 LLKQVHAKVLKLGLQHEITICNAMISSYA-DCGSVSDAKRVFDGLGGSKDLI--SWNSMI 277
Query: 85 CGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA 144
GF+K E A LF +M + + +T+ +L + + + + G+ LH K GL
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
+AL+ +Y++ T G EDAL +F +
Sbjct: 338 QVTSATNALISMYIQFPT-----------------------------GTMEDALSLFESL 368
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES-TFPSVITAAAKIAALGMG 263
++++SWN+++ G +Q G +E+AV FF LR I + F +++ + + +A L +G
Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFF-SYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427
Query: 264 KRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL-LKRNIVSCNAVVCGYAQ 322
++ HA A K + FV +SLI Y+KCG +E + F ++ K + V+ NA++ GYAQ
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 487
Query: 323 NGRG 326
+G G
Sbjct: 488 HGLG 491
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 115/209 (55%), Gaps = 11/209 (5%)
Query: 59 PT-TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
PT T + A +F+ + S +II GFA++ EDA+ FS + +S+I+ +++ F
Sbjct: 354 PTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSA 413
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGD-TQHP 176
+L S + L + +G+Q+HA ATK G SN FV S+L+ +Y K IE A+K F +
Sbjct: 414 LLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH 473
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFF 232
+ V++ A++ GY + G + +L +F +M +NV V++ A++ CS TG +E +
Sbjct: 474 STVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLE-L 532
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAALG 261
++++ P P + AA + LG
Sbjct: 533 LNLME----PVYKIQPRMEHYAAAVDLLG 557
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FDE+ S T+I G+ EDA LF+ M S + ++F +L ++
Sbjct: 57 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 116
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+G Q+H K G NV+VGS+L+D+Y K +E+A +AF + PN VS+ AL+ G
Sbjct: 117 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 176
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
+++ + A + M + V+ +A TF
Sbjct: 177 FVQVRDIKTAFWLLGLMEMKAAVTMDA------------------------------GTF 206
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL-L 306
++T + K+ HA +K + ++ + N++IS YA CGS+ D+ +F+ L
Sbjct: 207 APLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 307 KRNIVSCNAVVCGYAQN 323
++++S N+++ G++++
Sbjct: 267 SKDLISWNSMIAGFSKH 283
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 32/202 (15%)
Query: 135 HACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRF 194
H A K G S+++V + +LD Y+K FG + N++
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIK----------FGFLGYANML--------------- 57
Query: 195 EDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
F EMP+R+ VSWN M+ G + G E+A F M R G +F ++
Sbjct: 58 ------FDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGI 111
Query: 255 AKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCN 314
A + +G++ H IK + +V+VG+SL+ YAKC +ED+ F ++ + N VS N
Sbjct: 112 ASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWN 171
Query: 315 AVVCGYAQNGRGGFTSWATLGL 336
A++ G+ Q R T++ LGL
Sbjct: 172 ALIAGFVQV-RDIKTAFWLLGL 192
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 157/321 (48%), Gaps = 14/321 (4%)
Query: 10 SRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPT-TFQVACHM 68
SR +V TW +VS +K + E VV + + G + A +
Sbjct: 105 SRKNVVTWTA--MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
FDE+ + S +++ +R ++A++LF RM R + ++ ++ V
Sbjct: 163 FDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM----PRRDVVSWTAMVDGLAKNGKV 218
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
R+L C + N+ +A++ Y + + I+EA + F + S+ ++ G+
Sbjct: 219 DEARRLFDCMPE----RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGF 274
Query: 189 LKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTF 247
++ A +F MPE+NV+SW M+ G + NEEA+N F MLR+G + P T+
Sbjct: 275 IRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL- 306
S+++A + +A L G++ H K + + + V ++L++ Y+K G + + MF+ L
Sbjct: 335 VSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV 394
Query: 307 -KRNIVSCNAVVCGYAQNGRG 326
+R+++S N+++ YA +G G
Sbjct: 395 CQRDLISWNSMIAVYAHHGHG 415
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKR 191
R+ ++ NV +A++ Y++ + A+ F + NVVS+ ++ GY +
Sbjct: 94 REARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQS 153
Query: 192 GRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
GR + AL++F EMPERN+VSWN+MV Q G +EA+N F M R + ++ +++
Sbjct: 154 GRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMV 209
Query: 252 TAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
AK + +R C+ + ++ N++I+ YA+ ++++ +F + +R+
Sbjct: 210 DGLAKNGKVDEARRL----FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA 265
Query: 312 SCNAVVCGYAQN 323
S N ++ G+ +N
Sbjct: 266 SWNTMITGFIRN 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 106/185 (57%), Gaps = 7/185 (3%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSST 123
AC +FD + + S TT+I G+ + +E+A+++FS+ML ++PN T+ ++L + +
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF--GDTQHPNVVSY 181
L +V G+Q+H +K N V SALL++Y K + A+K F G +++S+
Sbjct: 343 DLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 182 TALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
+++ Y G ++A++++++M + + V++ ++ CS G E+ + FF D++R
Sbjct: 403 NSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Query: 238 EGFIP 242
+ +P
Sbjct: 463 DESLP 467
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 170 FGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAV 229
+ + P V L+ K G+ +A ++F +PER+VV+W ++ G + G EA
Sbjct: 38 YSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREA- 96
Query: 230 NFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI--KCLGKLDVFVGNSLIS 287
RE F +S +V+T A ++ K+ + + + + +V N++I
Sbjct: 97 -------RELFDRVDSR-KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMID 148
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
YA+ G ++ +L +F+++ +RNIVS N++V Q GR
Sbjct: 149 GYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGR 186
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 127/248 (51%), Gaps = 31/248 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T I+ +A+ +A+ +FS+M ++P+ +VL++ T L+++ GR +HA
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K+GL DL + L+T+ Y K G+ A
Sbjct: 249 VKMGLEIEP-------DLLISLNTM------------------------YAKCGQVATAK 277
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
+F +M N++ WNAM+ G ++ G+ EA++ F +M+ + P + S I+A A++
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
+L + + + + DVF+ ++LI +AKCGS+E + L+F++ L R++V +A++
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 319 GYAQNGRG 326
GY +GR
Sbjct: 398 GYGLHGRA 405
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 132/263 (50%), Gaps = 35/263 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD++ II G+++ + +DA+ ++S M +++ P+ FTF +L + +
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN--VVSYT 182
L ++ +GR +HA ++G ++VFV + L+ LY K + A+ F P +VS+T
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNV-VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
A+V Y + G +AL++F +M + +V W A+V
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALV------------------------- 226
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
SV+ A + L G+ HA +K +++ + SL + YAKCG + + ++
Sbjct: 227 -------SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKIL 279
Query: 302 FNKLLKRNIVSCNAVVCGYAQNG 324
F+K+ N++ NA++ GYA+NG
Sbjct: 280 FDKMKSPNLILWNAMISGYAKNG 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD++ +I G+AK +AI +F M+ +RP+ + + + + + +
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ R ++ + +VF+ SAL+D++ K ++E A+ F T +VV ++A++ G
Sbjct: 339 LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVG 398
Query: 188 YLKRGRFEDALQVFHEMPER-----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
Y GR +A+ ++ M ER N V++ ++ C+ +G E FF M P
Sbjct: 399 YGLHGRAREAISLYRAM-ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINP 457
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCL 274
+ + VI + L IKC+
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYE----VIKCM 485
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 32/244 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T++I G+ K E+ + LF+RM + + NE+T+GT++ + T L + G+ H C K
Sbjct: 211 TSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVK 270
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G+ + + ++LLD+YVK I A++ F + H ++V +TA++ GY G +AL +
Sbjct: 271 SGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSL 330
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F +M + P T SV++ I L
Sbjct: 331 FQKMKGVEIK-------------------------------PNCVTIASVLSGCGLIENL 359
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
+G+ H +IK +G D V N+L+ YAKC D+ +F +++IV+ N+++ G+
Sbjct: 360 ELGRSVHGLSIK-VGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 321 AQNG 324
+QNG
Sbjct: 419 SQNG 422
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 128/262 (48%), Gaps = 34/262 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +F+E S + T +I G+ +A+ LF +M +I+PN T +VL +
Sbjct: 296 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGL 355
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ N+ +GR +H + K+G+ + V +AL+ +Y K
Sbjct: 356 IENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKC------------------------ 390
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
Y R DA VF E+++V+WN+++ G SQ G EA+ F M E P
Sbjct: 391 ---YQNR----DAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKC--LGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
T S+ +A A + +L +G HA ++K L V VG +L+ FYAKCG + + L+F
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503
Query: 303 NKLLKRNIVSCNAVVCGYAQNG 324
+ + ++N ++ +A++ GY + G
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQG 525
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 32/230 (13%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
+ + L+ ++ R ++ F L + T L+++ G+++H K+ NV V + LL
Sbjct: 125 EVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLL 183
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNA 214
D+Y K I+ A K F D NVV +T+++ GY+K E+ L +F+ M E NV+
Sbjct: 184 DMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG--- 240
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCL 274
E T+ ++I A K++AL GK FH C +K
Sbjct: 241 ----------------------------NEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 275 GKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+L + SL+ Y KCG + ++ +FN+ ++V A++ GY NG
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG 322
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 42/256 (16%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A ++F+ S+ + +II GF++ +A+ LF RM + + PN T ++ +
Sbjct: 396 AKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACAS 455
Query: 125 LRNVVIGRQLHACATKIGL--ASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
L ++ +G LHA + K+G +S+V VG+ALLD Y K
Sbjct: 456 LGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAK----------------------- 492
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
CG + R +F + E+N ++W+AM+GG + G ++ F +ML++ P
Sbjct: 493 ---CGDPQSARL-----IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP 544
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNS-----LISFYAKCGSMED 297
ESTF S+++A + GK++ + K F ++ ++ A+ G +E
Sbjct: 545 NESTFTSILSACGHTGMVNEGKKYFSSMYKDYN----FTPSTKHYTCMVDMLARAGELEQ 600
Query: 298 SLLMFNKLLKRNIVSC 313
+L + K+ + V C
Sbjct: 601 ALDIIEKMPIQPDVRC 616
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
T LV Y G +DA VF ++PE + W M+ + E V + +++ GF
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR 139
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
+ F + A ++ L GK+ H C + + D V L+ YAKCG ++ + +
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIH-CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKV 198
Query: 302 FNKLLKRNIVSCNAVVCGYAQN 323
FN + RN+V +++ GY +N
Sbjct: 199 FNDITLRNVVCWTSMIAGYVKN 220
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 120/236 (50%), Gaps = 31/236 (13%)
Query: 87 FAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN 146
FA+ ++ +M+A +RP++ + S +L IGR +H + K G ++
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 147 VFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPE 206
VFVGS+L+D+Y K CG + R ++F EMP+
Sbjct: 151 VFVGSSLVDMYAK--------------------------CGEIVYAR-----KMFDEMPQ 179
Query: 207 RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRF 266
RNVV+W+ M+ G +Q G NEEA+ F + L E + +F SVI+ A L +G++
Sbjct: 180 RNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQI 239
Query: 267 HACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
H +IK FVG+SL+S Y+KCG E + +FN++ +N+ NA++ YAQ
Sbjct: 240 HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQ 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN 177
+L SS R+ + G QLH K GL+ V + L++ Y K ++++AF D+ +
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 178 VVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
++++++ + + +E+P W ++ F M+
Sbjct: 81 STTWSSIISCFAQ-----------NELP------WMSL--------------EFLKKMMA 109
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMED 297
P + PS + A ++ +G+ H ++K DVFVG+SL+ YAKCG +
Sbjct: 110 GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY 169
Query: 298 SLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFTSW 331
+ MF+++ +RN+V+ + ++ GYAQ G W
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 37/205 (18%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH---S 121
A MFDE+ + + ++ G+A+ +E+A+ LF L + N+++F +V+ +
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCAN 229
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
ST+L +GRQ+H + K S+ FVGS+L+ LY K
Sbjct: 230 STLLE---LGRQIHGLSIKSSFDSSSFVGSSLVSLYSK---------------------- 264
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
CG E A QVF+E+P +N+ WNAM+ +Q H ++ + F M G
Sbjct: 265 ----CGVP-----EGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315
Query: 242 PTESTFPSVITAAAKIAALGMGKRF 266
P TF +V+ A + + G+ +
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGRYY 340
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 134/269 (49%), Gaps = 32/269 (11%)
Query: 58 DPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
D + A +FDE++ +I GF + +A+ +SRM+ + ++ + FT+
Sbjct: 76 DSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPF 135
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN 177
V+ S + ++ G+++HA K+G S+V+V ++L+ LY+KL +A+K F + +
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 178 VVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
+VS+ +++ GYL G +L +F E ML+
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKE-------------------------------MLK 224
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC-LGKLDVFVGNSLISFYAKCGSME 296
GF P + S + A + + + MGK H A++ + DV V S++ Y+K G +
Sbjct: 225 CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVS 284
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+ +FN +++RNIV+ N ++ YA+NGR
Sbjct: 285 YAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 141/313 (45%), Gaps = 17/313 (5%)
Query: 36 YHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHED 95
Y +L + ++ K+++ G P F + + + I C +
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL- 154
+ + + +L + E ++ + + + RN+V + C + G ++ F+ +
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 155 -------DLYVKLSTIEEAQKAFGDTQH---------PNVVSYTALVCGYLKRGRFEDAL 198
D+ ++ + + G T H P++V TAL+ Y + G+ + A
Sbjct: 326 EQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAE 385
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
+F M E+NV+SWN+++ Q G N A+ F ++ +P +T S++ A A+
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESL 445
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
+L G+ HA +K + + NSL+ YA CG +ED+ FN +L +++VS N+++
Sbjct: 446 SLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIM 505
Query: 319 GYAQNGRGGFTSW 331
YA +G G + W
Sbjct: 506 AYAVHGFGRISVW 518
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Query: 173 TQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFF 232
T+ N + T + G+ EDALQ+F EM + + WN M+ G + G EAV F+
Sbjct: 59 TKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFY 118
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKC 292
M+ G T+P VI + A I++L GK+ HA IK DV+V NSLIS Y K
Sbjct: 119 SRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKL 178
Query: 293 GSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFTS 330
G D+ +F ++ +R+IVS N+++ GY G GF+S
Sbjct: 179 GCAWDAEKVFEEMPERDIVSWNSMISGYLALG-DGFSS 215
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD +++ S +II + + + A+ LF + S + P+ T ++L + +
Sbjct: 387 IFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLS 446
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ GR++HA K SN + ++L+ +Y +E+A+K F +VVS+ +++
Sbjct: 447 LSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 506
Query: 188 YLKRGRFEDALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIP 242
Y G ++ +F EM N ++ +++ CS +G +E +F M RE G P
Sbjct: 507 YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDP 566
Query: 243 TESTFPSVITAAAKIAALGMGKRF 266
+ ++ + KRF
Sbjct: 567 GIEHYGCMLDLIGRTGNFSAAKRF 590
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 31/246 (12%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I G++++ +A+ F ML K++PNE+T+ +VL S L+++ G+ +H K
Sbjct: 236 TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G S + ++LL +Y++ S ++ D+L+V
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVD-------------------------------DSLRV 324
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F + N VSW +++ G Q G E A+ F M+R+ P T S + + +A
Sbjct: 325 FKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMF 384
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
G++ H K D + G+ LI Y KCG + + L+F+ L + +++S N ++ Y
Sbjct: 385 EEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSY 444
Query: 321 AQNGRG 326
AQNG G
Sbjct: 445 AQNGFG 450
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 135/309 (43%), Gaps = 32/309 (10%)
Query: 18 ITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTG 77
+ Q + R I+ H L + + ++ L A +FD +S+
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHI 130
Query: 78 ESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHAC 137
+ ++I K ++A+ ++ M+ + + P+E+T +V + + L ++ H
Sbjct: 131 VTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGL 190
Query: 138 ATKIGL-ASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFED 196
A +GL SNVFVGSAL+D+YVK EA+ + +VV TAL+ GY
Sbjct: 191 AVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY-------- 242
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
SQ G + EAV F ML E P E T+ SV+ +
Sbjct: 243 -----------------------SQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
+ +G GK H +K + + SL++ Y +C ++DSL +F + N VS ++
Sbjct: 280 LKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSL 339
Query: 317 VCGYAQNGR 325
+ G QNGR
Sbjct: 340 ISGLVQNGR 348
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 4/186 (2%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T++I G + E A+ F +M+ I+PN FT + L + L GRQ+H
Sbjct: 335 SWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIV 394
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
TK G + + GS L+DLY K + A+ F +V+S ++ Y + G +AL
Sbjct: 395 TKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREAL 454
Query: 199 QVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
+F M + N V+ +++ C+ + EE F ++ + T + ++
Sbjct: 455 DLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLL 514
Query: 255 AKIAAL 260
+ L
Sbjct: 515 GRAGRL 520
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 96/171 (56%)
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
+ +Y KL A +G + N +S L+ GY++ G +A +VF EMP+R + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC 273
AM+ G Q NEE ++ F +M GF P E T SV + +A + ++ +G++ H IK
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 274 LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+LD+ V +SL Y + G ++D ++ + RN+V+ N ++ G AQNG
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG 171
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 31/262 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDE+ D + +I G + +E+ + LF M P+E+T G+V S
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAG 103
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
LR+V IG+Q+H K GL ++ V S+L +Y
Sbjct: 104 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY--------------------------- 136
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
++ G+ +D V MP RN+V+WN ++ G +Q G E + + M G P +
Sbjct: 137 ----MRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 192
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
TF +V+++ + +A G G++ HA AIK V V +SLIS Y+KCG + D+ F++
Sbjct: 193 ITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE 252
Query: 305 LLKRNIVSCNAVVCGYAQNGRG 326
+ V ++++ Y +G+G
Sbjct: 253 REDEDEVMWSSMISAYGFHGQG 274
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 114/215 (53%), Gaps = 13/215 (6%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I G A+ C E ++L+ M S RPN+ TF TVL S + L G+Q+HA A K
Sbjct: 161 NTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK 220
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
IG +S V V S+L+ +Y K + +A KAF + + + V +++++ Y G+ ++A+++
Sbjct: 221 IGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIEL 280
Query: 201 FHEMPER-----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE--GFIPTESTFPSVITA 253
F+ M E+ N V++ ++ CS +G ++ + F DM+ E GF P + V+
Sbjct: 281 FNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF-DMMVEKYGFKPGLKHYTCVVDL 339
Query: 254 AAKIAALGMGKRFHACAIKCLG-KLDVFVGNSLIS 287
+ L + I+ + K D+ + +L+S
Sbjct: 340 LGRAGCLDQAE----AIIRSMPIKTDIVIWKTLLS 370
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 126/262 (48%), Gaps = 36/262 (13%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSSTVLR 126
+FD + +I +++ +++ + F M+++ + P+ FT+ V+ + +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+V IG +H K GL +VFVG+AL+ Y
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGT--------------------------- 234
Query: 187 GYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE----GFIP 242
G DALQ+F MPERN+VSWN+M+ S G +EE+ +M+ E F+P
Sbjct: 235 ----HGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP 290
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
+T +V+ A+ +G+GK H A+K ++ + N+L+ Y+KCG + ++ ++F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 303 NKLLKRNIVSCNAVVCGYAQNG 324
+N+VS N +V G++ G
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEG 372
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 81/148 (54%)
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
N + A V Y K G A +VFH + + V SWNA++GG +Q+ +++ + M
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
G +P T S+++A +K+ +L +GK H I+ + D+FV S++S Y CG +
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+F+ + +++VS N V+ GY QNG
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNG 576
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 61 TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
+ A +F I T S +I G A+ + ++ +M S + P+ FT ++L
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
+ + L+++ +G+++H + L ++FV ++L LY+ + Q
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA------------ 552
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+F M ++++VSWN ++ G Q G + A+ F M+ G
Sbjct: 553 -------------------LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
+ V A + + +L +G+ HA A+K L + D F+ SLI YAK GS+ S
Sbjct: 594 QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG 324
+FN L +++ S NA++ GY +G
Sbjct: 654 VFNGLKEKSTASWNAMIMGYGIHG 677
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GF 240
T ++ Y G +D+ VF + +N+ WNA++ S+ +E + FI+M+
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
+P T+P VI A A ++ +G+G H +K DVFVGN+L+SFY G + D+L
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG 324
+F+ + +RN+VS N+++ ++ NG
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNG 267
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 33/263 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK----IRPNEFTFGTVLH 120
A +FD + + S ++I F+ E++ L M+ P+ T TVL
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
R + +G+ +H A K+ L + + +AL+D+Y K I AQ F + NVVS
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+ +V G+ G V +M + GG +N E F
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQM----------LAGGEDVKADEVTILNAVPVCFHESF 410
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
+P+ K H ++K + V N+ ++ YAKCGS+ +
Sbjct: 411 LPSL-------------------KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 451
Query: 301 MFNKLLKRNIVSCNAVVCGYAQN 323
+F+ + + + S NA++ G+AQ+
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQS 474
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD + D + S T+I G+ + + A+ +F +M+ I+ + V + ++L +
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ +GR+ HA A K L + F+ +L+D+Y K +I ++ K F + + S+ A++ G
Sbjct: 613 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 188 YLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIP 242
Y G ++A+++F EM + +++ ++ C+ +G E + + M G P
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLIS 287
+ VI + L K A + + DV + SL+S
Sbjct: 733 NLKHYACVIDMLGRAGQL--DKALRVVAEEMSEEADVGIWKSLLS 775
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 105/181 (58%)
Query: 146 NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
NV S +L +YV +E+A+K F D N ++ ++ GY + G +A +F+ +
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 206 ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
R++V WN ++ G +Q G++++A++ F +M EG+ P T S+++A A+ L +G+
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
H+ +L+ FV N+LI YAKCG +E++ +F + R++ CN+++ A +G+
Sbjct: 296 VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGK 355
Query: 326 G 326
G
Sbjct: 356 G 356
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 7/202 (3%)
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
V+ VV+G+ LH+ + K G+ S+V VGS+L+ +Y K + A+K F + NV ++ A
Sbjct: 58 VVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNA 117
Query: 184 LVCGYLKRGRFEDALQVFHEMPE-RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
++ GY+ G A +F E+ RN V+W M+ G + E+A F M E +
Sbjct: 118 MIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE--LK 175
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
+ ++ + ++F + + + + FV + ++S Y + G + ++ +F
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKF----FEDIPEKNAFVWSLMMSGYFRIGDVHEARAIF 231
Query: 303 NKLLKRNIVSCNAVVCGYAQNG 324
++ R++V N ++ GYAQNG
Sbjct: 232 YRVFARDLVIWNTLIAGYAQNG 253
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I G+A+ +DAI F M P+ T ++L + + +GR++H+
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH 302
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G+ N FV +AL+D+Y K +E A F +V +++ G+ ++AL++
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEM 362
Query: 201 FHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
F M ++ +++ A++ C G E + F +M + P F +I
Sbjct: 363 FSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLI 417
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 248 PSVITAAA-KIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
P ++ A A + + +GK H+ +IK DV VG+SLIS Y KCG + + +F+++
Sbjct: 49 PLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMP 108
Query: 307 KRNIVSCNAVVCGYAQNG 324
+RN+ + NA++ GY NG
Sbjct: 109 ERNVATWNAMIGGYMSNG 126
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 158/349 (45%), Gaps = 49/349 (14%)
Query: 24 SCRYI-----TKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGE 78
+CRY+ + HT + K EN V +++ A ++F E+
Sbjct: 167 ACRYLGRFGLCRAFHTQVIQIGLK-ENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRM 225
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL--HSS-------------- 122
S +I GF++ + E A+ +F M + +P+E T+ +VL HS
Sbjct: 226 SWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Query: 123 -------------------TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTI 163
L + I ++H K G + +AL+ +Y K +
Sbjct: 286 RMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKV 345
Query: 164 EEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERN--------VVSWNAM 215
++A+ F ++ + S+ +L+ ++ G+ ++AL +F E+ E N VV+W ++
Sbjct: 346 KDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSV 405
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG 275
+ GC+ G ++++ +F M + T +++ A++ AL +G+ H I+
Sbjct: 406 IKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSM 465
Query: 276 KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
++ V N+L++ YAKCG + + L+F + ++++S N+++ GY +G
Sbjct: 466 SENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHG 514
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 107/270 (39%), Gaps = 70/270 (25%)
Query: 93 HEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSA 152
+E+A+ L+ M + + + +L + L + R H +IGL N+ V +
Sbjct: 139 YENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNE 198
Query: 153 LLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSW 212
LL LY K GR DA +F EMP RN +SW
Sbjct: 199 LLTLYPK-------------------------------AGRMGDAYNLFVEMPVRNRMSW 227
Query: 213 NAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT-------------------- 252
N M+ G SQ E AV F M RE F P E T+ SV++
Sbjct: 228 NVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRM 287
Query: 253 ---------------AAAKIAALGMGKRFHACAIKCLGKLDVFVG--NSLISFYAKCGSM 295
A++ AL + ++ H IK G + ++ N+LI Y K G +
Sbjct: 288 SGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIK--GGFEEYLPSRNALIHVYGKQGKV 345
Query: 296 EDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+D+ +F ++ + I S N+++ + G+
Sbjct: 346 KDAEHLFRQIRNKGIESWNSLITSFVDAGK 375
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 5/185 (2%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T++I G + +D++ F +M SK+ N T +L L + +GR++H +
Sbjct: 403 TSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIR 462
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
++ N+ V +AL+++Y K + E F + +++S+ +++ GY G E AL +
Sbjct: 463 TSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSM 522
Query: 201 FHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDM-LREGFIPTESTFPSVITAAA 255
F M ++ A++ CS G E+ F M R G P + + ++
Sbjct: 523 FDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLG 582
Query: 256 KIAAL 260
++ L
Sbjct: 583 RVGFL 587
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 184 LVCGYLKRGRFEDALQVFHEMPE---RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
L+ Y + G DA VF + ++ WN+++ G E A+ + M + G
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
P ++ A + G+ + FH I+ K ++ V N L++ Y K G M D+
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 301 MFNKLLKRNIVSCNAVVCGYAQ 322
+F ++ RN +S N ++ G++Q
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQ 236
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 135/266 (50%), Gaps = 36/266 (13%)
Query: 63 QVACHMFDEIS--DLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
+VA +FD +S D + + ++I G+A+ +EDA+ L+ +M ++P+ FTF VL
Sbjct: 144 EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
+ + +V IG +H K G +V+V +AL+ +Y K
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK--------------------- 242
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
CG + + R VF +P ++ VSWN+M+ G G EA++ F M++ G
Sbjct: 243 -----CGDIVKAR-----NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGI 292
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
P + SV+ A++ + G++ H I+ + ++ V N+LI Y+K G + +
Sbjct: 293 EPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACF 349
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNGRG 326
+F+++L+R+ VS NA++ +++N G
Sbjct: 350 IFDQMLERDTVSWNAIISAHSKNSNG 375
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ 174
F ++L + LR + G ++H L +N+ + S L+ LY
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYAS--------------- 139
Query: 175 HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERN--VVSWNAMVGGCSQTGHNEEAVNFF 232
CGY E A +VF M +R+ +WN+++ G ++ G E+A+ +
Sbjct: 140 -----------CGYA-----EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY 183
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKC 292
M +G P TFP V+ A I ++ +G+ H +K DV+V N+L+ YAKC
Sbjct: 184 FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKC 243
Query: 293 GSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
G + + +F+ + ++ VS N+++ GY +G
Sbjct: 244 GDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 70/317 (22%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T++I G A+ A+ F M + PN+FTF + LR V G+Q+HA A
Sbjct: 75 SWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALA 134
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ------------------------ 174
K G +VFVG + D+Y K ++A+K F +
Sbjct: 135 VKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAI 194
Query: 175 -----------HPNVVSYTALV--C-------------GYLKRGRFEDALQV-------- 200
HPN +++ A + C G + R F+ + V
Sbjct: 195 EAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY 254
Query: 201 ------------FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFP 248
F EM +N VSW ++V Q +E+A ++ ++ ++
Sbjct: 255 GKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMIS 314
Query: 249 SVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR 308
SV++A A +A L +G+ HA A+K + +FVG++L+ Y KCG +EDS F+++ ++
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 309 NIVSCNAVVCGYAQNGR 325
N+V+ N+++ GYA G+
Sbjct: 375 NLVTRNSLIGGYAHQGQ 391
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 168 KAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEE 227
K P + +Y L+ Y K E A V P RNVVSW +++ G +Q GH
Sbjct: 34 KTLDSPPPPFLANY--LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFST 91
Query: 228 AVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLIS 287
A+ F +M REG +P + TFP A A + GK+ HA A+KC LDVFVG S
Sbjct: 92 ALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFD 151
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
Y K +D+ +F+++ +RN+ + NA + +GR
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F E+ S +++ + + H E A L+ R + ++F +VL + +
Sbjct: 266 IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAG 325
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ +GR +HA A K + +FVGSAL+D+Y K IE++++AF + N+V+ +L+ G
Sbjct: 326 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 385
Query: 188 YLKRGRFEDALQVFHEM------PERNVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
Y +G+ + AL +F EM P N +++ +++ CS+ G E + F M
Sbjct: 386 YAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 32 VHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESA-------TTII 84
VH H S ++ + +V K + TF A ++ +E + S +I
Sbjct: 65 VHAHCISSGVEYHSVLVPKLV--------TFYSAFNLHNEAQSIIENSDILHPLPWNVLI 116
Query: 85 CGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA 144
+AK E+ I + RM++ IRP+ FT+ +VL + +V GR +H
Sbjct: 117 ASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYK 176
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
S+++V +AL+ +Y + + A++ F + VS+ A++ Y G + +A ++F +M
Sbjct: 177 SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
Query: 205 ----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK---- 256
E +V++WN + GGC QTG+ A+ G I FP+ + A
Sbjct: 237 WFSGVEVSVITWNIISGGCLQTGNYVGAL---------GLISRMRNFPTSLDPVAMIIGL 287
Query: 257 -----IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
I A+ +GK H AI V N+LI+ Y+KC + +L++F + + ++
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLC 347
Query: 312 SCNAVVCGYAQ 322
+ N+++ GYAQ
Sbjct: 348 TWNSIISGYAQ 358
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 23/278 (8%)
Query: 64 VACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSST 123
+A +FD + + S +I +A +A LF +M S + + T+ +
Sbjct: 197 IARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCL 256
Query: 124 VLRNVV-----IGR------QLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGD 172
N V I R L A IGL + +G+ L + I + +
Sbjct: 257 QTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDN 316
Query: 173 TQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFF 232
++ L+ Y K AL VF + E ++ +WN+++ G +Q +EEA +
Sbjct: 317 VRN-------TLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLL 369
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI---KCLGKLDVFVGNSLISFY 289
+ML GF P T S++ A+IA L GK FH C I KC K + NSL+ Y
Sbjct: 370 REMLVAGFQPNSITLASILPLCARIANLQHGKEFH-CYILRRKCF-KDYTMLWNSLVDVY 427
Query: 290 AKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGG 327
AK G + + + + + KR+ V+ +++ GY G GG
Sbjct: 428 AKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGG 465
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 45/243 (18%)
Query: 91 HCHEDAIHLFS--RMLASKIRPNEFTFGTVLHSSTVL-------RNVVIGRQLHACATKI 141
H H DA FS R+ +S ++ VLHS+ L R + G Q+HA
Sbjct: 18 HLH-DAFKTFSLLRLQSSSAVSDDL----VLHSAASLLSACVDVRAFLAGVQVHAHCISS 72
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF 201
G+ + + L+ Y + EAQ ++ +
Sbjct: 73 GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSD-------------------------IL 107
Query: 202 HEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALG 261
H +P WN ++ ++ EE + + M+ +G P T+PSV+ A + +
Sbjct: 108 HPLP------WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVA 161
Query: 262 MGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYA 321
G+ H K ++V N+LIS Y + +M + +F+++ +R+ VS NAV+ YA
Sbjct: 162 FGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA 221
Query: 322 QNG 324
G
Sbjct: 222 SEG 224
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+II G+A+ + E+A HL ML + +PN T ++L + N+ G++ H +
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 141 IG-LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQ 199
+ ++L+D+Y K I A++ + V+YT+L+ GY +G AL
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALA 469
Query: 200 VFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITAA 254
+F EM + V+ A++ CS + E F+ M E G P F ++
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLY 529
Query: 255 AKIAALGMGK 264
+ L K
Sbjct: 530 GRAGFLAKAK 539
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 146/299 (48%), Gaps = 6/299 (2%)
Query: 26 RYITKTVHTHYHSLATKHENT-VVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTII 84
R++ T+H + +T VV + YG + A +FDE+ + I+
Sbjct: 3 RFLGLTIHGGLIKRGLDNSDTRVVSASMGFYG-RCVSLGFANKLFDEMPKRDDLAWNEIV 61
Query: 85 CGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA 144
+ E A+ LF M S + + T +L + GRQ+H ++GL
Sbjct: 62 MVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
SNV + ++L+ +Y + +E ++K F + N+ S+ +++ Y K G +DA+ + EM
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 205 P----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
+ ++V+WN+++ G + G +++A+ M G P+ S+ S++ A A+ L
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
+GK H ++ DV+V +LI Y K G + + ++F+ + +NIV+ N++V G
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG 300
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+++ G+A + +DAI + RM + ++P+ + ++L + ++ +G+ +H +
Sbjct: 194 NSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR 253
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFG--DTQH----------------------- 175
L +V+V + L+D+Y+K + A+ F D ++
Sbjct: 254 NQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEAL 313
Query: 176 ----------PNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQ 221
P+ +++ +L GY G+ E AL V +M E+ NVVSW A+ GCS+
Sbjct: 314 MIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSK 373
Query: 222 TGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFV 281
G+ A+ FI M EG P +T +++ ++ L GK H ++ D +V
Sbjct: 374 NGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYV 433
Query: 282 GNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+L+ Y K G ++ ++ +F + +++ S N ++ GYA GRG
Sbjct: 434 ATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 478
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T I G +K +A+ +F +M + PN T T+L L + G+++H
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
+ L + +V +AL+D+Y K ++ A + F ++ ++ S+ ++ GY GR E+ +
Sbjct: 423 LRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 199 QVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE--GFIPT 243
F M E + +++ +++ C +G +E +F D++R G IPT
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYF-DLMRSRYGIIPT 532
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 70/128 (54%)
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A ++F EMP+R+ ++WN +V ++G+ E+AV F +M G +ST ++ +
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
G++ H ++ + +V + NSLI Y++ G +E S +FN + RN+ S N++
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 317 VCGYAQNG 324
+ Y + G
Sbjct: 162 LSSYTKLG 169
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 130 IGRQLHACATKIGLA-SNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
+G +H K GL S+ V SA + Y + ++ A K F + + +++ +V
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 189 LKRGRFEDALQVFHEMPERNVVSWNA----MVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
L+ G +E A+++F EM ++++ ++ CS E +LR G
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 245 STFPSVITAAAKIAALGMGKR-FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
S S+I ++ L + ++ F++ + L NS++S Y K G ++D++ + +
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW-----NSILSSYTKLGYVDDAIGLLD 179
Query: 304 KL----LKRNIVSCNAVVCGYAQNG 324
++ LK +IV+ N+++ GYA G
Sbjct: 180 EMEICGLKPDIVTWNSLLSGYASKG 204
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 31/267 (11%)
Query: 60 TTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL 119
++ A H+F+ +S+ ++ G+++ + LF +L I P+ +TF ++L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
+ V + + GRQLH + K+GL NV+V L+++Y + ++ A+ F P VV
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG 239
Y A++ GY +R R +AL +F EM + +
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLK----------------------------- 227
Query: 240 FIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSL 299
P E T SV+++ A + +L +GK H A K V V +LI +AKCGS++D++
Sbjct: 228 --PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 300 LMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+F K+ ++ + +A++ YA +G+
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKA 312
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 110/239 (46%), Gaps = 32/239 (13%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD I + +I G+A+R+ +A+ LF M ++PNE T +VL S +L +
Sbjct: 186 VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGS 245
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ +G+ +H A K V V +AL+D++ K CG
Sbjct: 246 LDLGKWIHKYAKKHSFCKYVKVNTALIDMFAK--------------------------CG 279
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
L +DA+ +F +M ++ +W+AM+ + G E+++ F M E P E TF
Sbjct: 280 SL-----DDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITF 334
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKL-DVFVGNSLISFYAKCGSMEDSLLMFNKL 305
++ A + + G+++ + + G + + S++ ++ G++ED+ +KL
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 168 KAFGDTQHPNVVSYTALVCGYLKRGRFEDAL----QVFHEMPERNVVSWNAMVGGCSQTG 223
+A+ H VS+ A + + E ++ +F M E ++V +N+M G S+
Sbjct: 49 QAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFT 108
Query: 224 HNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN 283
+ E + F+++L +G +P TFPS++ A A AL G++ H ++K +V+V
Sbjct: 109 NPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCP 168
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+LI+ Y +C ++ + +F+++++ +V NA++ GYA+ R
Sbjct: 169 TLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Query: 146 NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
++ + + ++ Y+++ + EA+ F +V+S+ ++ GY G E +VF +MP
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 206 ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG-FIPTESTFPSVITAAAKIAALGMGK 264
ERNV SWN ++ G +Q G E + F M+ EG +P ++T V++A AK+ A GK
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 265 RFHACAIKCLG--KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
H + LG K+DV V N+LI Y KCG++E ++ +F + +R+++S N ++ G A
Sbjct: 209 WVHKYG-ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAA 267
Query: 323 NGRG 326
+G G
Sbjct: 268 HGHG 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 39/166 (23%)
Query: 160 LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGC 219
+ I A K F + NVV +T+++ GYL A + F PER++V WN M+ G
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGY 100
Query: 220 SQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDV 279
+ G+ EA + F M C DV
Sbjct: 101 IEMGNMLEARSLFDQM--------------------------------PCR-------DV 121
Query: 280 FVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
N+++ YA G ME +F+ + +RN+ S N ++ GYAQNGR
Sbjct: 122 MSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGR 167
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 65 ACH-MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML-ASKIRPNEFTFGTVLHSS 122
AC +FD++ + S +I G+A+ + + F RM+ + PN+ T VL +
Sbjct: 139 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 123 TVLRNVVIGRQLHACATKIGLAS-NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L G+ +H +G +V V +AL+D+Y K
Sbjct: 199 AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGK---------------------- 236
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
CG + E A++VF + R+++SWN M+ G + GH EA+N F +M G
Sbjct: 237 ----CGAI-----EIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGIS 287
Query: 242 PTESTFPSVITA 253
P + TF V+ A
Sbjct: 288 PDKVTFVGVLCA 299
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 144/296 (48%), Gaps = 33/296 (11%)
Query: 30 KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAK 89
+ +H H + K++ T++ I+ + + A +FD + + S T++I G+++
Sbjct: 87 RKIHDHILNSNCKYD-TILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQ 145
Query: 90 RHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFV 149
+AI L+ +ML + P++F FG+++ + +V +G+QLHA K+ +S++
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205
Query: 150 GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
+AL+ +YV+ + + DA +VF+ +P +++
Sbjct: 206 QNALIAMYVRFN-------------------------------QMSDASRVFYGIPMKDL 234
Query: 210 VSWNAMVGGCSQTGHNEEAVNFFIDMLREG-FIPTESTFPSVITAAAKIAALGMGKRFHA 268
+SW++++ G SQ G EA++ +ML G F P E F S + A + + G + H
Sbjct: 235 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHG 294
Query: 269 CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
IK + G SL YA+CG + + +F+++ + + S N ++ G A NG
Sbjct: 295 LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 5/177 (2%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
+ + LF ML S+ P+ T G +L + ++ +G Q+H + K GLA F+ + L+
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP----ERNVV 210
D+Y K ++ +A++ F + +VVS++ L+ GY + G E+AL +F EM E N V
Sbjct: 516 DMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 211 SWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITAAAKIAALGMGKRF 266
++ ++ CS G EE + + M E G PT+ V+ A+ L +RF
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERF 632
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKI-RPNEFTFGTVLHSSTVLRNVVIGRQLHAC 137
S ++II GF++ +A+ ML+ + PNE+ FG+ L + + L G Q+H
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDA 197
K LA N G +L D+Y + CG+L R
Sbjct: 296 CIKSELAGNAIAGCSLCDMYAR--------------------------CGFLNSAR---- 325
Query: 198 LQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKI 257
+VF ++ + SWN ++ G + G+ +EAV+ F M GFIP + S++ A K
Sbjct: 326 -RVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKP 384
Query: 258 AALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSM 295
AL G + H+ IK D+ V NSL++ Y C +
Sbjct: 385 MALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDL 422
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD+I S II G A ++A+ +FS+M +S P+ + ++L + T
Sbjct: 324 ARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTK 383
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ G Q+H+ K G +++ V ++LL +Y S L
Sbjct: 384 PMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSD---------------------L 422
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
C + FED + VSWN ++ C Q E + F ML P
Sbjct: 423 YCCF---NLFEDFRN------NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T +++ +I++L +G + H ++K + F+ N LI YAKCGS+ + +F+
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 305 LLKRNIVSCNAVVCGYAQNGRG 326
+ R++VS + ++ GYAQ+G G
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFG 555
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 246 TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
T+ S+I A + +L G++ H + K D + N ++S Y KCGS+ D+ +F+ +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 306 LKRNIVSCNAVVCGYAQNGRGG 327
+RN+VS +V+ GY+QNG+G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGA 150
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 40/244 (16%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKI-RPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
+I G++ + + + + RM+ + + RP+E+TF V+ + V +G +H +I
Sbjct: 80 LIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRI 139
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF 201
G +V VG++ +D Y K + A+K FG+ N VS+TALV Y+K G E+A +F
Sbjct: 140 GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF 199
Query: 202 HEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALG 261
MPERN+ SWNA+V G ++G A F +M
Sbjct: 200 DLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEM-------------------------- 233
Query: 262 MGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYA 321
K D+ S+I YAK G M + +F + ++ + +A++ GYA
Sbjct: 234 -------------PKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 322 QNGR 325
QNG+
Sbjct: 281 QNGQ 284
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 200 VFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIA 258
VF +P WN ++ G S E V+ + M+R G P E TFP V+ +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
+ +G H ++ DV VG S + FY KC + + +F ++ +RN VS A+V
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 319 GYAQNGR 325
Y ++G
Sbjct: 185 AYVKSGE 191
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 44/237 (18%)
Query: 40 ATKHENTVVQKDIIPY---------GLDPTTFQVACHMFDEISDLTGESATTIICGFAKR 90
A K + + ++DII Y G D + A +F+E + + + +I G+A+
Sbjct: 226 AKKLFDEMPKRDIISYTSMIDGYAKGGDMVS---ARDLFEEARGVDVRAWSALILGYAQN 282
Query: 91 HCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHA-CATKIGLASNVFV 149
+A +FS M A ++P+EF ++ + + + + ++ + ++ S+ +V
Sbjct: 283 GQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYV 342
Query: 150 GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
AL+D+ K CG++ R A ++F EMP+R++
Sbjct: 343 VPALIDMNAK--------------------------CGHMDR-----AAKLFEEMPQRDL 371
Query: 210 VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRF 266
VS+ +M+ G + G EA+ F M+ EG +P E F ++ + + G R+
Sbjct: 372 VSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRY 428
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 145/293 (49%), Gaps = 5/293 (1%)
Query: 35 HYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHE 94
H H L T + T KD++ L A +FD + +I + H
Sbjct: 8 HAHCLRTGVDET---KDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPH 64
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
++I L++ + +RP+ TF + +S + R LH+ + G S+ F + L+
Sbjct: 65 ESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLI 124
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNA 214
Y KL + A++ F + +V + A++ GY +RG + A+++F MP +NV SW
Sbjct: 125 TAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTT 184
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIAALGMGKRFHACAIKC 273
++ G SQ G+ EA+ F+ M ++ + P T SV+ A A + L +G+R A +
Sbjct: 185 VISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAREN 244
Query: 274 LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL-LKRNIVSCNAVVCGYAQNGR 325
+++V N+ I Y+KCG ++ + +F +L +RN+ S N+++ A +G+
Sbjct: 245 GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 31/192 (16%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK-IRPNEFTFGTVLHS 121
+ A +FD + S TT+I GF++ + +A+ +F M K ++PN T +VL +
Sbjct: 165 KAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPA 224
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L + IGR+L A + G N++V +A +++Y K I+ A++ F + +
Sbjct: 225 CANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGN------ 278
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
+RN+ SWN+M+G + G ++EA+ F MLREG
Sbjct: 279 ------------------------QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEK 314
Query: 242 PTESTFPSVITA 253
P TF ++ A
Sbjct: 315 PDAVTFVGLLLA 326
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 133/249 (53%), Gaps = 5/249 (2%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
T+I + ++ ++ LF+ MLAS ++PN TF +++ ++ +V G LH A K
Sbjct: 56 TLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKR 115
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF 201
G + FV ++ + Y ++ +E ++K F D +P VV+ +L+ + G + A + F
Sbjct: 116 GFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYF 175
Query: 202 HEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML---REGFIPTESTFPSVITAAAKIA 258
MP +VVSW ++ G S+ G + +A+ F +M+ R P E+TF SV+++ A
Sbjct: 176 QRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFD 235
Query: 259 ALG--MGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
G +GK+ H + L +G +L+ Y K G +E +L +F+++ + + + NA+
Sbjct: 236 QGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAI 295
Query: 317 VCGYAQNGR 325
+ A NGR
Sbjct: 296 ISALASNGR 304
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASK---IRPNEFTFGTVLHSSTVLRN--VVIGRQ 133
S TT+I GF+K+ H A+ +F M+ ++ I PNE TF +VL S + +G+Q
Sbjct: 185 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQ 244
Query: 134 LHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGR 193
+H + +G+ALLD+Y K +E A F + V ++ A++ GR
Sbjct: 245 IHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGR 304
Query: 194 FEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFP 248
+ AL++F M N ++ A++ C+++ + + F + E IPT +
Sbjct: 305 PKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYG 364
Query: 249 SVI 251
V+
Sbjct: 365 CVV 367
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI 271
+N ++ TG + ++ F ML P TFPS+I AA ++ G H A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
K D FV S + FY + G +E S MF+ +L +V+CN+++ +NG
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 134/259 (51%), Gaps = 33/259 (12%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F+ +S+ S T++I + + A+ F +M S++ PNE TF ++ + L
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+V G QLH +GL ++ V ++++ +Y + N+VS + L
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMY---------------STCGNLVSASVL--- 367
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
F M R+++SW+ ++GG Q G EE +F M + G PT+
Sbjct: 368 -------------FQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFAL 414
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLG-KLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
S+++ + +A + G++ HA A+ C G + + V +SLI+ Y+KCGS++++ ++F +
Sbjct: 415 ASLLSVSGNMAVIEGGRQVHALAL-CFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 307 KRNIVSCNAVVCGYAQNGR 325
+ +IVS A++ GYA++G+
Sbjct: 474 RDDIVSLTAMINGYAEHGK 492
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 37/272 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
+C +F E+ + T II G +++ + FS M S+ + +TF L +
Sbjct: 162 SCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAG 221
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
LR V G+ +H G + + V ++L +Y +
Sbjct: 222 LRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTEC------------------------ 257
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
G +D L +F M ER+VVSW +++ + G +AV FI M P E
Sbjct: 258 -------GEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNE 310
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVF-VGNSLISFYAKCGSMEDSLLMFN 303
TF S+ +A A ++ L G++ H C + LG D V NS++ Y+ CG++ + ++F
Sbjct: 311 QTFASMFSACASLSRLVWGEQLH-CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ 369
Query: 304 KLLKRNIVSCNAVVCGYAQNGRG--GFT--SW 331
+ R+I+S + ++ GY Q G G GF SW
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW 401
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 43 HENTVVQKDIIPYGLDPTT----------FQVACHMFDEISDLTGESATTIICGFAKRHC 92
EN V + + DP + + A +FD++ S T+II + +
Sbjct: 27 EENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANN 86
Query: 93 HEDAIHLFS--RMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVG 150
++A+ LFS R++ + P+ VL + N+ G LHA A K L S+V+VG
Sbjct: 87 SDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVG 146
Query: 151 SALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVV 210
S+LLD+Y ++ I+++ + F + N V++TA++ G + GR+++ L F EM
Sbjct: 147 SSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMS----- 201
Query: 211 SWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACA 270
+EE + + TF + A A + + GK H
Sbjct: 202 -------------RSEELSDTY-------------TFAIALKACAGLRQVKYGKAIHTHV 235
Query: 271 IKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
I + V NSL + Y +CG M+D L +F + +R++VS +++ Y + G+
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 33/189 (17%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +TII G+ + E+ FS M S +P +F ++L S + + GRQ+HA A
Sbjct: 378 SWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALA 437
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
GL N V S+L+++Y K +I+EA FG+T ++VS TA++ GY + G+
Sbjct: 438 LCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGK----- 492
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
++EA++ F L+ GF P TF SV+TA
Sbjct: 493 --------------------------SKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526
Query: 259 ALGMGKRFH 267
L +G FH
Sbjct: 527 QLDLG--FH 533
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 129/270 (47%), Gaps = 8/270 (2%)
Query: 64 VACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLA-SKIRPNEFTFGTVLHSS 122
+A MF+++ + + I G + +F+ M S PN+ TF + +
Sbjct: 182 LAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC 241
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP-NVVSY 181
L N+ GRQLH K VG+AL+D+Y K + A F + + N++S+
Sbjct: 242 ASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISW 301
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
+++ G + G+ E A+++F ++ + +WN+++ G SQ G EA FF ML
Sbjct: 302 NSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS 361
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMED 297
+P+ S+++A + I L GK H IK + D+FV SLI Y KCG
Sbjct: 362 VVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSW 421
Query: 298 SLLMFNKL--LKRNIVSCNAVVCGYAQNGR 325
+ +F++ ++ V N ++ GY ++G
Sbjct: 422 ARRIFDRFEPKPKDPVFWNVMISGYGKHGE 451
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 98/215 (45%), Gaps = 34/215 (15%)
Query: 110 PNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKA 169
PN+FTF +L S L +VV GR LHA K G +VF
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTA------------------- 69
Query: 170 FGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAV 229
TALV Y+K + DAL+V EMPER + S NA V G + G +A
Sbjct: 70 ------------TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAF 117
Query: 230 NFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFY 289
F D G T SV+ I G + H A+K +++V+VG SL+S Y
Sbjct: 118 RMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMY 174
Query: 290 AKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
++CG + MF K+ +++V+ NA + G +NG
Sbjct: 175 SRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 38/264 (14%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A + DE+ + S + G + DA +F S N T +VL
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD 144
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ G QLH A K G V+VG++L+ +Y +
Sbjct: 145 IEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRC------------------------ 177
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE--GFIP 242
G + A ++F ++P ++VV++NA + G + G + F +++R+ P
Sbjct: 178 -------GEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVF-NLMRKFSSEEP 229
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
+ TF + ITA A + L G++ H +K + + VG +LI Y+KC + + ++F
Sbjct: 230 NDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVF 289
Query: 303 NKLLK-RNIVSCNAVVCGYAQNGR 325
+L RN++S N+V+ G NG+
Sbjct: 290 TELKDTRNLISWNSVISGMMINGQ 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 92/196 (46%), Gaps = 35/196 (17%)
Query: 63 QVACHMFDEISD--LTGESAT--TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTV 118
+ A +F+++ L +SAT ++I GF++ +A F RML+ + P+ ++
Sbjct: 315 ETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSL 374
Query: 119 LHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNV 178
L + + + + G+++H K ++FV ++L+D+Y+K A++ F
Sbjct: 375 LSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFD------- 427
Query: 179 VSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
RFE ++ V WN M+ G + G E A+ F ++LRE
Sbjct: 428 --------------RFEPK--------PKDPVFWNVMISGYGKHGECESAIEIF-ELLRE 464
Query: 239 GFI-PTESTFPSVITA 253
+ P+ +TF +V++A
Sbjct: 465 EKVEPSLATFTAVLSA 480
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 33/230 (14%)
Query: 97 IHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV--VIGRQLHACATKIGLASNVFVGSALL 154
I +F +L S + PN FT L ++T N + Q+ TK GL V+V ++LL
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNA 214
+LY LK+G A +F EMPER+ V WNA
Sbjct: 93 NLY-------------------------------LKKGCVTSAQMLFDEMPERDTVVWNA 121
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCL 274
++ G S+ G+ +A FI ML++GF P+ +T +++ + + G+ H A K
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 275 GKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+LD V N+LISFY+KC + + ++F ++ ++ VS N ++ Y+Q+G
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 231
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 37/257 (14%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FDE+ + +ICG+++ DA LF ML P+ T +L
Sbjct: 107 LFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGF 166
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
V GR +H A K GL + V +AL+ Y K + + A+
Sbjct: 167 VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEV------------------- 207
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
+F EM +++ VSWN M+G SQ+G EEA+ F +M + + T
Sbjct: 208 ------------LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTI 255
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
++++A L H +KC D+ V SL+ Y++CG + + ++ +
Sbjct: 256 INLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQ 309
Query: 308 RNIVSCNAVVCGYAQNG 324
+IV ++V YA+ G
Sbjct: 310 DSIVGLTSIVSCYAEKG 326
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 107/245 (43%), Gaps = 32/245 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I+ +A++ + A+ FS+ ++ + +LH ++ IG LH A K
Sbjct: 316 TSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIK 375
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
GL + V + L+ +Y K +E L +
Sbjct: 376 SGLCTKTLVVNGLITMYSKFDDVETV-------------------------------LFL 404
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDM-LREGFIPTESTFPSVITAAAKIAA 259
F ++ E ++SWN+++ GC Q+G A F M L G +P T S++ +++
Sbjct: 405 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
L +GK H ++ + + FV +LI YAKCG+ + +F + + N+++ G
Sbjct: 465 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 524
Query: 320 YAQNG 324
Y+ +G
Sbjct: 525 YSLSG 529
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 45/263 (17%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F E+ D + S T+I +++ E+AI +F M + + T +L +
Sbjct: 208 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAH----- 262
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
V LH K G+ +++ V ++L+ Y + + A++ + + ++V T++V
Sbjct: 263 -VSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSC 321
Query: 188 YLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
Y ++G + A+ F + + + V+ ++ GC ++ H
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH------------------- 362
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
+ +G H AIK V N LI+ Y+K +E L +F
Sbjct: 363 ----------------IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE 406
Query: 304 KLLKRNIVSCNAVVCGYAQNGRG 326
+L + ++S N+V+ G Q+GR
Sbjct: 407 QLQETPLISWNSVISGCVQSGRA 429
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 6/182 (3%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM-LASKIRPNEFTFGTVLHSSTVLR 126
+F+++ + S ++I G + A +F +M L + P+ T ++L + L
Sbjct: 404 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 463
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ +G++LH + + FV +AL+D+Y K +A+ F + P ++ +++
Sbjct: 464 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 187 GYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFI 241
GY G AL + EM E+ + +++ ++ C+ G +E F M++E G
Sbjct: 524 GYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 583
Query: 242 PT 243
PT
Sbjct: 584 PT 585
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 151/315 (47%), Gaps = 21/315 (6%)
Query: 30 KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESA-------TT 82
+ +H H S + ++ +V K + TF A ++ DE +T S
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLV--------TFYSAFNLLDEAQTITENSEILHPLPWNV 154
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I + + ++++ ++ RM++ IR +EFT+ +V+ + L + GR +H
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
N++V +AL+ +Y + ++ A++ F + VS+ A++ Y + +A ++
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 203 EM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
M E ++V+WN + GGC + G+ A+N + M + + A + I
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 259 ALGMGKRFHACAIK-CLGKLDV-FVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
AL GK FH I+ C D+ V NSLI+ Y++C + + ++F ++ ++ + N++
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSI 394
Query: 317 VCGYAQNGRGGFTSW 331
+ G+A N R TS+
Sbjct: 395 ISGFAYNERSEETSF 409
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 19/277 (6%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
VA +FD +S+ S II + +A L RM S + + T+ T+
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 123 TVLRNVVIGRQLHACATKIGLAS-NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS- 180
+ G + A +G+ + NV +GS + +K + A K +G H V+
Sbjct: 296 -----LEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK-WGKVFHCLVIRS 349
Query: 181 ----------YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVN 230
+L+ Y + A VF ++ ++ +WN+++ G + +EE
Sbjct: 350 CSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSF 409
Query: 231 FFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFV-GNSLISFY 289
+ML GF P T S++ A++ L GK FH ++ D + NSL+ Y
Sbjct: 410 LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMY 469
Query: 290 AKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
AK G + + +F+ + KR+ V+ +++ GY + G+G
Sbjct: 470 AKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F ++ + + +II GFA E+ L ML S PN T ++L + N
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 128 VVIGRQLHA-CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ G++ H + + + ++L+D+Y K I A++ F + + V+YT+L+
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 187 GYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDM 235
GY + G+ E AL F +M + V+ A++ CS + E F M
Sbjct: 499 GYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKM 551
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 151/315 (47%), Gaps = 21/315 (6%)
Query: 30 KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESA-------TT 82
+ +H H S + ++ +V K + TF A ++ DE +T S
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLV--------TFYSAFNLLDEAQTITENSEILHPLPWNV 154
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I + + ++++ ++ RM++ IR +EFT+ +V+ + L + GR +H
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
N++V +AL+ +Y + ++ A++ F + VS+ A++ Y + +A ++
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 203 EM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
M E ++V+WN + GGC + G+ A+N + M + + A + I
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 259 ALGMGKRFHACAIK-CLGKLDV-FVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
AL GK FH I+ C D+ V NSLI+ Y++C + + ++F ++ ++ + N++
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSI 394
Query: 317 VCGYAQNGRGGFTSW 331
+ G+A N R TS+
Sbjct: 395 ISGFAYNERSEETSF 409
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 19/277 (6%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
VA +FD +S+ S II + +A L RM S + + T+ T+
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 123 TVLRNVVIGRQLHACATKIGLAS-NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS- 180
+ G + A +G+ + NV +GS + +K + A K +G H V+
Sbjct: 296 -----LEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK-WGKVFHCLVIRS 349
Query: 181 ----------YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVN 230
+L+ Y + A VF ++ ++ +WN+++ G + +EE
Sbjct: 350 CSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSF 409
Query: 231 FFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFV-GNSLISFY 289
+ML GF P T S++ A++ L GK FH ++ D + NSL+ Y
Sbjct: 410 LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMY 469
Query: 290 AKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
AK G + + +F+ + KR+ V+ +++ GY + G+G
Sbjct: 470 AKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F ++ + + +II GFA E+ L ML S PN T ++L + N
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 128 VVIGRQLHA-CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ G++ H + + + ++L+D+Y K I A++ F + + V+YT+L+
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 187 GYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDM 235
GY + G+ E AL F +M + V+ A++ CS + E F M
Sbjct: 499 GYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKM 551
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 148/317 (46%), Gaps = 43/317 (13%)
Query: 11 RLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKD--IIPYGLDPTTFQVACHM 68
RLS W+ Q Y SL + E+ V + I+ YG C +
Sbjct: 213 RLSEAAWVLGQ--------------YGSLVSGREDLVYAYNTLIVGYGQRGQVEAARC-L 257
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
FD+I DL G+ F +R C N ++ +++ + + +V
Sbjct: 258 FDQIPDLCGDDHGG---EFRERFCK-----------------NVVSWNSMIKAYLKVGDV 297
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
V R L + + ++D YV +S +E+A F + + + S+ +V GY
Sbjct: 298 VSARLLFDQMKD----RDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGY 353
Query: 189 LKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFP 248
G E A F + PE++ VSWN+++ + +EAV+ FI M EG P T
Sbjct: 354 ASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT 413
Query: 249 SVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL-LK 307
S+++A+ + L +G + H +K + DV V N+LI+ Y++CG + +S +F+++ LK
Sbjct: 414 SLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLK 472
Query: 308 RNIVSCNAVVCGYAQNG 324
R +++ NA++ GYA +G
Sbjct: 473 REVITWNAMIGGYAFHG 489
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 33/194 (17%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
++A H F++ + S +II + K +++A+ LF RM +P+ T ++L +S
Sbjct: 360 ELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAS 419
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
T L N+ +G Q+H K T P+V +
Sbjct: 420 TGLVNLRLGMQMHQIVVK--------------------------------TVIPDVPVHN 447
Query: 183 ALVCGYLKRGRFEDALQVFHEMP-ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
AL+ Y + G ++ ++F EM +R V++WNAM+GG + G+ EA+N F M G
Sbjct: 448 ALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIY 507
Query: 242 PTESTFPSVITAAA 255
P+ TF SV+ A A
Sbjct: 508 PSHITFVSVLNACA 521
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 55/278 (19%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
+A +F ++ A N T+ T++ R + R+L K +V + ++
Sbjct: 58 EARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPK----RDVVTWNTMI 109
Query: 155 DLYVK---LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVS 211
YV + +EEA+K F + + S+ ++ GY K R +AL +F +MPERN VS
Sbjct: 110 SGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVS 169
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDM----------LREGFIPTE---------STFPSVIT 252
W+AM+ G Q G + AV F M L G I E + S+++
Sbjct: 170 WSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVS 229
Query: 253 A------AAKIAALGMGKRFHACAIKCL-------------GKL------DVFVGNSLIS 287
A +G G+R A +CL G+ +V NS+I
Sbjct: 230 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIK 289
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
Y K G + + L+F+++ R+ +S N ++ GY R
Sbjct: 290 AYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSR 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 42/174 (24%)
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
L+ ++ I EA+ F + N V++ ++ GY+KR A ++F MP+R+VV+WN
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 214 AMVGG---CSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACA 270
M+ G C EEA F +M PS
Sbjct: 107 TMISGYVSCGGIRFLEEARKLFDEM------------PS--------------------- 133
Query: 271 IKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
D F N++IS YAK + ++LL+F K+ +RN VS +A++ G+ QNG
Sbjct: 134 ------RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNG 181
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 5/261 (1%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM-LASKIRPNEFTFGTVLHSSTVLR 126
+FDEI S T++ K A LF M + FT T+L S T
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
++ GR+LH A +IGL + V +AL+ Y K +++ + + + V++T ++
Sbjct: 300 VLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMIT 359
Query: 187 GYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTEST 246
Y+ G + A+++F + E+N +++NA++ G + GH +A+ F DML+ G T+ +
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 247 FPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
S + A ++ + ++ H IK + + +L+ +C M D+ MF++
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ-W 478
Query: 307 KRNIVSCNA---VVCGYAQNG 324
N+ S A ++ GYA+NG
Sbjct: 479 PSNLDSSKATTSIIGGYARNG 499
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 35/300 (11%)
Query: 28 ITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGF 87
+TK VH + L + E T + +I L + A +F +S T S T +I GF
Sbjct: 98 VTKAVHASF--LKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGF 155
Query: 88 AKRHCHEDAIHLFSRML-ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN 146
++ + +A+ +F RM A ++PNE+TF +L + + +G Q+H K G ++
Sbjct: 156 SRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNS 215
Query: 147 VFVGSALLDLYVKL--STIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
VFV ++L+ LY K S+ ++ K F + +V S+ +V +K G+ A +F+EM
Sbjct: 216 VFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM 275
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
N V EGF T +++++ + L G+
Sbjct: 276 ---NRV---------------------------EGFGVDSFTLSTLLSSCTDSSVLLRGR 305
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
H AI+ ++ V N+LI FY+K M+ ++ ++ ++ V+ ++ Y G
Sbjct: 306 ELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFG 365
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +F +++ + ++ GF + A+ LF+ ML + +F+ + + + +
Sbjct: 370 AVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGL 429
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY--- 181
+ + Q+H K G A N + +ALLD+ + + +A++ F D N+ S
Sbjct: 430 VSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF-DQWPSNLDSSKAT 488
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
T+++ GY + G + A+ +FH C Q F+D
Sbjct: 489 TSIIGGYARNGLPDKAVSLFHRTL-------------CEQ--------KLFLD------- 520
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
E + ++ + MG + H A+K D+ +GNSLIS YAKC +D++ +
Sbjct: 521 --EVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKI 578
Query: 302 FNKLLKRNIVSCNAVVCGY--AQNGRGGFTSWATLG 335
FN + + +++S N+++ Y +NG W+ +
Sbjct: 579 FNTMREHDVISWNSLISCYILQRNGDEALALWSRMN 614
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ 174
F +L S +V + + +HA K+ +G+AL+ Y+KL EA F
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLS 141
Query: 175 HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFID 234
P VVSYTAL+ G+ + +AL+VF M + +V
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQ----------------------- 178
Query: 235 MLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAK--C 292
P E TF +++TA +++ +G + H +K VFV NSL+S Y K
Sbjct: 179 -------PNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSG 231
Query: 293 GSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
S +D L +F+++ +R++ S N VV + G+
Sbjct: 232 SSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKS 265
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 65 ACHMFDEI-SDLTGESATT-IICGFAKRHCHEDAIHLFSRML-ASKIRPNEFTFGTVLHS 121
A MFD+ S+L ATT II G+A+ + A+ LF R L K+ +E + +L
Sbjct: 471 AEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAV 530
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L +G Q+H A K G S++ +G++L+ +Y K ++A K F + +V+S+
Sbjct: 531 CGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISW 590
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNV 209
+L+ Y+ + ++AL ++ M E+ +
Sbjct: 591 NSLISCYILQRNGDEALALWSRMNEKEI 618
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 140/294 (47%), Gaps = 38/294 (12%)
Query: 37 HSLATK---HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCH 93
H + TK +++ VQ ++ + + AC +F E+ S T II GF + +
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
++A+ FS+M + PN T+ VL SS + + +G+ +H K ++ G+AL
Sbjct: 189 KEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
+D+YVK + DA++VF E+ +++ VSWN
Sbjct: 246 IDMYVKCE-------------------------------QLSDAMRVFGELEKKDKVSWN 274
Query: 214 AMVGGCSQTGHNEEAVNFFIDM-LREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
+M+ G ++EA++ F M G P SV++A A + A+ G+ H +
Sbjct: 275 SMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILT 334
Query: 273 CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
K D +G +++ YAKCG +E +L +FN + +N+ + NA++ G A +G G
Sbjct: 335 AGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHG 388
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 34/247 (13%)
Query: 73 SDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGR 132
S L+ S T++ +A I + +++ P+ FTF V + + G+
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 133 QLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRG 192
Q+H TK+G +++V ++L+ Y VCG
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYG--------------------------VCG----- 155
Query: 193 RFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
+A +VF EMP R+VVSW ++ G ++TG +EA++ F M E P +T+ V+
Sbjct: 156 ESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE---PNLATYVCVLV 212
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVS 312
++ ++ L +GK H +K + + GN+LI Y KC + D++ +F +L K++ VS
Sbjct: 213 SSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVS 272
Query: 313 CNAVVCG 319
N+++ G
Sbjct: 273 WNSMISG 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 43/268 (16%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCH--EDAIHLFSRM-LASKIRPNEFTFGTVLHS 121
A +F E+ S ++I G HC ++AI LFS M +S I+P+ +VL +
Sbjct: 258 AMRVFGELEKKDKVSWNSMISGLV--HCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSA 315
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L V GR +H G+ + +G+A++D+Y K
Sbjct: 316 CASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAK---------------------- 353
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
CGY+ E AL++F+ + +NV +WNA++GG + GH E++ +F +M++ GF
Sbjct: 354 ----CGYI-----ETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
Query: 242 PTESTFPSVITAAAKIAALGMGKR-FHACAIK---CLGKLDVFVGNSLISFYAKCGSMED 297
P TF + + A + G+R FH + KL+ + +I + G +++
Sbjct: 405 PNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHY--GCMIDLLCRAGLLDE 462
Query: 298 SLLMFNKL-LKRNIVSCNAVVCGYAQNG 324
+L + + +K ++ C A++ G
Sbjct: 463 ALELVKAMPVKPDVRICGAILSACKNRG 490
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 239 GFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDS 298
GF P TFP V A K + + GK+ H K D++V NSL+ FY CG ++
Sbjct: 101 GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNA 160
Query: 299 LLMFNKLLKRNIVSCNAVVCGYAQNG 324
+F ++ R++VS ++ G+ + G
Sbjct: 161 CKVFGEMPVRDVVSWTGIITGFTRTG 186
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 138/310 (44%), Gaps = 46/310 (14%)
Query: 61 TFQVAC-------HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEF 113
TF V C +FDE+ +I A+ +++++ F M ++ + F
Sbjct: 59 TFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAF 118
Query: 114 TFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDT 173
++L +S L + G+ +H K S+ F+ S+L+D+Y K + A+K F D
Sbjct: 119 IVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDL 178
Query: 174 QHPNVVSYTALVCGYLKRGRFEDALQVFHEM------PE--------------RN----- 208
++V + A++ GY + ++AL + +M P+ RN
Sbjct: 179 GEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVS 238
Query: 209 --------------VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
VVSW +++ G NE+A + F ML G P +T +++ A
Sbjct: 239 EILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Query: 255 AKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCN 314
+A + GK H ++ + FV ++L+ Y KCG + +++++F K K+ V+ N
Sbjct: 299 TTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFN 358
Query: 315 AVVCGYAQNG 324
+++ YA +G
Sbjct: 359 SMIFCYANHG 368
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 84/143 (58%)
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
LV Y++ G+ DA +VF EMP+R++ M+G C++ G+ +E+++FF +M ++G
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
PS++ A+ + GK H +K + D F+ +SLI Y+K G + ++ +F+
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 304 KLLKRNIVSCNAVVCGYAQNGRG 326
L ++++V NA++ GYA N +
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQA 199
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 12/225 (5%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T+II G +E A F +ML + PN T T+L + T L + G+++H +
Sbjct: 255 SWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYS 314
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
GL + FV SALLD+Y K I EA F T V++ +++ Y G + A+
Sbjct: 315 VVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAV 374
Query: 199 QVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
++F +M + + +++ A++ CS G + N F+ M + I P + A
Sbjct: 375 ELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRI-----VPRLEHYA 429
Query: 255 AKIAALG-MGKRFHACA-IKCLG-KLDVFVGNSLISFYAKCGSME 296
+ LG GK A IK + + D+FV +L++ G+ME
Sbjct: 430 CMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNME 474
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 36/237 (15%)
Query: 94 EDAIHLFSRMLA-SKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSA 152
E+A L+ +ML + P++ TF VL + + G+Q+H K G +V+V +
Sbjct: 132 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 191
Query: 153 LLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSW 212
L+ LY CG L R +VF EMPER++VSW
Sbjct: 192 LIHLYGS--------------------------CGCLDLAR-----KVFDEMPERSLVSW 220
Query: 213 NAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
N+M+ + G + A+ F +M R F P T SV++A A + +L +G HA ++
Sbjct: 221 NSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR 279
Query: 273 CLG---KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+DV V NSLI Y KCGS+ + +F + KR++ S NA++ G+A +GR
Sbjct: 280 KCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRA 336
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 37/210 (17%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
+A +FDE+ + + S ++I + ++ A+ LF M S P+ +T +VL +
Sbjct: 202 LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSA 260
Query: 122 STVLRNVVIGRQLHACATK---IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNV 178
L ++ +G HA + + +A +V V ++L+++Y K
Sbjct: 261 CAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCK------------------- 301
Query: 179 VSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML-- 236
CG L+ A QVF M +R++ SWNAM+ G + G EEA+NFF M+
Sbjct: 302 -------CGSLRM-----AEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRF 266
RE P TF ++ A + G+++
Sbjct: 350 RENVRPNSVTFVGLLIACNHRGFVNKGRQY 379
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 120/242 (49%), Gaps = 31/242 (12%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+II F+K +A+ + ++ SK+ P+++TF +V+ + L + +G ++
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+G S++FVG+AL+D+Y ++ G L R R QV
Sbjct: 135 MGFESDLFVGNALVDMYSRM--------------------------GLLTRAR-----QV 163
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F EMP R++VSWN+++ G S G+ EEA+ + ++ +P T SV+ A + +
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
G+ H A+K V V N L++ Y K D+ +F+++ R+ VS N ++CGY
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 321 AQ 322
+
Sbjct: 284 LK 285
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 31/248 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +II G+ + +A+ LF M+ + + + T+ ++ ST L ++ G+ LH+
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K G+ ++ V +AL+D+Y K CG + D+L
Sbjct: 435 IKSGICIDLSVSNALIDMYAK--------------------------CGEVG-----DSL 463
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
++F M + V+WN ++ C + G + M + +P +TF + A +A
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
A +GK H C ++ + ++ +GN+LI Y+KCG +E+S +F ++ +R++V+ ++
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 319 GYAQNGRG 326
Y G G
Sbjct: 584 AYGMYGEG 591
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 123/260 (47%), Gaps = 32/260 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDE+ S ++I G++ +E+A+ ++ + S I P+ FT +VL +
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGN 219
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L V G+ LH A K G+ S V V + L+ +Y+K +A++ F + + VSY +
Sbjct: 220 LLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTM 279
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+CGYLK MV EE+V F++ L + F P
Sbjct: 280 ICGYLKL----------------------EMV---------EESVRMFLENLDQ-FKPDL 307
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T SV+ A + L + K + +K L+ V N LI YAKCG M + +FN
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 305 LLKRNIVSCNAVVCGYAQNG 324
+ ++ VS N+++ GY Q+G
Sbjct: 368 MECKDTVSWNSIISGYIQSG 387
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 32/194 (16%)
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKR 191
R++HA +GL S+ F L+D Y + P
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHF-------------REP--------------- 55
Query: 192 GRFEDALQVFHEM-PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSV 250
+L VF + P +NV WN+++ S+ G EA+ F+ + P + TFPSV
Sbjct: 56 ---ASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSV 112
Query: 251 ITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
I A A + MG + + + D+FVGN+L+ Y++ G + + +F+++ R++
Sbjct: 113 IKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL 172
Query: 311 VSCNAVVCGYAQNG 324
VS N+++ GY+ +G
Sbjct: 173 VSWNSLISGYSSHG 186
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 117/272 (43%), Gaps = 20/272 (7%)
Query: 76 TGESAT--TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQ 133
TG++ T T+I + + + ++M S++ P+ TF L L +G++
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530
Query: 134 LHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGR 193
+H C + G S + +G+AL+++Y K +E + + F +VV++T ++ Y G
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE 590
Query: 194 FEDALQVFHEMPERNVVS----WNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFP 248
E AL+ F +M + +V + A++ CS +G +E + F M I P +
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYA 650
Query: 249 SVITAAAKIAALGMGKRF-HACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
V+ ++ + + F A IK D + S++ G ME + + +
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIKP----DASIWASVLRACRTSGDMETA-----ERVS 701
Query: 308 RNIVSCNAVVCGY---AQNGRGGFTSWATLGL 336
R I+ N GY A N W + L
Sbjct: 702 RRIIELNPDDPGYSILASNAYAALRKWDKVSL 733
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 6/217 (2%)
Query: 110 PNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKA 169
P+ F +++ S + ++ + + +HA + G + G+ L LY K ++ A +
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 170 FGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAV 229
F D N +++ + G K G +AL +F EMPER+VVSWN M+ G G +E +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 230 NFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG--KLDVFVGNSLIS 287
F DM R PTE TF + A+ + + G++ H AI C G + ++ V NS++
Sbjct: 122 RVFFDMQRWEIRPTEFTFSIL---ASLVTCVRHGEQIHGNAI-CSGVSRYNLVVWNSVMD 177
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
Y + G + +L +F + R++VS N ++ + +G
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSG 214
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 45/263 (17%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDE+ + S T+I G HE I +F M +IRP EFTF + T
Sbjct: 89 ALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTC 148
Query: 125 LRNVVIGRQLHACATKIGLAS-NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
+R+ G Q+H A G++ N+ V ++++D+Y +L
Sbjct: 149 VRH---GEQIHGNAICSGVSRYNLVVWNSVMDMYRRL----------------------- 182
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
G F+ AL VF M +R+VVSWN ++ CS +G+ E A++ F M P
Sbjct: 183 --------GVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSL-----ISFYAKCGSMEDS 298
E T V++ + + L GK+ A IK +G F+ NS+ I ++KC ++DS
Sbjct: 235 EYTVSMVVSICSDLRELSKGKQALALCIK-MG----FLSNSIVLGAGIDMFSKCNRLDDS 289
Query: 299 LLMFNKLLKRNIVSCNAVVCGYA 321
+ +F +L K + V CN+++ Y+
Sbjct: 290 VKLFRELEKWDSVLCNSMIGSYS 312
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 132/309 (42%), Gaps = 32/309 (10%)
Query: 18 ITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTG 77
I +V+C + +H + N VV ++ F A +F + D
Sbjct: 141 ILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 78 ESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHAC 137
S +I + E A+ F M +I+P+E+T V+ + LR + G+Q A
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDA 197
K+G SN V A +D++ K + R +D+
Sbjct: 261 CIKMGFLSNSIVLGAGIDMFSKCN-------------------------------RLDDS 289
Query: 198 LQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKI 257
+++F E+ + + V N+M+G S E+A+ FI + + P + TF SV+++ +
Sbjct: 290 VKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV 349
Query: 258 AALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVV 317
L G H+ IK LD V SL+ Y K GS++ ++ +F K ++++ N V+
Sbjct: 350 M-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVI 408
Query: 318 CGYAQNGRG 326
G A+N R
Sbjct: 409 MGLARNSRA 417
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 39/268 (14%)
Query: 67 HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLR 126
+F++I + ++I GF + DAI F M ++ ++ NE +L + +
Sbjct: 163 RVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCK 222
Query: 127 NVVIGRQLHACATKIGLAS--------NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNV 178
++V G+ H +G NV + ++L+D+Y K
Sbjct: 223 DIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAK------------------- 263
Query: 179 VSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
CG L+ R+ +F MPER +VSWN+++ G SQ G EEA+ F+DML
Sbjct: 264 -------CGDLRTARY-----LFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL 311
Query: 239 GFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDS 298
G P + TF SVI A+ +G+ HA K D + +L++ YAK G E +
Sbjct: 312 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 299 LLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
F L K++ ++ V+ G A +G G
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHG 399
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 150/342 (43%), Gaps = 65/342 (19%)
Query: 1 MRTHMKNLVSRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYG--LD 58
M+ H K ++S+L +CR + + H L K + V +++IP +D
Sbjct: 2 MKKHYKPILSQLE----------NCRSLVEL--NQLHGLMIK---SSVIRNVIPLSRLID 46
Query: 59 -----PTTFQV--ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPN 111
P T + A +F+ I + ++I G++ + A+ + ML P+
Sbjct: 47 FCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPD 106
Query: 112 EFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFG 171
FTF VL + + LR++ G +H K G N++V + LL +Y
Sbjct: 107 YFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMY-------------- 152
Query: 172 DTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNF 231
+ CG + G L+VF ++P+ NVV+W +++ G +A+
Sbjct: 153 ------------MCCGEVNYG-----LRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEA 195
Query: 232 FIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG---------KLDVFVG 282
F +M G E+ ++ A + + GK FH ++ LG +V +
Sbjct: 196 FREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG-FLQGLGFDPYFQSKVGFNVILA 254
Query: 283 NSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
SLI YAKCG + + +F+ + +R +VS N+++ GY+QNG
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
N ++ +I + A ++FD + + T S +II G+++ E+A+ +F ML
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
I P++ TF +V+ +S + +G+ +HA +K G + + AL+++Y K E
Sbjct: 310 DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAE 369
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER-----NVVSWNAMVGGC 219
A+KAF D + + +++T ++ G G +AL +F M E+ + +++ ++ C
Sbjct: 370 SAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429
Query: 220 SQTGHNEEAVNFFIDMLR-EGFIPT 243
S G EE +F +M G PT
Sbjct: 430 SHIGLVEEGQRYFAEMRDLHGLEPT 454
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 70/129 (54%)
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A VF + +V WN+M+ G S + + ++A+ F+ +MLR+G+ P TFP V+ A +
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
+ + G H +K +++++V L+ Y CG + L +F + + N+V+ ++
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 317 VCGYAQNGR 325
+ G+ N R
Sbjct: 180 ISGFVNNNR 188
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 111 NEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF 170
+ + + + S + R+ G H A K G S+V++GS+L+ LY
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY------------- 165
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVN 230
G E+A +VF EMPERNVVSW AM+ G +Q + +
Sbjct: 166 ------------------RDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLK 207
Query: 231 FFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYA 290
+ M + P + TF ++++A ALG G+ H + K + + NSLIS Y
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 291 KCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
KCG ++D+ +F++ +++VS N+++ GYAQ+G
Sbjct: 268 KCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 100/208 (48%), Gaps = 5/208 (2%)
Query: 58 DPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
D + A +F+E+ + S T +I GFA+ + + L+S+M S PN++TF
Sbjct: 167 DSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTA 226
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN 177
+L + T + GR +H +GL S + + ++L+ +Y K +++A + F + +
Sbjct: 227 LLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKD 286
Query: 178 VVSYTALVCGYLKRGRFEDALQVFHEMPER-----NVVSWNAMVGGCSQTGHNEEAVNFF 232
VVS+ +++ GY + G A+++F M + + +++ ++ C G +E FF
Sbjct: 287 VVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF 346
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAAL 260
M G P + + ++ + L
Sbjct: 347 NLMAEHGLKPELNHYSCLVDLLGRFGLL 374
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 31/245 (12%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I G+ + D++ +F ++ KI PNE T ++L +L + +GR+LH K
Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G + +G A++D+Y K GR A ++
Sbjct: 470 KGFDNRCNIGCAVIDMYAKC-------------------------------GRMNLAYEI 498
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F + +R++VSWN+M+ C+Q+ + A++ F M G + + ++A A + +
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
GK H IK DV+ ++LI YAKCG+++ ++ +F + ++NIVS N+++
Sbjct: 559 SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAAC 618
Query: 321 AQNGR 325
+G+
Sbjct: 619 GNHGK 623
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 33/277 (11%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F A +F +S + +I G+ + E+++ F M++S + P+ TF ++L S
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ N+ +Q+H + ++ ++F+ SAL+D Y K + AQ F +VV +
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF 409
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
TA++ GYL G + D+L++F W +++
Sbjct: 410 TAMISGYLHNGLYIDSLEMFR---------W----------------------LVKVKIS 438
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P E T S++ + AL +G+ H IK +G ++I YAKCG M + +
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 302 FNKLLKRNIVSCNAVV--CGYAQNGRGGFTSWATLGL 336
F +L KR+IVS N+++ C + N + +G+
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV 535
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 31/280 (11%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
N V +I L+ V +FD + ++ G+AK + I FS M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
+I PN TF VL + +G QLH G+ + ++LL +Y K
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC---- 287
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
GRF+DA ++F M + V+WN M+ G Q+G
Sbjct: 288 ---------------------------GRFDDASKLFRMMSRADTVTWNCMISGYVQSGL 320
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNS 284
EE++ FF +M+ G +P TF S++ + +K L K+ H ++ LD+F+ ++
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 285 LISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
LI Y KC + + +F++ ++V A++ GY NG
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNG 420
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 6/195 (3%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
+A +F+ +S S ++I A+ AI +F +M S I + + L +
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
L + G+ +H K LAS+V+ S L+D+Y K ++ A F + N+VS+
Sbjct: 553 ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 183 ALVCGYLKRGRFEDALQVFHEMPER-----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
+++ G+ +D+L +FHEM E+ + +++ ++ C G +E V FF M
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTE 672
Query: 238 E-GFIPTESTFPSVI 251
+ G P + + V+
Sbjct: 673 DYGIQPQQEHYACVV 687
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 31/244 (12%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+II F + A+ + +ML + P+ TF ++ + L+N L +
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSS 166
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+G+ N FV S+L+ Y++ I+ K F + V + ++ GY K G + ++
Sbjct: 167 LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKG 226
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F M + +S NA+ TF V++ A +
Sbjct: 227 FSVM-RMDQISPNAV------------------------------TFDCVLSVCASKLLI 255
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
+G + H + + + NSL+S Y+KCG +D+ +F + + + V+ N ++ GY
Sbjct: 256 DLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGY 315
Query: 321 AQNG 324
Q+G
Sbjct: 316 VQSG 319
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 192 GRFEDALQVFHEMPER--NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
G F D ++F+ + R ++ WN+++ + G +A+ F+ ML G P STFP
Sbjct: 84 GSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPC 143
Query: 250 VITAAAKIAALGMGKRFHACAIKCLG-KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR 308
++ A + G F + + LG + FV +SLI Y + G ++ +F+++L++
Sbjct: 144 LVKACVALKNFK-GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK 202
Query: 309 NIVSCNAVVCGYAQNG 324
+ V N ++ GYA+ G
Sbjct: 203 DCVIWNVMLNGYAKCG 218
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 104/182 (57%), Gaps = 5/182 (2%)
Query: 146 NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
+V + +A++D +VK + A++ F + H V+++T ++ GY + A ++F MP
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 206 ERNVVSWNAMVGGCSQTGHNEEAVNFFIDM-LREGFIPTESTFPSVITAAAKIAALGMGK 264
ERN+VSWN M+GG Q +E + F +M P + T SV+ A + AL +G+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 265 RFHACAIKCLGKLD--VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
H C ++ KLD V V +++ Y+KCG +E + +F+++ ++ + S NA++ GYA
Sbjct: 295 WCH-CFVQ-RKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 323 NG 324
NG
Sbjct: 353 NG 354
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 116/246 (47%), Gaps = 41/246 (16%)
Query: 80 ATTIICGFAKRHCHEDAIHLFSRMLASK-IRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
+ ++I + + + D+ L+ + P+ FTF T+ S ++ V G QLH+
Sbjct: 45 SNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQI 104
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
+ G ++++V + ++D+Y K + A+ AF + H + VS+TAL+ GY++ G + A
Sbjct: 105 WRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLAS 164
Query: 199 QVFHEMPE-RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKI 257
++F +MP ++VV +NAM+ G ++G A F +M T +VIT
Sbjct: 165 KLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEM----------THKTVIT----- 209
Query: 258 AALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVV 317
++I Y ++ + +F+ + +RN+VS N ++
Sbjct: 210 ------------------------WTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 318 CGYAQN 323
GY QN
Sbjct: 246 GGYCQN 251
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 62/263 (23%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSST 123
A +FD + + S T+I G+ + ++ I LF M A+ + P++ T +VL + +
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
+ +G H + L V V +A+LD+Y K IE+A+
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAK---------------- 329
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
++F EMPE+ V SWNAM+ G + G+ A++ F+ M+ E P
Sbjct: 330 ---------------RIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPD 373
Query: 244 ESTFPSVITAAAKIAALGMGKRF---------------HACAIKCLGKL-------DV-- 279
E T +VITA + G+++ + C + LG+ D+
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLIT 433
Query: 280 ---FVGNSLI--SFYAKCGSMED 297
F N +I SF + CG +D
Sbjct: 434 NMPFEPNGIILSSFLSACGQYKD 456
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 127/265 (47%), Gaps = 32/265 (12%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM-LASKIRPNEFTFGTVLH 120
+ A +FDE+++ S T ++ G+ K+ E+A+ L+S M RPN FT +
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVA 226
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
++ ++ + G+++H + GL S+ + S+L+D+Y K I+EA+ F +VVS
Sbjct: 227 AAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVS 286
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+T+++ Y K R+ + +F E +VG C +
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSE-----------LVGSCER------------------- 316
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
P E TF V+ A A + +GK+ H + F +SL+ Y KCG++E +
Sbjct: 317 -PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNGR 325
+ + K ++VS +++ G AQNG+
Sbjct: 376 VVDGCPKPDLVSWTSLIGGCAQNGQ 400
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 134/264 (50%), Gaps = 20/264 (7%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
A ++CG + +A+ L R +P T+ ++ + R + G+++H
Sbjct: 59 EAIDVLCG---QKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHI 111
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
G + + + LL +Y K ++ +A+K F + + ++ S+ +V GY + G E+A
Sbjct: 112 RTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEAR 171
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA---- 254
++F EM E++ SW AMV G + EEA+ + M R +P ++ P++ T +
Sbjct: 172 KLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR---VP--NSRPNIFTVSIAVA 226
Query: 255 --AKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVS 312
A + + GK H ++ D + +SL+ Y KCG ++++ +F+K++++++VS
Sbjct: 227 AAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVS 286
Query: 313 CNAVVCGYAQNG--RGGFTSWATL 334
+++ Y ++ R GF+ ++ L
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSEL 310
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 31/202 (15%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A ++FD+I + S T++I + K + LFS ++ S RPNE+TF VL++
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACAD 331
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L +G+Q+H T++G F S+L+D+Y K IE A+ P++VS+T+L
Sbjct: 332 LTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSL 391
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
+ GGC+Q G +EA+ +F +L+ G P
Sbjct: 392 I-------------------------------GGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 245 STFPSVITAAAKIAALGMGKRF 266
TF +V++A + G F
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEF 442
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 36/233 (15%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG-LASNVFVGSAL 153
DAI +F L + PN++ + V+ + + V +GR K G S+V VG +L
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
+D++VK FE+A +VF +M E NVV+W
Sbjct: 209 IDMFVK------------------------------GENSFENAYKVFDKMSELNVVTWT 238
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC 273
M+ C Q G EA+ FF+DM+ GF + T SV +A A++ L +GK+ H+ AI+
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 274 LGKLDVFVGNSLISFYAKC---GSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
G +D V SL+ YAKC GS++D +F+++ +++S A++ GY +N
Sbjct: 299 -GLVDD-VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 132/260 (50%), Gaps = 35/260 (13%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCH--EDAIHLFSRMLAS-KIRPNEFTFGTVLHSSTV 124
+FD + D + S T +I G+ K +C+ +AI+LFS M+ + PN FTF + +
Sbjct: 327 VFDRMEDHSVMSWTALITGYMK-NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L + +G+Q+ A K GLASN V ++++ ++VK
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK------------------------- 420
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
R EDA + F + E+N+VS+N + G + + E+A ++ +
Sbjct: 421 ------SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
TF S+++ A + ++ G++ H+ +K + V N+LIS Y+KCGS++ + +FN
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 305 LLKRNIVSCNAVVCGYAQNG 324
+ RN++S +++ G+A++G
Sbjct: 535 MENRNVISWTSMITGFAKHG 554
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 36/268 (13%)
Query: 60 TTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL 119
+F+ A +FD++S+L + T +I + +AI F M+ S ++FT +V
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLS---TIEEAQKAFGDTQHP 176
+ L N+ +G+QLH+ A + GL + V +L+D+Y K S ++++ +K F +
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
+V+S+TAL+ GY+K C+ EA+N F +M+
Sbjct: 335 SVMSWTALITGYMK---------------------------NCNLA---TEAINLFSEMI 364
Query: 237 REGFI-PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSM 295
+G + P TF S A ++ +GK+ A K + V NS+IS + K M
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424
Query: 296 EDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
ED+ F L ++N+VS N + G +N
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
N+ V +I + + A F+ +S+ S T + G + E A L S +
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
++ + FTF ++L + ++ G Q+H+ K+GL+ N V +AL+ +Y K +I+
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCS 220
A + F ++ NV+S+T+++ G+ K G L+ F++M E N V++ A++ CS
Sbjct: 527 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Query: 221 QTGHNEEAVNFFIDMLRE 238
G E F M +
Sbjct: 587 HVGLVSEGWRHFNSMYED 604
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 39/236 (16%)
Query: 96 AIHLFSRMLASKIRP-NEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
A+ M IRP + TF ++L S R+ +G+ +HA L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHA---------------RLI 89
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRG---RFEDALQVFHEMPERNVVS 211
+ ++ P+ V Y +L+ Y K G + ED + +R+VVS
Sbjct: 90 EFDIE----------------PDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVS 133
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI 271
W+AM+ G +A+ F++ L G +P + + +VI A + +G+G+ +
Sbjct: 134 WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLM 193
Query: 272 KCLGKL--DVFVGNSLISFYAKC-GSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
K G DV VG SLI + K S E++ +F+K+ + N+V+ ++ Q G
Sbjct: 194 KT-GHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 235 MLREGFIPTES-TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCG 293
M R+G P +S TF S++ + + +GK HA I+ + D + NSLIS Y+K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 294 S---MEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
ED + KR++VS +A++ Y NGR
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGR 146
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 39/267 (14%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD + S ++I G+ + E+ ++L ++M + + G+VL + +
Sbjct: 202 AMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCI 261
Query: 125 LRN---VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
N + G +H K+G+ ++ V +ALLD+Y
Sbjct: 262 NLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYA----------------------- 298
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH-----NEEAVNFFIDML 236
K G ++A+++F MP +NVV++NAM+ G Q + EA F+DM
Sbjct: 299 --------KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
R G P+ STF V+ A + L G++ HA K + D F+G++LI YA GS E
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE 410
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQN 323
D + F K++I S +++ + QN
Sbjct: 411 DGMQCFASTSKQDIASWTSMIDCHVQN 437
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD + + S ++I G+ + +E A+ LF + ++ ++FT+ L
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
++ +G LH GL+ VF+ + L+D+Y K
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKC------------------------ 196
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
G+ + A+ +F ER+ VSWN+++ G + G EE +N M R+G T
Sbjct: 197 -------GKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTT 249
Query: 245 STFPSVITAAAKIAALGM---GKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
SV+ A G G H K + D+ V +L+ YAK GS+++++ +
Sbjct: 250 YALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKL 309
Query: 302 FNKLLKRNIVSCNAVVCGYAQ 322
F+ + +N+V+ NA++ G+ Q
Sbjct: 310 FSLMPSKNVVTYNAMISGFLQ 330
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 52/287 (18%)
Query: 44 ENTVVQKDIIPYGLDPT----TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHL 99
+N +++ I + L P+ T+ F ++ ++T E+++ +A L
Sbjct: 299 KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASS-------------EAFKL 345
Query: 100 FSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVK 159
F M + P+ TF VL + + + + GRQ+HA K S+ F+GSAL++LY
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 160 LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGC 219
+ + E+ + F T ++ S+T+++ +++ + E A +F ++
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL--------------- 450
Query: 220 SQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDV 279
F +R P E T +++A A AAL G++ AIK +D
Sbjct: 451 ------------FSSHIR----PEEYTVSLMMSACADFAALSSGEQIQGYAIK--SGIDA 492
Query: 280 F--VGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
F V S IS YAK G+M + +F ++ ++ + +A++ AQ+G
Sbjct: 493 FTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 71/128 (55%)
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A Q+F MPERN++S+N+++ G +Q G E+A+ F++ + T+ + +
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
L +G+ H + VF+ N LI Y+KCG ++ ++ +F++ +R+ VS N++
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 317 VCGYAQNG 324
+ GY + G
Sbjct: 221 ISGYVRVG 228
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T++I + E A LF ++ +S IRP E+T ++ + + G Q+ A
Sbjct: 426 SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYA 485
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K G+ + V ++ + +Y K + A + F + Q+P+V +Y+A++ + G +AL
Sbjct: 486 IKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEAL 545
Query: 199 QVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITA 253
+F M + N ++ ++ C G + + +F M + I P E F ++
Sbjct: 546 NIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDL 605
Query: 254 AAKIAAL 260
+ L
Sbjct: 606 LGRTGRL 612
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 37/271 (13%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
++ + ++ M S I P+ +VL + + N+V G+ +HA A K GL V+V + L
Sbjct: 86 KETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGL 145
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
+ LY +L IE A+KAF D N VS+ +L+ GYL+ G ++A +VF ++PE++ VSWN
Sbjct: 146 VGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWN 205
Query: 214 AMVGGCSQTGHNEEAVNFFIDM----------LREGFI---------------PTES--T 246
++ ++ G A + F M L G++ P ++ +
Sbjct: 206 LIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVS 265
Query: 247 FPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
+ ++I+ K+ + + + + K D V +++I+ Y + G +D+L +F ++L
Sbjct: 266 WITMISGYTKLGDVQSAEEL----FRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQML 321
Query: 307 KRNI------VSCNAVVCGYAQNGRGGFTSW 331
+RN ++ ++VV +Q G F +W
Sbjct: 322 ERNSYIQPDEITLSSVVSANSQLGNTSFGTW 352
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 47/297 (15%)
Query: 36 YHSLATKHENTVVQKDIIPYG------LDPTTFQVACHMFDEISDLTGESATTIICGFAK 89
Y LA K + + +K+ + + L+ A +FD+I + S II +AK
Sbjct: 154 YIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAK 213
Query: 90 RHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFV 149
+ +A LFS M K + N+ +
Sbjct: 214 KGDMGNACSLFSAM----------------------------------PLKSPASWNILI 239
Query: 150 GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
G YV ++ A+ F N VS+ ++ GY K G + A ++F M +++
Sbjct: 240 GG-----YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDK 294
Query: 210 VSWNAMVGGCSQTGHNEEAVNFFIDML-REGFI-PTESTFPSVITAAAKIAALGMGKRFH 267
+ ++AM+ +Q G ++A+ F ML R +I P E T SV++A +++ G
Sbjct: 295 LVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE 354
Query: 268 ACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ + K+D + SLI Y K G + MF+ L K++ VS +A++ G NG
Sbjct: 355 SYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGING 411
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 9/244 (3%)
Query: 23 VSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATT 82
V+CR + K T++ ++ K N V +I Q A +F +S
Sbjct: 243 VNCREM-KLARTYFDAMPQK--NGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDA 299
Query: 83 IICGFAKRHCHEDAIHLFSRMLA--SKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+I + + +DA+ LF++ML S I+P+E T +V+ +++ L N G + + T+
Sbjct: 300 MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE 359
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G+ + + ++L+DLY+K +A K F + + VSY+A++ G G +A +
Sbjct: 360 HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSL 419
Query: 201 FHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
F M E+ NVV++ ++ S +G +E F M P+ + ++ +
Sbjct: 420 FTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGR 479
Query: 257 IAAL 260
L
Sbjct: 480 AGRL 483
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 211 SWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACA 270
SW +V SQ +E V+ +IDM G P+ SV+ A K+ + GK HA A
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 271 IKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+K V+V L+ Y++ G +E + F+ + ++N VS N+++ GY ++G
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 133/263 (50%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A ++FDE+S + T+I + + ++A LF M S + P+E ++ +
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
N+ R ++ + + + + +AL+ +Y ++ A++ F N+ TA+
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 284
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
V GY K GR +DA +F + ++++V W M+ ++ + +EA+ F +M G P
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
+ SVI+A A + L K H+C + ++ + N+LI+ YAKCG ++ + +F K
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 305 LLKRNIVSCNAVVCGYAQNGRGG 327
+ +RN+VS ++++ + +G
Sbjct: 405 MPRRNVVSWSSMINALSMHGEAS 427
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 109 RPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQK 168
R ++F+F +L + + + + G +LH A KI + FV + +D+Y
Sbjct: 108 RLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASC-------- 159
Query: 169 AFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEA 228
GR A VF EM R+VV+WN M+ + G +EA
Sbjct: 160 -----------------------GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 229 VNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISF 288
F +M +P E ++++A + + + + I+ ++D + +L++
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 289 YAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
YA G M+ + F K+ RN+ A+V GY++ GR
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGR 293
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD+ TT+I + + ++A+ +F M S I+P+ + +V+ + L
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ + +H+C GL S + + +AL+++Y K CG
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAK--------------------------CG 393
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
L R VF +MP RNVVSW++M+ S G +A++ F M +E P E TF
Sbjct: 394 GLDATR-----DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTF 448
Query: 248 PSVITAAAKIAALGMGKRFHA 268
V+ + + GK+ A
Sbjct: 449 VGVLYGCSHSGLVEEGKKIFA 469
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 197 ALQVFHEMPER-NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAA 255
AL VF +P + +N + S++ + F+ + G + +F ++ A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 256 KIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNA 315
K++AL G H A K D FV + YA CG + + +F+++ R++V+ N
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 316 VVCGYAQNG 324
++ Y + G
Sbjct: 183 MIERYCRFG 191
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 85/145 (58%)
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
TAL Y K E A ++F E PE+++ SWNAM+ G +Q G E+A++ F +M + F
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS 417
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P T +++A A++ AL +GK H + ++V +LI YAKCGS+ ++ +
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 302 FNKLLKRNIVSCNAVVCGYAQNGRG 326
F+ + K+N V+ N ++ GY +G+G
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQG 502
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 33/245 (13%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
++ GF+ ++ +F+ + S ++PN T+ + +++ R+ GR +H A
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF 201
G S + +GS ++ +Y K R EDA +VF
Sbjct: 149 GCDSELLLGSNIVKMYFKF-------------------------------WRVEDARKVF 177
Query: 202 HEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE-STFPSVITAAAKIAAL 260
MPE++ + WN M+ G + E++ F D++ E + +T ++ A A++ L
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
+G + H+ A K +V IS Y+KCG ++ +F + K +IV+ NA++ GY
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 321 AQNGR 325
NG
Sbjct: 298 TSNGE 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
+ A +FDE + + S +I G+ + EDAI LF M S+ PN T +L +
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
L + +G+ +H S+++V +AL+ +Y K +I EA++ F N V++
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDML-R 237
++ GY G+ ++AL +F+EM + V++ ++ CS G +E F M+ R
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 238 EGFIPT 243
GF P+
Sbjct: 551 YGFEPS 556
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 35/261 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML-ASKIRPNEFTFGTVLHSST 123
A +FD + + T+I G+ K + ++I +F ++ S R + T +L +
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
L+ + +G Q+H+ ATK G S+ +V + + LY K I+ F + + P++V+Y A
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
++ GY G E +L +F E+ M+ G LR
Sbjct: 293 MIHGYTSNGETELSLSLFKEL----------MLSGAR---------------LR------ 321
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
ST S++ + + + H +K V +L + Y+K +E + +F+
Sbjct: 322 SSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD 378
Query: 304 KLLKRNIVSCNAVVCGYAQNG 324
+ ++++ S NA++ GY QNG
Sbjct: 379 ESPEKSLPSWNAMISGYTQNG 399
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F+E+ S T++ +A E+ + LF M +R N+ + L ++ + +
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+V G +H A + GL +V V ++L+ +Y K CG
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSK--------------------------CG 349
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
L E A Q+F + +R+VVSW+AM+ Q G ++EA++ F DM+R P T
Sbjct: 350 EL-----EIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTL 404
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
SV+ A +AA +GK H AIK + ++ ++IS YAKCG +L F +L
Sbjct: 405 TSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPI 464
Query: 308 RNIVSCNAVVCGYAQNG 324
++ V+ NA+ GY Q G
Sbjct: 465 KDAVAFNALAQGYTQIG 481
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 32/266 (12%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
++A +F I D S + +I + + H++AI LF M+ I+PN T +VL
Sbjct: 351 LEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQG 410
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ +G+ +H A K + S + +A++ +Y K
Sbjct: 411 CAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKC--------------------- 449
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
GRF AL+ F +P ++ V++NA+ G +Q G +A + + +M G
Sbjct: 450 ----------GRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P T ++ A + G + IK + V ++LI+ + KC ++ ++++
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVL 559
Query: 302 FNKL-LKRNIVSCNAVVCGYAQNGRG 326
F+K +++ VS N ++ GY +G+
Sbjct: 560 FDKCGFEKSTVSWNIMMNGYLLHGQA 585
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A ++ M + P+ T +L + + G ++ K G S V AL++
Sbjct: 486 AFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALIN 545
Query: 156 LYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAM 215
++ K + A F CG+ E++ VSWN M
Sbjct: 546 MFTKCDALAAAIVLFDK-------------CGF-----------------EKSTVSWNIM 575
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG 275
+ G G EEAV F M E F P TF +++ AAA+++AL +G H+ I+C
Sbjct: 576 MNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF 635
Query: 276 KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
VGNSL+ YAKCG +E S F ++ + IVS N ++ YA +G
Sbjct: 636 CSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHG 684
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 36/259 (13%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK-IRPNEFTFGTVLHSSTVLR 126
+FD + D ++I G+ + H +A+ F M K I P++++F L +
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ G ++H ++GL S+V++G+AL+++Y K + A+
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSAR------------------- 155
Query: 187 GYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTEST 246
QVF +M ++VV+WN MV G +Q G + A+ F DM +
Sbjct: 156 ------------QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVS 203
Query: 247 FPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNS-LISFYAKCGSMEDSLLMFNKL 305
++I A +K+ + + H IK K +F +S LI Y C + + +F ++
Sbjct: 204 LYNLIPAVSKLEKSDVCRCLHGLVIK---KGFIFAFSSGLIDMYCNCADLYAAESVFEEV 260
Query: 306 LKRNIVSCNAVVCGYAQNG 324
+++ S ++ YA NG
Sbjct: 261 WRKDESSWGTMMAAYAHNG 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
E+A+ F +M K +PN TF ++ ++ L + +G +H+ + G S VG++L
Sbjct: 586 EEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSL 645
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV---- 209
+D+Y K IE ++K F + + +VS+ ++ Y G A+ +F M E +
Sbjct: 646 VDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDS 705
Query: 210 VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
VS+ +++ C G EE F +M I E
Sbjct: 706 VSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAE 740
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 37/261 (14%)
Query: 67 HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLR 126
+FD++ + T++ G A+ C A+ LF M + + + + ++ + + L
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE 215
Query: 127 NVVIGRQLHACATKIGLASNVFV-GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALV 185
+ R LH K G +F S L+D+Y + + A+
Sbjct: 216 KSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAE------------------ 254
Query: 186 CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
VF E+ ++ SW M+ + G EE + F D++R +
Sbjct: 255 -------------SVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF-DLMRNYDVRMNK 300
Query: 246 TFPSVITAAAK-IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
+ AA + L G H A++ DV V SL+S Y+KCG +E + +F
Sbjct: 301 VAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFIN 360
Query: 305 LLKRNIVSCNAVVCGYAQNGR 325
+ R++VS +A++ Y Q G+
Sbjct: 361 IEDRDVVSWSAMIASYEQAGQ 381
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 39/299 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML--ASKIRPNEFTFGTVLHSS 122
A +F E+ + S T +I GFA + +A+ LF M + PN T ++ ++
Sbjct: 250 AYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Query: 123 TVL--RNVVIGRQLHACATKIGL-----------------ASNVFVGSA----------- 152
L +G QLHA G AS+ + SA
Sbjct: 310 GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQ 369
Query: 153 ----LLDLYVKLSTIEEAQKAFGDTQHP-NVVSYTALVCGYLKRGRFEDALQVFHEMPER 207
+++ Y+K +E A+ F + + VS+T+++ GYL+ G A +F ++ ++
Sbjct: 370 SCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK 429
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFH 267
+ V+W M+ G Q EA + DM+R G P ST+ ++++A + L GK H
Sbjct: 430 DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH 489
Query: 268 ACAIKCLG--KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
K D+ + NSL+S YAKCG++ED+ +F K+++++ VS N+++ G + +G
Sbjct: 490 CVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHG 548
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 152/335 (45%), Gaps = 26/335 (7%)
Query: 4 HMKNLVSRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQ 63
H ++L+ ++ I V ++K T Y A + +++I+ T +
Sbjct: 60 HARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGY- 118
Query: 64 VACHMFDEISDLTGE------SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
V C +E L E S T ++ EDA+ LF M N ++ T
Sbjct: 119 VKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEM----PERNVVSWNT 174
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLAS-NVFVGSALLDLYVKLSTIEEAQKAFGDTQHP 176
++ + ++RN G A + S +V +A++ Y++ +EEA+ FGD
Sbjct: 175 LV--TGLIRN---GDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK 229
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
NVV++T++V GY + G +A ++F EMPERN+VSW AM+ G + EA+ F++M
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK 289
Query: 237 R--EGFIPTESTFPSVITAAAKIAA--LGMGKRFHACAIKCLGKL---DVFVGNSLISFY 289
+ + P T S+ A + +G++ HA I + D + SL+ Y
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 290 AKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
A G + + + N+ ++ SCN ++ Y +NG
Sbjct: 350 ASSGLIASAQSLLNESF--DLQSCNIIINRYLKNG 382
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 29/186 (15%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F ++ D G + T +I G + +A L S M+ ++P T+ +L S+ N
Sbjct: 422 LFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ G+ +H K +A D P+++ +LV
Sbjct: 482 LDQGKHIHCVIAKT---------TACYD--------------------PDLILQNSLVSM 512
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y K G EDA ++F +M +++ VSWN+M+ G S G ++A+N F +ML G P TF
Sbjct: 513 YAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTF 572
Query: 248 PSVITA 253
V++A
Sbjct: 573 LGVLSA 578
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 32/260 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML-ASKIRPNEFTFGTVLHSST 123
A ++F ++S+ S ++ G+AK+ ++A+ L+ RML ++P+ +TF VL +
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG 207
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
+ ++ G+++H + G ++ V +AL+ +YVK
Sbjct: 208 GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK------------------------ 243
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
CG +K R +F MP R+++SWNAM+ G + G E + F M P
Sbjct: 244 --CGDVKSARL-----LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
T SVI+A + +G+ HA I +D+ V NSL Y GS ++ +F+
Sbjct: 297 LMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS 356
Query: 304 KLLKRNIVSCNAVVCGYAQN 323
++ +++IVS ++ GY N
Sbjct: 357 RMERKDIVSWTTMISGYEYN 376
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 103/190 (54%), Gaps = 7/190 (3%)
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQK----AFGDTQHPNVVSYTALVCGYLKRGRFE 195
++ + +VFV AL+ L EE K A V A + +++ G
Sbjct: 89 RVAVDEDVFV--ALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLV 146
Query: 196 DALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITAA 254
DA VF +M ERN+ SWN +VGG ++ G+ +EA+ + ML G + P TFP V+
Sbjct: 147 DAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTC 206
Query: 255 AKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCN 314
I L GK H ++ +LD+ V N+LI+ Y KCG ++ + L+F+++ +R+I+S N
Sbjct: 207 GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWN 266
Query: 315 AVVCGYAQNG 324
A++ GY +NG
Sbjct: 267 AMISGYFENG 276
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 33/270 (12%)
Query: 57 LDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFG 116
L+ +++ A +F + S TT+I G+ + AI + M ++P+E T
Sbjct: 343 LNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVA 402
Query: 117 TVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP 176
VL + L ++ G +LH A K L S V V + L+++Y K I++A
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA---------- 452
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
L +FH +P +NV+SW +++ G EA+ F+ +
Sbjct: 453 ---------------------LDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQM 490
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
+ P T + + A A+I AL GK HA ++ LD F+ N+L+ Y +CG M
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+ FN K+++ S N ++ GY++ G+G
Sbjct: 551 TAWSQFNSQ-KKDVTSWNILLTGYSERGQG 579
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 34/297 (11%)
Query: 30 KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICG-FA 88
K VH H + + VV I Y + + A +FD + S +I G F
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMY-VKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 89 KRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVF 148
CHE + LF M + P+ T +V+ + +L + +GR +HA G A ++
Sbjct: 275 NGMCHE-GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 149 VGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERN 208
V ++L +Y+ + EA+K +F M ++
Sbjct: 334 VCNSLTQMYLNAGSWREAEK-------------------------------LFSRMERKD 362
Query: 209 VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHA 268
+VSW M+ G ++A++ + M ++ P E T +V++A A + L G H
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
Query: 269 CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
AIK V V N+LI+ Y+KC ++ +L +F+ + ++N++S +++ G N R
Sbjct: 423 LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 218 GCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKL 277
G G EEA+ M E F +++ A G + ++ A+ + L
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 278 DVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
V +GN+ ++ + + G++ D+ +F K+ +RN+ S N +V GYA+ G
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG 174
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 34/250 (13%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T+I F + ++ + L M + + T +L +++ LRN IG+Q HA
Sbjct: 386 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL 445
Query: 139 TKIGLASNVFVG--SALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFED 196
+ G+ F G S L+D+Y K I +QK F + GY
Sbjct: 446 IRQGIQ---FEGMNSYLIDMYSKSGLIRISQKLFEGS-------------GY-------- 481
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
ER+ +WN+M+ G +Q GH E+ F ML + P T S++ A ++
Sbjct: 482 --------AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQ 533
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
I ++ +GK+ H +I+ +VFV ++L+ Y+K G+++ + MF++ +RN V+ +
Sbjct: 534 IGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTM 593
Query: 317 VCGYAQNGRG 326
+ GY Q+G G
Sbjct: 594 ILGYGQHGMG 603
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 88/158 (55%), Gaps = 4/158 (2%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
++I G+ + E +F +ML IRPN T ++L + + + +V +G+QLH + +
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ 550
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF 201
L NVFV SAL+D+Y K I+ A+ F T+ N V+YT ++ GY + G E A+ +F
Sbjct: 551 YLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLF 610
Query: 202 HEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDM 235
M E + +++ A++ CS +G +E + F +M
Sbjct: 611 LSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 123/268 (45%), Gaps = 30/268 (11%)
Query: 58 DPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
D + V +FD + + T+I + K + +A F M+ +++P+ +F
Sbjct: 160 DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVN 219
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN 177
V + ++ R++ +NVF G L +KL GD +
Sbjct: 220 VFPAVSISRSIK--------------KANVFYG-----LMLKL----------GDEYVKD 250
Query: 178 VVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML- 236
+ ++ + Y + G E + +VF ERN+ WN M+G Q E++ F++ +
Sbjct: 251 LFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIG 310
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
+ + E T+ +A + + + +G++FH K +L + + NSL+ Y++CGS+
Sbjct: 311 SKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVH 370
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
S +F + +R++VS N ++ + QNG
Sbjct: 371 KSFGVFLSMRERDVVSWNTMISAFVQNG 398
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 35/261 (13%)
Query: 67 HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK-IRPNEFTFGTVLHSSTVL 125
+FD + E T+I + + C ++I LF + SK I +E T+ + + L
Sbjct: 272 RVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 126 RNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALV 185
+ V +GRQ H +K + + ++L+ +Y + ++ K+FG
Sbjct: 332 QQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSV---HKSFG-------------- 374
Query: 186 CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
VF M ER+VVSWN M+ Q G ++E + +M ++GF
Sbjct: 375 --------------VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYI 420
Query: 246 TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF--N 303
T ++++AA+ + +GK+ HA I+ + + + + LI Y+K G + S +F +
Sbjct: 421 TVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGS 479
Query: 304 KLLKRNIVSCNAVVCGYAQNG 324
+R+ + N+++ GY QNG
Sbjct: 480 GYAERDQATWNSMISGYTQNG 500
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 47/274 (17%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRP----NEFTFGTV 118
Q+A +FD I T TII GF + +A+ +SRM K P + +T+ +
Sbjct: 56 QLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKTAPFTNCDAYTYSST 113
Query: 119 LHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEE------AQKAFGD 172
L + +N+ G+ +H + S+ V ++L+++YV + +K F +
Sbjct: 114 LKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDN 173
Query: 173 TQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFF 232
+ NVV++ L+ Y+K TG N EA F
Sbjct: 174 MRRKNVVAWNTLISWYVK-------------------------------TGRNAEACRQF 202
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGK---LDVFVGNSLISFY 289
M+R P+ +F +V A + ++ F+ +K LG D+FV +S IS Y
Sbjct: 203 GIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLK-LGDEYVKDLFVVSSAISMY 261
Query: 290 AKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
A+ G +E S +F+ ++RNI N ++ Y QN
Sbjct: 262 AELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 174 QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGG--CSQTGHNEEAVNF 231
Q P++ S + +C + G + A Q+F +P+ V WN ++ G C+ H EA+ F
Sbjct: 38 QTPSIRSRLSKIC---QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPH--EALLF 92
Query: 232 FIDMLREG-FIPTES-TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFY 289
+ M + F ++ T+ S + A A+ L GK H I+CL V NSL++ Y
Sbjct: 93 YSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY 152
Query: 290 AKCGSMEDSL------LMFNKLLKRNIVSCNAVVCGYAQNGR 325
C + D +F+ + ++N+V+ N ++ Y + GR
Sbjct: 153 VSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGR 194
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 30/267 (11%)
Query: 60 TTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL 119
+ A +F I D T+I G+ E+A+ ++ M+ P+ FT+ +L
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
+ T L+++ G+Q+H K+GL ++VFV ++L+++Y + +E + F +
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG 239
S++++V G + + L +F G CS+T E
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFR--------------GMCSETNLKAE------------ 233
Query: 240 FIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSL 299
ES S + A A AL +G H ++ + +L++ V SL+ Y KCG ++ +L
Sbjct: 234 ----ESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKAL 289
Query: 300 LMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+F K+ KRN ++ +A++ G A +G G
Sbjct: 290 HIFQKMEKRNNLTYSAMISGLALHGEG 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A +F + + +N M+ G EEA+ F+ +M++ G P T+P ++ A +
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
+ ++ GK+ H K + DVFV NSLI+ Y +CG ME S +F KL + S +++
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 317 VCGYAQNGRGGFTSWA 332
V + R G W+
Sbjct: 205 V-----SARAGMGMWS 215
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
N++ T+LV Y+K G + AL +F +M +RN ++++AM+ G + G E A+ F M+
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN--SLISFYAKCGS 294
+EG P + SV+ A + + G+R A +K GK++ + L+ + G
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLK-EGKVEPTAEHYGCLVDLLGRAGL 386
Query: 295 MEDSL 299
+E++L
Sbjct: 387 LEEAL 391
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 7/237 (2%)
Query: 30 KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAK 89
K +H L + + VQ +I +++ +F+++ T S ++++ A
Sbjct: 152 KQIHGQVFKLGLE-ADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAG 210
Query: 90 RHCHEDAIHLFSRMLA-SKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVF 148
+ + LF M + + ++ E + L + + +G +H + N+
Sbjct: 211 MGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNII 270
Query: 149 VGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM---- 204
V ++L+D+YVK +++A F + N ++Y+A++ G G E AL++F +M
Sbjct: 271 VQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEG 330
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIAAL 260
E + V + +++ CS +G +E F +ML+EG + PT + ++ + L
Sbjct: 331 LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 128/261 (49%), Gaps = 32/261 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM-LASKIRPNEFTFGTVLHSST 123
A MFDE+ + ++++ GF K A+ F RM +AS + P+ T T++ + T
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
L N +GR +H + G ++++ + ++LL+ Y K
Sbjct: 175 KLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA--------------------- 213
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
F++A+ +F + E++V+SW+ ++ Q G EA+ F DM+ +G P
Sbjct: 214 ----------FKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPN 263
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
+T V+ A A L G++ H AI+ + +V V +L+ Y KC S E++ +F+
Sbjct: 264 VATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS 323
Query: 304 KLLKRNIVSCNAVVCGYAQNG 324
++ ++++VS A++ G+ NG
Sbjct: 324 RIPRKDVVSWVALISGFTLNG 344
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 130/262 (49%), Gaps = 33/262 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A MF E++ + T++ ++ E+ ++ FS M + +P+ FT L +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 125 LRNVVIGRQLHACATK-IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
LR V G +H K + L S+++VGS+L+ +Y+K
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIK------------------------ 108
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-P 242
CG R +AL++F E+ + ++V+W++MV G + G +AV FF M+ + P
Sbjct: 109 --CG-----RMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP 161
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
T ++++A K++ +G+ H I+ D+ + NSL++ YAK + ++++ +F
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 303 NKLLKRNIVSCNAVVCGYAQNG 324
+ +++++S + V+ Y QNG
Sbjct: 222 KMIAEKDVISWSTVIACYVQNG 243
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 40/270 (14%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F+ A ++F I++ S +T+I + + +A+ +F+ M+ PN T VL +
Sbjct: 214 FKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQA 273
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
++ GR+ H A + GL + V V +AL+D+Y+K + EEA F +VVS+
Sbjct: 274 CAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSW 333
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAM-----VGGCSQTGHNEEAVNFFIDML 236
AL+ G+ G +++ F M N +A+ +G CS+ G E+A
Sbjct: 334 VALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA-------- 385
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
K FH+ IK + F+G SL+ Y++CGS+
Sbjct: 386 ---------------------------KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLG 418
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
++ +FN + ++ V +++ GY +G+G
Sbjct: 419 NASKVFNGIALKDTVVWTSLITGYGIHGKG 448
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 196 DALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAA 255
DA Q+F EM +R++ WN ++ S+ EE + F M R+ P T P + A
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 256 KIAALGMGKRFHACAIK--CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSC 313
++ + G+ H K LG D++VG+SLI Y KCG M ++L MF++L K +IV+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGS-DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 314 NAVVCGYAQNG 324
+++V G+ +NG
Sbjct: 131 SSMVSGFEKNG 141
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 127/264 (48%), Gaps = 34/264 (12%)
Query: 63 QVACHMFDEIS--DLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
++A H+FDEI + + +I +A E A+ L+ +ML S +RP ++T+ VL
Sbjct: 52 ELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLK 111
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
+ LR + G+ +H+ A++++V +AL+D Y K
Sbjct: 112 ACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAK--------------------- 150
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR-EG 239
CG L E A++VF EMP+R++V+WNAM+ G S + + F+DM R +G
Sbjct: 151 -----CGEL-----EMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDG 200
Query: 240 FIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSL 299
P ST + A + AL GK H + D+ V ++ YAK + +
Sbjct: 201 LSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYAR 260
Query: 300 LMFNKLLKRNIVSCNAVVCGYAQN 323
+F+ K+N V+ +A++ GY +N
Sbjct: 261 RVFDLDFKKNEVTWSAMIGGYVEN 284
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML-ASKIRPNEFTFGTV-- 118
++A +FDE+ + +I GF+ C D I LF M + PN T +
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 119 -LHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN 177
L + LR G+ +H T++G ++++ V + +LD+Y K I A++ F N
Sbjct: 214 ALGRAGALRE---GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 178 VVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
V+++A++ GY++ ++A +VF +M + V AMV
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV---AMV--------------------- 306
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMED 297
T ++ A+ L G+ H A+K LD+ V N++ISFYAK GS+ D
Sbjct: 307 -----TPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCD 361
Query: 298 SLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+ F+++ ++++S N+++ G N R
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCR 389
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 37/250 (14%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASK----IRPNEFTFGTVLHSSTVLRNVVIGRQLHA 136
+ +I G+ + ++A +F +ML + + P G +L ++ GR +H
Sbjct: 275 SAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHC 332
Query: 137 CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFED 196
A K G +LDL V+ ++S+ Y K G D
Sbjct: 333 YAVKAGF---------ILDLTVQ----------------NTIISF------YAKYGSLCD 361
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A + F E+ ++V+S+N+++ GC EE+ F +M G P +T V+TA +
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSH 421
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
+AALG G H + ++ + N+L+ Y KCG ++ + +F+ + KR+IVS N +
Sbjct: 422 LAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTM 481
Query: 317 VCGYAQNGRG 326
+ G+ +G G
Sbjct: 482 LFGFGIHGLG 491
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 6/204 (2%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
+ VQ II + + A F EI S ++I G E++ LF M
Sbjct: 342 DLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR 401
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
S IRP+ T VL + + L + G H G A N + +AL+D+Y K ++
Sbjct: 402 TSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLD 461
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCS 220
A++ F ++VS+ ++ G+ G ++AL +F+ M E V V+ A++ CS
Sbjct: 462 VAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACS 521
Query: 221 QTGHNEEAVNFFIDMLREGF--IP 242
+G +E F M R F IP
Sbjct: 522 HSGLVDEGKQLFNSMSRGDFNVIP 545
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 3/249 (1%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRP-NEFTFGTVLHSSTVLRNVVIGRQLHAC 137
S T + +A + HE A++LF +M +S P + F L S V+G +HA
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDA 197
+ K SN FVG ALLD+Y K ++ A+K F + N V + A++ Y G+ ++A
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEA 133
Query: 198 LQVFHEMP-ERNVVSWNAMVGGCSQTGHNE-EAVNFFIDMLREGFIPTESTFPSVITAAA 255
++++ M N S+NA++ G T A+ F+ M+ F P T ++++A +
Sbjct: 134 VELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACS 193
Query: 256 KIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNA 315
I A + K H+ A + L + + + L+ Y +CGS+ L+F+ + R++V+ ++
Sbjct: 194 AIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSS 253
Query: 316 VVCGYAQNG 324
++ YA +G
Sbjct: 254 LISAYALHG 262
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 43 HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESA-TTIICGFAKRHCHED----AI 97
N VV +I + + A +++ + + ES+ II G ED AI
Sbjct: 111 QRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGT---EDGSYRAI 167
Query: 98 HLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLY 157
+ +M+ + +PN T ++ + + + + +++H+ A + + + + S L++ Y
Sbjct: 168 EFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAY 227
Query: 158 VKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV----VSWN 213
+ +I Q F + +VV++++L+ Y G E AL+ F EM V +++
Sbjct: 228 GRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFL 287
Query: 214 AMVGGCSQTGHNEEAVNFFIDM 235
++ CS G +EA+ +F M
Sbjct: 288 NVLKACSHAGLADEALVYFKRM 309
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES-TFPSVITAAAKIAALGMGKRF 266
++S + + G++E+A+N F+ M +P ++ F + + A +G
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 267 HACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
HA ++K + FVG +L+ Y KC S+ + +F+++ +RN V NA++ Y G+
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 32/282 (11%)
Query: 44 ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM 103
+N VVQ ++ + A +FD +++ + T+I G K ED + F M
Sbjct: 232 DNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNM 291
Query: 104 LASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTI 163
L S + P +FT+ VL+ + L + +G+ +HA +++ + +ALLD+Y +
Sbjct: 292 LMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDM 351
Query: 164 EEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTG 223
EA FG +P N+VSWN+++ GCS+ G
Sbjct: 352 REAFYVFGRIHNP-------------------------------NLVSWNSIISGCSENG 380
Query: 224 HNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
E+A+ + +LR P E TF + I+A A+ GK H K + VFVG
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 283 NSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+L+S Y K E + +F+ + +R++V ++ G+++ G
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLG 482
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 31/231 (13%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A L + M ++PN TF +++ VL +V++G L++ K+G + NV V +++L
Sbjct: 183 AFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLG 242
Query: 156 LYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAM 215
+Y CG L E A ++F + R+ V+WN M
Sbjct: 243 MYSS--------------------------CGDL-----ESARRIFDCVNNRDAVAWNTM 271
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG 275
+ G + E+ + FF +ML G PT+ T+ V+ +K+ + +GK HA I
Sbjct: 272 IVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDS 331
Query: 276 KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
D+ + N+L+ Y CG M ++ +F ++ N+VS N+++ G ++NG G
Sbjct: 332 LADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 41/292 (14%)
Query: 43 HENTVVQKDIIPYGLDPTTFQVAC---------HMFDEISDLTGESATTIICGFAKRHCH 93
H +V + LD + C ++F I + S +II G ++
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 94 EDAIHLFSRML-ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSA 152
E A+ ++ R+L S RP+E+TF + ++ V G+ LH TK+G +VFVG+
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTT 442
Query: 153 LLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSW 212
LL +Y K E AQK F + +VV +T ++ G+ + G E A+Q
Sbjct: 443 LLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQ------------- 489
Query: 213 NAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
FFI+M RE + SVI A + +A L G+ FH AI+
Sbjct: 490 ------------------FFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIR 531
Query: 273 CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ V +L+ Y K G E + +F+ ++ N+++ Y+Q+G
Sbjct: 532 TGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHG 583
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 28/251 (11%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVF----- 148
E A +F +M I T+ S V V +G LH+ K+G +F
Sbjct: 39 EQARKVFDKMPQRNIV-------TLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPLN 91
Query: 149 -VGSALLDLY---VKLSTIEEAQK---------AFGDTQHPNVVSYTALVCGYLKRGRFE 195
+ S++++L V ++ ++ A++ A T+ P + L+ Y++ G E
Sbjct: 92 EIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESP--YANNNLISMYVRCGSLE 149
Query: 196 DALQVFHEMPERNVVSWNAMVGGCSQT-GHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
A +VF +MP RNVVS+NA+ S+ A M E P STF S++
Sbjct: 150 QARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVC 209
Query: 255 AKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCN 314
A + + MG ++ IK +V V S++ Y+ CG +E + +F+ + R+ V+ N
Sbjct: 210 AVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWN 269
Query: 315 AVVCGYAQNGR 325
++ G +N +
Sbjct: 270 TMIVGSLKNDK 280
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 31/202 (15%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
+ A +FD + + T +I G ++ E A+ F M K R + F+ +V+ +
Sbjct: 454 ESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
+ + + G H A + G + V AL+D+Y K
Sbjct: 514 SDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGK----------------------- 550
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
G++E A +F ++ WN+M+G SQ G E+A++FF +L GF+P
Sbjct: 551 --------NGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMP 602
Query: 243 TESTFPSVITAAAKIAALGMGK 264
T+ S++ A + + GK
Sbjct: 603 DAVTYLSLLAACSHRGSTLQGK 624
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG---- 239
L+ Y++ E A +VF +MP+RN+V+ + G + + + +++ G
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVT---LFGLSAVFEYVSMGSSLHSQIIKLGSFQM 84
Query: 240 --FIPTESTFPSVITAAAK---IAALGMGKRFHACAIKC---LGKLDVFVGNSLISFYAK 291
F+P SV+ K I L ++ HA + + N+LIS Y +
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 292 CGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFTSWA 332
CGS+E + +F+K+ RN+VS NA+ Y++N F S+A
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRN--PDFASYA 183
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 31/202 (15%)
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ +V +G +H+ + G S ++V ++LL LY + A K
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYK---------------- 44
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
VF +MPE+++V+WN+++ G ++ G EEA+ + +M +G P
Sbjct: 45 ---------------VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDG 89
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T S+++A AKI AL +GKR H IK ++ N L+ YA+CG +E++ +F++
Sbjct: 90 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE 149
Query: 305 LLKRNIVSCNAVVCGYAQNGRG 326
++ +N VS +++ G A NG G
Sbjct: 150 MVDKNSVSWTSLIVGLAVNGFG 171
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD++ + + ++I GFA+ E+A+ L++ M + I+P+ FT ++L +
Sbjct: 42 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 101
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ + +G+++H K+GL N+ + LLDLY + +EEA+ F + N VS+T+L
Sbjct: 102 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 161
Query: 185 VCGYLKRGRFEDALQVFHEMPERN-----VVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
+ G G ++A+++F M +++ ++ CS G +E +F M E
Sbjct: 162 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 220
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T++ + +A+ M+ + P+EFT +VL + + L + G++LHA A K
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 141 IG-LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQ 199
G L N FVGSAL+D+Y C + GR +
Sbjct: 331 NGSLDENSFVGSALVDMYCN--------------------------CKQVLSGR-----R 359
Query: 200 VFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITAAAKIA 258
VF M +R + WNAM+ G SQ H++EA+ FI M G + +T V+ A +
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
A + H +K D FV N+L+ Y++ G ++ ++ +F K+ R++V+ N ++
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 319 GY 320
GY
Sbjct: 480 GY 481
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 140/302 (46%), Gaps = 29/302 (9%)
Query: 30 KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAK 89
K +H + + EN+ V ++ + +FD + D +I G+++
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 381
Query: 90 RHCHEDAIHLFSRMLASK-IRPNEFTFGTVLHSSTVLRNVVIGRQ--LHACATKIGLASN 146
++A+ LF M S + N T V+ +R+ R+ +H K GL +
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVV--PACVRSGAFSRKEAIHGFVVKRGLDRD 439
Query: 147 VFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP- 205
FV + L+D+Y +L I+ A + FG + ++V++ ++ GY+ EDAL + H+M
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 206 -ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
ER V G S R P T +++ + A ++AL GK
Sbjct: 500 LERKVSK------GAS----------------RVSLKPNSITLMTILPSCAALSALAKGK 537
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
HA AIK DV VG++L+ YAKCG ++ S +F+++ ++N+++ N ++ Y +G
Sbjct: 538 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 597
Query: 325 RG 326
G
Sbjct: 598 NG 599
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 38/301 (12%)
Query: 28 ITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGF 87
+ K +H H + ++ V ++ F +FD IS+ S ++I
Sbjct: 115 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL 174
Query: 88 AKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVL---RNVVIGRQLHACATKIGLA 144
E A+ F ML + P+ FT +V+ + + L +++G+Q+HA + G
Sbjct: 175 CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-E 233
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
N F+ + L+ +Y KL + ++ G S+
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLG--------SFGG--------------------- 264
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
R++V+WN ++ Q EA+ + +M+ EG P E T SV+ A + + L GK
Sbjct: 265 --RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 265 RFHACAIKCLGKLD--VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
HA A+K G LD FVG++L+ Y C + +F+ + R I NA++ GY+Q
Sbjct: 323 ELHAYALKN-GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 381
Query: 323 N 323
N
Sbjct: 382 N 382
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 36/233 (15%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA-SNVFVGSAL 153
+A+ + M+ I+P+ + F +L + L+++ +G+Q+HA K G +V V + L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
++LY K C G F +VF + ERN VSWN
Sbjct: 140 VNLYRK--------------------------C-----GDFGAVYKVFDRISERNQVSWN 168
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA---ALGMGKRFHACA 270
+++ E A+ F ML E P+ T SV+TA + + L MGK+ HA
Sbjct: 169 SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYG 228
Query: 271 IKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
++ G+L+ F+ N+L++ Y K G + S ++ R++V+ N V+ QN
Sbjct: 229 LR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 16/206 (7%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML---------ASKI--RP 110
+A +F ++ D + T+I G+ HEDA+ L +M AS++ +P
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 111 NEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF 170
N T T+L S L + G+++HA A K LA++V VGSAL+D+Y K ++ ++K F
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM----PERNVVSWNAMVGGCSQTGHNE 226
NV+++ ++ Y G ++A+ + M + N V++ ++ CS +G +
Sbjct: 576 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 227 EAVNFFIDMLRE-GFIPTESTFPSVI 251
E + F M + G P+ + V+
Sbjct: 636 EGLRIFYVMKPDYGVEPSSDHYACVV 661
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 33/262 (12%)
Query: 64 VACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSS 122
+A +FDEI + +I G A +A+ LF M++ KI PN T+L
Sbjct: 267 LARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVL 326
Query: 123 TVLRNVVIGRQLHACATK-IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
++ + +G+++HA K FV S L+DLY K
Sbjct: 327 GDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCK---------------------- 364
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
CG + GR +VF+ +RN +SW A++ G + G ++A+ + M +EGF
Sbjct: 365 ----CGDMASGR-----RVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFR 415
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P T +V+ A++ A+ GK H A+K L +V + SL+ Y+KCG E + +
Sbjct: 416 PDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRL 475
Query: 302 FNKLLKRNIVSCNAVVCGYAQN 323
F++L +RN+ + A++ Y +N
Sbjct: 476 FDRLEQRNVKAWTAMIDCYVEN 497
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 35/265 (13%)
Query: 65 ACHMFDEISDLTGESATTIICG--FAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
A +FDE + S ++ G + + ++D + F+ M + N ++ V S
Sbjct: 165 AQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSF 224
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
+ G + HA A K GL ++VF+ ++L+D+Y K
Sbjct: 225 AGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFK----------------------- 261
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI- 241
CG + R +VF E+ ER++V W AM+ G + EA+ F M+ E I
Sbjct: 262 ---CGKVGLAR-----RVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIY 313
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLD-VFVGNSLISFYAKCGSMEDSLL 300
P +++ + AL +GK HA +K ++ FV + LI Y KCG M
Sbjct: 314 PNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRR 373
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNGR 325
+F +RN +S A++ GYA NGR
Sbjct: 374 VFYGSKQRNAISWTALMSGYAANGR 398
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 37/252 (14%)
Query: 87 FAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN 146
FA+++ E A+ + + I N TF +L + ++++ G+Q+H GL SN
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 147 VFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRG--RFEDALQVFHEM 204
F+ + L+ +Y ++++AQK F ++ NV S+ AL+ G + G R++D L F EM
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM 205
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
E V +N + + +V + A +AL G
Sbjct: 206 RELGV------------------DLNVY-------------SLSNVFKSFAGASALRQGL 234
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ HA AIK VF+ SL+ Y KCG + + +F+++++R+IV A++ G A N
Sbjct: 235 KTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNK 294
Query: 325 RGGFTSWATLGL 336
R W LGL
Sbjct: 295 R----QWEALGL 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 67 HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLR 126
+FD + ++ T +I + + I +F ML SK RP+ T G VL + L+
Sbjct: 474 RLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLK 533
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ +G++LH K S FV + ++ +Y K + A +F +++TA++
Sbjct: 534 ALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIE 593
Query: 187 GYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLR-EGFI 241
Y F DA+ F +M R N ++ A++ CSQ G +EA FF MLR
Sbjct: 594 AYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQ 653
Query: 242 PTESTFPSVI 251
P+E + VI
Sbjct: 654 PSEEHYSLVI 663
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T ++ G+A + A+ M RP+ T TVL LR + G+++H A
Sbjct: 385 SWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYA 444
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K N+F+ PNV T+L+ Y K G E +
Sbjct: 445 LK-----NLFL--------------------------PNVSLVTSLMVMYSKCGVPEYPI 473
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
++F + +RNV +W AM+ + + F ML P T V+T + +
Sbjct: 474 RLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLK 533
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
AL +GK H +K + FV +I Y KCG + + F+ + + ++ A++
Sbjct: 534 ALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIE 593
Query: 319 GYAQN 323
Y N
Sbjct: 594 AYGCN 598
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 31/258 (12%)
Query: 67 HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLR 126
+F++I+ S T +I + + E A+ FS M+ S I PN T +VL S ++
Sbjct: 258 RIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIG 317
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ G+ +H A + L N Y LS ALV
Sbjct: 318 LIREGKSVHGFAVRRELDPN----------YESLSL--------------------ALVE 347
Query: 187 GYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTEST 246
Y + G+ D V + +RN+V+WN+++ + G +A+ F M+ + P T
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 247 FPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
S I+A + +GK+ H I+ D FV NSLI Y+K GS++ + +FN++
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRT-DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 307 KRNIVSCNAVVCGYAQNG 324
R++V+ N+++CG++QNG
Sbjct: 467 HRSVVTWNSMLCGFSQNG 484
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 35/243 (14%)
Query: 91 HCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN-VVIGRQLHACATKIGLASNVFV 149
H + AI L+ R+++ + ++F F +VL + R + +G ++H K G+ + +
Sbjct: 79 HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVI 138
Query: 150 GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
T+L+C Y + G DA +VF MP R++
Sbjct: 139 -------------------------------ETSLLCMYGQTGNLSDAEKVFDGMPVRDL 167
Query: 210 VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHAC 269
V+W+ +V C + G +A+ F M+ +G P T SV+ A++ L + + H
Sbjct: 168 VAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQ 227
Query: 270 AIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFT 329
+ + LD + NSL++ Y+KCG + S +F K+ K+N VS A++ Y RG F+
Sbjct: 228 ITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY---NRGEFS 284
Query: 330 SWA 332
A
Sbjct: 285 EKA 287
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 33/256 (12%)
Query: 72 ISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIG 131
+SD + ++I +A R A+ LF +M+ +I+P+ FT + + + V +G
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKR 191
+Q+H + + S+ FV ++L+D+Y K +++ A
Sbjct: 425 KQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSAS------------------------ 459
Query: 192 GRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
VF+++ R+VV+WN+M+ G SQ G++ EA++ F M E TF +VI
Sbjct: 460 -------TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVI 512
Query: 252 TAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
A + I +L GK H I G D+F +LI YAKCG + + +F + R+IV
Sbjct: 513 QACSSIGSLEKGKWVHHKLIIS-GLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 312 SCNAVVCGYAQNGRGG 327
S ++++ Y +GR G
Sbjct: 572 SWSSMINAYGMHGRIG 587
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A+ +F M+ + P+ T +V+ L + I R +H T+ + + ++LL
Sbjct: 186 ALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLT 245
Query: 156 LYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAM 215
+Y K CG L ++F ++ ++N VSW AM
Sbjct: 246 MYSK--------------------------CGDLLSSE-----RIFEKIAKKNAVSWTAM 274
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG 275
+ ++ +E+A+ F +M++ G P T SV+++ I + GK H A++
Sbjct: 275 ISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR--R 332
Query: 276 KLDV---FVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+LD + +L+ YA+CG + D + + RNIV+ N+++ YA G
Sbjct: 333 ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 5/237 (2%)
Query: 33 HTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHC 92
H H + T + VQ +I + A +F++I + + +++CGF++
Sbjct: 426 QIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 93 HEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSA 152
+AI LF M S + NE TF V+ + + + ++ G+ +H GL ++F +A
Sbjct: 486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTA 544
Query: 153 LLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----N 208
L+D+Y K + A+ F ++VS+++++ Y GR A+ F++M E N
Sbjct: 545 LIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPN 604
Query: 209 VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
V + ++ C +G EE +F M G P F I ++ L R
Sbjct: 605 EVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYR 661
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 36/261 (13%)
Query: 70 DEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVV 129
DE+ D S ++I + + A+ L+ M+ + + FT +VL++ T L +++
Sbjct: 200 DELRDEV--SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257
Query: 130 IGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE---EAQKAFGDTQHPNVVSYTALVC 186
GRQ H K G N VGS L+D Y K + +++K F + P++V + ++
Sbjct: 258 GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMIS 317
Query: 187 GYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTEST 246
GY S N + +EEAV F M R G P + +
Sbjct: 318 GY----------------------SMNEEL--------SEEAVKSFRQMQRIGHRPDDCS 347
Query: 247 FPSVITAAAKIAALGMGKRFHACAIKC-LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
F V +A + +++ K+ H AIK + + V N+LIS Y K G+++D+ +F+++
Sbjct: 348 FVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRM 407
Query: 306 LKRNIVSCNAVVCGYAQNGRG 326
+ N VS N ++ GYAQ+G G
Sbjct: 408 PELNAVSFNCMIKGYAQHGHG 428
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 8/222 (3%)
Query: 110 PNEF-TFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQK 168
P +F TF +L S R++ G+ LHA K +AS+ ++ + ++LY K + A+
Sbjct: 5 PWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARA 64
Query: 169 AFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEA 228
AF T+ PNV SY +V Y K + A Q+F E+P+ + VS+N ++ G + A
Sbjct: 65 AFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAA 124
Query: 229 VNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVF--VGNSLI 286
+ F M + GF T +I A + + K+ H ++ G D + V N+ +
Sbjct: 125 MVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVS--GGFDSYSSVNNAFV 180
Query: 287 SFYAKCGSMEDSLLMFNKLLK-RNIVSCNAVVCGYAQNGRGG 327
++Y+K G + +++ +F + + R+ VS N+++ Y Q+ G
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGA 222
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 123/288 (42%), Gaps = 37/288 (12%)
Query: 40 ATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHL 99
+T+ N I+ + +A +FDEI S T+I G+A A+ L
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 100 FSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVK 159
F RM + FT ++ + V + +QLH + G S V +A
Sbjct: 128 FKRMRKLGFEVDGFTLSGLI--AACCDRVDLIKQLHCFSVSGGFDSYSSVNNAF------ 179
Query: 160 LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPE-RNVVSWNAMVGG 218
V+Y Y K G +A+ VF+ M E R+ VSWN+M+
Sbjct: 180 -------------------VTY------YSKGGLLREAVSVFYGMDELRDEVSWNSMIVA 214
Query: 219 CSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLD 278
Q +A+ + +M+ +GF T SV+ A + L G++FH IK +
Sbjct: 215 YGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN 274
Query: 279 VFVGNSLISFYAKCG---SMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
VG+ LI FY+KCG M DS +F ++L ++V N ++ GY+ N
Sbjct: 275 SHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMN 322
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 33/188 (17%)
Query: 81 TTIICGFA-KRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACAT 139
T+I G++ E+A+ F +M RP++ +F V + + L + +Q+H A
Sbjct: 313 NTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAI 372
Query: 140 KIGLASN-VFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
K + SN + V +AL+ LY K G +DA
Sbjct: 373 KSHIPSNRISVNNALISLY-------------------------------YKSGNLQDAR 401
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
VF MPE N VS+N M+ G +Q GH EA+ + ML G P + TF +V++A A
Sbjct: 402 WVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCG 461
Query: 259 ALGMGKRF 266
+ G+ +
Sbjct: 462 KVDEGQEY 469
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 8/270 (2%)
Query: 57 LDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFG 116
+D A ++D + ++T +I G + ++A +F M N T+
Sbjct: 152 IDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWT 207
Query: 117 TVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP 176
T++ V + R+L + + V S LL Y IE+A++ F
Sbjct: 208 TMITGYRQNNRVDVARKLFEVMPE---KTEVSWTSMLLG-YTLSGRIEDAEEFFEVMPMK 263
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
V++ A++ G+ + G A +VF M +R+ +W M+ + G EA++ F M
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
++G P+ + S+++ A +A+L G++ HA ++C DV+V + L++ Y KCG +
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+ L+F++ ++I+ N+++ GYA +G G
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 164 EEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTG 223
+EA++ F + NVVS+ LV GY+K +A VF MPERNVVSW AMV G Q G
Sbjct: 65 KEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEG 124
Query: 224 HNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN 283
EA + F M + F +I A K + +K DV
Sbjct: 125 MVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKAR---KLYDMMPVK-----DVVAST 176
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
++I + G ++++ L+F+++ +RN+V+ ++ GY QN R
Sbjct: 177 NMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNR 218
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD + D + +I + ++ +A+ LF++M +RP+ + ++L
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L ++ GRQ+HA + +V+V S L+ +YVK + +A+ F +++ + ++
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 185 VCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
+ GY G E+AL++FHEMP N V+ A++ CS G EE + F M
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM 458
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 33/234 (14%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
+++ LF M PN FTF V + L +V +HA K S+VFVG+A +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNA 214
D++VK ++++ A K VF MPER+ +WNA
Sbjct: 95 DMFVKCNSVDYAAK-------------------------------VFERMPERDATTWNA 123
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCL 274
M+ G Q+GH ++A + F +M P T ++I +A+ +L + + HA I+
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 275 GKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK--RNIVSCNAVVCGYAQNGRG 326
+ V V N+ IS Y KCG ++ + L+F + + R +VS N++ Y+ G
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA 237
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 134/333 (40%), Gaps = 73/333 (21%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +F+ + + + ++ GF + + A LF M ++I P+ T T++ S++
Sbjct: 106 AAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF 165
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLD----------------------------- 155
+++ + +HA ++G+ V V + +
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWN 225
Query: 156 -LYVKLSTIEEAQKAFG-------DTQHPNVVSYTALVCG-----YLKRGRF-------- 194
++ S EA AFG + P++ ++ L L +GR
Sbjct: 226 SMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHL 285
Query: 195 -------------------ED---ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFF 232
ED A +F M R VSW M+ G ++ G +EA+ F
Sbjct: 286 GTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALF 345
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACA-IKCLGKLDVFVGNSLISFYAK 291
M++ G P T S+I+ K +L GK A A I + +V + N+LI Y+K
Sbjct: 346 HAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSK 405
Query: 292 CGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
CGS+ ++ +F+ ++ +V+ ++ GYA NG
Sbjct: 406 CGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 438
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 6/208 (2%)
Query: 30 KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAK 89
+ +H+H L T + + I Y T A +FD ++ T S T +I G+A+
Sbjct: 276 RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS-ARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 90 RHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA-SNVF 148
+ ++A+ LF M+ S +P+ T +++ ++ G+ + A A G NV
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVM 394
Query: 149 VGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPE-- 206
+ +AL+D+Y K +I EA+ F +T VV++T ++ GY G F +AL++F +M +
Sbjct: 395 ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Query: 207 --RNVVSWNAMVGGCSQTGHNEEAVNFF 232
N +++ A++ C+ +G E+ +F
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYF 482
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%)
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFH 267
+V +WN + E++ F +M R GF P TFP V A A++A +G + H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 268 ACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
A IK DVFVG + + + KC S++ + +F ++ +R+ + NA++ G+ Q+G
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 132
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 110/199 (55%), Gaps = 5/199 (2%)
Query: 132 RQLHACATKIGL---ASNVFVGSALLDLYVKLSTIEEAQKAF-GDTQHPNVVSYTALVCG 187
+++H + K GL +G+ALLD Y K +E A K F G ++ +VSY +L+ G
Sbjct: 452 KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y+ G +DA +F EM ++ +W+ MV +++ EA+ F ++ G P T
Sbjct: 512 YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTI 571
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
+++ A++A+L + ++ H I+ G D+ + +L+ YAKCGS++ + +F +
Sbjct: 572 MNLLPVCAQLASLHLVRQCHGYIIRG-GLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDAR 630
Query: 308 RNIVSCNAVVCGYAQNGRG 326
R++V A+V GYA +GRG
Sbjct: 631 RDLVMFTAMVAGYAVHGRG 649
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 37/305 (12%)
Query: 27 YITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICG 86
Y K++H++ + + V + Y F A FD I+D S II G
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 87 FAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH-SSTVLRNVVI--GRQLHA-CATKIG 142
F++ + DA F ML PN T VL +++ +N+ GRQ+H+ +
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
L ++VFV ++L+ Y+++ GR E+A +F
Sbjct: 259 LQTHVFVCNSLVSFYLRV-------------------------------GRIEEAASLFT 287
Query: 203 EMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTFPSVITAAAKIAALG 261
M +++VSWN ++ G + +A F +++ +G + P T S++ A++ L
Sbjct: 288 RMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLA 347
Query: 262 MGKRFHACAIKCLGKL-DVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
GK H+ ++ L D VGN+LISFYA+ G + F+ + ++I+S NA++ +
Sbjct: 348 SGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAF 407
Query: 321 AQNGR 325
A + +
Sbjct: 408 ADSPK 412
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 38/262 (14%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM-LASKIRPNEFTFGTVLHSSTVLR 126
MF ++ L ++ G + C + + F M A + +P+ TF VL L
Sbjct: 78 MFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTI-EEAQKAFGDTQHPNVVSYTALV 185
+ G+ +H+ K GL + VG+AL+ +Y K I +A AF +VVS+ A++
Sbjct: 137 DSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 186 CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
G+ + DA + F C ML+E P +
Sbjct: 197 AGFSENNMMADAFRSF-----------------CL--------------MLKEPTEPNYA 225
Query: 246 TFPSVITAAA---KIAALGMGKRFHACAI-KCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
T +V+ A K A G++ H+ + + + VFV NSL+SFY + G +E++ +
Sbjct: 226 TIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASL 285
Query: 302 FNKLLKRNIVSCNAVVCGYAQN 323
F ++ +++VS N V+ GYA N
Sbjct: 286 FTRMGSKDLVSWNVVIAGYASN 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 68 MFDEIS--DLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVL 125
+F E+S DLT S I +A+ C +AI +F + A +RPN T +L L
Sbjct: 524 LFTEMSTTDLTTWSLMVRI--YAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQL 581
Query: 126 RNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALV 185
++ + RQ H + GL ++ + LLD+Y K +++ A F ++V +TA+V
Sbjct: 582 ASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMV 640
Query: 186 CGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLR--EG 239
GY GR ++AL ++ M E N+ V M+ C G ++ + + D +R G
Sbjct: 641 AGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY-DSIRTVHG 699
Query: 240 FIPTESTFPSVITAAAK 256
PT + + A+
Sbjct: 700 MKPTMEQYACAVDLIAR 716
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ 174
F V+ + + ++ GR LH C K+G + V ++L++Y K +++ QK
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQK------ 77
Query: 175 HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFID 234
+F +M + V WN ++ G S + E + FF
Sbjct: 78 -------------------------MFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKA 111
Query: 235 M-LREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCG 293
M + P+ TF V+ ++ GK H+ IK + D VGN+L+S YAK G
Sbjct: 112 MHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFG 171
Query: 294 SM-EDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
+ D+ F+ + +++VS NA++ G+++N
Sbjct: 172 FIFPDAYTAFDGIADKDVVSWNAIIAGFSEN 202
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 129/264 (48%), Gaps = 12/264 (4%)
Query: 67 HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM---LASKIRPNEFTFGTVLHSST 123
MFD + S ++I G+ K A LF M + + I N G S
Sbjct: 177 QMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD- 235
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
V I +L A + L S ++++D YVK IE+A+ F +VV++
Sbjct: 236 ---GVDIASKLFADMPEKDLIS----WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWAT 288
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG-FIP 242
++ GY K G A +F +MP R+VV++N+M+ G Q ++ EA+ F DM +E +P
Sbjct: 289 MIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLP 348
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
++T V+ A A++ L H ++ L +G +LI Y+KCGS++ ++L+F
Sbjct: 349 DDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVF 408
Query: 303 NKLLKRNIVSCNAVVCGYAQNGRG 326
+ ++I NA++ G A +G G
Sbjct: 409 EGIENKSIDHWNAMIGGLAIHGLG 432
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 109/216 (50%), Gaps = 11/216 (5%)
Query: 111 NEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF 170
++F+ VL + + L V G Q+H K GL S++F+ + L+ LY+K + +++ F
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP--ERNVVSWNAMVGGCSQTGHNEE- 227
+ VSY +++ GY+K G A ++F MP +N++SWN+M+ G +QT +
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 239
Query: 228 AVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLIS 287
A F DM + I S + A G+ + + DV ++I
Sbjct: 240 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL--------FDVMPRRDVVTWATMID 291
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
YAK G + + +F+++ R++V+ N+++ GY QN
Sbjct: 292 GYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQN 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%)
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI 271
WNA++ S +A+ ML G + + V+ A +++ + G + H
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
K D+F+ N LI Y KCG + S MF+++ KR+ VS N+++ GY + G
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 138/302 (45%), Gaps = 38/302 (12%)
Query: 26 RYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIIC 85
R+IT+ +H S + + +D+I A +FDE+ ++I
Sbjct: 31 RHITQ-IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIV 89
Query: 86 GFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH---SSTVLRNVVIGRQLHACATKIG 142
+++ ++ + L+ +M+A KI+P+ TF + S VL G + A G
Sbjct: 90 VYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEK---GEAVWCKAVDFG 146
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
++VFV S++L+LY+K G+ ++A +F
Sbjct: 147 YKNDVFVCSSVLNLYMKC-------------------------------GKMDEAEVLFG 175
Query: 203 EMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGM 262
+M +R+V+ W MV G +Q G + +AV F+ +M EGF ++ A+ + M
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 263 GKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
G+ H + ++V V SL+ YAK G +E + +F++++ + VS +++ G+AQ
Sbjct: 236 GRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 323 NG 324
NG
Sbjct: 296 NG 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 39/270 (14%)
Query: 64 VACHMFDEISDLTGESA-------TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFG 116
+ C DE L G+ A TT++ GFA+ A+ + M +
Sbjct: 162 MKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVML 221
Query: 117 TVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP 176
+L +S L + +GR +H + GL NV V ++L+D+
Sbjct: 222 GLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDM-------------------- 261
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
Y K G E A +VF M + VSW +++ G +Q G +A ++M
Sbjct: 262 -----------YAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
GF P T V+ A +++ +L G+ H C I LD +L+ Y+KCG++
Sbjct: 311 SLGFQPDLVTLVGVLVACSQVGSLKTGRLVH-CYILKRHVLDRVTATALMDMYSKCGALS 369
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
S +F + ++++V N ++ Y +G G
Sbjct: 370 SSREIFEHVGRKDLVCWNTMISCYGIHGNG 399
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 186 CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
CG + G A +VF E+P+R V +N+M+ S+ + +E + + M+ E P S
Sbjct: 60 CGRI--GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSS 117
Query: 246 TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
TF I A L G+ A+ K DVFV +S+++ Y KCG M+++ ++F K+
Sbjct: 118 TFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKM 177
Query: 306 LKRNIVSCNAVVCGYAQNGR 325
KR+++ +V G+AQ G+
Sbjct: 178 AKRDVICWTTMVTGFAQAGK 197
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 39/263 (14%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML 104
N VV+ ++ +VA +F + T S ++I GFA+ A M
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 105 ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
+ +P+ T VL + + + ++ GR +H K + V +AL+D+Y K
Sbjct: 311 SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSK----- 364
Query: 165 EAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGH 224
CG L R ++F + +++V WN M+ G+
Sbjct: 365 ---------------------CGALSSSR-----EIFEHVGRKDLVCWNTMISCYGIHGN 398
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNS 284
+E V+ F+ M P +TF S+++A + + G+ + + I K +
Sbjct: 399 GQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMIN---KYKIQPSEK 455
Query: 285 ----LISFYAKCGSMEDSLLMFN 303
LI A+ G +E++L M N
Sbjct: 456 HYVCLIDLLARAGRVEEALDMIN 478
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 116/232 (50%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
+ A+ + +L P+ +TF +++ V G+ H A K G + V ++L
Sbjct: 100 KQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSL 159
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
+ +Y ++ A+K F + ++VS+ +++ G ++ G A ++F EMP++N++SWN
Sbjct: 160 MHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWN 219
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC 273
M+ + +++ F +M+R GF EST ++ A + A L G+ HA I+
Sbjct: 220 IMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRT 279
Query: 274 LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
V + +LI Y KC + + +F+ L RN V+ N ++ + +GR
Sbjct: 280 FLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGR 331
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 39 LATKHENTVVQKDIIPY-----GLDPTTFQVACH-MFDEISDLTGESATTIICGFAKRHC 92
LA K + ++DI+ + G+ +A H +FDE+ D S +I + +
Sbjct: 171 LAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANN 230
Query: 93 HEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSA 152
+I LF M+ + + NE T +L++ + GR +HA + L S+V + +A
Sbjct: 231 PGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTA 290
Query: 153 LLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM------PE 206
L+D+Y K + A++ F N V++ ++ + GR E L++F M P+
Sbjct: 291 LIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPD 350
Query: 207 RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
V++ ++ GC++ G + +++ M+ E
Sbjct: 351 E--VTFVGVLCGCARAGLVSQGQSYYSLMVDE 380
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 33/239 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+I GF DA+ + M A+ I P+++TF ++L S + + +++H A K
Sbjct: 130 NALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFK 188
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGD-TQHPNVVSYTALVCGYLKRGRFEDALQ 199
+G S+ +VGS L+ Y K ++E+AQK F + + V + ALV GY + RFEDAL
Sbjct: 189 LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALL 248
Query: 200 VFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAA 259
VF +M E EG + T SV++A
Sbjct: 249 VFSKMRE-------------------------------EGVGVSRHTITSVLSAFTVSGD 277
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVC 318
+ G+ H A+K D+ V N+LI Y K +E++ +F + +R++ + N+V+C
Sbjct: 278 IDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC 336
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 122/267 (45%), Gaps = 38/267 (14%)
Query: 61 TFQVACHMFDEISDLTGESA-TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL 119
+ + A +FDE+ D ++ G+++ EDA+ +FS+M + + T +VL
Sbjct: 210 SVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVL 269
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
+ TV ++ GR +H A K G S++ V +AL+D+Y K +EEA
Sbjct: 270 SAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEAN------------ 317
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG 239
+F M ER++ +WN+++ G ++ + F ML G
Sbjct: 318 -------------------SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG 358
Query: 240 FIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKL-----DVFVGNSLISFYAKCGS 294
P T +V+ ++A+L G+ H I G L + F+ NSL+ Y KCG
Sbjct: 359 IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVS-GLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 295 MEDSLLMFNKLLKRNIVSCNAVVCGYA 321
+ D+ ++F+ + ++ S N ++ GY
Sbjct: 418 LRDARMVFDSMRVKDSASWNIMINGYG 444
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 108/265 (40%), Gaps = 54/265 (20%)
Query: 37 HSLATK---HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCH 93
H LA K + VV +I + A +F+ + + + +++C H
Sbjct: 285 HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDH 344
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGL----ASNVFV 149
+ + LF RML S IRP+ T TVL + L ++ GR++H GL +SN F+
Sbjct: 345 DGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI 404
Query: 150 GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
++L+D+YVK CG L+ DA VF M ++
Sbjct: 405 HNSLMDMYVK--------------------------CGDLR-----DARMVFDSMRVKDS 433
Query: 210 VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRF--- 266
SWN M+ G E A++ F M R G P E TF ++ A + L G+ F
Sbjct: 434 ASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQ 493
Query: 267 -------------HACAIKCLGKLD 278
+AC I LG+ D
Sbjct: 494 METVYNILPTSDHYACVIDMLGRAD 518
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
T+LV Y K G A+ VF ER+V +NA++ G G +A+ + +M G +
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P + TFPS++ + + L K+ H A K D +VG+ L++ Y+K S+ED+ +
Sbjct: 159 PDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 302 FNKLLKR-NIVSCNAVVCGYAQ 322
F++L R + V NA+V GY+Q
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQ 239
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FDEI D + + T + G+ H +AI LF +M+ ++P+ + VL + + +
Sbjct: 168 LFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD 227
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ G + ++ + N FV + L++LY K +E+A+ F ++V+++ ++ G
Sbjct: 228 LDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQG 287
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y + +E + F+ ML+E P + +
Sbjct: 288 Y-------------------------------ASNSFPKEGIELFLQMLQENLKPDQFSI 316
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
+++ A + AL +G+ + + ++F+ N+LI YAKCG+M +F ++ +
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376
Query: 308 RNIVSCNAVVCGYAQNG 324
++IV NA + G A+NG
Sbjct: 377 KDIVIMNAAISGLAKNG 393
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
++I GF H + + LF + + + FTF VL + T + +G LH+ K
Sbjct: 80 NSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVK 139
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G +V ++LL +Y + +A K F + +VV++TAL GY GR +A+ +
Sbjct: 140 CGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDL 199
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F +M E G P V++A + L
Sbjct: 200 FKKMVEM-------------------------------GVKPDSYFIVQVLSACVHVGDL 228
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
G+ + + + FV +L++ YAKCG ME + +F+ +++++IV+ + ++ GY
Sbjct: 229 DSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY 288
Query: 321 AQN 323
A N
Sbjct: 289 ASN 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 43 HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSR 102
+N+ V+ ++ + A +FD + + + +T+I G+A ++ I LF +
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 103 MLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLST 162
ML ++P++F+ L S L + +G + + +N+F+ +AL+D+Y K
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK--- 360
Query: 163 IEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQT 222
CG + RG +VF EM E+++V NA + G ++
Sbjct: 361 -----------------------CGAMARG-----FEVFKEMKEKDIVIMNAAISGLAKN 392
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
GH + + F + G P STF ++ + G RF AI C+ L V
Sbjct: 393 GHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN-AISCVYALKRTVE 451
Query: 283 NS--LISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ ++ + + G ++D+ + + R NA+V G +G
Sbjct: 452 HYGCMVDLWGRAGMLDDAYRLICDMPMRP----NAIVWGALLSG 491
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 31/194 (15%)
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKR 191
+Q+H L + F+ + LL + + + F TQ PN+ Y +L+ G++
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 192 GRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
+FHE ++ F+ + + G TFP V+
Sbjct: 90 -------HLFHE------------------------TLDLFLSIRKHGLYLHGFTFPLVL 118
Query: 252 TAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
A + ++ +G H+ +KC DV SL+S Y+ G + D+ +F+++ R++V
Sbjct: 119 KACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV 178
Query: 312 SCNAVVCGYAQNGR 325
+ A+ GY +GR
Sbjct: 179 TWTALFSGYTTSGR 192
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 37/220 (16%)
Query: 106 SKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEE 165
++ R + FTF ++L + + + G+Q+HA K+ ++ V +ALL++Y K
Sbjct: 239 NRFRGDYFTFSSLLSACRIEQ----GKQIHAILFKVSYQFDIPVATALLNMYAK------ 288
Query: 166 AQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHN 225
DA + F M RNVVSWNAM+ G +Q G
Sbjct: 289 -------------------------SNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEG 323
Query: 226 EEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVF-VGNS 284
EA+ F ML E P E TF SV+++ AK +A+ K+ A K G D V NS
Sbjct: 324 REAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTK-KGSADFLSVANS 382
Query: 285 LISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
LIS Y++ G++ ++LL F+ + + ++VS +V+ A +G
Sbjct: 383 LISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHG 422
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 118/272 (43%), Gaps = 42/272 (15%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHED-AIHL----FSRMLASKIRPNEFTFG 116
F A +FDE+ + +I G +R + HL SR+L + + + +F
Sbjct: 87 FDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFM 146
Query: 117 TVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP 176
++ T N+ G QLH K GL S+ F ++L+ Y K I EA++
Sbjct: 147 GLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARR-------- 198
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDM- 235
VF + +R++V WNA+V G +EA M
Sbjct: 199 -----------------------VFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMG 235
Query: 236 -LREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGS 294
+ F TF S+++A + GK+ HA K + D+ V +L++ YAK
Sbjct: 236 SDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNH 291
Query: 295 MEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+ D+ F ++ RN+VS NA++ G+AQNG G
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEG 323
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +I GFA+ +A+ LF +ML ++P+E TF +VL S + +Q+ A
Sbjct: 309 SWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
TK G A + V ++L+ Y + + EA F + P++VS+T+++ G E++L
Sbjct: 369 TKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESL 428
Query: 199 QVFHEMPER---NVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
Q+F M ++ + +++ ++ CS G +E + F M
Sbjct: 429 QMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRM 468
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTG--HNEEAVNFFIDMLREGFI 241
L+ Y K F+DA ++F EMP RN+V+WN ++ G Q N A F + R F
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFT 136
Query: 242 PTE---STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDS 298
+F +I + G + H +K + F SL+ FY KCG + ++
Sbjct: 137 DVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEA 196
Query: 299 LLMFNKLLKRNIVSCNAVVCGYAQNG 324
+F +L R++V NA+V Y NG
Sbjct: 197 RRVFEAVLDRDLVLWNALVSSYVLNG 222
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 41/262 (15%)
Query: 64 VACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSR-MLASKIRPNEFTFGTVLHSS 122
+A H FD I + + +I G+ + + I FS ML+S + P+ TF +VL +
Sbjct: 104 LARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
R V+ G ++H A K G +V+V ++L+ LY + KA G+
Sbjct: 164 ---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRY-------KAVGN---------- 203
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
A +F EMP R++ SWNAM+ G Q+G+ +EA+ L G
Sbjct: 204 --------------ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRA 244
Query: 243 TES-TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
+S T S+++A + G H+ +IK + ++FV N LI YA+ G + D +
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 302 FNKLLKRNIVSCNAVVCGYAQN 323
F+++ R+++S N+++ Y N
Sbjct: 305 FDRMYVRDLISWNSIIKAYELN 326
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 33/233 (14%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG-LASNVFVGSALL 154
AI LF M S+I+P+ T ++ + L ++ R + + G ++ +G+A++
Sbjct: 332 AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVV 391
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNA 214
+Y KL ++ A+ VF+ +P +V+SWN
Sbjct: 392 VMYAKLGLVDSARA-------------------------------VFNWLPNTDVISWNT 420
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFIP-TESTFPSVITAAAKIAALGMGKRFHACAIKC 273
++ G +Q G EA+ + M EG I + T+ SV+ A ++ AL G + H +K
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 274 LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
LDVFV SL Y KCG +ED+L +F ++ + N V N ++ + +G G
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 174 QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVN-FF 232
Q NV LV Y G A F + R+V +WN M+ G + G++ E + F
Sbjct: 82 QIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFS 141
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKC 292
+ ML G P TFPSV+ A + G + H A+K DV+V SLI Y++
Sbjct: 142 LFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRY 198
Query: 293 GSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
++ ++ ++F+++ R++ S NA++ GY Q+G
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 36/258 (13%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FDE+ S +I G+ + ++A+ L + + A + T ++L + T +
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGD 262
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
G +H+ + K GL S +FV + L+DLY +
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEF--------------------------- 295
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
GR D +VF M R+++SWN+++ A++ F +M P T
Sbjct: 296 ----GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKL-DVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
S+ + +++ + + ++ L D+ +GN+++ YAK G ++ + +FN L
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 307 KRNIVSCNAVVCGYAQNG 324
+++S N ++ GYAQNG
Sbjct: 412 NTDVISWNTIISGYAQNG 429
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 32/187 (17%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSSTVLRNVVIGRQLHAC 137
S TII G+A+ +AI +++ M +I N+ T+ +VL + + + G +LH
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDA 197
K GL +VFV ++L D+Y K GR EDA
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKC-------------------------------GRLEDA 505
Query: 198 LQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKI 257
L +F+++P N V WN ++ GH E+AV F +ML EG P TF ++++A +
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Query: 258 AALGMGK 264
+ G+
Sbjct: 566 GLVDEGQ 572
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y++ DA +VF E+P+ +VV W+ ++ G + G E + F +ML +G P E +
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 248 PSVITAAAKIAALGMGKRFHA-CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
+ +TA A++ AL GK H K + DVFVG +L+ YAKCG +E ++ +F KL
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 307 KRNIVSCNAVVCGYAQNG 324
+RN+ S A++ GYA G
Sbjct: 282 RRNVFSWAALIGGYAAYG 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 6/194 (3%)
Query: 48 VQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK 107
VQ ++ ++ A +FDEI ++ G+ + + + +F ML
Sbjct: 154 VQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKG 213
Query: 108 IRPNEFTFGTVLHSSTVLRNVVIGRQLHA-CATKIGLASNVFVGSALLDLYVKLSTIEEA 166
+ P+EF+ T L + + + G+ +H K + S+VFVG+AL+D+Y K IE A
Sbjct: 214 LEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETA 273
Query: 167 QKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMV-----GGCSQ 221
+ F NV S+ AL+ GY G + A+ + + + +++V C+
Sbjct: 274 VEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAH 333
Query: 222 TGHNEEAVNFFIDM 235
G EE + +M
Sbjct: 334 GGFLEEGRSMLENM 347
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 38/264 (14%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL----H 120
A H+FD + S T++ G + + + + F +M I+P+ F +++
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
S ++ R G Q+H K GL S+V+V +A+L LY + ++K
Sbjct: 71 SGSMFRE---GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK------------ 115
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
VF EMP+RNVVSW +++ G S G EE ++ + M EG
Sbjct: 116 -------------------VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGV 156
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
E++ VI++ + +G++ +K + + V NSLIS G+++ +
Sbjct: 157 GCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANY 216
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG 324
+F+++ +R+ +S N++ YAQNG
Sbjct: 217 IFDQMSERDTISWNSIAAAYAQNG 240
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 32/249 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +++ F DA+ L M++S N TF + L + GR LH
Sbjct: 329 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 388
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
GL N +G+AL+ +Y K+ + E+++
Sbjct: 389 VVSGLFYNQIIGNALVSMYGKIGEMSESRR------------------------------ 418
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
V +MP R+VV+WNA++GG ++ ++A+ F M EG T SV++A
Sbjct: 419 -VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 477
Query: 259 AL-GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVV 317
L GK HA + + D V NSLI+ YAKCG + S +FN L RNI++ NA++
Sbjct: 478 DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAML 537
Query: 318 CGYAQNGRG 326
A +G G
Sbjct: 538 AANAHHGHG 546
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 121/271 (44%), Gaps = 35/271 (12%)
Query: 55 YGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFT 114
YGL + +V F+E+ D S T+++ G++ + E+ I ++ M + NE +
Sbjct: 107 YGLVSCSRKV----FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 162
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ 174
V+ S +L++ +GRQ+ K GL S + V ++L+ + + ++ A
Sbjct: 163 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN------- 215
Query: 175 HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFID 234
+F +M ER+ +SWN++ +Q GH EE+ F
Sbjct: 216 ------------------------YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL 251
Query: 235 MLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGS 294
M R +T ++++ + G+ H +K V V N+L+ YA G
Sbjct: 252 MRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 311
Query: 295 MEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
++ L+F ++ ++++S N+++ + +GR
Sbjct: 312 SVEANLVFKQMPTKDLISWNSLMASFVNDGR 342
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 32/245 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVV-IGRQLHACAT 139
+I G+A+ + A+ F M + N T +VL + + +++ G+ LHA
Sbjct: 432 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 491
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQ 199
G S+ V ++L+ +Y K + +Q
Sbjct: 492 SAGFESDEHVKNSLITMYAKCGDLSSSQ-------------------------------D 520
Query: 200 VFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAA 259
+F+ + RN+++WNAM+ + GH EE + M G + +F ++AAAK+A
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
L G++ H A+K + D F+ N+ Y+KCG + + + M + R++ S N ++
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640
Query: 320 YAQNG 324
++G
Sbjct: 641 LGRHG 645
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 31/259 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A ++FD++S+ S +I +A+ E++ +FS M N T T+L
Sbjct: 214 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ + GR +H K+G S V V + LL +Y
Sbjct: 274 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA------------------------ 309
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
GR +A VF +MP ++++SWN+++ G + +A+ M+ G
Sbjct: 310 -------GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 362
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
TF S + A G+ H + + +GN+L+S Y K G M +S + +
Sbjct: 363 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 422
Query: 305 LLKRNIVSCNAVVCGYAQN 323
+ +R++V+ NA++ GYA++
Sbjct: 423 MPRRDVVAWNALIGGYAED 441
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y K GR + A +F MP RN VSWN M+ G + G E + FF M G P+
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 248 PSVITAAAKIAAL-GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
S++TA + ++ G + H K DV+V +++ Y G + S +F ++
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 307 KRNIVSCNAVVCGYAQNGR 325
RN+VS +++ GY+ G
Sbjct: 122 DRNVVSWTSLMVGYSDKGE 140
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 91 HCH-EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFV 149
H H E+ + L S+M + + ++F+F L ++ L + G+QLH A K+G + F+
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 602
Query: 150 GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
+A D+Y K I E K + + ++ S+ L+ + G FE+ FHEM E +
Sbjct: 603 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 662
Query: 210 ----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
V++ +++ CS G ++ + ++ DM+ F
Sbjct: 663 KPGHVTFVSLLTACSHGGLVDKGLAYY-DMIARDF 696
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 125/291 (42%), Gaps = 50/291 (17%)
Query: 51 DIIPYGL--DPTTFQVACHMFDEISDLTGESATTIICGFAKR----------HCHED--- 95
D++ GL DP M+ + + GE+ T C KR + D
Sbjct: 297 DVVKMGLHNDPYVCTSLLSMYSKCG-MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGY 355
Query: 96 -AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
A+ LF M + P+ FT V+ +VL G+ +HA K + S + SALL
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL 415
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNA 214
LY K CG DA VF M E+++V+W +
Sbjct: 416 TLYSK--------------------------CGCDP-----DAYLVFKSMEEKDMVAWGS 444
Query: 215 MVGGCSQTGHNEEAVNFFIDMLRE--GFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
++ G + G +EA+ F DM + P SV A A + AL G + H IK
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Query: 273 CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
L+VFVG+SLI Y+KCG E +L +F + N+V+ N+++ Y++N
Sbjct: 505 TGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN 555
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 40/300 (13%)
Query: 30 KTVHTHYHSLATKHENTVVQKDIIPY---GLDPTTFQVACHMFDEISDLTGESATTIICG 86
K+VH + +T+ + Y G DP + V F + + + ++I G
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV----FKSMEEKDMVAWGSLISG 448
Query: 87 FAKRHCHEDAIHLFSRMLASK--IRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA 144
K ++A+ +F M ++P+ +V ++ L + G Q+H K GL
Sbjct: 449 LCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV 508
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
NVFVGS+L+DLY K E A K F N+V
Sbjct: 509 LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV------------------------- 543
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
+WN+M+ S+ E +++ F ML +G P + SV+ A + A+L GK
Sbjct: 544 ------AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK 597
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
H ++ D + N+LI Y KCG + + +F K+ +++++ N ++ GY +G
Sbjct: 598 SLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHG 657
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 34/249 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV--VIGRQLHACA 138
++I G+ K ++ + F RML +RP+ F+ V+ N G+Q+H
Sbjct: 137 NSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFM 196
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
+ L ++ F+ +AL+D+Y K G DA
Sbjct: 197 LRNSLDTDSFLKTALIDMYFKF-------------------------------GLSIDAW 225
Query: 199 QVFHEMPER-NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKI 257
+VF E+ ++ NVV WN M+ G +G E +++ ++ ++F + A ++
Sbjct: 226 RVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQS 285
Query: 258 AALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVV 317
G G++ H +K D +V SL+S Y+KCG + ++ +F+ ++ + + NA+V
Sbjct: 286 ENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMV 345
Query: 318 CGYAQNGRG 326
YA+N G
Sbjct: 346 AAYAENDYG 354
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
++A +F +S + ++I +++ + E +I LF+ ML+ I P+ + +VL +
Sbjct: 528 EMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAI 587
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
+ +++ G+ LH ++G+ S+ + +AL+D+YVK + A+ F QH +++++
Sbjct: 588 SSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWN 647
Query: 183 ALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
++ GY G AL +F EM + + V++ +++ C+ +G EE N F M ++
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQD 707
Query: 239 -GFIPTESTFPSVITAAAKIAAL 260
G P + +++ + L
Sbjct: 708 YGIEPNMEHYANMVDLLGRAGLL 730
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 117/262 (44%), Gaps = 32/262 (12%)
Query: 65 ACHMFDEISDLTGESA-TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSST 123
A +F EI D + +I GF E ++ L+ + ++ +F L + +
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
N GRQ+H K+GL ++ +V ++LL +Y K + EA+ F
Sbjct: 284 QSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS------------ 331
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
C KR L++ WNAMV ++ + A++ F M ++ +P
Sbjct: 332 --CVVDKR------LEI-----------WNAMVAAYAENDYGYSALDLFGFMRQKSVLPD 372
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
T +VI+ + + GK HA K + + ++L++ Y+KCG D+ L+F
Sbjct: 373 SFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFK 432
Query: 304 KLLKRNIVSCNAVVCGYAQNGR 325
+ ++++V+ +++ G +NG+
Sbjct: 433 SMEEKDMVAWGSLISGLCKNGK 454
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 42/240 (17%)
Query: 96 AIHLFSRML-ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
A+HL+S+ +S + FTF ++L + + L N+ G+ +H +G + F+ ++L+
Sbjct: 43 ALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLV 102
Query: 155 DLYVKLSTIEEAQKAF-GDTQHPNVVS------YTALVCGYLKRGRFEDALQVFHEMPER 207
++YVK ++ A + F G +Q + VS + +++ GY K RF++ +
Sbjct: 103 NMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGV--------- 153
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGM--GKR 265
GC F ML G P + V++ K GK+
Sbjct: 154 ----------GC------------FRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQ 191
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL-KRNIVSCNAVVCGYAQNG 324
H ++ D F+ +LI Y K G D+ +F ++ K N+V N ++ G+ +G
Sbjct: 192 IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSG 251
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 141/301 (46%), Gaps = 33/301 (10%)
Query: 29 TKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFA 88
T +HT L + V +I Y + A +FDE+ + S T++I G+
Sbjct: 48 TNLLHTLTLKLGFASDTFTVNHLVISY-VKLKEINTARKLFDEMCEPNVVSWTSVISGYN 106
Query: 89 KRHCHEDAIHLFSRMLASK-IRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNV 147
++A+ +F +M + + PNE+TF +V + + L IG+ +HA GL N+
Sbjct: 107 DMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNI 166
Query: 148 FVGSALLDLYVKLSTIEEAQKAFGDT--QHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
V S+L+D+Y K + +E A++ F NVVS+T+++ Y + R +A+++F
Sbjct: 167 VVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFR--- 223
Query: 206 ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
S+NA + + N F+ SVI+A + + L GK
Sbjct: 224 -----SFNAAL--------TSDRANQFM-------------LASVISACSSLGRLQWGKV 257
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
H + + + V SL+ YAKCGS+ + +F ++ +++S +++ A++G
Sbjct: 258 AHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGL 317
Query: 326 G 326
G
Sbjct: 318 G 318
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN 177
++H + N LH K+G AS+ F + L+ YVKL I A+K F + PN
Sbjct: 35 LVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPN 94
Query: 178 VVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
VVS+T+++ GY G+ ++AL +F +M E V
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVP-------------------------- 128
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMED 297
P E TF SV A + +A +GK HA + ++ V +SL+ Y KC +E
Sbjct: 129 ----PNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVET 184
Query: 298 SLLMFNKLL--KRNIVSCNAVVCGYAQNGRG 326
+ +F+ ++ RN+VS +++ YAQN RG
Sbjct: 185 ARRVFDSMIGYGRNVVSWTSMITAYAQNARG 215
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 10/233 (4%)
Query: 28 ITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGE--SATTIIC 85
I K +H ++ N VV ++ + A +FD + S T++I
Sbjct: 149 IGKNIHARLE-ISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMIT 207
Query: 86 GFAKRHCHEDAIHLFSRMLA--SKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGL 143
+A+ +AI LF A + R N+F +V+ + + L + G+ H T+ G
Sbjct: 208 AYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGY 267
Query: 144 ASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHE 203
SN V ++LLD+Y K ++ A+K F + +V+SYT+++ K G E A+++F E
Sbjct: 268 ESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDE 327
Query: 204 MP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVI 251
M N V+ ++ CS +G E + + M + G +P + V+
Sbjct: 328 MVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVV 380
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F A +F+ + D S TI+ GF A++ RM ++ + + FT+ T L
Sbjct: 127 FDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSF 183
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
++G QL + K GL S++ VG++ + +Y +
Sbjct: 184 CVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSR---------------------- 221
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTG-HNEEAVNFFIDMLREGF 240
G F A +VF EM ++++SWN+++ G SQ G EAV F DM+REG
Sbjct: 222 ---------SGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV 272
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
+F SVIT L + ++ H IK + + VGN L+S Y+KCG +E
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 301 MFNKLLKRNIVSCNAVV 317
+F+++ +RN+VS ++
Sbjct: 333 VFHQMSERNVVSWTTMI 349
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 37/265 (13%)
Query: 61 TFQVACHMFDEISDLTGESATTIICGFAKRHCHE-DAIHLFSRMLASKIRPNEFTFGTVL 119
+F+ A +FDE+S S +++ G ++ +A+ +F M+ + + +F +V+
Sbjct: 224 SFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVI 283
Query: 120 HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV 179
+ ++ + RQ+H K G S + VG+ L+ Y K +E + F NVV
Sbjct: 284 TTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVV 343
Query: 180 SYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG 239
S+T ++ + + ++AV+ F++M +G
Sbjct: 344 SWTTMI------------------------------------SSNKDDAVSIFLNMRFDG 367
Query: 240 FIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSL 299
P E TF +I A + G + H IK + VGNS I+ YAK ++ED+
Sbjct: 368 VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAK 427
Query: 300 LMFNKLLKRNIVSCNAVVCGYAQNG 324
F + R I+S NA++ G+AQNG
Sbjct: 428 KAFEDITFREIISWNAMISGFAQNG 452
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 96/175 (54%), Gaps = 7/175 (4%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
F++I+ S +I GFA+ +A+ +F A++ PNE+TFG+VL++ ++
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDI 488
Query: 129 VI--GRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+ G++ HA K+GL S V SALLD+Y K I+E++K F + N +T+++
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 187 GYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
Y G FE + +FH+M + NV V++ +++ C++ G ++ F M+
Sbjct: 549 AYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE 603
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 39/259 (15%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+F ++S+ S TT+I +DA+ +F M + PNE TF ++++
Sbjct: 333 VFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQ 387
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
+ G ++H K G S VG++ + LY K +E+A+KAF D ++S+ A++ G
Sbjct: 388 IKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISG 447
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
+ +Q G + EA+ F+ E +P E TF
Sbjct: 448 F-------------------------------AQNGFSHEALKMFLSAAAET-MPNEYTF 475
Query: 248 PSVITAA--AKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
SV+ A A+ ++ G+R HA +K V ++L+ YAK G++++S +FN++
Sbjct: 476 GSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM 535
Query: 306 LKRNIVSCNAVVCGYAQNG 324
++N +++ Y+ +G
Sbjct: 536 SQKNQFVWTSIISAYSSHG 554
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 181 YTALVC-------GYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFI 233
+T+ VC Y K GRF++AL +F + + +VVSWN ++ G N+ A+NF +
Sbjct: 107 FTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD---NQIALNFVV 163
Query: 234 DMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCG 293
M G + T+ + ++ +G + + +K + D+ VGNS I+ Y++ G
Sbjct: 164 RMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSG 223
Query: 294 SMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFTS 330
S + +F+++ ++++S N+++ G +Q G GF +
Sbjct: 224 SFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 37/234 (15%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
++I L+ ML S P+ F+F +L S L V G+QLH TK G + FV +AL+
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVS--YTALVCGYLKRGRFEDALQVFHEMPERNVVSW 212
+Y K + +A+K F + + +S Y AL+ GY + DA +F M E
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKE------ 149
Query: 213 NAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
TG + ++V G +P T P L +G+ H +K
Sbjct: 150 ---------TGVSVDSVTML------GLVPL-CTVPEY---------LWLGRSLHGQCVK 184
Query: 273 CLGKLD--VFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
G LD V V NS I+ Y KCGS+E +F+++ + +++ NAV+ GY+QNG
Sbjct: 185 --GGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNG 236
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 47/254 (18%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+I G+ DA ++F RM + + + T ++ TV + +GR LH K
Sbjct: 125 NALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK 184
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
GL S V V ++ + +Y+K CG ++ GR ++
Sbjct: 185 GGLDSEVAVLNSFITMYMK--------------------------CGSVEAGR-----RL 213
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F EMP + +++WNA++ G SQ G + + + M G P T SV+++ A + A
Sbjct: 214 FDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 261 GMGKRFHACAIKCLGKL--------DVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVS 312
+G +GKL +VFV N+ IS YA+CG++ + +F+ + +++VS
Sbjct: 274 KIGHE--------VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVS 325
Query: 313 CNAVVCGYAQNGRG 326
A++ Y +G G
Sbjct: 326 WTAMIGCYGMHGMG 339
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 13/238 (5%)
Query: 5 MKNLVSRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQV 64
M LV +VP ++ ++ +++H E V+ I Y + + +
Sbjct: 159 MLGLVPLCTVPEYL--------WLGRSLHGQCVKGGLDSEVAVLNSFITMY-MKCGSVEA 209
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
+FDE+ + +I G+++ D + L+ +M +S + P+ FT +VL S
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L IG ++ G NVFV +A + +Y + + +A+ F ++VS+TA+
Sbjct: 270 LGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNA----MVGGCSQTGHNEEAVNFFIDMLRE 238
+ Y G E L +F +M +R + A ++ CS +G ++ + F M RE
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 387
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI 271
WN + + E+++ + MLR G P +FP ++ + A ++ G++ H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSC--NAVVCGYAQNGR 325
K + + FV +LIS Y KCG + D+ +F + + + +S NA++ GY N +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 35/266 (13%)
Query: 64 VACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSST 123
+A +FD + + S + ++ G + ++ LFS M I PNEFTF T L +
Sbjct: 59 MAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACG 118
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
+L + G Q+H KIG V VG++L+D+Y K I EA+K F +++S+ A
Sbjct: 119 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
++ G++ G AL F M E N+ P
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKER-----------------------------PD 209
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIK----CLGKLDVFVGNSLISFYAKCGSMEDSL 299
E T S++ A + + GK+ H ++ C + SL+ Y KCG + +
Sbjct: 210 EFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS--SATITGSLVDLYVKCGYLFSAR 267
Query: 300 LMFNKLLKRNIVSCNAVVCGYAQNGR 325
F+++ ++ ++S ++++ GYAQ G
Sbjct: 268 KAFDQIKEKTMISWSSLILGYAQEGE 293
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 87/150 (58%)
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
N+++ L+ Y K A +VF MPERNVVSW+A++ G G + +++ F +M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
R+G P E TF + + A + AL G + H +K ++ V VGNSL+ Y+KCG +
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
++ +F +++ R+++S NA++ G+ G G
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 35/266 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKI--RPNEFTFGTVLHSS 122
A +F I D + S +I GF A+ F M + I RP+EFT ++L +
Sbjct: 161 AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKAC 220
Query: 123 TVLRNVVIGRQLHACATKIGL--ASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
+ + G+Q+H + G S+ + +L+DLYVK
Sbjct: 221 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVK--------------------- 259
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
CGYL R + F ++ E+ ++SW++++ G +Q G EA+ F +
Sbjct: 260 -----CGYLFSAR-----KAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
S+I A A L GK+ A A+K L+ V NS++ Y KCG ++++
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNGRG 326
F ++ ++++S V+ GY ++G G
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLG 395
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 5/201 (2%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
FD+I + T S +++I G+A+ +A+ LF R+ + + F +++ +
Sbjct: 270 FDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALL 329
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
G+Q+ A A K+ V ++++D+Y+K ++EA+K F + Q +V+S+T ++ GY
Sbjct: 330 RQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGY 389
Query: 189 LKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLR-EGFIPT 243
K G + ++++F+EM N+ V + A++ CS +G +E F +L G P
Sbjct: 390 GKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPR 449
Query: 244 ESTFPSVITAAAKIAALGMGK 264
+ V+ + L K
Sbjct: 450 VEHYACVVDLLGRAGRLKEAK 470
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y++ DA +VF E+P+ +VV W+ ++ G + G E + F +ML G P E +
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSV 221
Query: 248 PSVITAAAKIAALGMGKRFHA-CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
+ +TA A++ AL GK H K + DVFVG +L+ YAKCG +E ++ +F KL
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT 281
Query: 307 KRNIVSCNAVVCGYAQNG 324
+RN+ S A++ GYA G
Sbjct: 282 RRNVFSWAALIGGYAAYG 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 52/270 (19%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDEI ++ G+ + + + +F ML I P+EF+ T L +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 125 LRNVVIGRQLHA-CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
+ + G+ +H K + S+VFVG+AL+D+Y K
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAK------------------------ 266
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIP 242
CG + E A++VF ++ RNV SW A++GG + G+ ++A + RE G P
Sbjct: 267 --CGCI-----ETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKP 319
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG--------NSLISFYAKCGS 294
V+ A A L G+ L ++ G + ++ + G
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRTM-------LENMEARYGITPKHEHYSCIVDLMCRAGR 372
Query: 295 MEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
++D+L + K+ + + S V G NG
Sbjct: 373 LDDALDLIEKMPMKPLAS----VWGALLNG 398
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 37/239 (15%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLH----SSTVLRNVVIGRQLHACATKIGLASNVFV 149
E+ + L+ +M + + FT+ VL S + +++ G+++HA T+ G +S+V++
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 150 GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
+ L+D+Y + ++ A FG MP RNV
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGG-------------------------------MPVRNV 248
Query: 210 VSWNAMVGGCSQTGHNEEAVNFFIDMLRE--GFIPTESTFPSVITAAAKIAALGMGKRFH 267
VSW+AM+ ++ G EA+ F +M+RE P T SV+ A A +AAL GK H
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308
Query: 268 ACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
++ + V ++L++ Y +CG +E +F+++ R++VS N+++ Y +G G
Sbjct: 309 GYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVN 230
G Q P + T L+ Y G + A +VF + +R + WNA+ + GH EE +
Sbjct: 107 GSDQDPFLA--TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 231 FFIDMLREGFIPTESTFPSVITAAAK----IAALGMGKRFHACAIKCLGKLDVFVGNSLI 286
+ M R G T+ V+ A + L GK HA + V++ +L+
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLV 224
Query: 287 SFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
YA+ G ++ + +F + RN+VS +A++ YA+NG+
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKA 264
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 49/216 (22%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRML--ASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHA 136
S + +I +AK +A+ F M+ PN T +VL + L + G+ +H
Sbjct: 250 SWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHG 309
Query: 137 CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFED 196
+ GL S + V SAL+ +Y + CG L+ G+
Sbjct: 310 YILRRGLDSILPVISALVTMYGR--------------------------CGKLEVGQ--- 340
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
+VF M +R+VVSWN+++ G+ ++A+ F +ML G PT TF SV+ A +
Sbjct: 341 --RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSH 398
Query: 257 IAALGMGKRF----------------HACAIKCLGK 276
+ GKR +AC + LG+
Sbjct: 399 EGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 38/270 (14%)
Query: 57 LDPTTFQVACHM-FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML-ASKIRPNEFT 114
L PT+ V HM + I S II F++ +I LF RM S +RP++FT
Sbjct: 82 LFPTSLSVFWHMPYRNIF-----SWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFT 136
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ 174
+L + + R G +H K+G +S++FV SAL+ +YV + + A+K F D
Sbjct: 137 LPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMP 196
Query: 175 HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFID 234
+ V YTA+ GY+++G L +F EM G++
Sbjct: 197 VRDSVLYTAMFGGYVQQGEAMLGLAMFREM------------------GYS--------- 229
Query: 235 MLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGS 294
GF S++ A ++ AL GK H I+ L + +GN++ Y KC
Sbjct: 230 ----GFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSI 285
Query: 295 MEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
++ + +F + +R+++S ++++ GY +G
Sbjct: 286 LDYAHTVFVNMSRRDVISWSSLILGYGLDG 315
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 175 HPNVVSYTALVCGYLKRGR-FEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFI 233
+ NVV + LV Y K F +L VF MP RN+ SWN ++G S++G ++++ F+
Sbjct: 63 YSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFL 122
Query: 234 DMLREGFI-PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKC 292
M RE + P + T P ++ A + G H +K +FV ++L+ Y
Sbjct: 123 RMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDM 182
Query: 293 GSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRGGFTSWATLGL 336
G + + +F+ + R+ V A+ GY Q G A LGL
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE------AMLGL 220
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FD++ T + G+ ++ + +F M S + ++L +
Sbjct: 188 ARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQ 247
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L + G+ +H + + +G+A+ D+YVK S ++ A F + +V+S+++L
Sbjct: 248 LGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSL 307
Query: 185 VCGYLKRGRFEDALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+ GY G + ++F EM E N V++ ++ C+ G E++ +F M
Sbjct: 308 ILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNI 367
Query: 241 IPTESTFPSVITAAAKIAALGMGKRF 266
+P + SV ++ L ++F
Sbjct: 368 VPELKHYASVADCMSRAGLLEEAEKF 393
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 158/347 (45%), Gaps = 71/347 (20%)
Query: 48 VQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRML-AS 106
VQ I+ D + A +FDE+S+ S + +I + + + LF M+ +
Sbjct: 162 VQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEA 220
Query: 107 KIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA-SNVFVGSALLDLYVKLSTIEE 165
K P+ T +VL + TV+ ++ +GR +H + + G ++VFV ++L+D+Y K ++
Sbjct: 221 KTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDS 280
Query: 166 AQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH-------EMPERNVVSW------ 212
A + F +T N+VS+ +++ G++ R+++AL++FH E+ E VVS
Sbjct: 281 AFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKF 340
Query: 213 -------NAMVGGCSQTGH--NEEAVNFFIDMLRE-------GFIPTESTFPSVITAAAK 256
++ G + G+ NE A++ ID G + T+ V++ +
Sbjct: 341 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 400
Query: 257 IAALGMGKR-----------------------FHACAI----------------KCLGKL 277
I+ L R +AC++ + L
Sbjct: 401 ISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN 460
Query: 278 DVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
D+ VG S++ YAKCG++E + F+++ ++NI+S ++ YA NG
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAING 507
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 36/259 (13%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
FD ++ S I+ G E+ + FS++ PN T V+H+ L
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLW-- 141
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
G ++H + G V +++L +Y ++
Sbjct: 142 FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS------------------------ 177
Query: 189 LKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI-PTESTF 247
A ++F EM ER+V+SW+ ++ Q+ + F +M+ E P T
Sbjct: 178 --------ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTV 229
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKL-DVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
SV+ A + + +G+ H +I+ L DVFV NSLI Y+K ++ + +F++
Sbjct: 230 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 289
Query: 307 KRNIVSCNAVVCGYAQNGR 325
RNIVS N+++ G+ N R
Sbjct: 290 CRNIVSWNSILAGFVHNQR 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y+K G L+ F M R+ VSWN +V G G EE + +F + GF P ST
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
VI A + G++ H I+ V NS++ YA S+ L F+++ +
Sbjct: 131 VLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKL-FDEMSE 187
Query: 308 RNIVSCNAVVCGYAQN 323
R+++S + V+ Y Q+
Sbjct: 188 RDVISWSVVIRSYVQS 203
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 139/329 (42%), Gaps = 66/329 (20%)
Query: 64 VACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSST 123
+A +F+++ + ++I A+ A +FS M + + FT+ +L + +
Sbjct: 69 LAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS 128
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLY-------------------------- 157
+ + + +H K+GL+S+++V +AL+D Y
Sbjct: 129 GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSW 188
Query: 158 -------VKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVV 210
VK + +A++ F + +++S+ ++ GY + A ++F +MPERN V
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 211 SWNAMVGGCSQTGHNE---------------------------------EAVNFFIDMLR 237
SW+ MV G S+ G E EA M+
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMED 297
G + S++ A + L +G R H+ + + +V N+L+ YAKCG+++
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 298 SLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+ +FN + K+++VS N ++ G +G G
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHG 397
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 35/193 (18%)
Query: 62 FQVACHMFDEISDLTGESATT---IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTV 118
++A MFD++ L ++ T II G+A++ ++A L +M+AS ++ + ++
Sbjct: 263 MEMARVMFDKMP-LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISI 321
Query: 119 LHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNV 178
L + T + +G ++H+ + L SN +V +ALLD+Y K
Sbjct: 322 LAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAK------------------- 362
Query: 179 VSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
CG LK+ A VF+++P++++VSWN M+ G GH +EA+ F M RE
Sbjct: 363 -------CGNLKK-----AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE 410
Query: 239 GFIPTESTFPSVI 251
G P + TF +V+
Sbjct: 411 GIRPDKVTFIAVL 423
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 32/260 (12%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLR-- 126
F +I S +II +++ A +FS M RP E+TFG+++ ++ L
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEP 222
Query: 127 NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVC 186
+V + Q+ K GL +++FVGS L+ + K ++ A+K F + N V+ L+
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMV 282
Query: 187 GYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTEST 246
G +++ E+A ++F +M N ID+ E ++ S+
Sbjct: 283 GLVRQKWGEEATKLFMDM-------------------------NSMIDVSPESYVILLSS 317
Query: 247 FPSVITAAAKIAALGMGKRFHACAIKCLGKLD--VFVGNSLISFYAKCGSMEDSLLMFNK 304
FP + A+ L G+ H I G +D V +GN L++ YAKCGS+ D+ +F
Sbjct: 318 FPEY--SLAEEVGLKKGREVHGHVITT-GLVDFMVGIGNGLVNMYAKCGSIADARRVFYF 374
Query: 305 LLKRNIVSCNAVVCGYAQNG 324
+ ++ VS N+++ G QNG
Sbjct: 375 MTDKDSVSWNSMITGLDQNG 394
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
L+ YL+ G A +VF EMP RN VSW +V G S+ G ++EA+ F DM++EG
Sbjct: 42 LINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSN 101
Query: 244 ESTFPSVITAAAKIAALGM--GKRFHACAIKCLGKLDVFVGNSLISFYAKC-GSMEDSLL 300
+ F SV+ A +I ++G+ G++ H K +D V N LIS Y KC GS+ +L
Sbjct: 102 QYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALC 161
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG--RGGFTSWATL 334
F + +N VS N+++ Y+Q G R F ++++
Sbjct: 162 AFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 36/267 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDE+ S I+ G+++ H++A+ M+ I N++ F +VL +
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114
Query: 125 LRNVVI--GRQLHACATKIGLASNVFVGSALLDLYVK-LSTIEEAQKAFGDTQHPNVVSY 181
+ +V I GRQ+H K+ A + V + L+ +Y K + ++ A AFGD +
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIE------- 167
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
+N VSWN+++ SQ G A F M +G
Sbjct: 168 ------------------------VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 242 PTESTFPSVITAAAKIAALGMGKRFH-ACAIKCLGKL-DVFVGNSLISFYAKCGSMEDSL 299
PTE TF S++T A + + C I+ G L D+FVG+ L+S +AK GS+ +
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 300 LMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+FN++ RN V+ N ++ G + G
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWG 290
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 33/261 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +F ++D S ++I G + C +A+ + M I P FT + L S
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L+ +G+Q+H + K+G+ NV V +AL+ LY +
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE------------------------- 462
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHN-EEAVNFFIDMLREGFIPT 243
GYL R ++F MPE + VSWN+++G +++ + EAV F++ R G
Sbjct: 463 -TGYLNECR-----KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLN 516
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
TF SV++A + ++ +GK+ H A+K + N+LI+ Y KCG M+ +F+
Sbjct: 517 RITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFS 576
Query: 304 KLL-KRNIVSCNAVVCGYAQN 323
++ +R+ V+ N+++ GY N
Sbjct: 577 RMAERRDNVTWNSMISGYIHN 597
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 7/149 (4%)
Query: 182 TALVCGYLKRGRFEDALQVFHEMPER-NVVSWNAMVGGCSQTGHNE---EAVNFFIDMLR 237
AL+ Y K G + ++F M ER + V+WN+M+ G HNE +A++ ML+
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI---HNELLAKALDLVWFMLQ 612
Query: 238 EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMED 297
G + +V++A A +A L G HAC+++ + DV VG++L+ Y+KCG ++
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDY 672
Query: 298 SLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+L FN + RN S N+++ GYA++G+G
Sbjct: 673 ALRFFNTMPVRNSYSWNSMISGYARHGQG 701
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 32/184 (17%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
++I G+ A+ L ML + R + F + TVL + + + G ++HAC+ +
Sbjct: 588 NSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR 647
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
L S+V VGSAL+D+Y K GR + AL+
Sbjct: 648 ACLESDVVVGSALVDMYSKC-------------------------------GRLDYALRF 676
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES-TFPSVITAAAKIAA 259
F+ MP RN SWN+M+ G ++ G EEA+ F M +G P + TF V++A +
Sbjct: 677 FNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL 736
Query: 260 LGMG 263
L G
Sbjct: 737 LEEG 740
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 125/263 (47%), Gaps = 35/263 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIR--PNEFTFGTVLHSS 122
A +F+E+ + S +I + + + DAI +F RM++ ++ P+ +T+ V ++
Sbjct: 68 ARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAA 127
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
L+++ +G +H + + +V +ALL +Y+
Sbjct: 128 GELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNF---------------------- 165
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
G+ E A VF M R+V+SWN M+ G + G+ +A+ F M+ E
Sbjct: 166 ---------GKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDL 216
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAI-KCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
+T S++ + L MG+ H K LG + V N+L++ Y KCG M+++ +
Sbjct: 217 DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGD-KIEVKNALVNMYLKCGRMDEARFV 275
Query: 302 FNKLLKRNIVSCNAVVCGYAQNG 324
F+++ +R++++ ++ GY ++G
Sbjct: 276 FDRMERRDVITWTCMINGYTEDG 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 120/276 (43%), Gaps = 31/276 (11%)
Query: 48 VQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASK 107
VQ ++ ++ ++A +FD + + S T+I G+ + DA+ +F M+
Sbjct: 154 VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213
Query: 108 IRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQ 167
+ + T ++L L+++ +GR +H + L + V +AL+++Y+K
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLK-------- 265
Query: 168 KAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEE 227
CG + RF VF M R+V++W M+ G ++ G E
Sbjct: 266 ------------------CGRMDEARF-----VFDRMERRDVITWTCMINGYTEDGDVEN 302
Query: 228 AVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLIS 287
A+ M EG P T S+++ + GK H A++ D+ + SLIS
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 362
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
YAKC ++ +F+ K + +A++ G QN
Sbjct: 363 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQN 398
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 83/148 (56%), Gaps = 7/148 (4%)
Query: 179 VSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
+S T +CG++ R ++F EMP+ +++S+N ++ + G +A++ FI M+ E
Sbjct: 55 LSVTYALCGHITYAR-----KLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE 109
Query: 239 GF--IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
G +P T+P V AA ++ ++ +G H ++ D +V N+L++ Y G +E
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ +F+ + R+++S N ++ GY +NG
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNG 197
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+ II G + DA+ LF RM + PN T ++L + L ++ +H TK
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
G S++ + L+ +Y K T+E A K F Q +VV + AL+ GY G +
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
ALQVF EM N +++ + + CS +G EE + F ML
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFML 552
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 39/265 (14%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD + + T +I G+ + E+A+ L M +RPN T +++
Sbjct: 275 VFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALK 334
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
V G+ LH A + + S++ + ++L+ +Y K ++ + F
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASK------------ 382
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
+H P W+A++ GC Q +A+ F M RE P +T
Sbjct: 383 -------------YHTGP------WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 248 PSVITAAAKIAALGMGKRFHACAIKC--LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
S++ A A +A L H K + LD G L+ Y+KCG++E + +FN +
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG--LVHVYSKCGTLESAHKIFNGI 481
Query: 306 LK----RNIVSCNAVVCGYAQNGRG 326
+ +++V A++ GY +G G
Sbjct: 482 QEKHKSKDVVLWGALISGYGMHGDG 506
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 38/250 (15%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL----HSSTVLRNVVIGRQL 134
S T++ G + + + + F +M I+P+ F +++ S ++ R G Q+
Sbjct: 8 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE---GVQV 64
Query: 135 HACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRF 194
H K GL S+V+V +A+L LY Y + C
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYG---------------------VYGLVSC-------- 95
Query: 195 EDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
+ +VF EMP+RNVVSW +++ G S G EE ++ + M EG E++ VI++
Sbjct: 96 --SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 153
Query: 255 AKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCN 314
+ +G++ +K + + V NSLIS G+++ + +F+++ +R+ +S N
Sbjct: 154 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 213
Query: 315 AVVCGYAQNG 324
++ YAQNG
Sbjct: 214 SIAAAYAQNG 223
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 32/249 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +++ F DA+ L M++S N TF + L + GR LH
Sbjct: 312 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
GL N +G+AL+ +Y K+ + E+++
Sbjct: 372 VVSGLFYNQIIGNALVSMYGKIGEMSESRR------------------------------ 401
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
V +MP R+VV+WNA++GG ++ ++A+ F M EG T SV++A
Sbjct: 402 -VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 460
Query: 259 AL-GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVV 317
L GK HA + + D V NSLI+ YAKCG + S +FN L RNI++ NA++
Sbjct: 461 DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAML 520
Query: 318 CGYAQNGRG 326
A +G G
Sbjct: 521 AANAHHGHG 529
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 55 YGLDPTTFQVAC--HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNE 112
YGL V+C +F+E+ D S T+++ G++ + E+ I ++ M + NE
Sbjct: 90 YGL------VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNE 143
Query: 113 FTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGD 172
+ V+ S +L++ +GRQ+ K GL S + V ++L+ + + ++ A
Sbjct: 144 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN----- 198
Query: 173 TQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFF 232
+F +M ER+ +SWN++ +Q GH EE+ F
Sbjct: 199 --------------------------YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKC 292
M R +T ++++ + G+ H +K V V N+L+ YA
Sbjct: 233 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 293 GSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
G ++ L+F ++ ++++S N+++ + +GR
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 325
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 32/245 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVV-IGRQLHACAT 139
+I G+A+ + A+ F M + N T +VL + + +++ G+ LHA
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 474
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQ 199
G S+ V ++L+ +Y K + +Q
Sbjct: 475 SAGFESDEHVKNSLITMYAKCGDLSSSQ-------------------------------D 503
Query: 200 VFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAA 259
+F+ + RN+++WNAM+ + GH EE + M G + +F ++AAAK+A
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCG 319
L G++ H A+K + D F+ N+ Y+KCG + + + M + R++ S N ++
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623
Query: 320 YAQNG 324
++G
Sbjct: 624 LGRHG 628
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 31/259 (11%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A ++FD++S+ S +I +A+ E++ +FS M N T T+L
Sbjct: 197 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 256
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+ + GR +H K+G S V V + LL +Y
Sbjct: 257 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG------------------------- 291
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
GR +A VF +MP ++++SWN+++ G + +A+ M+ G
Sbjct: 292 ------AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 345
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
TF S + A G+ H + + +GN+L+S Y K G M +S + +
Sbjct: 346 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 405
Query: 305 LLKRNIVSCNAVVCGYAQN 323
+ +R++V+ NA++ GYA++
Sbjct: 406 MPRRDVVAWNALIGGYAED 424
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 91 HCH-EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFV 149
H H E+ + L S+M + + ++F+F L ++ L + G+QLH A K+G + F+
Sbjct: 526 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 585
Query: 150 GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
+A D+Y K I E K + + ++ S+ L+ + G FE+ FHEM E +
Sbjct: 586 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 645
Query: 210 ----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
V++ +++ CS G ++ + ++ DM+ F
Sbjct: 646 KPGHVTFVSLLTACSHGGLVDKGLAYY-DMIARDF 679
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 204 MPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL-GM 262
MP RN VSWN M+ G + G E + FF M G P+ S++TA + ++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 263 GKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQ 322
G + H K DV+V +++ Y G + S +F ++ RN+VS +++ GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 323 NGR 325
G
Sbjct: 121 KGE 123
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 5/228 (2%)
Query: 44 ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM 103
++ +Q II + A +F+ D TT+I GFAK +A LF +M
Sbjct: 244 QSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 104 LASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTI 163
L I PN+ T +L S + L ++ G+ +H + G+ + ++ +D+Y + I
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Query: 164 EEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGC 219
+ A+ F NV+S+++++ + G FE+AL FH+M +NV V++ +++ C
Sbjct: 364 QMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSAC 423
Query: 220 SQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITAAAKIAALGMGKRF 266
S +G+ +E F M R+ G +P E + ++ + +G K F
Sbjct: 424 SHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSF 471
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 129/292 (44%), Gaps = 35/292 (11%)
Query: 37 HSLATKH---ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCH 93
H LA K+ ++ V ++ T + A +FDEI ++ G+ K
Sbjct: 132 HGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKD 191
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG-LASNVFVGSA 152
+ LF M + + + T ++ + + +G+ +H + + + + ++ ++
Sbjct: 192 PEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQAS 251
Query: 153 LLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSW 212
++D+YVK ++ A+K +F +RNVV W
Sbjct: 252 IIDMYVKCRLLDNARK-------------------------------LFETSVDRNVVMW 280
Query: 213 NAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
++ G ++ EA + F MLRE +P + T +++ + + + +L GK H I+
Sbjct: 281 TTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIR 340
Query: 273 CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
++D S I YA+CG+++ + +F+ + +RN++S ++++ + NG
Sbjct: 341 NGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGING 392
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 36/252 (14%)
Query: 79 SATTIICGFAKRH--CHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHA 136
S TI+ G++K C+ D + L++RM + F + + L + G +H
Sbjct: 74 SWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHG 133
Query: 137 CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFED 196
A K GL + +V +L+++Y +L T+E AQK F + N V + L+ GYLK + +
Sbjct: 134 LAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPE 193
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
++F M + TG +A+ T ++ A
Sbjct: 194 VFRLFCLMRD---------------TGLALDAL----------------TLICLVKACGN 222
Query: 257 IAALGMGKRFHACAIK--CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCN 314
+ A +GK H +I+ + + D ++ S+I Y KC ++++ +F + RN+V
Sbjct: 223 VFAGKVGKCVHGVSIRRSFIDQSD-YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWT 281
Query: 315 AVVCGYAQNGRG 326
++ G+A+ R
Sbjct: 282 TLISGFAKCERA 293
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDE+ T+ G+ + +++ L+ +M +RP+EFT+ V+ + +
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L + G LHA K G V T L
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVA-------------------------------TEL 150
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
V Y+K G A +F M +++V+WNA + C QTG++ A+ +F M +
Sbjct: 151 VMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDS 210
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T S+++A ++ +L +G+ + A K ++ V N+ + + KCG+ E + ++F +
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE 270
Query: 305 LLKRNIVSCNAVVCGYAQNG--RGGFTSWATL 334
+ +RN+VS + ++ GYA NG R T + T+
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 31/177 (17%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A+ F++M A ++ + FT ++L + L ++ IG +++ A K + N+ V +A LD
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 156 LYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAM 215
++ LK G E A +F EM +RNVVSW+ M
Sbjct: 254 MH-------------------------------LKCGNTEAARVLFEEMKQRNVVSWSTM 282
Query: 216 VGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
+ G + G + EA+ F M EG P TF V++A + + GKR+ + ++
Sbjct: 283 IVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQ 199
K+G S+V+V +AL+ +Y+ + +A K F + N V++ ++ G G FE AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 200 VFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLR-EGFIPTESTFPSVITAAAKIA 258
+MP R VVSW ++ G ++ +EA+ F M+ + P E T +++ A +
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 259 ALGMGKRFHA-CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL--KRNIVSCNA 315
L M HA + D+ V NSLI YAKCG ++ + F ++ ++N+VS
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 316 VVCGYAQNGRGG-----FTSWATLGL 336
++ +A +G G F LGL
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGL 356
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 11/187 (5%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLA-SKIRPNEFTFGTVLH 120
F+ A +++ + T S TTII G+A+ ++AI LFSRM+A I+PNE T +L
Sbjct: 205 FEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILP 264
Query: 121 SSTVLRNVVIGRQLHACATKIGLAS-NVFVGSALLDLYVKLSTIEEAQKAFGDTQH--PN 177
+ L ++ + +HA K G ++ V ++L+D Y K I+ A K F + + N
Sbjct: 265 AVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKN 324
Query: 178 VVSYTALVCGYLKRGRFEDALQVFHEMPER-----NVVSWNAMVGGCSQTG-HNEEAVNF 231
+VS+T ++ + G ++A+ +F +M ER N V+ +++ CS G EE + F
Sbjct: 325 LVSWTTMISAFAIHGMGKEAVSMFKDM-ERLGLKPNRVTMISVLNACSHGGLAEEEFLEF 383
Query: 232 FIDMLRE 238
F M+ E
Sbjct: 384 FNTMVNE 390
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 31/223 (13%)
Query: 103 MLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLST 162
+ +S ++ T+ +L + G+++HA +G A N ++ LL LY LS
Sbjct: 99 LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYA-LS- 156
Query: 163 IEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQT 222
GD Q ++ F + R+++ WNAM+ G Q
Sbjct: 157 --------GDLQTAGIL---------------------FRSLKIRDLIPWNAMISGYVQK 187
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
G +E + + DM + +P + TF SV A + + L GKR HA IK K ++ V
Sbjct: 188 GLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVD 247
Query: 283 NSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
++L+ Y KC S D +F++L RN+++ +++ GY +G+
Sbjct: 248 SALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 290
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 101/201 (50%), Gaps = 7/201 (3%)
Query: 71 EISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVI 130
+I DL +A +I G+ ++ ++ + ++ M ++I P+++TF +V + + L +
Sbjct: 170 KIRDLIPWNA--MISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEH 227
Query: 131 GRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLK 190
G++ HA K + SN+ V SAL+D+Y K S+ + + F NV+++T+L+ GY
Sbjct: 228 GKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGY 287
Query: 191 RGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTES 245
G+ + L+ F +M E N V++ ++ C+ G ++ F M R+ G P
Sbjct: 288 HGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQ 347
Query: 246 TFPSVITAAAKIAALGMGKRF 266
+ +++ + L F
Sbjct: 348 HYAAMVDTLGRAGRLQEAYEF 368
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 123/248 (49%), Gaps = 27/248 (10%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S ++I A+ +A+ FS M + P +F + + + L ++ G+Q H A
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
G S++FV SAL+ +Y +E+A+K F + N+VS+T+++ GY G DA+
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAV 162
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
+F ++ N++ F+D + G + SVI+A +++
Sbjct: 163 SLFKDL----------------LVDENDDDDAMFLDSM--GLV-------SVISACSRVP 197
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGS--MEDSLLMFNKLLKRNIVSCNAV 316
A G+ + H+ IK V VGN+L+ YAK G + + +F++++ ++ VS N++
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 317 VCGYAQNG 324
+ YAQ+G
Sbjct: 258 MSVYAQSG 265
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Query: 64 VACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRP-NEFTFGTVLHSS 122
VA +FD+I D S +I+ +A+ +A +F R++ +K+ N T TVL +
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
+ + IG+ +H ++GL +V VG++++D+Y K +E A+KAF ++ NV S+T
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWT 357
Query: 183 ALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFF 232
A++ GY G AL++F M + N +++ +++ CS G + E +F
Sbjct: 358 AMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 38/271 (14%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTF----GT 117
+ A +FDEI S T++I G+ DA+ LF +L + ++ F G
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 118 VLHSSTVLRNVVIG--RQLHACATKIGLASNVFVGSALLDLYVK--LSTIEEAQKAFGDT 173
V S R G +H+ K G V VG+ LLD Y K + A+K F
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 174 QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFI 233
+ VSY +++ Y + G +A +VF + + VV++NA+
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI------------------ 288
Query: 234 DMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCG 293
T +V+ A + AL +GK H I+ + DV VG S+I Y KCG
Sbjct: 289 ------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 294 SMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+E + F+++ +N+ S A++ GY +G
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 70/117 (59%)
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFH 267
+V SWN+++ +++G + EA+ F M + PT S+FP I A + + + GK+ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 268 ACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
A + D+FV ++LI Y+ CG +ED+ +F+++ KRNIVS +++ GY NG
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 129/275 (46%), Gaps = 40/275 (14%)
Query: 55 YGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFT 114
YG +C +FDE+ + ++I + + A+ LF M+ + NEF
Sbjct: 132 YGRTGELVSSSC-LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIH---KGNEFD 187
Query: 115 FGTVLHSSTVLRNVVIGRQ---LHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFG 171
T+L +++ L ++ + R+ LH A + GL + + +AL++LY K + A+
Sbjct: 188 STTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAE---- 243
Query: 172 DTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNF 231
C VF M R++VSWN ++ C GH +++ +
Sbjct: 244 --------------C-------------VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQY 276
Query: 232 FIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKC--LGKLDVFVGNSLISFY 289
F M G TF VI+A + I L +G+ H IK + V VGNS+IS Y
Sbjct: 277 FKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMY 336
Query: 290 AKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+KCG E + +F +L+ R+++S NA++ G+A NG
Sbjct: 337 SKCGDTEAAETVFEELVCRDVISSNAILNGFAANG 371
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 138/321 (42%), Gaps = 57/321 (17%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLA-SKIRPNEFTFGTVLHS 121
+ A +F+E+ S+ I+ GFA E+A + ++M + KI+P+ T ++
Sbjct: 343 EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSI 402
Query: 122 STVLRNVVIGRQLHACATKIGLASNVF-VGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
L GR +H ++ + S V ++++D+Y K +A+ F T H ++VS
Sbjct: 403 CGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVS 462
Query: 181 YTALV-----------------------------------------------------CG 187
+ +++ C
Sbjct: 463 WNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCW 522
Query: 188 YLKRGRFEDALQVFHEMPE-RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES- 245
K G A M E R++ SWN+++ GC+ +GH+ E++ F M REG I +
Sbjct: 523 LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLI 582
Query: 246 TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
T I+A+ + + G+ FH AIK L +LD + N+LI+ Y +C +E ++ +F +
Sbjct: 583 TLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLI 642
Query: 306 LKRNIVSCNAVVCGYAQNGRG 326
N+ S N V+ +QN G
Sbjct: 643 SDPNLCSWNCVISALSQNKAG 663
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 36 YHSLATK---HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHC 92
+H LA K +T +Q +I + A +F ISD S +I ++
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 93 HEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSA 152
+ LF + K+ PNE TF +L +ST L + G Q H + G +N FV +A
Sbjct: 663 GREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAA 719
Query: 153 LLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP-----ER 207
L+D+Y +E K F ++ ++ ++ +++ + G E A+++F E+ E
Sbjct: 720 LVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
N S+ +++ CS +G +E ++++ M
Sbjct: 780 NKSSFISLLSACSHSGFIDEGLSYYKQM 807
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA--SNVFVGSAL 153
++ F M S + TF V+ + + + + +G LH K G + ++V VG+++
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
+ +Y K GDT E A VF E+ R+V+S N
Sbjct: 333 ISMYSKC----------GDT---------------------EAAETVFEELVCRDVISSN 361
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLR-EGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
A++ G + G EEA M + P +T S+ + ++ G+ H ++
Sbjct: 362 AILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVR 421
Query: 273 C-LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ + V NS+I Y KCG + L+F R++VS N+++ ++QNG
Sbjct: 422 MEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 37/270 (13%)
Query: 58 DPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM-LASKIRPNEFTFG 116
D T+ + E DLT S ++I G A H +++ F M KIR + T
Sbjct: 528 DLTSAFLRLETMSETRDLT--SWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLL 585
Query: 117 TVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP 176
+ +S L V+ GR H A K + + + L+ +Y + IE A K FG P
Sbjct: 586 GTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 645
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
N+ SWN ++ SQ E F ++
Sbjct: 646 -------------------------------NLCSWNCVISALSQNKAGREVFQLFRNLK 674
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
E P E TF +++A+ ++ + G + H I+ + + FV +L+ Y+ CG +E
Sbjct: 675 LE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLE 731
Query: 297 DSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+ +F +I + N+V+ + +G G
Sbjct: 732 TGMKVFRNSGVNSISAWNSVISAHGFHGMG 761
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 172 DTQHPNVVSYTALVCG--------------YLKRGRFEDALQVFHEMPERNVVSWNAMVG 217
+T+ P V AL CG Y + G + +F E+ E++V+ WN+M+
Sbjct: 102 ETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT 161
Query: 218 GCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKL 277
+Q G AV FI+M+ +G +T +A + + H AI+
Sbjct: 162 ALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVG 221
Query: 278 DVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
D + N+L++ YAK ++ + +F + R+IVS N ++ NG
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANG 268
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 62 FQVACHMFDEISDLTGESA-TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
VA +F IS+ + A T++ G+ K CH I LF ++ I + + +V+
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
S + + V++G+ LH K L + V ++L+DLY K+ + A + F +
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA------- 494
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+ NV++WNAM+ +E+A+ F M+ E F
Sbjct: 495 -------------------------DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENF 529
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
P+ T +++ A +L G+ H + ++++ + +LI YAKCG +E S
Sbjct: 530 KPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRE 589
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG 324
+F+ +++ V N ++ GY +G
Sbjct: 590 LFDAGNQKDAVCWNVMISGYGMHG 613
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML 236
N+ + L+ Y G+ + +VFH + R++ WN+++ G ++ FF ML
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 237 REGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG-KLDVFVGNSLISFYAKCGSM 295
G P T P V++A A++ +G H +K G + VG S + FY+KCG +
Sbjct: 118 LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFL 177
Query: 296 EDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+D+ L+F+++ R++V+ A++ G+ QNG
Sbjct: 178 QDACLVFDEMPDRDVVAWTAIISGHVQNGE 207
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 119/299 (39%), Gaps = 39/299 (13%)
Query: 32 VHTHYHSLATKH----ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGF 87
V T H L KH NT V + + Q AC +FDE+ D + T II G
Sbjct: 143 VGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGH 202
Query: 88 AKRHCHEDAIHLFSRMLASKI---RPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA 144
+ E + +M ++ +PN T + + L + GR LH A K GLA
Sbjct: 203 VQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLA 262
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
S+ FV S++ Y K EA +F + ++ S+T+++ + G E++ +F EM
Sbjct: 263 SSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
+ G P +I K+ + GK
Sbjct: 323 QNK-------------------------------GMHPDGVVISCLINELGKMMLVPQGK 351
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR-NIVSCNAVVCGYAQ 322
FH I+ LD V NSL+S Y K + + +F ++ + N + N ++ GY +
Sbjct: 352 AFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGK 410
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 11/234 (4%)
Query: 19 THQVVSCRYIT-----KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEIS 73
T + SC +I K++H + + +VV I YG VA MF E +
Sbjct: 437 TSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYG-KMGDLTVAWRMFCE-A 494
Query: 74 DLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQ 133
D + +I + E AI LF RM++ +P+ T T+L + ++ G+
Sbjct: 495 DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQM 554
Query: 134 LHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGR 193
+H T+ N+ + +AL+D+Y K +E++++ F + V + ++ GY G
Sbjct: 555 IHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGD 614
Query: 194 FEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
E A+ +F +M E +V ++ A++ C+ G E+ F+ M + P
Sbjct: 615 VESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPN 668
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 32/219 (14%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TTI+ + + E+A++LFS+M ++ PNE+TF +L+S L + G LH K
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK 366
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G ++V VG+AL+++Y K G EDA +
Sbjct: 367 SGYRNHVMVGNALVNMYAK-------------------------------SGSIEDARKA 395
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
F M R++V+WN M+ GCS G EA+ F M+ G IP TF V+ A + I +
Sbjct: 396 FSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFV 455
Query: 261 GMGKRFHACAIKCLG-KLDVFVGNSLISFYAKCGSMEDS 298
G + +K + D+ ++ +K G +D+
Sbjct: 456 EQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDA 494
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 111 NEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF 170
N T+ + L + LR++ + Q+H+ + G + V AL+++Y K + AQ+ F
Sbjct: 236 NNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVF 295
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVN 230
DT N+ T ++ Y + FE EA+N
Sbjct: 296 DDTHAQNIFLNTTIMDAYFQDKSFE-------------------------------EALN 324
Query: 231 FFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYA 290
F M + P E TF ++ + A+++ L G H +K + V VGN+L++ YA
Sbjct: 325 LFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 291 KCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
K GS+ED+ F+ + R+IV+ N ++ G + +G G
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLG 420
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 32/260 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS-KIRPNEFTFGTVLHSST 123
A +FD + + S ++ G+ + + LF M S + RPNEF V S +
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
+ G+Q H C K GL S+ FV + L+ +Y S EA + D + ++ +++
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
+ GYL+ G F++ L V + + V WN +
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFV-WNNL---------------------------- 238
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
T+ S + + + L + + H+ ++ +V +LI+ Y KCG + + +F+
Sbjct: 239 --TYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFD 296
Query: 304 KLLKRNIVSCNAVVCGYAQN 323
+NI ++ Y Q+
Sbjct: 297 DTHAQNIFLNTTIMDAYFQD 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG-F 240
+L+ Y+K A ++F MPERNVVSW AM+ G +G + E + F M G
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
P E V + + + GK+FH C +K FV N+L+ Y+ C +++
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNG 324
+ + L ++ ++ + GY + G
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECG 216
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 109 RPNEFTFGTVLHSSTVLRNVVIGRQLHA---CATKIGLASNVFVGSALLDLYVKLSTIEE 165
R NE V +S+ LR IG +HA + A + + ++L++LYVK
Sbjct: 33 RLNELL--KVCANSSYLR---IGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR 87
Query: 166 AQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM-------PERNVVSWNAMVGG 218
A+K F NVVS+ A++ GY G + L++F M P V + +
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVAT--VVFKS 145
Query: 219 CSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKL- 277
CS +G EE F L+ G I E +++ + + G AI+ L L
Sbjct: 146 CSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGE-------AIRVLDDLP 198
Query: 278 --DVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCN 314
D+ V +S +S Y +CG+ ++ L + K + V N
Sbjct: 199 YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNN 237
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 33/260 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A H+FDE+ S + + + D + LF ++ + + TF VL + ++
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L GRQ+HA K G + +AL+D+Y
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYS-------------------------- 130
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
K G D+++VF + E+++VSWNA++ G + G +EA+ F M RE +E
Sbjct: 131 -----KYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISE 185
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
T SV+ A + L GK+ HA + G+ V +G ++ISFY+ G + +++ ++N
Sbjct: 186 FTLSSVVKTCASLKILQQGKQVHAMVV-VTGRDLVVLGTAMISFYSSVGLINEAMKVYNS 244
Query: 305 L-LKRNIVSCNAVVCGYAQN 323
L + + V N+++ G +N
Sbjct: 245 LNVHTDEVMLNSLISGCIRN 264
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 117/262 (44%), Gaps = 36/262 (13%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
+ +F+ + + S ++ GF + ++A+ +F+ M ++ +EFT +V+ +
Sbjct: 138 SVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCAS 197
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L+ + G+Q+HA G V +G+A++ Y + I EA K +
Sbjct: 198 LKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVY-------------- 242
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
++L V + V N+++ GC + + +EA F+ M R+ P
Sbjct: 243 -----------NSLNV-----HTDEVMLNSLISGCIRNRNYKEA---FLLMSRQR--PNV 281
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
S + + + L +GK+ H A++ D + N L+ Y KCG + + +F
Sbjct: 282 RVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRA 341
Query: 305 LLKRNIVSCNAVVCGYAQNGRG 326
+ +++VS +++ YA NG G
Sbjct: 342 IPSKSVVSWTSMIDAYAVNGDG 363
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
++I G + +++A L SR RPN + L + ++ IG+Q+H A +
Sbjct: 256 SLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN 310
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF 201
G S+ + + L+D+Y K I +A+ F +VVS+T+++ Y G AL++F
Sbjct: 311 GFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIF 370
Query: 202 HEMPER------NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
EM E N V++ ++ C+ G +E F M++E +
Sbjct: 371 REMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECF-GMMKEKY 414
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 72/130 (55%)
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A +F E+P+R++ S N+ + ++G+ + + F+ + R + TF V+ A +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAV 316
++ G++ HA IK + +LI Y+K G + DS+ +F + ++++VS NA+
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 317 VCGYAQNGRG 326
+ G+ +NG+G
Sbjct: 157 LSGFLRNGKG 166
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 135/312 (43%), Gaps = 28/312 (8%)
Query: 38 SLATKHENTVVQKDIIPYGL------DPTTFQVACHMFDEISD-------LTGESATTII 84
SL K E ++ D++ Y + A ++F E+ + +T S +
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 85 CGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA 144
C + + DA L S M+ KI PN TF ++ + +V +L+ K +
Sbjct: 301 CNYGR---WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAF----GDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
++F S+L++ + ++EA+ F PNVV+Y L+ G+ K R E+ +++
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 201 FHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
F EM +R N V++N ++ G Q G + A F M+ +G P T+ ++ K
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVS 312
L K + D++ N +I K G +ED +F L +K N++
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 313 CNAVVCGYAQNG 324
++ G+ + G
Sbjct: 538 YTTMISGFCRKG 549
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 18/259 (6%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I G + +A+ L RM+A +P+ FT+GTV++ ++ + L K
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALV---CGYLKRGR 193
+ ++V + + ++D + +A F + + PNVV+Y +L+ C Y GR
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY---GR 305
Query: 194 FEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
+ DA ++ +M ER NVV+++A++ + G EA + +M++ P T+ S
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 250 VITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR- 308
+I L K I +V N+LI + K +E+ + +F ++ +R
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 309 ---NIVSCNAVVCGYAQNG 324
N V+ N ++ G Q G
Sbjct: 426 LVGNTVTYNTLIQGLFQAG 444
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 126/315 (40%), Gaps = 32/315 (10%)
Query: 38 SLATKHENTVVQKDIIPYGLDPTTF------QVACHMFDEISDLTGESATTIICGFAKRH 91
SL + +N + D+ Y + F +A + ++ L E + +
Sbjct: 101 SLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGY 160
Query: 92 CH----EDAIHLFSRMLASKIRPNEFTFGTVLH---------SSTVLRNVVIGRQLHACA 138
CH +A+ L +M + +PN TF T++H + L + ++ R
Sbjct: 161 CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
G N +DL + L E K D VV YT ++ DAL
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD-----VVIYTTIIDALCNYKNVNDAL 275
Query: 199 QVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
+F EM + NVV++N+++ G +A DM+ P TF ++I A
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 255 AKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR----NI 310
K L ++ + IK D+F +SLI+ + ++++ MF ++ + N+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 311 VSCNAVVCGYAQNGR 325
V+ N ++ G+ + R
Sbjct: 396 VTYNTLIKGFCKAKR 410
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 12/202 (5%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I GF K E+ + LF M + N T+ T++ + + +++
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFED 196
G+ ++ S LLD K +E+A F Q P++ +Y ++ G K G+ ED
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
+F + + NV+ + M+ G + G EEA F +M +G +P T+ ++I
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 253 A----AAKIAALGMGKRFHACA 270
A K A+ + K +C
Sbjct: 579 ARLRDGDKAASAELIKEMRSCG 600
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 32/285 (11%)
Query: 43 HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSR 102
E+ ++ ++ L A H+FD++ S T +I G +E + LF
Sbjct: 182 QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRA 241
Query: 103 MLASKIRPNEFTFGTVLHSSTVLR-NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLS 161
M +RPN T +VL + L + +++H + + G ++ + +A + +Y +
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCR-- 299
Query: 162 TIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQ 221
CG + R +F R+VV W++M+ G ++
Sbjct: 300 ------------------------CGNVSLSRV-----LFETSKVRDVVMWSSMISGYAE 330
Query: 222 TGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFV 281
TG E +N M +EG T ++++A L H+ +KC + +
Sbjct: 331 TGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILL 390
Query: 282 GNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
GN+LI YAKCGS+ + +F +L ++++VS ++++ Y +G G
Sbjct: 391 GNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHG 435
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 7/181 (3%)
Query: 151 SALLDLYVKLSTIEEAQKAF------GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEM 204
++LL L ++ + + + F + +V+ TALV YLK A VF +M
Sbjct: 152 ASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQM 211
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA-ALGMG 263
+N VSW AM+ GC + E V+ F M RE P T SV+ A ++ +
Sbjct: 212 EVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV 271
Query: 264 KRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
K H + + D + + ++ Y +CG++ S ++F R++V ++++ GYA+
Sbjct: 272 KEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAET 331
Query: 324 G 324
G
Sbjct: 332 G 332
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 31/173 (17%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+++I G+A+ + ++L ++M I N T ++ + T + +H+ K
Sbjct: 322 SSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK 381
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G S++ +G+AL+D+Y K CG L R +V
Sbjct: 382 CGFMSHILLGNALIDMYAK--------------------------CGSLSAAR-----EV 410
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA 253
F+E+ E+++VSW++M+ GH EA+ F M++ G + F ++++A
Sbjct: 411 FYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSA 463
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 33/197 (16%)
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
++G QLH K G + V ++L+ +Y K S +K
Sbjct: 64 LLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRK-------------------- 103
Query: 189 LKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFP 248
VF EM R+ VS+ +++ C Q G EA+ +M GFIP
Sbjct: 104 -----------VFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVA 152
Query: 249 SVITAAAKIAALG-MGKRFHACA-IKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
S++ ++ + + + FHA + + V + +L+ Y K + +F+++
Sbjct: 153 SLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQME 212
Query: 307 KRNIVSCNAVVCGYAQN 323
+N VS A++ G N
Sbjct: 213 VKNEVSWTAMISGCVAN 229
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 15/262 (5%)
Query: 75 LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQL 134
+T S + +C + + DA L S M+ KI P+ FTF ++ + +V +L
Sbjct: 292 VTYSSLISCLCNYGR---WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 135 HACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFG--DTQH--PNVVSYTALVCGYLK 190
+ K + ++ S+L++ + ++EA++ F ++H P+VV+Y L+ G+ K
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 191 RGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTEST 246
R E+ ++VF EM +R N V++N ++ G Q G + A F +M+ +G P T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 247 FPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL- 305
+ +++ K L + + ++ N +I K G +ED +F L
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 306 ---LKRNIVSCNAVVCGYAQNG 324
+K ++V+ N ++ G+ + G
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKG 550
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I G + +A+ L RM+A +P+ T+G V++ + + L +
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFED 196
L V + + ++D K +++A F + + PNVV+Y++L+ GR+ D
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A ++ +M ER +V +++A++ + G EA + +M++ P+ T+ S+I
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR---- 308
L K+ + DV N+LI + K +E+ + +F ++ +R
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 309 NIVSCNAVVCGYAQNG 324
N V+ N ++ G Q G
Sbjct: 430 NTVTYNILIQGLFQAG 445
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 43/247 (17%)
Query: 91 HCHE----DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN 146
+CH +A+ L +M + +PN TF T++H G LH A++
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH----------GLFLHNKASE------ 204
Query: 147 VFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP- 205
AL+D V P++V+Y +V G KRG + A + ++M
Sbjct: 205 ---AMALIDRMVAKGC------------QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 206 ---ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGM 262
E V+ +N ++ G + H ++A+N F +M +G P T+ S+I+
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 263 GKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR----NIVSCNAVVC 318
R + I+ DVF ++LI + K G + ++ ++++++KR +IV+ ++++
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 319 GYAQNGR 325
G+ + R
Sbjct: 370 GFCMHDR 376
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F V+ H F ++ + T+I GF K E+ + +F M + N T+ ++
Sbjct: 386 FMVSKHCFPDVV-----TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPN 177
+ + +++ G+ N+ + LLD K +E+A F Q P
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 178 VVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFI 233
+ +Y ++ G K G+ ED +F + + +VV++N M+ G + G EEA F
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 234 DMLREGFIPTESTFPSVITA 253
+M +G +P + ++I A
Sbjct: 561 EMKEDGTLPNSGCYNTLIRA 580
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
+DA+ LF M+ S+ P+ F +L + + + L +G+ N + S L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 154 LDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEM----P 205
++ + + S + A G PN+V+ ++L+ GY R +A+ + +M
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 206 ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
+ N V++N ++ G EA+ M+ +G P T+ V+ K +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA-- 240
Query: 266 FHACAIKCLGKLD--VFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCG 319
F+ GKL+ V + N++I K M+D+L +F ++ ++ N+V+ ++++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 320 YAQNGR 325
GR
Sbjct: 301 LCNYGR 306
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 73 SDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGR 132
SD T + + G++ ++I ++S M I+PN+ TF +L + + GR
Sbjct: 74 SDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGR 133
Query: 133 QLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRG 192
Q+ K G +V+VG+ L+ LY +A+K F + NVVS+ +++ ++ G
Sbjct: 134 QIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENG 193
Query: 193 RFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
+ +V C F +M+ + F P E+T +++
Sbjct: 194 KLN-------------------LVFEC------------FCEMIGKRFCPDETTMVVLLS 222
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVS 312
A L +GK H+ + +L+ +G +L+ YAK G +E + L+F +++ +N+ +
Sbjct: 223 ACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWT 280
Query: 313 CNAVVCGYAQNG 324
+A++ G AQ G
Sbjct: 281 WSAMIVGLAQYG 292
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 211 SWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACA 270
+WN + G S + E++ + +M R G P + TFP ++ A A L G++
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 271 IKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGR 325
+K DV+VGN+LI Y C D+ +F+++ +RN+VS N+++ +NG+
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDE+++ S +I+ + F M+ + P+E T +L S
Sbjct: 167 ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLL--SAC 224
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
N+ +G+ +H+ L N +G+AL+D+Y K +E A+ F NV +++A+
Sbjct: 225 GGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAM 284
Query: 185 VCGYLKRGRFEDALQVFHEMPER-----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREG 239
+ G + G E+ALQ+F +M + N V++ ++ CS TG ++ +F +M +
Sbjct: 285 IVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIH 344
Query: 240 FIPTESTFPSVITAAAKIAALGMGKRFH 267
I P +I A + LG R +
Sbjct: 345 KIK-----PMMIHYGAMVDILGRAGRLN 367
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 114/252 (45%), Gaps = 48/252 (19%)
Query: 94 EDAIHLFSRMLA--SKIRPNEFTFGTVL---HSSTVLRNVVIGRQLHACATKIG-LASNV 147
ED+I +F+ + S + NE TF VL S + +GR +H K+G L +
Sbjct: 88 EDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESE 147
Query: 148 FVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER 207
+G+ LL Y K + A+K VF EMPER
Sbjct: 148 LIGTTLLHFYAKNGDLRYARK-------------------------------VFDEMPER 176
Query: 208 NVVSWNAMVGG-CSQTGHNEEAVNFFIDMLRE------GFIPTESTFPSVITAAAKIAAL 260
V+WNAM+GG CS + + R G PT++T V++A ++ L
Sbjct: 177 TSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLL 236
Query: 261 GMGKRFHACAIKCLG---KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVV 317
+G H I+ LG ++DVF+G +L+ Y+KCG + ++ +F + +N+ + ++
Sbjct: 237 EIGSLVHG-YIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMA 295
Query: 318 CGYAQNGRGGFT 329
G A NGRG T
Sbjct: 296 TGLALNGRGNET 307
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 56/274 (20%)
Query: 28 ITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGF 87
+ + VH L +E+ ++ ++ + + A +FDE+ + T + +I G+
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 88 AK-----RHCHEDAIHLFSRM--LASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
H A+ LF R S +RP + T VL + + + IG +H K
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 141 IGLAS--NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
+G +VF+G+AL+D+Y K CG L +A
Sbjct: 249 LGFTPEVDVFIGTALVDMYSK--------------------------CGCLN-----NAF 277
Query: 199 QVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
VF M +NV +W +M G + G E N M G P E TF S+++A I
Sbjct: 278 SVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIG 337
Query: 259 AL--------GMGKRF--------HACAIKCLGK 276
+ M RF + C + LGK
Sbjct: 338 LVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGK 371
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 12/248 (4%)
Query: 87 FAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN 146
FAK +D F M+ + RP FT+ ++ +V R L GL +
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 296
Query: 147 VFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFH 202
++++D + K+ +++ F + + P+V++Y AL+ + K G+ L+ +
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYR 356
Query: 203 EMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
EM + NVVS++ +V + G ++A+ F++DM R G +P E T+ S+I A KI
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCN 314
L R ++ + +V +LI M+++ +F K+ + N+ S N
Sbjct: 417 NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 315 AVVCGYAQ 322
A++ G+ +
Sbjct: 477 ALIHGFVK 484
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +T++ F K + AI + M + PNE+T+ +++ ++ + N+ +L
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFG--DTQH--PNVVSYTALVCGYLKRGRF 194
++G+ NV +AL+D ++EA++ FG DT PN+ SY AL+ G++K
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 195 EDALQVFHEMPERNV 209
+ AL++ +E+ R +
Sbjct: 489 DRALELLNELKGRGI 503
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 99/245 (40%), Gaps = 17/245 (6%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +I GF K + A+ L + + I+P+ +GT + L + + +
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN----VVSYTALVCGYLKRGRF 194
+ G+ +N + + L+D Y K E + + + VV++ L+ G K
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 195 EDALQVFHEMP-----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
A+ F+ + + N + AM+ G + E A F M+++G +P + + S
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653
Query: 250 VITAAAK----IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
++ K + AL + + + KLD+ SL+ + C ++ + ++
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGM----KLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Query: 306 LKRNI 310
+ I
Sbjct: 710 IGEGI 714
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQL---HAC 137
TT++ + K + +HL M I TF ++ + +N ++ + + +
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG--LCKNKLVSKAVDYFNRI 603
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGR 193
+ GL +N + +A++D K + +E A F P+ +YT+L+ G K+G
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Query: 194 FEDALQVFHEMPE----RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
+AL + +M E +++++ ++V G S ++A +F +M+ EG P E S
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 723
Query: 250 VI 251
V+
Sbjct: 724 VL 725
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 30/229 (13%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
+ + LF M + PN +T + L + +G+++HA K S+
Sbjct: 267 ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS-------- 318
Query: 155 DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNA 214
+LYV AL+ Y + G+ A ++ +M +VV+WN+
Sbjct: 319 ELYV----------------------CNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCL 274
++ G Q +EA+ FF DM+ G E + S+I A+ +++ L G HA IK
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 275 GKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQN 323
++ VGN+LI Y+KC F ++ ++++S V+ GYAQN
Sbjct: 417 WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 116/244 (47%), Gaps = 32/244 (13%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
++I G+ + +++A+ FS M+A+ + +E + +++ +S L N++ G +LHA K
Sbjct: 355 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
G SN+ VG+ L+D+Y K + +AF +++S+T ++ GY
Sbjct: 415 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGY------------ 462
Query: 201 FHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
+Q + EA+ F D+ ++ E S++ A++ + ++
Sbjct: 463 -------------------AQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSM 503
Query: 261 GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
+ K H C I G LD + N L+ Y KC +M + +F + +++VS +++
Sbjct: 504 LIVKEIH-CHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562
Query: 321 AQNG 324
A NG
Sbjct: 563 ALNG 566
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +FDE+ D T + T+I + A+ L+ M + +F +L +
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAK 194
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF-GDTQHPNVVSYTA 183
LR++ G +LH+ K+G S F+ +AL+ +Y K + A++ F G + + V + +
Sbjct: 195 LRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 254
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
++ Y G+ + L++F EM M G P
Sbjct: 255 ILSSYSTSGKSLETLELFREM---------HMTGPA----------------------PN 283
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIK-CLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
T S +TA + +GK HA +K +++V N+LI+ Y +CG M + +
Sbjct: 284 SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
Query: 303 NKLLKRNIVSCNAVVCGYAQN 323
++ ++V+ N+++ GY QN
Sbjct: 344 RQMNNADVVTWNSLIKGYVQN 364
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 126/266 (47%), Gaps = 35/266 (13%)
Query: 64 VACHM---FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
+ C+M F + D S TT+I G+A+ CH +A+ LF + ++ +E G++L
Sbjct: 436 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVS 180
+S+VL++++I +++H + GL V + + L+D+Y K + A + F + +VVS
Sbjct: 496 ASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVS 554
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+T++ + + G+ EAV F M+ G
Sbjct: 555 WTSM-------------------------------ISSSALNGNESEAVELFRRMVETGL 583
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
+++AAA ++AL G+ H ++ L+ + +++ YA CG ++ +
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 643
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNGRG 326
+F+++ ++ ++ +++ Y +G G
Sbjct: 644 VFDRIERKGLLQYTSMINAYGMHGCG 669
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
LV Y K G +DA +VF EMP+R +WN M+G G A+ + +M EG
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
S+FP+++ A AK+ + G H+ +K F+ N+L+S YAK + + +F+
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 304 KLLKR-NIVSCNAVVCGYAQNGR 325
++ + V N+++ Y+ +G+
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGK 264
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 6/221 (2%)
Query: 22 VVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESAT 81
V+ I K +H H L +TV+Q +++ A +F+ I S T
Sbjct: 499 VLKSMLIVKEIHCHI--LRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
++I A +A+ LF RM+ + + + +L ++ L + GR++H +
Sbjct: 557 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 616
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF 201
G + A++D+Y ++ A+ F + ++ YT+++ Y G + A+++F
Sbjct: 617 GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 202 HEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
+M NV +S+ A++ CS G +E F M E
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHE 717
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 28/342 (8%)
Query: 8 LVSRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPY-----GL-DPTT 61
+V R P +T+ V + SL K E ++ D++ Y GL
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 62 FQVACHMFDEISD-------LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFT 114
A ++F E+ + T S + +C + + DA L S M+ KI PN T
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR---WSDASRLLSDMIERKINPNVVT 330
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF---- 170
F ++ + +V +L+ K + ++F S+L++ + ++EA+ F
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNE 226
PNVV+Y+ L+ G+ K R E+ +++F EM +R N V++ ++ G Q +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 227 EAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLI 286
A F M+ G P T+ ++ K L + + D++ N +I
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 287 SFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYAQNG 324
K G +ED +F L + N+++ N ++ G+ + G
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+T+I GF K E+ + LF M + N T+ T++H R+ + +
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFG----DTQHPNVVSYTALVCGYLKRGRFED 196
+G+ N+ + LLD K + +A F T P++ +Y ++ G K G+ ED
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
++F + + NV+++N M+ G + G EEA + M +G +P T+ ++I
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Query: 253 A 253
A
Sbjct: 582 A 582
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 91 HCHE----DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN 146
+CH DA+ L +M+ +P+ FTF T++H G LH A++
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH----------GLFLHNKASE------ 206
Query: 147 VFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP- 205
AL+D V+ P++V+Y +V G KRG + AL + +M
Sbjct: 207 ---AVALVDQMVQRGC------------QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 206 ---ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGM 262
E +VV +N ++ G + H ++A+N F +M +G P T+ S+I+
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 263 GKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
R + I+ +V ++LI + K G + ++ ++++++KR+I
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TT+I G + +A+ L +M+ +P+ T+GTV++ ++ + L K
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
+ ++V + + ++D K +++A F + + P+V +Y++L+ GR+ D
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A ++ +M ER NVV+++A++ + G EA + +M++ P T+ S+I
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
L K I +V ++LI + K +E+ + +F ++ +R +V
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 32/257 (12%)
Query: 69 FDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNV 128
FDE+S + +I G ++ C AI L++ M++ +R + TF +VL +
Sbjct: 69 FDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFC 128
Query: 129 VIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGY 188
G Q+H +G N+FV SAL+ LY L ++ A
Sbjct: 129 REGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVA---------------------- 166
Query: 189 LKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFP 248
L++F EM +RN+ N ++ QTG ++ ++ M EG T+
Sbjct: 167 ---------LKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYC 217
Query: 249 SVITAAAKIAALGMGKRFHACAIKCLGKL-DVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
+I + + GK+ H+ +K + ++FV N L+ +Y+ CG + S+ FN + +
Sbjct: 218 YMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE 277
Query: 308 RNIVSCNAVVCGYAQNG 324
++++S N++V A G
Sbjct: 278 KDVISWNSIVSVCADYG 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 42/270 (15%)
Query: 63 QVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSS 122
VA +FDE+ D ++ F + + ++ RM + N T+ ++
Sbjct: 164 DVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGC 223
Query: 123 TVLRNVVIGRQLHACATKIGL-ASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
+ R V G+QLH+ K G SN+FV + L+D Y A GD
Sbjct: 224 SHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYY----------SACGD--------- 264
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
+++ F+ +PE++V+SWN++V C+ G ++++ F M G
Sbjct: 265 ------------LSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKR 312
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDV---FVGNSLISFYAKCGSMEDS 298
P+ F S + ++ + + GK+ H +K +G DV V ++LI Y KC +E+S
Sbjct: 313 PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLK-MG-FDVSSLHVQSALIDMYGKCNGIENS 370
Query: 299 LLMFNKLLKRNIVSCNAVV-----CGYAQN 323
L++ L N+ CN+++ CG ++
Sbjct: 371 ALLYQSLPCLNLECCNSLMTSLMHCGITKD 400
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 85 CGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH--SSTVLRNVVIGRQLHACATKIG 142
CG K D I +F M+ +E T TVL S ++ ++ +H CA K G
Sbjct: 395 CGITK-----DIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSG 449
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
A++V V +L+D Y K E ++K F + PN+ T+++ GY + G D +++
Sbjct: 450 YAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLR 509
Query: 203 EMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
EM N+ V+ +++ GCS +G EE F + ES +
Sbjct: 510 EMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSL--------ESKY----------- 550
Query: 259 ALGMGKRFHACAIKCLGK 276
+ G++ +AC + LG+
Sbjct: 551 GISPGRKLYACMVDLLGR 568
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 189 LKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFP 248
+K G A + F EM R+VV++N ++ G S+ G + A+ + +M+ G + STFP
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 249 SVITAAAKIAALGMGKRFHACAIKCLG-KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
SV++ + G + H C + LG ++FV ++L+ YA ++ +L +F+++L
Sbjct: 117 SVLSVCSDELFCREGIQVH-CRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLD 175
Query: 308 RNIVSCNAVVCGYAQNG 324
RN+ CN ++ + Q G
Sbjct: 176 RNLAVCNLLLRCFCQTG 192
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 34/235 (14%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGL-ASNVFVGSAL 153
D++ LFS+M RP+ F + L+ + ++ G+Q+H K+G S++ V SAL
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 154 LDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWN 213
+D+Y K + IE ++ ++ +P N+ N
Sbjct: 358 IDMYGKCNGIE-------------------------------NSALLYQSLPCLNLECCN 386
Query: 214 AMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK--IAALGMGKRFHACAI 271
+++ G ++ + F M+ EG E T +V+ A + +L H CAI
Sbjct: 387 SLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAI 446
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
K DV V SLI Y K G E S +F++L NI +++ GYA+NG G
Sbjct: 447 KSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMG 501
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 111/264 (42%), Gaps = 35/264 (13%)
Query: 67 HMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLA----SKIRPNEFTFGTVLHSS 122
MFD + S + G + +EDA LF ML + + G VL +
Sbjct: 144 QMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKAC 203
Query: 123 TVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYT 182
++R+ +G+Q+HA K+G F+ D Y+ S I Y
Sbjct: 204 AMIRDFELGKQVHALCHKLG-----FIDEE--DSYLSGSLIR---------------FYG 241
Query: 183 ALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
C EDA V H++ N V+W A V + G +E + FI+M G
Sbjct: 242 EFRC-------LEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKK 294
Query: 243 TESTFPSVITAAAKIAALGM-GKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
S F +V+ A + ++ G G++ HA AIK + D + LI Y K G ++D+ +
Sbjct: 295 NVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKV 354
Query: 302 FNKLLKRNIVSC-NAVVCGYAQNG 324
F VSC NA+V Y QNG
Sbjct: 355 FKSSKDETSVSCWNAMVASYMQNG 378
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 133 QLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRG 192
+++C K N G+ L +++ S+I P + L+ ++ G
Sbjct: 89 DIYSCLAKESARENDQRGAHELQVHIMKSSIR-----------PTITFINRLLLMHVSCG 137
Query: 193 RFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE----GFIPTESTFP 248
R + Q+F MP R+ SW + GC + G E+A F+ ML+ F
Sbjct: 138 RLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILG 197
Query: 249 SVITAAAKIAALGMGKRFHACAIKC--LGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
V+ A A I +GK+ HA K + + D ++ SLI FY + +ED+ L+ ++L
Sbjct: 198 CVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLS 257
Query: 307 KRNIVSCNAVVCGYAQNG 324
N V+ A V + G
Sbjct: 258 NANTVAWAAKVTNDYREG 275
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 141/337 (41%), Gaps = 28/337 (8%)
Query: 8 LVSRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTF----- 62
+V R P +T+ VV + +L K E ++ D++ + +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 63 -QVACHMFDEISD-------LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFT 114
A ++F E+ +T S + +C + + DA L S M+ KI PN T
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVT 332
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF---- 170
F ++ + V +L+ K + ++F ++L++ + +++A++ F
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNE 226
P+VV+Y L+ G+ K R ED ++F EM R + V++ ++ G G +
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 227 EAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLI 286
A F M+ +G P T+ ++ L K KLD+++ ++I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 287 SFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCG 319
K G ++D +F L +K N+V+ N ++ G
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 119/287 (41%), Gaps = 26/287 (9%)
Query: 60 TTFQVACHMFDEISDLTGESATTIICGFAKRHCH----EDAIHLFSRMLASKIRPNEFTF 115
+ +A + ++ L E + + +CH DA+ L +M+ RP+ TF
Sbjct: 134 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 116 GTVLH---------SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEA 166
T++H + L + ++ R G+ N DL + L EA
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
Query: 167 QKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQT 222
K D VV + ++ K +DAL +F EM + NVV++++++
Sbjct: 254 AKIEAD-----VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
G +A DM+ + P TF ++I A K ++ + IK D+F
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 283 NSLISFYAKCGSMEDSLLMFNKLLKR----NIVSCNAVVCGYAQNGR 325
NSL++ + ++ + MF ++ + ++V+ N ++ G+ ++ R
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I GF K ED LF M + + T+ T++ + +++
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP----NVVSYTALVCGYLKRGRFED 196
G+ ++ S LLD +E+A + F Q ++ YT ++ G K G+ +D
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
+F + + NVV++N M+ G +EA M +G +P T+ ++I
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 253 A 253
A
Sbjct: 584 A 584
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 135/291 (46%), Gaps = 20/291 (6%)
Query: 28 ITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESAT-----T 82
+TK + H + +V + + GL +VA + + D G + T
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLD-CGPAPNVVTFCT 291
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I GF KR + A LF M I P+ + T++ + +G +L + A G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 143 LASNVFVGSALLDLYVKLSTIEEA----QKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
+ +V V S+ +D+YVK + A ++ PNVV+YT L+ G + GR +A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 199 QVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
++ ++ +R ++V++++++ G + G+ + DM++ G+ P + ++
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 255 AKIAALGMGKRFHACAIKCLG---KLDVFVGNSLISFYAKCGSMEDSLLMF 302
+K + RF ++K LG +L+V V NSLI + + +++L +F
Sbjct: 472 SKQGLMLHAMRF---SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 12/252 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I G + +A ++ ++L + P+ T+ +++ N+ G L+ K
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 141 IGLASNVFVGSALLDLYVK----LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFED 196
+G +V + L+D K L + + K G + NVV + +L+ G+ + RF++
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 197 ALQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
AL+VF M + +V ++ ++ G EEA+ F M + G P + ++I
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKR 308
A K +G + + D+ V N +I KC +ED+ FN L ++
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 309 NIVSCNAVVCGY 320
+IV+ N ++CGY
Sbjct: 635 DIVTYNTMICGY 646
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+ICG+ ++A +F + + PN T ++H ++ ++ + +
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
G N L+D + K IE + K F + Q P++VSY+ ++ G KRGR ++
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 759
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
A +FH+ + +VV++ ++ G + G EA + MLR G P +
Sbjct: 760 ATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 104/260 (40%), Gaps = 43/260 (16%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
E+A+ LF RM + P+ + T++ + IG QL + +++++ V + +
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 154 LDLYVKLSTIEEAQKAFGD----TQHPNVVSYTALVCGYLKRGRFED------------- 196
+ L K IE+A K F + P++V+Y ++CGY R ++
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 197 ----------------------ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVN 230
A+++F M E+ N V++ ++ S++ E +
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727
Query: 231 FFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYA 290
F +M +G P+ ++ +I K + AI DV LI Y
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 787
Query: 291 KCGSMEDSLLMFNKLLKRNI 310
K G + ++ L++ +L+ +
Sbjct: 788 KVGRLVEAALLYEHMLRNGV 807
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
P NVV++ ++ G + G + A + F M + G P + ++I K LGMG
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL----KRNIVSCNAVVCGY 320
+ + A+ KLDV V +S I Y K G + + +++ ++L N+V+ ++ G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 321 AQNGR 325
Q+GR
Sbjct: 402 CQDGR 406
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 92 CH--EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFV 149
CH EDA F+ ++ K+ P+ T+ T++ LR + ++ N
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 150 GSALLDLYVKLSTIEEAQKAFG----DTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
+ L+ + K + ++ A + F PN V+Y L+ + K E + ++F EM
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 206 ER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
E+ ++VS++ ++ G + G +EA N F + +P + +I K+ L
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TII G K +DA LF++M I+P+ FT+ ++ +L + +
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGD---TQH--PNVVSYTALVCGYLKRGRFE 195
+ ++ +AL+D +VK + EA+K + + ++H P+VV+Y L+ G+ K R E
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 196 DALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
+ ++VF EM +R N V++ ++ G Q + A F M+ +G P T+ ++
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 252 TAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LK 307
+ K KLD+ ++I K G +ED +F L +K
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Query: 308 RNIVSCNAVVCGYAQNG 324
N+V+ ++ G+ + G
Sbjct: 494 PNVVTYTTMMSGFCRKG 510
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I GF K E+ + +F M + N T+ T++H R+ + +
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPN----VVSYTALVCGYLKRGRFED 196
G+ ++ + LLD +E A F Q + +V+YT ++ K G+ ED
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
+F + + NVV++ M+ G + G EEA F++M +G +P T+ ++I
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539
Query: 253 A 253
A
Sbjct: 540 A 540
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 13/193 (6%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TT++ G + + +A+ L RM+ +P+ T+G V++ + L K
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFED 196
+ ++V + + ++D K +++A F + P+V +Y L+ GR+ D
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 197 ALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A ++ +M E+N+ V +NA++ + G EA + +M++ ++ FP V+
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK-----SKHCFPDVVA 358
Query: 253 AAAKIAALGMGKR 265
I KR
Sbjct: 359 YNTLIKGFCKYKR 371
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 135/291 (46%), Gaps = 20/291 (6%)
Query: 28 ITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESAT-----T 82
+TK + H + +V + + GL +VA + + D G + T
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLD-CGPAPNVVTFCT 291
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I GF KR + A LF M I P+ + T++ + +G +L + A G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 143 LASNVFVGSALLDLYVKLSTIEEA----QKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
+ +V V S+ +D+YVK + A ++ PNVV+YT L+ G + GR +A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 199 QVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
++ ++ +R ++V++++++ G + G+ + DM++ G+ P + ++
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 255 AKIAALGMGKRFHACAIKCLG---KLDVFVGNSLISFYAKCGSMEDSLLMF 302
+K + RF ++K LG +L+V V NSLI + + +++L +F
Sbjct: 472 SKQGLMLHAMRF---SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+ICG+ ++A +F + + PN T ++H ++ ++ + +
Sbjct: 611 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 670
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
G N L+D + K IE + K F + Q P++VSY+ ++ G KRGR ++
Sbjct: 671 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 730
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
A +FH+ + +VV++ ++ G + G EA + MLR G P +
Sbjct: 731 ATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 18/240 (7%)
Query: 99 LFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYV 158
++ RML I PN T+ ++ + ++ K G+ ++ S+L+D +
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 159 KLSTIEEAQKAFGDT----QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVV 210
K + + D P+VV Y LV G K+G A++ +M + NVV
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 211 SWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL------GMGK 264
+N+++ G + +EA+ F M G P +TF +V+ + A +G
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGY 320
+ + D+ V N +I KC +ED+ FN L ++ +IV+ N ++CGY
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 205 PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGK 264
P NVV++ ++ G + G + A + F M + G P + ++I K LGMG
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 265 RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLL----KRNIVSCNAVVCGY 320
+ + A+ KLDV V +S I Y K G + + +++ ++L N+V+ ++ G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 321 AQNGR 325
Q+GR
Sbjct: 402 CQDGR 406
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 113/279 (40%), Gaps = 49/279 (17%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLR------NVVIGRQL 134
++I G+ + + ++A+ +F M I+P+ TF TV+ S + IG QL
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559
Query: 135 HACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGD----TQHPNVVSYTALVCGYLK 190
+ +++++ V + ++ L K IE+A K F + P++V+Y ++CGY
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 619
Query: 191 RGRFED-----------------------------------ALQVFHEMPER----NVVS 211
R ++ A+++F M E+ N V+
Sbjct: 620 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 679
Query: 212 WNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAI 271
+ ++ S++ E + F +M +G P+ ++ +I K + AI
Sbjct: 680 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
DV LI Y K G + ++ L++ +L+ +
Sbjct: 740 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 12/256 (4%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
T++ G DA+ L RM+ + +PNE T+G VL+ + +L +
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDA 197
+ + S ++D K +++ A F + + ++++Y L+ G+ GR++D
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 198 LQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA 253
++ +M +R NVV+++ ++ + G EA +M++ G P T+ S+I
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 254 AAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR----N 309
K L + I D+ N LI+ Y K ++D L +F ++ R N
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 310 IVSCNAVVCGYAQNGR 325
V+ N +V G+ Q+G+
Sbjct: 438 TVTYNTLVQGFCQSGK 453
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 38 SLATKHENTVVQKDIIPYGL------DPTTFQVACHMFDEISDLTGESA-----TTIICG 86
L K E ++ D + Y + + A ++F+E+ ++ G A T+I G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGG 307
Query: 87 FAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN 146
F +D L M+ KI PN TF ++ S + QL + G+A N
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 147 VFVGSALLDLYVKLSTIEEAQKA----FGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
++L+D + K + +EEA + P+++++ L+ GY K R +D L++F
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 203 EMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
EM R N V++N +V G Q+G E A F +M+ P
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 12/244 (4%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
+DA+ LF M+ S+ P F + + + + L G+A +++ S +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 154 LDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMPER-- 207
++ + + + A G P+ V + L+ G R +AL++ M E
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 208 --NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
+++ N +V G G +AV M+ GF P E T+ V+ K +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYA 321
+ KLD + +I K GS++++ +FN++ K +I++ N ++ G+
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 322 QNGR 325
GR
Sbjct: 310 NAGR 313
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 140/337 (41%), Gaps = 28/337 (8%)
Query: 8 LVSRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTF----- 62
+V R P +T+ VV + +L K E ++ D++ + +
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 63 -QVACHMFDEISD-------LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFT 114
A ++F E+ +T S + +C + + DA L S M+ KI PN T
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVT 257
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF---- 170
F ++ + V +LH K + ++F ++L++ + +++A++ F
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNE 226
P++ +Y L+ G+ K R ED ++F EM R + V++ ++ G G +
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 227 EAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLI 286
A F M+ +G P T+ ++ L K KLD+++ ++I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 287 SFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCG 319
K G ++D +F L +K N+V+ N ++ G
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 26/287 (9%)
Query: 60 TTFQVACHMFDEISDLTGESATTIICGFAKRHCH----EDAIHLFSRMLASKIRPNEFTF 115
+ +A + ++ L E + + +CH DA+ L +M+ RP+ TF
Sbjct: 59 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 116 GTVLH---------SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEA 166
T++H + L + ++ R G+ N +DL L EA
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 167 QKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQT 222
K D VV + ++ K +DAL +F EM + NVV++++++
Sbjct: 179 AKIEAD-----VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
G +A DM+ + P TF ++I A K ++ H IK D+F
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 283 NSLISFYAKCGSMEDSLLMFNKLLKR----NIVSCNAVVCGYAQNGR 325
NSLI+ + ++ + MF ++ + ++ + N ++ G+ ++ R
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 78 ESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHAC 137
++ T+I GF K ED LF M + + T+ T++ + +++
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP----NVVSYTALVCGYLKRGR 193
G+ ++ S LLD +E+A + F Q ++ YT ++ G K G+
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 194 FEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
+D +F + + NVV++N M+ G +EA M +G +P T+ +
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 250 VITA----AAKIAALGMGKRFHAC 269
+I A K A+ + + +C
Sbjct: 506 LIRAHLRDGDKAASAELIREMRSC 529
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 145/342 (42%), Gaps = 28/342 (8%)
Query: 8 LVSRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTF----- 62
+V R P +T+ VV + +L K E ++ +++ Y +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 63 -QVACHMFDEISD-------LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFT 114
A ++F E+ + +T S + +C + + DA L S M+ KI PN T
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYER---WSDASRLLSDMIERKINPNVVT 332
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF---- 170
F ++ + +V +L+ K + ++F S+L++ + ++EA+ F
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 171 GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNE 226
PNVV+Y L+ G+ K R ++ +++F EM +R N V++ ++ G Q +
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 227 EAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLI 286
A F M+ +G P T+ +++ K L + + ++ N +I
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 287 SFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYAQNG 324
K G +ED +F L +K +++ N ++ G+ + G
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 119/287 (41%), Gaps = 26/287 (9%)
Query: 60 TTFQVACHMFDEISDLTGESATTIICGFAKRHCH----EDAIHLFSRMLASKIRPNEFTF 115
+ +A + ++ L E + + +CH DA+ L +M+ RP+ TF
Sbjct: 134 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 116 GTVLH---------SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEA 166
T++H + L + ++ R G+ N +DL L EA
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
Query: 167 QKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQT 222
K NVV Y+ ++ K +DAL +F EM + NV+++++++
Sbjct: 254 AKI-----EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
+A DM+ P TF ++I A K L ++ + IK D+F
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 283 NSLISFYAKCGSMEDSLLMFNKLLKR----NIVSCNAVVCGYAQNGR 325
+SLI+ + ++++ MF ++ + N+V+ N ++ G+ + R
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 8/174 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I GF K ++ + LF M + N T+ T++H R+ + +
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFED 196
G+ N+ + LLD K +E+A F Q P + +Y ++ G K G+ ED
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTEST 246
+F + + +V+ +N M+ G + G EEA F M +G +P T
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 113/248 (45%), Gaps = 23/248 (9%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
+DAI LF M+ S+ P+ F F +L + ++ + L ++G++ N++ + L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 154 LDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMPER-- 207
++ + + S I A G P++V+ ++L+ GY R DA+ + +M E
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 208 --NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA----ALG 261
+ +++ ++ G EAV M++ G P T+ V+ K A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 262 MGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF----NKLLKRNIVSCNAVV 317
+ + A I+ +V + +++I K +D+L +F NK ++ N+++ ++++
Sbjct: 247 LLNKMEAAKIEA----NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 318 ---CGYAQ 322
C Y +
Sbjct: 303 SCLCNYER 310
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 19/269 (7%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVV---IGRQLHACAT 139
+I +AK E A+ F RM RP+ FT+ +L ++R V + ++
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR--VMMREEVFFMLAFAVYNEML 190
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFE 195
K + N++ L+D K +AQK F D PN V+YT L+ G +RG +
Sbjct: 191 KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD 250
Query: 196 DALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
DA ++F+EM + V+ NA++ G + G EA ++GF+ + S+I
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 252 TAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI- 310
+ +A +K K D+ + LI +K G +ED+L + + + + I
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 311 --VSC-NAVVCGYAQNGRGGFTSWATLGL 336
C NAV+ A GRG +L L
Sbjct: 371 PDTYCYNAVI--KALCGRGLLEEGRSLQL 397
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 18/256 (7%)
Query: 65 ACHMFDEISDLTGE-------SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
A MFD D+TG + T +I G +R +DA LF M S P+
Sbjct: 217 AQKMFD---DMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH-- 175
+L L +V +L K G + S+L+D + +A + + +
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333
Query: 176 --PNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVS----WNAMVGGCSQTGHNEEAV 229
P+++ YT L+ G K G+ EDAL++ MP + + +NA++ G EE
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGR 393
Query: 230 NFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFY 289
+ ++M P T +I + + + + K V N+LI
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Query: 290 AKCGSMEDSLLMFNKL 305
K G ++++ L+ +K+
Sbjct: 454 CKSGELKEARLLLHKM 469
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 145/346 (41%), Gaps = 32/346 (9%)
Query: 8 LVSRLSV----PTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGL------ 57
LV R+ V P +T+ +V + SL K E ++ ++ Y
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 58 DPTTFQVACHMFDEISD-------LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRP 110
+ A ++F E+ + +T S +C + + DA L S M+ KI P
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR---WSDASRLLSDMIERKINP 324
Query: 111 NEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF 170
N TF ++ + +V +L+ K + ++F S+L++ + ++EA+ F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 171 ----GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQT 222
PNVV+Y L+ G+ K R ++ +++F EM +R N V++ ++ G Q
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 223 GHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
+ A F M+ +G +P T+ ++ + + + D++
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 283 NSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYAQNG 324
N +I K G +ED +F L +K N+V+ ++ G+ + G
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 26/264 (9%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS-----------STVLRNVV 129
+++ GF + DA+ L +M+ +P+ FTF T++H + V R VV
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 130 IGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYL 189
G Q G+ N +DL + L E K P VV Y ++
Sbjct: 215 KGCQPDLVT--YGIVVNGLCKRGDIDLALSLLKKMEQGKI-----EPGVVIYNTIIDALC 267
Query: 190 KRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
DAL +F EM + NVV++N+++ G +A DM+ P
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 246 TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
TF ++I A K L ++ + IK D+F +SLI+ + ++++ MF +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 306 LKR----NIVSCNAVVCGYAQNGR 325
+ + N+V+ N ++ G+ + R
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKR 411
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 12/201 (5%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I GF K ++ + LF M + N T+ T++H R + +
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFED 196
G+ ++ S LLD +E A F Q P++ +Y ++ G K G+ ED
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
+F + + NVV++ M+ G + G EEA F +M EG +P T+ ++I
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 253 A----AAKIAALGMGKRFHAC 269
A K A+ + + +C
Sbjct: 580 AHLRDGDKAASAELIREMRSC 600
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 112/250 (44%), Gaps = 27/250 (10%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
+DA++LF M+ S+ P+ F +L + + + L +G++ N++ S L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 154 LDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMPER-- 207
++ + + S + A P++V+ +L+ G+ R DA+ + +M E
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 208 --NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA----ALG 261
+ ++N ++ G + EAV M+ +G P T+ V+ K AL
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 262 MGKRFHACAIKCLGKLD--VFVGNSLISFYAKCGSMEDSLLMF----NKLLKRNIVSCNA 315
+ K+ GK++ V + N++I ++ D+L +F NK ++ N+V+ N+
Sbjct: 243 LLKKMEQ------GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 316 VV---CGYAQ 322
++ C Y +
Sbjct: 297 LIRCLCNYGR 306
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 93/178 (52%), Gaps = 4/178 (2%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
AC +F+ IS+ + +++I G+++ H++A+HLF+ + S +P+ VL S
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAE 320
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
L + V G+++H+ ++GL ++ V SAL+D+Y K ++ A F N+VS+ +L
Sbjct: 321 LSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSL 380
Query: 185 VCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLRE 238
+ G G A + F E+ E + ++++A++ C +G + F M E
Sbjct: 381 ILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 34/268 (12%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
A +F I D +I G+ + I+LF+ M +PN +T +
Sbjct: 160 ASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLID 219
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTAL 184
+++ +HA KI L S+ +VG AL+++Y + I
Sbjct: 220 PSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA-------------------- 259
Query: 185 VCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTE 244
A VF+ + E ++V+ ++++ G S+ G+++EA++ F ++ G P
Sbjct: 260 -----------SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDC 308
Query: 245 STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNK 304
V+ + A+++ GK H+ I+ +LD+ V ++LI Y+KCG ++ ++ +F
Sbjct: 309 VLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAG 368
Query: 305 LLKRNIVSCNAVVCGYAQNGRGGFTSWA 332
+ ++NIVS N+++ G G GF S A
Sbjct: 369 IPEKNIVSFNSLILGL---GLHGFASTA 393
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 114/257 (44%), Gaps = 31/257 (12%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRN 127
+FD + + +II +AK H + LFS++L S RP+ FT+ + + +
Sbjct: 62 LFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFD 121
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCG 187
R +H A GL + GSA++ Y K I EA K F P++ + ++ G
Sbjct: 122 TKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILG 181
Query: 188 YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
Y G ++ + +F+ M R GH + + L G I
Sbjct: 182 YGCCGFWDKGINLFNLMQHR---------------GHQPNC--YTMVALTSGLID----- 219
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
PS++ A + HA +K +VG +L++ Y++C + + +FN + +
Sbjct: 220 PSLLLVAWSV---------HAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE 270
Query: 308 RNIVSCNAVVCGYAQNG 324
++V+C++++ GY++ G
Sbjct: 271 PDLVACSSLITGYSRCG 287
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 21/281 (7%)
Query: 65 ACHMFDEISD--LTGESAT--TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
AC + + D + G++ T ++ G K +DA +F M I P+ F++G +++
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HP 176
+ L N+ + + GL NV + + LL + + IE+A++ + HP
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVS----WNAMVGGCSQTGHNEEAVNFF 232
N V+Y ++ GY K G +A ++F EM + +V + +V GC + E A+ F
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAALGMG----KRFHACAIKCLGKLDVFVGNSLISF 288
++G + + F ++I K + R + GK + N +I +
Sbjct: 756 -GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 289 YAKCGSMEDSLLMFNKLLKRN----IVSCNAVVCGYAQNGR 325
K G++E + +F+++ N +++ +++ GY + GR
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 106/236 (44%), Gaps = 8/236 (3%)
Query: 84 ICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGL 143
IC +K E A LF M+AS + P + +++ +NV G +L K +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 144 ASNVFVGSALLDLYVKLSTIEEA----QKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQ 199
+ + ++ ++ A ++ PNVV YT L+ +L+ RF DA++
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 200 VFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAA 255
V EM E+ ++ +N+++ G S+ +EA +F ++M+ G P T+ + I+
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 256 KIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
+ + ++ +C + + LI+ Y K G + ++ + ++ + I+
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 107/240 (44%), Gaps = 10/240 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
++I G +K ++A M+ + ++PN FT+G + + +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVV----SYTALVCGYLKRGRFED 196
G+ N + + L++ Y K + EA A+ ++ +YT L+ G K + +D
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A ++F EM + +V S+ ++ G S+ G+ ++A + F +M+ EG P + ++
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 253 AAAKIAALGMGKR-FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
+ + K ++K L + ++I Y K G + ++ +F+++ + +V
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHP-NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 20/233 (8%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACAT-K 140
TII G+ K +A LF M + P+ F + T++ L +V R + T K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV--ERAITIFGTNK 759
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQK--------AFGDTQHPNVVSYTALVCGYLKRG 192
G AS+ +AL++ K E + +F PN V+Y ++ K G
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 193 RFEDALQVFHEMPERN----VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFP 248
E A ++FH+M N V+++ +++ G + G E F + + G P +
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 249 SVITAAAK-----IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSME 296
+I A K A + + + F A+ KL + +L+S +AK G ME
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 109/256 (42%), Gaps = 12/256 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TT+I F + DA+ + M I P+ F + +++ + + + R +
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
GL N F A + Y++ S A K + + PN V T L+ Y K+G+ +
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 197 ALQVFHEMPERNVV----SWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A + M ++ ++ ++ ++ G + ++A F +M +G P ++ +I
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKR 308
+K+ + ++ +V + N L+ + + G +E + + +++ L
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 309 NIVSCNAVVCGYAQNG 324
N V+ ++ GY ++G
Sbjct: 696 NAVTYCTIIDGYCKSG 711
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 117/259 (45%), Gaps = 18/259 (6%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA--T 139
T++ G + A ++ M+AS RPN + T++ T L+N G +
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK--TFLQNSRFGDAMRVLKEMK 479
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQ----KAFGDTQHPNVVSYTALVCGYLKRGRFE 195
+ G+A ++F ++L+ K ++EA+ + + PN +Y A + GY++ F
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 196 DALQVFHEMPE----RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
A + EM E N V ++ + G EA + + M+ +G + T+ ++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 252 TAAAKIAALGMGKR-FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR-- 308
K + + F K + DVF LI+ ++K G+M+ + +F+++++
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAP-DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 309 --NIVSCNAVVCGYAQNGR 325
N++ N ++ G+ ++G
Sbjct: 659 TPNVIIYNMLLGGFCRSGE 677
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 12/259 (4%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
+ +T+I G + +A+ L RM+ +P+E T+G VL+ N + L
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRF 194
+ + ++V S ++D K + ++A F + + +VV+Y++L+ G G++
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 195 EDALQVFHEMPERN----VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSV 250
+D ++ EM RN VV+++A++ + G EA + +M+ G P T+ S+
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 251 ITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----L 306
I K L + + + D+ + LI+ Y K ++D + +F ++ L
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 307 KRNIVSCNAVVCGYAQNGR 325
N ++ N +V G+ Q+G+
Sbjct: 417 IPNTITYNTLVLGFCQSGK 435
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 86/215 (40%), Gaps = 43/215 (20%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
++I GF K +C +A +F M++ P+ T+ +++S + V G +L +
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDA 197
GL N + L+ + + + A++ F + P+VV+Y L+ G G A
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 198 LQVFHEMPER---------------------------------------NVVSWNAMVGG 218
L++F +M + +VV++N M+GG
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 219 CSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA 253
+ G EA F M +G P + T+ +I A
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 10/234 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+ +I F K +A L++ M+ I P+ T+ +++ + Q+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
G ++ S L++ Y K +++ + F + PN ++Y LV G+ + G+
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A ++F EM R +VV++ ++ G G +A+ F M + + +I
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 253 AAAKIAALGMGKRFHACAIKCLG-KLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
+ + C++ G K DV N +I K GS+ ++ ++F K+
Sbjct: 499 GMCNASKVDDAWSLF-CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 8/231 (3%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
++I G+ K + E A+ L S M AS + PN TF T++ +R++ L+ T
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFED 196
G+ +V +AL+D + K + ++EA + + D HPN ++ LV G+ K GR
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A+ + E ++ N V + ++ G Q G+ A FF DM G P ++ S++
Sbjct: 533 AIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLK 592
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
+ + IK ++ V L FY G ++ + + N
Sbjct: 593 GHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTN 643
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 152/354 (42%), Gaps = 53/354 (14%)
Query: 17 WITHQVVSCRYITKTVHTHY--------HSLATKHENTVVQKDIIPYGLDPTTFQVACHM 68
W+ +Q++ R + VH ++ L +K E + ++ G+ P + ++
Sbjct: 184 WVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLL--DEMTSLGIKPNVYIYTIYI 241
Query: 69 FDEISDLTGESA-------------------TTIICGFAKRHCHEDAIHLFSRMLASKIR 109
D D E A + +I G+ K A L+ +L +++
Sbjct: 242 LDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELL 301
Query: 110 PNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKA 169
PN FGT++ R +V R L K G+ N++V + L+ + K + EA
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 170 FGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQ 221
+ + P+V +YT L+ G + +A ++F +M + ++N+++ G +
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 222 TGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKI----AALGMGKRFHACAIKCLGKL 277
+ E+A++ +M G P TF ++I + AA+G+ + IK +
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL---YFEMTIKGIVP- 477
Query: 278 DVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI------VSCNAVVCGYAQNGR 325
DV +LI + K +M+++L +++ +L+ I +C +V G+ + GR
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC--LVDGFWKEGR 529
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 43/266 (16%)
Query: 68 MFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKI--RPNEFTFGTVLHSSTVL 125
+FDE+ + S ++I G++ R + SRM+ S++ RPNE TF +++ +
Sbjct: 88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147
Query: 126 RNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALV 185
+ GR +H K G+ V V +A ++ Y K
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKT------------------------- 182
Query: 186 CGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
G + ++F ++ +N+VSWN M+ Q G E+ + +F R G P ++
Sbjct: 183 ------GDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQA 236
Query: 246 TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN-----SLISFYAKCGSMEDSLL 300
TF +V+ + + + + + H + F GN +L+ Y+K G +EDS
Sbjct: 237 TFLAVLRSCEDMGVVRLAQGIHGLIM-----FGGFSGNKCITTALLDLYSKLGRLEDSST 291
Query: 301 MFNKLLKRNIVSCNAVVCGYAQNGRG 326
+F+++ + ++ A++ YA +G G
Sbjct: 292 VFHEITSPDSMAWTAMLAAYATHGFG 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDML--REGFI 241
LV YL+ G A ++F EMPER++VSWN+++ G S G+ + M+ GF
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 242 PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLM 301
P E TF S+I+A + G+ H +K +V V N+ I++Y K G + S +
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 302 FNKLLKRNIVSCNAVVCGYAQNG 324
F L +N+VS N ++ + QNG
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNG 214
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 5/210 (2%)
Query: 30 KTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAK 89
+ +H E VV I YG +C +F+++S S T+I +
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYG-KTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQ 212
Query: 90 RHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFV 149
E + F+ P++ TF VL S + V + + +H G + N +
Sbjct: 213 NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCI 272
Query: 150 GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
+ALLDLY KL +E++ F + P+ +++TA++ Y G DA++ F M +
Sbjct: 273 TTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGI 332
Query: 210 ----VSWNAMVGGCSQTGHNEEAVNFFIDM 235
V++ ++ CS +G EE ++F M
Sbjct: 333 SPDHVTFTHLLNACSHSGLVEEGKHYFETM 362
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 13/154 (8%)
Query: 175 HP-----NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAV 229
HP NV+ L+ Y K G A QVF MPERNVVSW A++ G Q G+ +E
Sbjct: 88 HPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGF 147
Query: 230 NFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFY 289
F ML F P E T SV+T+ GK+ H A+K ++V N++IS Y
Sbjct: 148 CLFSSMLSHCF-PNEFTLSSVLTS----CRYEPGKQVHGLALKLGLHCSIYVANAVISMY 202
Query: 290 AKC---GSMEDSLLMFNKLLKRNIVSCNAVVCGY 320
+C + ++ +F + +N+V+ N+++ +
Sbjct: 203 GRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 7/185 (3%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
II FA + E AIHLF ++ K+ P+ +TF +VL + L +HA K G
Sbjct: 341 IITAFAV-YDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGG 399
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
++ + ++L+ Y K +++ + F D +VVS+ +++ Y G+ + L VF
Sbjct: 400 FLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQ 459
Query: 203 EMP-ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALG 261
+M + ++ A++ CS G EE + F M + T P + A I L
Sbjct: 460 KMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEK-----PETLPQLNHYACVIDMLS 514
Query: 262 MGKRF 266
+RF
Sbjct: 515 RAERF 519
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 135/314 (42%), Gaps = 41/314 (13%)
Query: 22 VVSCRYIT-KTVHTHYHSLATKHENTVVQKDIIPYGL--DPTTFQVACHMFDEISDLTGE 78
+ SCRY K VH L V I YG D A +F+ I
Sbjct: 168 LTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLV 227
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTF----GTVLHSSTVLRNVVIG--R 132
+ ++I F + + AI +F RM + + + T ++ SS ++ N V
Sbjct: 228 TWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCL 287
Query: 133 QLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRG 192
QLH+ K GL + V +AL+ +Y ++ +E+
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVYSEM--LED--------------------------- 318
Query: 193 RFEDALQVFHEMPE-RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
+ D ++F EM R++V+WN ++ + E A++ F + +E P TF SV+
Sbjct: 319 -YTDCYKLFMEMSHCRDIVAWNGIITAFA-VYDPERAIHLFGQLRQEKLSPDWYTFSSVL 376
Query: 252 TAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
A A + HA IK D + NSLI YAKCGS++ + +F+ + R++V
Sbjct: 377 KACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVV 436
Query: 312 SCNAVVCGYAQNGR 325
S N+++ Y+ +G+
Sbjct: 437 SWNSMLKAYSLHGQ 450
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 48/309 (15%)
Query: 26 RYITKTVHTHYHSLATKH---ENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATT 82
R + ++ H+H L+ + +N ++ +I A +FD + + S T
Sbjct: 73 RNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTA 132
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I G+ + ++ LFS ML S PNEFT +VL S G+Q+H A K+G
Sbjct: 133 LITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLG 187
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
L +++V +A++ +Y + H +Y +A VF
Sbjct: 188 LHCSIYVANAVISMYGRC--------------HDGAAAY--------------EAWTVFE 219
Query: 203 EMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGM 262
+ +N+V+WN+M+ ++A+ F+ M +G +T ++ ++ K + L
Sbjct: 220 AIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVP 279
Query: 263 GK------RFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK----RNIVS 312
+ + H+ +K V +LI Y++ +ED + ++ R+IV+
Sbjct: 280 NEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVA 337
Query: 313 CNAVVCGYA 321
N ++ +A
Sbjct: 338 WNGIITAFA 346
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 112/252 (44%), Gaps = 51/252 (20%)
Query: 87 FAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGR--QLHACATKIGLA 144
+ K H ++A+ + + M+ + P+ T+ +++ S R+ ++ +L + G
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI--SAYARDGMLDEAMELKNQMAEKGTK 381
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDALQV 200
+VF + LL + + +E A F + ++ PN+ ++ A + Y RG+F + +++
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 201 FHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
F E+ ++V+WN ++ Q G + E F +M R GF+P TF
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF--------- 492
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK----RNIVS 312
N+LIS Y++CGS E ++ ++ ++L ++ +
Sbjct: 493 --------------------------NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 313 CNAVVCGYAQNG 324
N V+ A+ G
Sbjct: 527 YNTVLAALARGG 538
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 118/282 (41%), Gaps = 31/282 (10%)
Query: 68 MFDEISDLTGESA-----------TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFG 116
M DE +L + A TT++ GF + E A+ +F M + +PN TF
Sbjct: 364 MLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFN 423
Query: 117 TVL----HSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGD 172
+ + + I +++ C GL+ ++ + LL ++ + E F +
Sbjct: 424 AFIKMYGNRGKFTEMMKIFDEINVC----GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 173 TQH----PNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVV----SWNAMVGGCSQTGH 224
+ P ++ L+ Y + G FE A+ V+ M + V ++N ++ ++ G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNS 284
E++ +M P E T+ S++ A A +G+ + + + +
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 285 LISFYAKCGSMEDSLLMFNKLLKR----NIVSCNAVVCGYAQ 322
L+ +KC + ++ F++L +R +I + N++V Y +
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR 641
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 176 PNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNF 231
P+++SY ++ Y + R DA ++F EM +V+++N +G + EEA+
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 232 FIDMLREGFIPTESTFPSVITAAAKIAALGMGKRF 266
M++ G P ++T+ S++ K+ K F
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 2 RTHMKNLVSRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGL---- 57
R + LV++ VP T+ ++ Y ++L + V+ D++ Y +
Sbjct: 620 REFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Query: 58 DPT-TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIH----LFSRMLASKIRPNE 112
DP + FD I D+ TI+ R+CH + + LF M +I P+
Sbjct: 680 DPELDMKREMEAFDVIPDVV---YYTIMIN---RYCHLNDLKKVYALFKDMKRREIVPDV 733
Query: 113 FTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGD 172
T+ TVL + RN + R++ A K +VF + L+D K+ + EA++ F
Sbjct: 734 VTY-TVLLKNKPERN--LSREMKAFDVK----PDVFYYTVLIDWQCKIGDLGEAKRIFDQ 786
Query: 173 TQH----PNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGH 224
P+ YTAL+ K G ++A +F M E +VV + A++ GC + G
Sbjct: 787 MIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGF 846
Query: 225 NEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
+AV +ML +G PT+++ +V A K L
Sbjct: 847 VLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAKGL 882
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 8/195 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+ II G K A+ +F++ML + R N ++L + N L +
Sbjct: 330 SAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRE 389
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAF----GDTQHPNVVSYTALVCGYLKRGRFED 196
++ + + D KL +EEA + F G P+V++YT L+ G +G+ D
Sbjct: 390 TNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSD 449
Query: 197 ALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A + EM ++V +N + GG + G +EA M G PT T VI
Sbjct: 450 AFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE 509
Query: 253 AAAKIAALGMGKRFH 267
L + F+
Sbjct: 510 GLIDAGELDKAEAFY 524
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 65 ACHMFDEISD----LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
A M DE+ + L + +I GF KR E A LFS +L + P++ + +++
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS 697
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----P 176
L N+V L+ K GL ++ + L+D +K + A + + + Q P
Sbjct: 698 GFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVP 757
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVS----WNAMVGGCSQTGHNEEAVNFF 232
+ + YT +V G K+G+F +++F EM + NV +NA++ G + G+ +EA
Sbjct: 758 DEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLH 817
Query: 233 IDMLREGFIPTESTFPSVITA 253
+ML +G +P +TF +++
Sbjct: 818 DEMLDKGILPDGATFDILVSG 838
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 120/262 (45%), Gaps = 33/262 (12%)
Query: 47 VVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLAS 106
+V +I+ GL P + + + +I G + H ++A+ + + M +S
Sbjct: 499 IVFSNILEKGLKPNNY----------------TYSILIDGCFRNHDEQNALEVVNHMTSS 542
Query: 107 KIRPNEFTFGTVLHSSTVLRNVVIGRQLHA-CATKIGLASNVFVGSALLDLYVKLSTIEE 165
I N + T+++ + R+L A + L + ++++D + K ++
Sbjct: 543 NIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDS 602
Query: 166 AQKAF----GDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVG 217
A A+ G+ PNV++YT+L+ G K R + AL++ EM + ++ ++ A++
Sbjct: 603 AVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID 662
Query: 218 GCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA----AAKIAALGMGKRFHACAIKC 273
G + + E A F ++L EG P++ + S+I+ +AAL + K+ ++C
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 274 LGKLDVFVGNSLISFYAKCGSM 295
D+ +LI K G++
Sbjct: 723 ----DLGTYTTLIDGLLKDGNL 740
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 41/305 (13%)
Query: 56 GLDPTTFQV---------------ACHMFDEISDLTGESA----TTIICGFAKRHCHEDA 96
GL P+ F V A +FDE S TG + TI+ K+ ++A
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEA 462
Query: 97 IHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDL 156
L S+M + I PN ++ V+ +N+ + R + + + GL N + S L+D
Sbjct: 463 TELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Query: 157 YVKLSTIEEAQKAFGDTQHPNV----VSYTALVCGYLKRGRFEDALQVFHEMPER----- 207
+ + A + N+ V Y ++ G K G+ A ++ M E
Sbjct: 523 CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCV 582
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK----IAALGMG 263
+ +S+N+++ G + G + AV + +M G P T+ S++ K AL M
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 264 KRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSC----NAVVCG 319
+ KLD+ +LI + K +ME + +F++LL+ + N+++ G
Sbjct: 643 DEMKNKGV----KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698
Query: 320 YAQNG 324
+ G
Sbjct: 699 FRNLG 703
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 120/299 (40%), Gaps = 57/299 (19%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFG---------------------- 116
+AT++I G K + A+ LF +M PN TF
Sbjct: 341 AATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKM 400
Query: 117 -------TVLHSSTVLRNVVIGRQLHACATKI-------GLASNVFVGSALLDLYVKLST 162
+V H T+++ + G Q H A K+ GLA NVFV + +L K
Sbjct: 401 EVLGLTPSVFHVHTIIQGWLKG-QKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGK 458
Query: 163 IEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNA 214
+EA + + PNVVSY ++ G+ ++ + A VF + E+ N +++
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSI 518
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK-- 272
++ GC + + A+ M + ++I K+ + A I+
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Query: 273 --CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYAQNGR 325
C+ + NS+I + K G M+ ++ + ++ + N+++ +++ G +N R
Sbjct: 579 RLCVSCMSY---NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 34/199 (17%)
Query: 131 GRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLK 190
GRQ+HA K+G + + + ++L+ Y + GD +
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFY----------SSVGDVDY--------------- 118
Query: 191 RGRFEDALQVFHEMPER-NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
A QVF E PE+ N+V W AM+ ++ ++ EA+ F M E
Sbjct: 119 ------ARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTV 172
Query: 250 VITAAAKIAALGMGKRFHACAIKCLGKL--DVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
++A A + A+ MG+ ++ +IK +L D+ + NSL++ Y K G E + +F++ ++
Sbjct: 173 ALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMR 232
Query: 308 RNIVSCNAVVCGYAQNGRG 326
+++ + +++ GYA NG+
Sbjct: 233 KDVTTYTSMIFGYALNGQA 251
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I + + +AI LF RM A KI + L + L V +G ++++ + K
Sbjct: 136 TAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIK 195
Query: 141 IG--LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
LA ++ + ++LL++YVK E+A+K F ++ +V +YT+++ GY G+ +++L
Sbjct: 196 RKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESL 255
Query: 199 QVFHEMP----------ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTF 247
++F +M N V++ ++ CS +G EE F M+ + P E+ F
Sbjct: 256 ELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF 315
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 29/234 (12%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHAC- 137
S +T+I GFAK ++A++LF M I + ++ T+L T +GR A
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK-----VGRSEEALD 465
Query: 138 ----ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYL 189
+G+ +V +ALL Y K +E +K F + + PN+++Y+ L+ GY
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Query: 190 KRGRFEDALQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
K G +++A+++F E +VV ++A++ + G AV+ +M +EG P
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVV 585
Query: 246 TFPSVITAAAKIAAL--------GMGKRFHACAIKCLGKLDVFVGNSLISFYAK 291
T+ S+I A + A + G F + A+ L + + GN +I + +
Sbjct: 586 TYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE---GNRVIQLFGQ 636
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 151/358 (42%), Gaps = 60/358 (16%)
Query: 24 SCRYITKT-VHTHYHSLATKHENTVVQ--KDIIPYGLDPTTFQVACHMFDEISDLTG-ES 79
S R+++K ++AT+H + ++ I + D F F+ S L G +
Sbjct: 141 STRFVSKMHFGRQKTTMATRHSSAAEDALQNAIDFSGDDEMFHSLMLSFE--SKLCGSDD 198
Query: 80 ATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLR--NVVIGRQLHAC 137
T II R+ + A+ + + + R NE ST+ R V I +++
Sbjct: 199 CTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFET 258
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALV--CG---- 187
A G + V+ SAL+ Y + EEA F + PN+V+Y A++ CG
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
Query: 188 -YLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF------ 240
+ + +F D +Q P+R +++N+++ CS+ G E A N F +M
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS 376
Query: 241 -----------------------IPTESTFPSVITAAAKIAALGMGKRFHAC-----AIK 272
+P + P+V++ + I RF ++
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 273 CLG-KLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYAQNGR 325
LG LD N+L+S Y K G E++L + ++ +K+++V+ NA++ GY + G+
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 133/330 (40%), Gaps = 91/330 (27%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS---------------STVL 125
+ +I + + HE+AI +F+ M +RPN T+ V+ + +
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 126 RNVV---------------------IGRQLHACATKIGLASNVFVGSALLDLYVKLSTIE 164
RN V R L T + +VF + LLD K ++
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 165 EAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMP--------------- 205
A + PNVVSY+ ++ G+ K GRF++AL +F EM
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 206 ------------------------ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
+++VV++NA++GG + G +E F +M RE +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 242 PTESTFPSVITAAAK----IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMED 297
P T+ ++I +K A+ + + F + ++ DV + ++LI K G +
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA----DVVLYSALIDALCKNGLVGS 567
Query: 298 SLLMFNKLLKR----NIVSCNAVVCGYAQN 323
++ + +++ K N+V+ N+++ + ++
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 12/225 (5%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A+ L RM+ +P +GT+++ + + L + + + ++V + +A++D
Sbjct: 29 ALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84
Query: 156 LYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDALQVFHEMPER---- 207
K AQ F + P+V++Y+ ++ + + GR+ DA Q+ +M ER
Sbjct: 85 RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFH 267
+VV+++A++ + G EA + DMLR G PT T+ S+I K L KR
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 268 ACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVS 312
DV ++LI+ Y K +++ + +F ++ +R IV+
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 249
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 19/250 (7%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH----SSTVLR-NVVIGRQLH 135
T ++ AK + ++ I LF +M I P T V+H SS R + +G+ +
Sbjct: 87 TRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM- 145
Query: 136 ACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF----GDTQHPNVVSYTALVCGYLKR 191
K+G ++ ++LL+ Y + IE+A F G PNVV+YT L+ K
Sbjct: 146 ----KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 192 GRFEDALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
A+++F++M NVV++NA+V G + G +A DM++ P TF
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
++I A K+ L K + I+ DVF SLI+ G ++++ MF L++
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF-YLME 320
Query: 308 RNIVSCNAVV 317
RN N V+
Sbjct: 321 RNGCYPNEVI 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 108/242 (44%), Gaps = 12/242 (4%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
DA L M+ +I PN TF ++ + + ++ ++L+ ++ + +VF +L+
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 155 DLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMPER--- 207
+ ++EA++ F + +PN V YT L+ G+ K R ED +++F+EM ++
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 208 -NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRF 266
N +++ ++ G G + A F M P T+ ++ +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 267 HACAIKCLGKLDVFVGNSLISFYAKCGSMEDSL----LMFNKLLKRNIVSCNAVVCGYAQ 322
K +++ +I K G +ED+ +F+K +K N+++ ++ G+ +
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 323 NG 324
G
Sbjct: 481 RG 482
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TT+I GF K ED + +F M + N T+ ++ ++ + +++ +
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP----NVVSYTALVCGYLKRGRFED 196
++ + LLD +E+A F + N+V+YT ++ G K G+ ED
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
A +F + + NV+++ M+ G + G EA + F M +GF+P ES +
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 103/233 (44%), Gaps = 8/233 (3%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T +I F K +A L++ M+ + P+ FT+G++++ + + RQ+ +
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP----NVVSYTALVCGYLKRGRFED 196
G N + + L+ + K +E+ K F + N ++YT L+ GY GR +
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A +VF++M R ++ ++N ++ G G E+A+ F M + T+ +I
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
K+ + K +V ++IS + + G + ++ +F K+
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 12/243 (4%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
++A HL M P+ ++ TV++ + +L + GL N ++ ++
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 322
Query: 154 LDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDALQVFHEMPER-- 207
+ L ++ + EA++AF + P+ V YT L+ G+ KRG A + F+EM R
Sbjct: 323 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 208 --NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
+V+++ A++ G Q G EA F +M +G P TF +I K + R
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYA 321
H I+ +V +LI K G ++ + + +++ L+ NI + N++V G
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 322 QNG 324
++G
Sbjct: 503 KSG 505
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 16/242 (6%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVV-IGRQLHACAT 139
TT+I GF KR A F M + I P+ T+ ++ + ++V G+ H
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFE 195
K GL + + L++ Y K +++A + PNVV+YT L+ G K G +
Sbjct: 415 K-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 196 DALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
A ++ HEM + N+ ++N++V G ++G+ EEAV + G T+ +++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 252 TAAAKIAALGMGKRFHACAIKCLGK---LDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR 308
A K + + + LGK + N L++ + G +ED + N +L +
Sbjct: 534 DAYCKSGEMDKAQEILK---EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 309 NI 310
I
Sbjct: 591 GI 592
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 12/243 (4%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
++A HL M P+ ++ TV++ + +L + GL N ++ ++
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 322
Query: 154 LDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDALQVFHEMPER-- 207
+ L ++ + EA++AF + P+ V YT L+ G+ KRG A + F+EM R
Sbjct: 323 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 208 --NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
+V+++ A++ G Q G EA F +M +G P TF +I K + R
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYA 321
H I+ +V +LI K G ++ + + +++ L+ NI + N++V G
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 322 QNG 324
++G
Sbjct: 503 KSG 505
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 16/242 (6%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVV-IGRQLHACAT 139
TT+I GF KR A F M + I P+ T+ ++ + ++V G+ H
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 140 KIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFE 195
K GL + + L++ Y K +++A + PNVV+YT L+ G K G +
Sbjct: 415 K-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 196 DALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
A ++ HEM + N+ ++N++V G ++G+ EEAV + G T+ +++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 252 TAAAKIAALGMGKRFHACAIKCLGK---LDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR 308
A K + + + LGK + N L++ + G +ED + N +L +
Sbjct: 534 DAYCKSGEMDKAQEILK---EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 309 NI 310
I
Sbjct: 591 GI 592
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 32/261 (12%)
Query: 65 ACHMFDEI-SDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSST 123
A +FDE+ + + +T++ G+ + A+ LF M S++ N T + L + +
Sbjct: 179 ARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAIS 238
Query: 124 VLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTA 183
L ++ H KIGL LDL++ TA
Sbjct: 239 DLGDLSGAESAHVLCIKIGLD---------LDLHL----------------------ITA 267
Query: 184 LVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
L+ Y K G A ++F ++VV+WN M+ ++TG EE V M E P
Sbjct: 268 LIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPN 327
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
STF ++++ A A +G+ + LD +G +L+ YAK G +E ++ +FN
Sbjct: 328 SSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFN 387
Query: 304 KLLKRNIVSCNAVVCGYAQNG 324
++ +++ S A++ GY +G
Sbjct: 388 RMKDKDVKSWTAMISGYGAHG 408
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 7/185 (3%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I +AK E+ + L +M K++PN TF +L S +GR + +
Sbjct: 299 MIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEER 358
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
+A + +G+AL+D+Y K+ +E+A + F + +V S+TA++ GY G +A+ +F+
Sbjct: 359 IALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFN 418
Query: 203 EMPERNV------VSWNAMVGGCSQTGHNEEAVNFFIDMLRE-GFIPTESTFPSVITAAA 255
+M E N +++ ++ CS G E + F M+ F P + V+
Sbjct: 419 KMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLG 478
Query: 256 KIAAL 260
+ L
Sbjct: 479 RAGQL 483
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 123/288 (42%), Gaps = 46/288 (15%)
Query: 52 IIPYGLDPTTFQV--------------ACHMFDEISDLTGESATTIICGFAKRHCHEDAI 97
++ GLD F V A +F+ +S+ T+I G++ E A
Sbjct: 51 MVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAF 110
Query: 98 HLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLY 157
+F+++ A + + F+F T L S + V IG LH A + G + +AL+ Y
Sbjct: 111 SVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFY 170
Query: 158 VKLSTIEEAQKAFGDT-QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMV 216
I +A+K F + Q + V+++ L+ GYL+ + AL +F M + VV
Sbjct: 171 CVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVV------ 224
Query: 217 GGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGK 276
VN ST S ++A + + L + H IK
Sbjct: 225 ------------VNV-------------STLLSFLSAISDLGDLSGAESAHVLCIKIGLD 259
Query: 277 LDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
LD+ + +LI Y K G + + +F+ +++++V+ N ++ YA+ G
Sbjct: 260 LDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTG 307
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 17/273 (6%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+T+I K +DA++LF+ M IRP+ FT+ +++ +L + +
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGD----TQHPNVVSYTALVCGYLKRGRFED 196
+ NV ++L+D + K + EA+K F + + PN+V+Y +L+ G+ R ++
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A Q+F M + +VV++N ++ G + + + F DM R G + T+ ++I
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR---- 308
+ + + + ++ N+L+ K G +E ++++F L K
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 309 -----NIVSCNAVVCGYAQNGRGGFTSWATLGL 336
NI+S G ++G F S + G+
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 51/256 (19%)
Query: 65 ACHMFDEIS----DLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
A +FDE+ D + ++I GF ++A +F+ M++ P+ T+ T+++
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF----GDTQHP 176
+ VV G +L ++ GL N + L+ + + S + AQ F D HP
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPER----------------------------- 207
N+++Y L+ G K G+ E A+ VF + +
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 208 ----------NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA---- 253
+V+++N M+ G + G EEA FI M +G +P T+ ++I A
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 254 AAKIAALGMGKRFHAC 269
K A+ + K +C
Sbjct: 569 GDKAASAELIKEMRSC 584
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 113/241 (46%), Gaps = 12/241 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TT++ G + + +A+ L RM+ +P+ T+G V++ + L K
Sbjct: 174 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
+ ++V + S ++D K +++A F + + P+V +Y++L+ GR+ D
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A ++ +M ER NVV++N+++ ++ G EA F +M++ P T+ S+I
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 253 AAAKIAALGMGKRFHACAI--KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
L ++ + CL DV N+LI+ + K + D + +F + +R +
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLP--DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 311 V 311
V
Sbjct: 412 V 412
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 26/262 (9%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I G KR + A++L ++M KI + + TV+ S R+V L G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDAL 198
+ +VF S+L+ +A + D +PNVV++ +L+ + K G+ +A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 199 QVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA- 253
++F EM +R N+V++N+++ G +EA F M+ + +P T+ ++I
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 254 -AAKIAALGMGKRFHACAIKCLGKLDVFVGN-----SLISFYAKCGSMEDSLLMFNKLLK 307
AK GM + F + + L VGN +LI + + +++ ++F +++
Sbjct: 391 CKAKKVVDGM-ELFRDMSRRGL------VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 308 R----NIVSCNAVVCGYAQNGR 325
NI++ N ++ G +NG+
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGK 465
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 17/266 (6%)
Query: 75 LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQL 134
L+ S ++ K + D +++ M+ KI+PN FTF V+++ + R +
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 135 HACATKIGLASNVFVGSALLDLYVKLSTIEEAQKA-------FGDTQHPNVVSYTALVCG 187
G + NV + L+D Y KL + KA + PN+ ++ L+ G
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305
Query: 188 YLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
+ K +++VF EM ++ NV+S+N+++ G G EA++ M+ G P
Sbjct: 306 FWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN 365
Query: 244 ESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVF-VGNSLISFYAKCGSMEDSLLMF 302
T+ ++I K L ++K G + + N LI Y K G ++D +
Sbjct: 366 LITYNALINGFCKNDMLKEALDMFG-SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 303 NKLLKRNIV----SCNAVVCGYAQNG 324
++ + IV + N ++ G +NG
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNG 450
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 22/260 (8%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I GF K ++ +F ML ++PN ++ ++++ + + G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDAL 198
+ N+ +AL++ + K ++EA FG + P Y L+ Y K G+ +D
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 199 QVFHEMPERNVV----SWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
+ EM +V ++N ++ G + G+ E A F D L +P TF ++
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTSKGLPDLVTFHILMEGY 480
Query: 255 AKIAALGMGKRFHACAIKCLGKLDV----FVGNSLISFYAKCGSMEDSLLMFNKL----- 305
+ R A +K + K+ + N ++ Y K G+++ + M ++
Sbjct: 481 CRKGE----SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Query: 306 LKRNIVSCNAVVCGYAQNGR 325
L+ N+ S N ++ GY+Q G+
Sbjct: 537 LRMNVASYNVLLQGYSQKGK 556
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 133 QLHACATKIGLASNVFVGSALLDL----YVKLSTIEEAQKAFGDTQH----PNVVSYTAL 184
Q+H+ I + NV V S + D+ Y S E +AF + + + +S L
Sbjct: 135 QVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL 194
Query: 185 VCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGF 240
+ LK R D V+ EM R NV ++N ++ +TG +A + DM G
Sbjct: 195 MIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254
Query: 241 IPTESTFPSVITAAAKIAALGMGKRFHACAI-KCLGKLDVFVG----NSLISFYAKCGSM 295
P ++ ++I K+ G GK + A A+ K + + DV N LI + K ++
Sbjct: 255 SPNVVSYNTLIDGYCKLG--GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 296 EDSLLMFNKLL----KRNIVSCNAVVCGYAQNGR 325
S+ +F ++L K N++S N+++ G G+
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 12/256 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T ++ G DA L S M+ KI PN T+ +L + V+ ++L +
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP----NVVSYTALVCGYLKRGRFED 196
+ + ++ S+L++ I+EA + F +VVSY L+ G+ K R ED
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
+++F EM +R N V++N ++ G Q G ++A FF M G P T+ ++
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKR 308
L K LD+ ++I K G +E++ +F L LK
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 309 NIVSCNAVVCGYAQNG 324
+IV+ ++ G G
Sbjct: 469 DIVTYTTMMSGLCTKG 484
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 127/292 (43%), Gaps = 49/292 (16%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS-------------------S 122
+++ GF +R+ DA+ L +M+ +P+ + ++ S
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 123 TVLRNVVI----------------GRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEA 166
+ NVV +L + K + NV SALLD +VK + EA
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 167 QKAFGD----TQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGG 218
++ F + + P++V+Y++L+ G R ++A Q+F M + +VVS+N ++ G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 219 CSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLG-KL 277
+ E+ + F +M + G + T+ ++I + + + F + + G
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS-QMDFFGISP 398
Query: 278 DVFVGNSLISFYAKCGSMEDSLLMFNKLLKR----NIVSCNAVVCGYAQNGR 325
D++ N L+ G +E +L++F + KR +IV+ V+ G + G+
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLR--NVVI--GRQLHACATKIGLASNVFVG 150
DAI LFS M+ S+ P+ F +L + L+ +VVI G+++ +G+ ++++
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV----LGIRNDLYTF 123
Query: 151 SALLDLYVKLSTIEEAQKAFGDT----QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPE 206
+ +++ + + A G P+ V+ +LV G+ +R R DA+ + +M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 207 ----RNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGM 262
++V++NA++ +T +A +FF ++ R+G P T+ +++ +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 263 GKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
R + IK +V ++L+ + K G + ++ +F ++++ +I
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T+I GF K ED + LF M + N T+ T++ +V ++ +
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP----NVVSYTALVCGYLKRGRF 194
G++ +++ + LL +E+A F D Q ++V+YT ++ G K G+
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 195 EDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS- 249
E+A +F + + ++V++ M+ G G E + M +EG + + T
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDG 511
Query: 250 VITAAAKI 257
IT +A++
Sbjct: 512 DITLSAEL 519
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 45/283 (15%)
Query: 53 IPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNE 112
+ L P +C +F + + T T+I F+ + LF +R N
Sbjct: 53 LALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFR-----SLRRNS 107
Query: 113 FTFGTVLHSSTVLR------NVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEA 166
L SS L+ +++ G Q+H G S+ + + L+DLY ST E +
Sbjct: 108 SLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLY---STCENS 164
Query: 167 QKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNE 226
DA +VF E+P+R+ VSWN + +
Sbjct: 165 T----------------------------DACKVFDEIPKRDTVSWNVLFSCYLRNKRTR 196
Query: 227 EAVNFFIDMLRE--GFI-PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGN 283
+ + F M + G + P T + A A + AL GK+ H + + + N
Sbjct: 197 DVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSN 256
Query: 284 SLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+L+S Y++CGSM+ + +F + +RN+VS A++ G A NG G
Sbjct: 257 TLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 34/205 (16%)
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRM---LASKIRPNEFTFGTVLHS 121
AC +FDEI S + + + D + LF +M + ++P+ T L +
Sbjct: 167 ACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA 226
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSY 181
L + G+Q+H + GL+ + + + L+ +Y +
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSR---------------------- 264
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
CG + + A QVF+ M ERNVVSW A++ G + G +EA+ F +ML+ G
Sbjct: 265 ----CGSMDK-----AYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGIS 315
Query: 242 PTESTFPSVITAAAKIAALGMGKRF 266
P E T +++A + + G F
Sbjct: 316 PEEQTLTGLLSACSHSGLVAEGMMF 340
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 134/313 (42%), Gaps = 32/313 (10%)
Query: 45 NTVVQKDIIPYGLDPTTFQVACHMFDEISD--LTGE--SATTIICGFAKRHCHEDAIHLF 100
+T ++ Y + + ++A +F+E+ L + + T ++ F K E A F
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 101 SRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKL 160
+ M PN T+ ++H+ + V +L G N+ SAL+D + K
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 161 STIEEAQKAF--------------------GDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
+E+A + F +++ PNVV+Y AL+ G+ K R E+A ++
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 201 FHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
M E N + ++A++ G + G +EA +M GF T T+ S+I K
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSL----LMFNKLLKRNIVS 312
+ + + + ++ +V + +I K G +++ +M K + N+V+
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 313 CNAVVCGYAQNGR 325
A++ G+ G+
Sbjct: 782 YTAMIDGFGMIGK 794
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
++ GF K H E+A L M PN+ + ++ + + +++ ++ G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFG----DTQHPNVVSYTALVCGYLKRGRFEDAL 198
+ ++ S+L+D Y K+ + A K ++ PNVV YT ++ G K G+ ++A
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 199 QVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
++ M E+ NVV++ AM+ G G E + M +G P T+ +I
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 255 AKIAALGMG 263
K AL +
Sbjct: 825 CKNGALDVA 833
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 18/244 (7%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TI+ G KR +A LF+ M + P+ +T ++ L N+ +L +
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
+ +V + LLD + K+ I+ A++ + D P +SY+ LV +G +
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 197 ALQVFHEMPERN----VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A +V+ EM +N V+ N+M+ G ++G+ + +F M+ EGF+P ++ ++I
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 253 AAAK----IAALGMGKRFHACAIKCLGKL--DVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
+ A G+ K+ G L DVF NS++ + + M+++ ++ K++
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQ----GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 307 KRNI 310
+R +
Sbjct: 685 ERGV 688
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRF 194
++ G+ NV+ + +++ K +E+ Q +P++V+Y L+ Y +G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 195 EDALQVFHEMPERN----VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSV 250
E+A ++ + MP + V ++N ++ G + G E A F +MLR G P +T+ S+
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 251 ITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
+ A K + ++ + D+ +S++S + + G+++ +L+ FN + + +
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 311 VSCNAV----VCGYAQNG 324
+ N + + GY + G
Sbjct: 407 IPDNVIYTILIQGYCRKG 424
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I G K +E A +F+ ML S + P+ T+ ++L + +VV ++ +
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
+ ++ S+++ L+ + +++A F + P+ V YT L+ GY ++G
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A+ + +EM ++ +VV++N ++ G + EA F +M P T +I
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 253 AAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIV 311
K+ L + +LDV N+L+ + K G ++ + ++ ++ + I+
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 119/257 (46%), Gaps = 14/257 (5%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T+I ++ + E+A L + M P +T+ TV++ +++ A +
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
GL+ + +LL K + E +K F D + P++V +++++ + + G +
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 197 ALQVFHEMPERNVVSWNA----MVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
AL F+ + E ++ N ++ G + G A+N +ML++G T+ +++
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 253 AAAKIAALGMG-KRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LK 307
K LG K F+ + L D + LI + K G++++++ +F K+ ++
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFP-DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 308 RNIVSCNAVVCGYAQNG 324
++V+ N ++ G+ + G
Sbjct: 513 LDVVTYNTLLDGFGKVG 529
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 124/265 (46%), Gaps = 20/265 (7%)
Query: 76 TGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLH 135
+ +S T ++ K I++F +L S RP++F +G + ++ L +V G +L
Sbjct: 143 SSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELF 202
Query: 136 ACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKR 191
+ +VF+ + L+D K + +A++ F + P++++Y L+ GY K
Sbjct: 203 NRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKA 262
Query: 192 GRFEDALQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
G E + +V M E +++++N ++ G + G E+A N +M GF+P TF
Sbjct: 263 GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF 322
Query: 248 PSVITAAAK----IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFN 303
+ + AALG+ + A+ K++ + + L++ K G +E + +
Sbjct: 323 SILFDGYSSNEKAEAALGV----YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 304 KLLKRNIVS----CNAVVCGYAQNG 324
+ + + +V N ++ GY + G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKG 403
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 120/264 (45%), Gaps = 24/264 (9%)
Query: 78 ESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH----SSTVLRNVVIGRQ 133
E+ +I G+ +++ + + M + PN ++GT+++ S +L ++ R
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 134 LHACATKIGLASNVFVGSALLDLYVKLSTIEEA----QKAFGDTQHPNVVSYTALVCGYL 189
+ G++ V + + L+D IE+A ++ N+V+Y L+ G
Sbjct: 520 ME----DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 190 KRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
G+ +A + E+ + +V ++N+++ G G+ + + + +M R G PT
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK 635
Query: 246 TFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
T+ +I+ K + F ++K D+ V N ++ YA G ME + + ++
Sbjct: 636 TYHLLISLCTKEGIELTERLFGEMSLKP----DLLVYNGVLHCYAVHGDMEKAFNLQKQM 691
Query: 306 LKRNI----VSCNAVVCGYAQNGR 325
++++I + N+++ G + G+
Sbjct: 692 IEKSIGLDKTTYNSLILGQLKVGK 715
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 22/241 (9%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL--HSSTVLRNVVIGRQLHACA 138
T++ G K EDA ++ M P+ FTF + +SS +G ++ A
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG--VYETA 345
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRF 194
G+ N + S LL+ K IE+A++ G PN V Y ++ GY ++G
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 195 EDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSV 250
A M ++ + +++N ++ + G E A M +G P+ T+ +
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 251 ITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
I G G+++ KC L N + G++ + L +KLL+ I
Sbjct: 466 IG--------GYGRKYE--FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 311 V 311
V
Sbjct: 516 V 516
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 116/241 (48%), Gaps = 12/241 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
TT+I G + +A+ L RM+ +P+ T+G V++ + + L
Sbjct: 187 TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
+ +NV + S ++D K ++A F + ++ PNV++Y++L+ GR+ D
Sbjct: 247 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSD 306
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVIT 252
A ++ +M ER N+V+++A++ + G +A + +M++ P T+ S+I
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Query: 253 AAAKIAALGMGKRFHACAIK--CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
+ LG K+ I+ CL +V N+LI+ + K ++ + +F ++ +R +
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLP--NVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424
Query: 311 V 311
V
Sbjct: 425 V 425
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 18/244 (7%)
Query: 65 ACHMFDEISD-------LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
A ++F E+ + +T S + +C + + DA L S M+ KI PN TF
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGR---WSDASRLLSDMIERKINPNLVTFSA 328
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH-- 175
++ + +V +L+ K + N+F S+L++ + L + EA++
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 176 --PNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAV 229
PNVV+Y L+ G+ K R + +++F EM +R N V++ ++ G Q + A
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 230 NFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFY 289
F M+ G P T+ ++ K L + + D++ N +I
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Query: 290 AKCG 293
K G
Sbjct: 509 CKAG 512
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 8/179 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+T+I K +DA++LF+ M +RPN T+ +++ +L + +
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGD----TQHPNVVSYTALVCGYLKRGRFED 196
+ N+ SAL+D +VK + +A+K + + + PN+ +Y++L+ G+ R +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
A Q+ M + NVV++N ++ G + ++ + F +M + G + T+ ++I
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 114/255 (44%), Gaps = 39/255 (15%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+++ GF + DA+ L +M+ +P+ TF T++H G LH A++
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH----------GLFLHNKASE 201
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQV 200
AL+D V+ P++V+Y A+V G KRG + AL +
Sbjct: 202 ---------AVALIDRMVQRGC------------QPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 201 FHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
++M E NVV ++ ++ + H ++A+N F +M +G P T+ S+I+
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR----NIVS 312
R + I+ ++ ++LI + K G + + ++ +++KR NI +
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360
Query: 313 CNAVVCGYAQNGRGG 327
++++ G+ R G
Sbjct: 361 YSSLINGFCMLDRLG 375
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 38/230 (16%)
Query: 30 KTVHTH-YHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFA 88
+ +H H L + + VQ ++ + + + A +F+ I + + T++ +A
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA 192
Query: 89 KRH---CHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLAS 145
E+ + LF RM ++RPNE + ++ S L V G H K L
Sbjct: 193 NSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTL 249
Query: 146 NVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMP 205
N FVG++L+DLY K CG L R +VF EM
Sbjct: 250 NQFVGTSLIDLYSK--------------------------CGCLSFAR-----KVFDEMS 278
Query: 206 ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAA 255
+R+V +NAM+ G + G +E + + ++ +G +P +TF I+A +
Sbjct: 279 QRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACS 328
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 96 AIHLFSRMLASK---IRPNEFTFGTVLHSSTVLRNV-VIGRQLHACATKI--GLASNVFV 149
A L+ ++L+S+ +RPNEFT+ ++ +S GR LHA K + + FV
Sbjct: 93 AFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFV 152
Query: 150 GSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV 209
+AL+ Y + EA+ F + P++ ++ L+ Y
Sbjct: 153 QAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY--------------------- 191
Query: 210 VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHAC 269
+ +EE + F+ M P E + ++I + A + G H
Sbjct: 192 -------ANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVY 241
Query: 270 AIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNGRG 326
+K L+ FVG SLI Y+KCG + + +F+++ +R++ NA++ G A +G G
Sbjct: 242 VLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFG 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEE----AVNFFIDML--REGFI-PTESTFPS 249
AL + ++P +V +N ++ + HN A + + +L R F+ P E T+PS
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIV-SNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPS 117
Query: 250 VITAAAKIAALGM-GKRFHACAIKCLGKL--DVFVGNSLISFYAKCGSMEDSLLMFNKLL 306
+ A+ A G+ HA +K L + D FV +L+ FYA CG + ++ +F ++
Sbjct: 118 LFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIR 177
Query: 307 KRNIVSCNAVVCGYAQN 323
+ ++ + N ++ YA +
Sbjct: 178 EPDLATWNTLLAAYANS 194
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 129/300 (43%), Gaps = 47/300 (15%)
Query: 28 ITKTVHTHYH-SLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICG 86
+ K H +Y SL + EN ++ D++ Y T+++ G
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMY-------------------------TSLVNG 221
Query: 87 FAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN 146
DA L M KI+P+ TF ++ + + +L+ ++ +A N
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 147 VFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFH 202
+F ++L++ + ++EA++ F + P+VV+YT+L+ G+ K + +DA+++F+
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 203 EMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI-----TA 253
EM ++ N +++ ++ G Q G A F M+ G P T+ ++
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 254 AAKIAAL---GMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
K A + M KR +++ N L+ G +E +L++F + KR +
Sbjct: 402 KVKKALMIFEDMQKREMDGVAP-----NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 112/244 (45%), Gaps = 16/244 (6%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A +M+ P+ TF ++++ + + + ++G+ +V + + ++D
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 156 LYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDALQVFHEMPER---- 207
K + A F ++ P+VV YT+LV G GR+ DA + M +R
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR-F 266
+V+++NA++ + G +A + +M+R P T+ S+I + ++ F
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 267 HACAIK-CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR----NIVSCNAVVCGYA 321
+ K C DV SLI+ + KC ++D++ +F ++ ++ N ++ ++ G+
Sbjct: 306 YLMETKGCFP--DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 322 QNGR 325
Q G+
Sbjct: 364 QVGK 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
T++I GF K +DA+ +F M + N T+ T++ + + +++ +
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 141 IGLASNVFVGSALL-------DLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGR 193
G+ N+ + LL + L E+ QK D PN+ +Y L+ G G+
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 194 FEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
E AL VF +M +R + +++ ++ G + G + AVN F +P++ P+
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCS------LPSKGVKPN 494
Query: 250 VITAAAKIAAL 260
V+T I+ L
Sbjct: 495 VVTYTTMISGL 505
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 123/274 (44%), Gaps = 21/274 (7%)
Query: 63 QVACHMFDEISD-------LTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTF 115
+VA +F E+ +T S +C + + DA L S ML KI PN TF
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR---WSDASRLLSNMLEKKINPNVVTF 331
Query: 116 GTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAF----G 171
++ + +V +LH + + + + L++ + + ++EA++ F
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 172 DTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEE 227
PN+ +Y L+ G+ K R ED +++F EM +R N V++ ++ G Q G +
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 228 AVNFFIDMLREGFIPTE-STFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLI 286
A F M+ +PT+ T+ ++ L K +L++F+ N++I
Sbjct: 452 AQMVFKQMVSNR-VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 287 SFYAKCGSMEDSLLMFNKL-LKRNIVSCNAVVCG 319
K G + ++ +F L +K ++V+ N ++ G
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 47/255 (18%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
T++ G KR + A++L ++M A++I+ N F T++ S R+V + L
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDA 197
G+ NV ++L++ +A + + +PNVV++ AL+ + K G+ +A
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 198 LQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA 253
++ EM +R++ +++N ++ G +EA F M+ + +P T+
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY------ 401
Query: 254 AAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR----N 309
N+LI+ + KC +ED + +F ++ +R N
Sbjct: 402 -----------------------------NTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 310 IVSCNAVVCGYAQNG 324
V+ ++ G+ Q G
Sbjct: 433 TVTYTTIIQGFFQAG 447
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Query: 78 ESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH----------SSTVLRN 127
++ T+I GF K ED + LF M + N T+ T++ + V +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 128 VVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP----NVVSYTA 183
+V R + +++ S LL ++ A F Q N+ Y
Sbjct: 459 MVSNR----------VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 184 LVCGYLKRGRFEDALQVFHEMP-ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
++ G K G+ +A +F + + +VV++N M+ G +EA + F M +G +P
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 243 TESTFPSVITA 253
T+ ++I A
Sbjct: 569 NSGTYNTLIRA 579
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 12/258 (4%)
Query: 65 ACHMFDEISD--LTGESAT--TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
AC MF+E+ T + T ++I G K +DA ++ +ML S R N + +++
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----P 176
+ G +++ + ++ + + +D K E+ + F + + P
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPERNVV----SWNAMVGGCSQTGHNEEAVNFF 232
+ SY+ L+ G +K G + ++F+ M E+ V ++N ++ G + G +A
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKC 292
+M +GF PT T+ SVI AKI L A +L+V + +SLI + K
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 293 GSMEDSLLMFNKLLKRNI 310
G ++++ L+ +L+++ +
Sbjct: 671 GRIDEAYLILEELMQKGL 688
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 113/271 (41%), Gaps = 16/271 (5%)
Query: 52 IIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPN 111
+I G T+++ M ++ L + +I GF K A L M P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 112 EFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFG 171
T+G+V+ + + L A + NV + S+L+D + K+ I+EA
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 172 DTQH----PNVVSYTALVCGYLKRGRFEDALQVFHEMPE----RNVVSWNAMVGGCSQTG 223
+ PN+ ++ +L+ +K +AL F M E N V++ ++ G +
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 224 HNEEAVNFFIDMLREGFIPTESTFPSVITAAAK---IAALG-MGKRFHACAIKCLGKLDV 279
+A F+ +M ++G P+ ++ ++I+ AK IA G + RF A G D
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG----GVPDS 797
Query: 280 FVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
N++I + D+ +F + +R +
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 120/292 (41%), Gaps = 23/292 (7%)
Query: 38 SLATKHENTVVQKDIIPYGLDPTTF------QVACHMFDEI-------SDLTGESATTII 84
SL + +++ + DI+ Y + +F +A F EI ++T S ++
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 85 CGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLA 144
C K + ++A+ +F + ++ P + + T++ L G
Sbjct: 284 C---KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 145 SNVFVGSALLDLYVKLSTIEEAQKAFGDTQH---PNVVSYTALVCGYLKRGRFEDALQVF 201
+V + +L K+ ++EA K F + + PN+ +Y L+ + G+ + A ++
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 202 HEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKI 257
M + NV + N MV ++ +EA F +M + P E TF S+I K+
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460
Query: 258 AALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRN 309
+ + + + + + V SLI + G ED ++ ++ +N
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 8/179 (4%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A ++F ML S++ PN FT+ ++ N+ + L G NV + L+D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 156 LYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMPER---- 207
Y KL I++ K PN++SY ++ G + GR ++ V EM R
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRF 266
+ V++N ++ G + G+ +A+ +MLR G P+ T+ S+I + K + F
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 120/256 (46%), Gaps = 12/256 (4%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
T+I G+ K A+ + + ML + P+ T+ +++HS N+ +
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDA 197
GL N + L+D + + + EA + + P+VV+Y AL+ G+ G+ EDA
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 198 LQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA 253
+ V +M E+ +VVS++ ++ G ++ +EA+ +M+ +G P T+ S+I
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 254 AAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR----N 309
+ + ++ D F +LI+ Y G +E +L + N+++++ +
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 310 IVSCNAVVCGYAQNGR 325
+V+ + ++ G + R
Sbjct: 555 VVTYSVLINGLNKQSR 570
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 108/247 (43%), Gaps = 26/247 (10%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A+ LF +M PN T+ T++ LR + G +L GL N+ + +++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 156 LYVKLSTIEEAQKAFGDTQHP----NVVSYTALVCGYLKRGRFEDALQVFHEMPER---- 207
+ ++E + + V+Y L+ GY K G F AL + EM
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFH 267
+V+++ +++ + G+ A+ F M G P E T+ +++ ++ K +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ-------KGYM 396
Query: 268 ACAIKCLGKLD-------VFVGNSLISFYAKCGSMEDSLL----MFNKLLKRNIVSCNAV 316
A + L +++ V N+LI+ + G MED++ M K L ++VS + V
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 317 VCGYAQN 323
+ G+ ++
Sbjct: 457 LSGFCRS 463
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S +T++ GF + + ++A+ + M+ I+P+ T+ +++ R L+
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDAL 198
++GL + F +YTAL+ Y G E AL
Sbjct: 512 LRVGLPPDEF-------------------------------TYTALINAYCMEGDLEKAL 540
Query: 199 QVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
Q+ +EM E+ +VV+++ ++ G ++ EA + + E +P++ T+ ++I
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 255 AKI 257
+ I
Sbjct: 601 SNI 603
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+ II K H DA +LFS ML I PN FT+ ++ ++L +
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
+ +V +AL+ VK + EA+K + H P+ V+Y +++ G+ K RF+D
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A +F M +VV++N ++ + +E + ++ R G + +T+ ++I +
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
+ L + I D N L+ + + +E++L +F
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 16/265 (6%)
Query: 60 TTFQVACHMFDEISD--LTGESAT--TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTF 115
T F A +FD++ + LT T T+I G +A L ++M+ + + T+
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 116 GTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH 175
GT+++ + + L + + + +V + SA++D K +AQ F +
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 176 ----PNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEE 227
PNV +Y ++ G+ GR+ DA ++ +M ER +V+++NA++ + G E
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 228 AVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLIS 287
A +ML P T+ S+I K K + DV N++I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM----FDLMASPDVVTFNTIID 440
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVS 312
Y + +++ + + ++ +R +V+
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVA 465
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 37/267 (13%)
Query: 92 CHEDAIHL--FSRMLASKIRPNEFTFGTVLH-------------------SSTVLRNVVI 130
CH+ + L F ++ +P+ TF T+LH + L V +
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVAL 213
Query: 131 GRQLHACATKIGLASNVFVGSALLD-LYVKLSTIEEA---QKAFGDTQHPNVVSYTALVC 186
Q+ +IGL V + L++ L ++ +E A K G H +VV+Y +V
Sbjct: 214 FDQM----VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 187 GYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
G K G + AL + +M E +VV ++A++ + GH+ +A F +ML +G P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
T+ +I +R I+ DV N+LIS K G + ++ +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 303 NKLLKRNI----VSCNAVVCGYAQNGR 325
+++L R I V+ N+++ G+ ++ R
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F A HMFD ++ + TII + + ++ + L + + N T+ T++H
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNV--- 178
+ N+ + L G+ + + LL + + +EEA + F Q +
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 179 -VSYTALVCGYLKRGRFEDALQVFHEMP----ERNVVSWNAMVGG-CSQTGHNEEAVNFF 232
V+Y ++ G K + ++A +F +P E +V ++N M+ G C ++ ++ V F
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV-LF 595
Query: 233 IDMLREGFIPTESTFPSVITAAAKIAAL 260
M G P ST+ ++I K +
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 13/258 (5%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I G+ K + H+ A+ + ++ML K+ P+ T+ +++ N +L + G
Sbjct: 434 LIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDAL 198
L + + ++++D K +EEA F + PNVV YTAL+ GY K G+ ++A
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 199 QVFHEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAA 254
+ +M +N +++NA++ G G +EA M++ G PT ST +I
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 255 AKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNI 310
K + K D + I Y + G + D+ M K+ + ++
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 311 VSCNAVVCGYAQNGRGGF 328
+ ++++ GY G+ F
Sbjct: 673 FTYSSLIKGYGDLGQTNF 690
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 140/372 (37%), Gaps = 99/372 (26%)
Query: 36 YHSLATKHENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHED 95
Y L E I+ GLDP F + T++I G+ +R +
Sbjct: 228 YCKLGNVEEANQYVSKIVEAGLDPDFF----------------TYTSLIMGYCQRKDLDS 271
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLH----------------------------SSTVLRN 127
A +F+ M R NE + ++H + TVL
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 128 VVIGRQLHACATKI-------GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----P 176
+ G + + A + G+ N+ + L+D E+A++ G P
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMPER----------------------------- 207
NV++Y AL+ GY KRG EDA+ V M R
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN 451
Query: 208 ---------NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
+VV++N+++ G ++G+ + A M G +P + T+ S+I + K
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 259 ALGMG-KRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI----VSC 313
+ F + K + +V + +LI Y K G ++++ LM K+L +N ++
Sbjct: 512 RVEEACDLFDSLEQKGVNP-NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 314 NAVVCGYAQNGR 325
NA++ G +G+
Sbjct: 571 NALIHGLCADGK 582
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 12/222 (5%)
Query: 115 FGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ 174
+ T+L+S V +Q++ + + N++ + +++ Y KL +EEA +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 175 H----PNVVSYTALVCGYLKRGRFEDALQVFHEMP----ERNVVSWNAMVGGCSQTGHNE 226
P+ +YT+L+ GY +R + A +VF+EMP RN V++ ++ G +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 227 EAVNFFIDMLREGFIPTESTFPSVIT----AAAKIAALGMGKRFHACAIKCLGKLDVFVG 282
EA++ F+ M + PT T+ +I + K AL + K IK +
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 283 NSLISFYAKCGSMEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+SL S + E M K L N+++ NA++ GY + G
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 15/233 (6%)
Query: 63 QVACHMFDEISDLTGESA-----TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGT 117
+ AC +FD + G + T +I G+ K ++A + +ML+ PN TF
Sbjct: 514 EEACDLFDSLEQ-KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 118 VLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEA----QKAFGDT 173
++H + L KIGL V + L+ +K + A Q+
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 174 QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV----VSWNAMVGGCSQTGHNEEAV 229
P+ +YT + Y + GR DA + +M E V ++++++ G G A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 230 NFFIDMLREGFIPTESTFPSVITAAAKIA-ALGMGKRFHACAIKCLGKLDVFV 281
+ M G P++ TF S+I ++ G CA+ + + D V
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+ II K H DA +LFS ML I PN FT+ ++ ++L +
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFED 196
+ +V +AL+ VK + EA+K + H P+ V+Y +++ G+ K RF+D
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 197 ALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
A +F M +VV++N ++ + +E + ++ R G + +T+ ++I +
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 257 IAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
+ L + I D N L+ + + +E++L +F
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 16/265 (6%)
Query: 60 TTFQVACHMFDEISD--LTGESAT--TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTF 115
T F A +FD++ + LT T T+I G +A L ++M+ + + T+
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 116 GTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH 175
GT+++ + + L + + + +V + SA++D K +AQ F +
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 176 ----PNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEE 227
PNV +Y ++ G+ GR+ DA ++ +M ER +V+++NA++ + G E
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 228 AVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLIS 287
A +ML P T+ S+I K K + DV N++I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM----FDLMASPDVVTFNTIID 440
Query: 288 FYAKCGSMEDSLLMFNKLLKRNIVS 312
Y + +++ + + ++ +R +V+
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVA 465
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 37/267 (13%)
Query: 92 CHEDAIHL--FSRMLASKIRPNEFTFGTVLH-------------------SSTVLRNVVI 130
CH+ + L F ++ +P+ TF T+LH + L V +
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVAL 213
Query: 131 GRQLHACATKIGLASNVFVGSALLD-LYVKLSTIEEA---QKAFGDTQHPNVVSYTALVC 186
Q+ +IGL V + L++ L ++ +E A K G H +VV+Y +V
Sbjct: 214 FDQM----VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 187 GYLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIP 242
G K G + AL + +M E +VV ++A++ + GH+ +A F +ML +G P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 243 TESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMF 302
T+ +I +R I+ DV N+LIS K G + ++ +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 303 NKLLKRNI----VSCNAVVCGYAQNGR 325
+++L R I V+ N+++ G+ ++ R
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 10/204 (4%)
Query: 62 FQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS 121
F A HMFD ++ + TII + + ++ + L + + N T+ T++H
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 122 STVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNV--- 178
+ N+ + L G+ + + LL + + +EEA + F Q +
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 179 -VSYTALVCGYLKRGRFEDALQVFHEMP----ERNVVSWNAMVGG-CSQTGHNEEAVNFF 232
V+Y ++ G K + ++A +F +P E +V ++N M+ G C ++ ++ V F
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV-LF 595
Query: 233 IDMLREGFIPTESTFPSVITAAAK 256
M G P ST+ ++I K
Sbjct: 596 HKMKDNGHEPDNSTYNTLIRGCLK 619
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 TALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFI 241
T L+ Y K G A ++F EMP R+V SWNA++ G EA+ + M EG
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 242 PTESTFPSVITAAAKIAALGMGKR-FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLL 300
+E T + + A + + + G+ FH +V V N+ I Y+KCG ++ +
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHG-----YSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 301 MFNKLL-KRNIVSCNAVVCGYAQNGRG 326
+F + K+++V+ N ++ G+A +G
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEA 289
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 115/271 (42%), Gaps = 47/271 (17%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFT-------FGTVLHSSTVLR-------- 126
T+ICG + H +DA+ LF M + ++P +T +G S + L
Sbjct: 403 TLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 127 ----NVVI----------------GRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEA 166
N+V +Q+ IGL + + ++ Y K+ I+EA
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 167 QKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERN----VVSWNAMVGG 218
K + P+V+ +L+ K R ++A ++F M E VV++N ++ G
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 219 CSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK--IAALGMGKRFHACAIKCLGK 276
+ G +EA+ F M+++G P TF ++ K L + F + C+
Sbjct: 583 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVP- 641
Query: 277 LDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
DVF N++I K G +++++ F+++ K
Sbjct: 642 -DVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 50/289 (17%)
Query: 84 ICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGL 143
+C K C A +F +M + +P+ T+ T+L + R++ +Q + K G
Sbjct: 303 LCTARKLDC---AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 144 ASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDALQ 199
+V + L+D K EA + PN+ +Y L+CG L+ R +DAL+
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 200 VFHEMPE---------------------------------------RNVVSWNAMVGGCS 220
+F M N+V+ NA + +
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 221 QTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVF 280
+ G + EA F + G +P T+ ++ +K+ + + + ++ + DV
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 281 VGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYAQNGR 325
V NSLI+ K ++++ MF ++ LK +V+ N ++ G +NG+
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I GF K + A LF RM+ +RP+ T+ ++ ++ V G + G
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH-----PNVVSYTALVCGYLKRGRFEDA 197
L +V + +++ K +EEA F + + P++ +Y +L+ G E+A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 198 LQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITA 253
++++E+ E NV ++NA++ G S +G E A + M+ GF P T+ +
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1111
Query: 254 A 254
A
Sbjct: 1112 A 1112
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 107/261 (40%), Gaps = 14/261 (5%)
Query: 78 ESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHAC 137
++ ++++ G KR + + L M ++PN +TF + + ++
Sbjct: 224 QTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 283
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGR 193
G +V + L+D ++ A++ F + P+ V+Y L+ +
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 194 FEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
+ Q + EM + +VV++ +V + G+ EA + M +G +P T+ +
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 250 VITAAAKIAALGMGKRFHACAIKCLG-KLDVFVGNSLISFYAKCGSMEDSLLMFNKL--- 305
+I ++ L ++ LG K + I +Y K G +L F K+
Sbjct: 404 LICGLLRVHRLDDALELFG-NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 306 -LKRNIVSCNAVVCGYAQNGR 325
+ NIV+CNA + A+ GR
Sbjct: 463 GIAPNIVACNASLYSLAKAGR 483
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Query: 158 VKLSTIEEAQKAFGDTQH-----PNVVSYTALVCGYLKRGRFEDALQVFHEMPE----RN 208
VK +++A + D P +Y L+ G K GR +A Q+F M + N
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 209 VVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHA 268
+N ++ G + G + A F M++EG P T+ ++ + + G +
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 269 CAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL 305
+ DV N +I+ K +E++L++FN++
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
S T ++ GF K ++A ++ + M A ++PN F ++ + + ++
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHP----NVVSYTALVCGYLKRGRF 194
+ G +V+ ++L+ ++ I+ A D N V+Y L+ +L+RG
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 195 EDALQVFHEM----PERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSV 250
++A ++ +EM + +++N+++ G + G ++A + F MLR+G P+ + +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 251 ITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
I + + F + D+ NSLI+ + G +ED L MF KL I
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 17/262 (6%)
Query: 77 GESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHA 136
E+ +I G K +A + +RML P++ T+G +++ + V + L
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Query: 137 CATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGD--TQH---PNVVSYTALVCGYLKR 191
K + + + L+ +V +++A+ D T + P+V +Y +L+ GY K
Sbjct: 347 RIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 192 GRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTF 247
G AL+V H+M + NV S+ +V G + G +EA N +M +G P F
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 248 PSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLK 307
+I+A K + + K DV+ NSLIS + ++ +L + ++
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 308 R----NIVSCNAVVCGYAQNGR 325
N V+ N ++ + + G
Sbjct: 523 EGVVANTVTYNTLINAFLRRGE 544
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 113/285 (39%), Gaps = 56/285 (19%)
Query: 91 HCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVG 150
+CH+ A ++F ML+ KI P FTFG V+ + + + L TK G N +
Sbjct: 196 NCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY 255
Query: 151 SALLDLYVKLSTIEEA---------------QKAFGDTQ--------------------- 174
L+ K + + EA + F D
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 175 ---HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNF 231
P+ ++Y L+ G K GR + A +F+ +P+ +V +N ++ G G ++A
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 232 FIDMLRE-GFIPTESTFPSVITAAAKIAALGMG------KRFHACAIKCLGKLDVFVGNS 284
DM+ G +P T+ S+I K +G+ R C K +V+
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC------KPNVYSYTI 429
Query: 285 LISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYAQNGR 325
L+ + K G ++++ + N++ LK N V N ++ + + R
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 16/245 (6%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
DA+ L RM+ + +PNE T+G VL + +L + + + S ++
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 155 DLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMPER--- 207
D K +++ A F + + +++ YT L+ G+ GR++D ++ +M +R
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 208 -NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRF 266
+VV+++A++ + G EA +M++ G P T+ S+I K L
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 267 HACAIK--CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI----VSCNAVVCGY 320
+ C + F N LI+ Y K ++D L +F K+ R + V+ N ++ G+
Sbjct: 375 LDLMVSKGCGPNIRTF--NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 321 AQNGR 325
+ G+
Sbjct: 433 CELGK 437
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 21/297 (7%)
Query: 47 VVQKDIIPYGLDPTTFQVACH--MFDEISDLTGESA--TTIICGFAKRHCHEDAIHLFSR 102
++Q ++ G T ++C+ +F +SD G+ + + G +DA+ LF
Sbjct: 4 LIQTRLLETGTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIK-EDDAVDLFQE 62
Query: 103 MLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK--IGLASNVFVGSALLDLYVKL 160
M S+ RP F + S V R L C G+A N++ S +++ +
Sbjct: 63 MTRSRPRPRLIDFSRLF--SVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRC 120
Query: 161 STIEEAQKAFGDT----QHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NVVSW 212
+ A A G P+ V+++ L+ G GR +AL++ M E +++
Sbjct: 121 RKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITL 180
Query: 213 NAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIK 272
NA+V G G +AV M+ GF P E T+ V+ K + +
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 273 CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYAQNGR 325
KLD + +I K GS++++ +FN++ K +I+ ++ G+ GR
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 127/310 (40%), Gaps = 24/310 (7%)
Query: 38 SLATKHENTVVQKDIIPYGL------DPTTFQVACHMFDEISDLTGESA-----TTIICG 86
L K E ++ D + Y + + A ++F+E+ ++ G A TT+I G
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRG 291
Query: 87 FAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASN 146
F +D L M+ KI P+ F ++ + +LH + G++ +
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 147 VFVGSALLDLYVKLSTIEEAQKAF----GDTQHPNVVSYTALVCGYLKRGRFEDALQVFH 202
++L+D + K + +++A PN+ ++ L+ GY K +D L++F
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 203 EMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIA 258
+M R V V++N ++ G + G E A F +M+ P ++ ++
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 259 ALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCN 314
K +LD+ + N +I ++D+ +F L +K ++ + N
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 315 AVVCGYAQNG 324
++ G + G
Sbjct: 532 IMIGGLCKKG 541
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 43 HENTVVQKDIIPYGLDPTTFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSR 102
E + K++I G+ P T + T++I GF K + + A H+
Sbjct: 334 REAEELHKEMIQRGISPDTV----------------TYTSLIDGFCKENQLDKANHMLDL 377
Query: 103 MLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLST 162
M++ PN TF +++ + G +L + G+ ++ + L+ + +L
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 163 IEEAQKAFGDT----QHPNVVSYTALVCGYLKRGRFEDALQVFHEMP----ERNVVSWNA 214
+E A++ F + P++VSY L+ G G E AL++F ++ E ++ +N
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 215 MVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAAL 260
++ G ++A + F + +G P T+ +I K +L
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 128/297 (43%), Gaps = 60/297 (20%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHS---STVLRNV--VIGRQLHAC 137
+I G+ K +A+ + RM S P+ T+ T+L S S L+ V+ R L
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR- 233
Query: 138 ATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGR 193
+V + L++ + S + A K + + P+VV+Y LV G K GR
Sbjct: 234 ----DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 194 FEDALQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPS 249
++A++ ++MP + NV++ N ++ TG +A DMLR+GF P+ TF
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 250 VITAAAKIAALGMGKRF------HAC----------------------AIKCLGKL---- 277
+I + LG H C AI+ L ++
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 278 ---DVFVGNSLISFYAKCGSMEDSLLMFNKLLKRN----IVSCNAVVCGYAQNGRGG 327
D+ N++++ K G +ED++ + N+L + +++ N V+ G A+ G+ G
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL----HSSTVLRNVVIGRQL 134
S ++ GF K + AI RM++ P+ T+ T+L V V I QL
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 135 HACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLK 190
+ G + + + ++D K +A K + + P+ ++Y++LV G +
Sbjct: 441 SS----KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 191 RGRFEDALQVFHEMPER-----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTES 245
G+ ++A++ FHE ER N V++N+++ G ++ + A++F + M+ G P E+
Sbjct: 497 EGKVDEAIKFFHEF-ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 246 TFPSVITAAAKIAALGMGK 264
++ +I +A GM K
Sbjct: 556 SYTILIEG---LAYEGMAK 571
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
AI + +M +PN ++ +LH + + + G ++ + +L
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 156 LYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV-- 209
K +E+A + P +++Y ++ G K G+ A+++ EM +++
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 210 --VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
++++++VGG S+ G +EA+ FF + R G P TF S++ K
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAF----GDTQHPNVVSYTALVCGYLKRGRFEDA 197
G ++ + L+ + +L +A K G P+V++Y ++ GY K G +A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 198 LQVFHEMP-ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAK 256
L V M +VV++N ++ +G ++A+ ML+ P T+ +I A +
Sbjct: 192 LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 257 IAALGMGKRFHACAIKCLGKL-------DVFVGNSLISFYAKCGSMEDSLLMFNKL---- 305
+ +G A+K L ++ DV N L++ K G +++++ N +
Sbjct: 252 DSGVGH-------AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 306 LKRNIVSCNAVVCGYAQNGR 325
+ N+++ N ++ GR
Sbjct: 305 CQPNVITHNIILRSMCSTGR 324
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Query: 176 PNVVSYTALVCGYLKRGRFEDALQVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIDM 235
P V + ++ +K G A +V ++NV++WN M+GG + EEA+ +M
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM 155
Query: 236 LREGFI-PTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGS 294
L I P + +F S + A A++ L K H+ I +L+ + ++L+ YAKCG
Sbjct: 156 LSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGD 215
Query: 295 MEDSLLMFNKLLKRNIVSCNAVVCGYAQNG 324
+ S +F + + ++ NA++ G+A +G
Sbjct: 216 IGTSREVFYSVKRNDVSIWNAMITGFATHG 245
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 5/160 (3%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLA-SKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKI 141
+I G+ + +E+A+ ML+ + I+PN+F+F + L + L ++ + +H+
Sbjct: 135 MIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDS 194
Query: 142 GLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVF 201
G+ N + SAL+D+Y K I +++ F + +V + A++ G+ G +A++VF
Sbjct: 195 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 254
Query: 202 HEMPERNV----VSWNAMVGGCSQTGHNEEAVNFFIDMLR 237
EM +V +++ ++ CS G EE +F M R
Sbjct: 255 SEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR 294
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 79 SATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACA 138
+ +++I GF + + DAI L S+M RP+ + T++ S + V +L
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 200
Query: 139 TKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCGYLKRGRF 194
+ G+ ++ ++L+ +A + D PNV+++TA++ ++K G+F
Sbjct: 201 ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 195 EDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSV 250
+A++++ EM R +V ++N+++ G G +EA M+ +G +P T+ ++
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 251 ITAAAKIAALGMG-KRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR- 308
I K + G K F A + L D N++I Y + G + + +F+++ R
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVG-DTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379
Query: 309 NIVSCNAVVCGYAQNGR 325
NI + + ++ G N R
Sbjct: 380 NIRTYSILLYGLCMNWR 396
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 124/295 (42%), Gaps = 64/295 (21%)
Query: 82 TIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVL----------HSSTVLRNVVIG 131
TII G K DA+ LF RM +R + T+ +++ ++ ++R++V+
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 132 RQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVSYTALVCG 187
+ NV +A++D++VK EA K + + P+V +Y +L+ G
Sbjct: 239 ----------DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 188 YLKRGRFEDALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPT 243
GR ++A Q+ M + +VV++N ++ G ++ +E F +M + G +
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 244 ESTF--------------------------PSVITAAAKIAALGMGKRFHACAI------ 271
T+ P++ T + + L M R +
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 272 KCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYAQ 322
K +LD+ N +I K G++ED+ +F L LK ++VS ++ G+ +
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 94 EDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSAL 153
E+ I LF +M+ S+ P+ F VL +N + L G+ +++ + +
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 154 LDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMPER-- 207
++ + S A G P+VV+ ++L+ G+ + R DA+ + +M E
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 208 --NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
+VV +N ++ G + G +AV F M R+G T+ S++ R
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 266 FHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKR----NIVSCNAVVCGYA 321
+ +V ++I + K G +++ ++ ++ +R ++ + N+++ G
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 322 QNGR 325
+GR
Sbjct: 291 MHGR 294
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 129/309 (41%), Gaps = 22/309 (7%)
Query: 38 SLATKHENTVVQKDIIPYG--LDPTT----FQVACHMFDEISDLTGESA----TTIICGF 87
L K E V+ D+ Y +D A +F E+ +S+ +++ G
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 88 AKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNV 147
K D L M++ +I PN TF +L + +L+ G++ N+
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 148 FVGSALLDLYVKLSTIEEAQKAFG----DTQHPNVVSYTALVCGYLKRGRFEDALQVFHE 203
+ L+D Y + + EA + P++V++T+L+ GY R +D ++VF
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 204 MPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAA 259
+ +R N V+++ +V G Q+G + A F +M+ G +P T+ ++
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 260 LGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNA 315
L K L + + ++I K G +ED+ +F L +K N+++
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 316 VVCGYAQNG 324
++ G + G
Sbjct: 514 MISGLCKKG 522
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 5 MKNLVSRLSVPTWITHQVVSCRYITKTVHTHYHSLATKHENTVVQKDIIPYGLDPTTFQV 64
+K++VSR VP IT V+ ++ + E + K++I G+ P
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKE---------GKLQEANELYKEMITRGISPNII-- 334
Query: 65 ACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTV 124
+ T++ G+ ++ +A ++ M+ +K P+ TF +++ +
Sbjct: 335 --------------TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 125 LRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----PNVVS 180
++ V G ++ +K GL +N S L+ + + I+ A++ F + P+V++
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 181 YTALVCGYLKRGRFEDALQVFHEMPERN----VVSWNAMVGGCSQTGHNEEAVNFFIDML 236
Y L+ G G+ E AL++F ++ + +V + ++ G + G E+A N F +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 237 REGFIPTESTFPSVITAAAKIAAL 260
+G P T+ +I+ K +L
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSL 524
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 175 HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERN----VVSWNAMVGGCSQTGHNEEAVN 230
P+VV+Y ++V G + G AL + +M ERN V +++ ++ + G + A++
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 231 FFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHACAIKCLGKLDVFVGNSLISFYA 290
F +M +G + T+ S++ K G + +V N L+ +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 291 KCGSMEDSLLMFNKLLKR----NIVSCNAVVCGYAQNGR 325
K G ++++ ++ +++ R NI++ N ++ GY R
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Query: 61 TFQVACHMFDEISDLTGESATTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLH 120
TFQV M + +I F K +C + A+ F RML+ I P+ T+ T++
Sbjct: 428 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Query: 121 SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLYVKLSTIEEAQKAFGDTQH----P 176
++ ++ + G + +++ Y ++ ++ G + P
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547
Query: 177 NVVSYTALVCGYLKRGRFEDALQVFHEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFF 232
NVV++T LV Y K GRF DA++ EM + + +NA++ +Q G +E+AVN F
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 233 IDMLREGFIPTESTFPSVITA 253
M +G P+ S+I A
Sbjct: 608 RVMTSDGLKPSLLALNSLINA 628
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 16/244 (6%)
Query: 96 AIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALLD 155
A+ + +M+ P+ TFG++LH ++ + L K G NV V + L+D
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 156 LYVKLSTIEEAQKAFGDTQHP----NVVSYTALVCGYLKRGRFEDALQVFHEMPER---- 207
K + A + + + +VV+Y L+ G GR+ DA ++ +M +R
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 208 NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR-F 266
+VV++ A++ + G+ +EA + +M++ P T+ S+I L K+ F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 267 HACAIK-CLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKL----LKRNIVSCNAVVCGYA 321
A K C +V N+LIS + K +++ + +F ++ +I + N ++ GY
Sbjct: 305 DLMASKGCFP--NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 322 QNGR 325
Q G+
Sbjct: 363 QVGK 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 95 DAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLASNVFVGSALL 154
DA L M+ S PN + T++ + I +L K GL ++V + LL
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 155 DLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVFHEMPERNV- 209
+A + D +P+VV++TAL+ ++K+G ++A +++ EM + +V
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 210 ---VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRF 266
V++N+++ G G +A F M +G P T+ ++I+ K + G +
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 267 HACAIKCLG-KLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI 310
+ C G D+F N+LI Y + G + +L +F ++ R +
Sbjct: 339 FQ-RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 109/252 (43%), Gaps = 12/252 (4%)
Query: 86 GFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIGLAS 145
GF EDA LF M+ S+ P+ F +L ++ LR G++
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 146 NVFVGSALLDLYVKLSTIEEAQKAFGDTQ----HPNVVSYTALVCGYLKRGRFEDALQVF 201
+++ + L+ + + S + A G P++V++ +L+ G+ R DA +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 202 HEMP----ERNVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKI 257
M E NVV +N ++ G + G A+ +M ++G T+ +++T
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 258 AALGMGKRFHACAIKCLGKLDVFVGNSLISFYAKCGSMEDSLLMFNKLLKRNI----VSC 313
R +K DV +LI + K G+++++ ++ ++++ ++ V+
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 314 NAVVCGYAQNGR 325
N+++ G +GR
Sbjct: 285 NSIINGLCMHGR 296
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 97/228 (42%), Gaps = 48/228 (21%)
Query: 83 IICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATKIG 142
+I F K A ++ M+ I P+ +G ++++ NV + G
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Query: 143 LASNVFVGSALLDLYVKLSTIEEAQKAF-------GDTQHPNVVS--------------- 180
+ N + ++L+ LY K+ ++EA+ + TQ+P+V +
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVR 700
Query: 181 -------------------YTALVCGYLKRGRFEDALQVFHEMPERNVV----SWNAMVG 217
+ ++C Y K GRFE+A Q+ +M E ++ S+N+++G
Sbjct: 701 KAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLG 760
Query: 218 GCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKR 265
+ G +EAV F +M+ G P +STF S+ T K LGM K+
Sbjct: 761 LFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK---LGMSKK 805
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 120/247 (48%), Gaps = 34/247 (13%)
Query: 102 RMLASKIRPNEFTFGTVLH----SSTVLRNVVIGRQLHACATKIGLASNVFVGSALLDLY 157
+M+ I P+ T ++++ S+++ V + Q+ K+G+ +V V + L+D
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME----KMGIKRDVVVDTILIDTL 58
Query: 158 VK----LSTIEEAQKAFGDTQHPNVVSYTALVCGYLKRGRFEDALQVFHEMPER----NV 209
K + +E ++ PNVV+Y++L+ G K GR DA + HEM + NV
Sbjct: 59 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 210 VSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVITAAAKIAALGMGKRFHAC 269
++++A++ ++ G + + + M++ S P+V T ++ I L M R
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQ------MSIDPNVFTYSSLIYGLCMHNRVDE- 171
Query: 270 AIKCLGKL-------DVFVGNSLISFYAKCGSMEDSLLMFNKLLKR----NIVSCNAVVC 318
AIK L + +V ++L + + K ++D + + + + +R N VSCN ++
Sbjct: 172 AIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 319 GYAQNGR 325
GY Q G+
Sbjct: 232 GYFQAGK 238
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 8/179 (4%)
Query: 81 TTIICGFAKRHCHEDAIHLFSRMLASKIRPNEFTFGTVLHSSTVLRNVVIGRQLHACATK 140
+++I G K DA M + KI PN TF ++ + + ++ +
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ 146
Query: 141 IGLASNVFVGSALLDLYVKLSTIEEAQKAF----GDTQHPNVVSYTALVCGYLKRGRFED 196
+ + NVF S+L+ + ++EA K PNVV+Y+ L G+ K R +D
Sbjct: 147 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 197 ALQVFHEMPER----NVVSWNAMVGGCSQTGHNEEAVNFFIDMLREGFIPTESTFPSVI 251
+++ +MP+R N VS N ++ G Q G + A+ F M G IP ++ V+
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVL 265