Miyakogusa Predicted Gene

Lj0g3v0110939.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0110939.1 tr|A9SNT6|A9SNT6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_165882,26.67,0.000000000001,ZF_BBOX,Zinc finger, B-box;
B-Box-type zinc finger,Zinc finger, B-box; zf-B_box,Zinc finger,
B-box; ,CUFF.6415.1
         (238 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06040.1 | Symbols: STO | B-box zinc finger family protein | ...   303   7e-83
AT2G31380.1 | Symbols: STH | salt tolerance homologue | chr2:133...   276   6e-75
AT1G06040.2 | Symbols: STO | B-box zinc finger family protein | ...   221   3e-58
AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc f...   144   7e-35
AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protei...   143   1e-34
AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 | chr1:283...   130   6e-31
AT4G10240.1 | Symbols:  | B-box zinc finger family protein | chr...   121   4e-28
AT4G39070.1 | Symbols:  | B-box zinc finger family protein | chr...   117   5e-27
AT2G21320.1 | Symbols:  | B-box zinc finger family protein | chr...    93   1e-19
AT4G38960.1 | Symbols:  | B-box type zinc finger family protein ...    92   3e-19
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517...    86   3e-17
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105...    81   5e-16
AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105...    80   2e-15
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487...    77   1e-14
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858...    77   1e-14
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w...    74   6e-14
AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein w...    73   2e-13
AT4G38960.3 | Symbols:  | B-box type zinc finger family protein ...    72   5e-13
AT2G47890.1 | Symbols:  | B-box type zinc finger protein with CC...    69   3e-12
AT2G47890.2 | Symbols:  | B-box type zinc finger protein with CC...    67   1e-11
AT1G28050.1 | Symbols:  | B-box type zinc finger protein with CC...    65   5e-11
AT2G33500.1 | Symbols:  | B-box type zinc finger protein with CC...    65   5e-11
AT2G33500.2 | Symbols:  | B-box type zinc finger protein with CC...    65   5e-11
AT1G68190.1 | Symbols:  | B-box zinc finger family protein | chr...    65   5e-11
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244...    65   5e-11
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244...    65   5e-11
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244...    65   5e-11
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244...    65   5e-11
AT5G48250.1 | Symbols:  | B-box type zinc finger protein with CC...    62   4e-10
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233...    60   1e-09
AT3G21880.1 | Symbols:  | B-box type zinc finger protein with CC...    57   8e-09
AT4G15250.1 | Symbols:  | B-box type zinc finger protein with CC...    56   2e-08
AT4G38960.2 | Symbols:  | B-box type zinc finger family protein ...    52   3e-07
AT1G68520.1 | Symbols:  | B-box type zinc finger protein with CC...    49   2e-06
AT1G25440.1 | Symbols:  | B-box type zinc finger protein with CC...    49   3e-06

>AT1G06040.1 | Symbols: STO | B-box zinc finger family protein |
           chr1:1828662-1829659 REVERSE LENGTH=248
          Length = 248

 Score =  303 bits (776), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 163/248 (65%), Positives = 188/248 (75%), Gaps = 10/248 (4%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
           MKIQCDVCEKAPATVICCADEAALC +CD+E+HAANKLASKHQRL LN LS K PRCDIC
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  QDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALGSN-CTKGNEKNRV 119
           Q+KAAFIFCVEDRAL C+DCDESIHVA S SANHQRFLATGI+VAL S  C+K  EKN+ 
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120

Query: 120 EPSD--PKAQEVPVKTPSQQVPSFTSS----WAVDDLLELTDFESPDKKQSLEF--GELE 171
           EPS+   KA ++P K+ SQQ    +S+    WAVDD    +D ES DKK  L+   GEL+
Sbjct: 121 EPSNNQQKANQIPAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDKKGQLDLGAGELD 180

Query: 172 WLADAGLFSEQFPHEGLAAAEVPQLSVTHTSSVVSYKAPKSFMSHKKPRIEV-IDEDDDE 230
           W +D G F +Q   + L AAEVP+LSV+H   V SYK  KS +SHKKPR E   D+DD+E
Sbjct: 181 WFSDMGFFGDQINDKALPAAEVPELSVSHLGHVHSYKPMKSNVSHKKPRFETRYDDDDEE 240

Query: 231 HFTVPDLG 238
           HF VPDLG
Sbjct: 241 HFIVPDLG 248


>AT2G31380.1 | Symbols: STH | salt tolerance homologue |
           chr2:13382150-13383302 FORWARD LENGTH=238
          Length = 238

 Score =  276 bits (707), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 144/241 (59%), Positives = 176/241 (73%), Gaps = 6/241 (2%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
           MKIQCDVCEKAPAT+ICCADEAALCAKCDVEVHAANKLASKHQRL L+ LS K P CDIC
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60

Query: 61  QDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALGS-NCTKGNEKNRV 119
            +KAAFIFCVEDRAL C+DCDE+ H   + SANHQRFLATGIRVAL S +C +  EKN  
Sbjct: 61  LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHF 120

Query: 120 EPSDPKAQEVPVKTPSQQVPSFTSSWAVDDLLELTDFESPDK-KQSLEFGELEWLADAGL 178
           +PS+   Q+   K P+QQ  + +  WA D+    +D +  +K K+ L+ GEL+WLA+ GL
Sbjct: 121 DPSN---QQSLSKPPTQQPAAPSPLWATDEFFSYSDLDCSNKEKEQLDLGELDWLAEMGL 177

Query: 179 FSEQFPHEGLAAAEVPQLSVTHTSSVVSYKAP-KSFMSHKKPRIEVIDEDDDEHFTVPDL 237
           F +Q   E L  AEVP+LS +H +   SY  P KS + +KK R+E   +D++EHF VPDL
Sbjct: 178 FGDQPDQEALPVAEVPELSFSHLAHAHSYNRPMKSNVPNKKQRLEYRYDDEEEHFLVPDL 237

Query: 238 G 238
           G
Sbjct: 238 G 238


>AT1G06040.2 | Symbols: STO | B-box zinc finger family protein |
           chr1:1828957-1829659 REVERSE LENGTH=177
          Length = 177

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 119/168 (70%), Positives = 134/168 (79%), Gaps = 7/168 (4%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
           MKIQCDVCEKAPATVICCADEAALC +CD+E+HAANKLASKHQRL LN LS K PRCDIC
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  QDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALGSN-CTKGNEKNRV 119
           Q+KAAFIFCVEDRAL C+DCDESIHVA S SANHQRFLATGI+VAL S  C+K  EKN+ 
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120

Query: 120 EPSD--PKAQEVPVKTPSQQVPSFTSS----WAVDDLLELTDFESPDK 161
           EPS+   KA ++P K+ SQQ    +S+    WAVDD    +D ES DK
Sbjct: 121 EPSNNQQKANQIPAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDK 168


>AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc
           finger protein 1 | chr1:29567370-29568662 FORWARD
           LENGTH=299
          Length = 299

 Score =  144 bits (362), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 64/108 (59%), Positives = 82/108 (75%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
           MKIQC+VCE A ATV+CCADEAALC  CD ++HAANKLA KHQR+ L+  ++ +P+CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  QDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALGS 108
           Q+ + F FC++DRAL C+ CD +IH      + HQRFL TGI+V L S
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLES 108


>AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protein 1
           | chr1:29567370-29568662 FORWARD LENGTH=319
          Length = 319

 Score =  143 bits (361), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 64/108 (59%), Positives = 82/108 (75%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
           MKIQC+VCE A ATV+CCADEAALC  CD ++HAANKLA KHQR+ L+  ++ +P+CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  QDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALGS 108
           Q+ + F FC++DRAL C+ CD +IH      + HQRFL TGI+V L S
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLES 108


>AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 |
           chr1:28366059-28367398 FORWARD LENGTH=331
          Length = 331

 Score =  130 bits (328), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 79/115 (68%), Gaps = 3/115 (2%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQR--LLLNCLSN-KLPRC 57
           MKI+CDVC+K  A+V C ADEA+LC  CD +VH ANKLASKH R  LL    SN   P C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 58  DICQDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALGSNCTK 112
           DICQDK A +FC +DRA+ CKDCD SIH A   +  H RFL TG++++  S+  K
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYK 115


>AT4G10240.1 | Symbols:  | B-box zinc finger family protein |
           chr4:6368967-6369526 REVERSE LENGTH=162
          Length = 162

 Score =  121 bits (303), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 10/111 (9%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLN------CLSNKL 54
           MKIQC+VCEKA A V+CC+DEA LC  CD++VH ANKL  +H R+ L         ++  
Sbjct: 1   MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60

Query: 55  PRCDICQDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVA 105
           P CDICQ++  + FC+EDRA+ C DCDE+IH   S    HQRFL +G++V+
Sbjct: 61  PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNS----HQRFLLSGVQVS 107


>AT4G39070.1 | Symbols:  | B-box zinc finger family protein |
           chr4:18205061-18206421 REVERSE LENGTH=242
          Length = 242

 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 86/145 (59%), Gaps = 2/145 (1%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNK-LPRCDI 59
           MKI C VC+K  A+V CCADEAALC  CD  VH ANKLA KH R  L   + K  P CDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 60  CQDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALGSNCTKGNEKNRV 119
           C ++ A +FC EDRA+ C++CD  IH A   +  H RFL TG++++   +       +  
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 120 EPSDPKAQEVPVKTPSQQVPSFTSS 144
             +  +A+  P K+ S +VPS  S+
Sbjct: 121 AAAFGRAKTRP-KSVSSEVPSSASN 144


>AT2G21320.1 | Symbols:  | B-box zinc finger family protein |
           chr2:9126502-9127652 FORWARD LENGTH=172
          Length = 172

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 3/104 (2%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
           M+I CD CE A A V C ADEAALC  CD +VH  NKLAS+H R+ L   SN  P CDIC
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNA-PSCDIC 59

Query: 61  QDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRV 104
           ++  AF +C  D +  C  CD  +HV G  +  H+RFL    R+
Sbjct: 60  ENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HRRFLLLRQRI 101


>AT4G38960.1 | Symbols:  | B-box type zinc finger family protein |
           chr4:18161576-18163045 FORWARD LENGTH=183
          Length = 183

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 3/104 (2%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
           M+I CD CE A A + C ADEAALC  CD +VH  NKLAS+H R+ L   SN  P CDIC
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNA-PCCDIC 59

Query: 61  QDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRV 104
           ++  AF +C  D +  C  CD  +HV G  +  H RFL    R+
Sbjct: 60  ENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HGRFLLLRQRI 101


>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
           chr5:5176297-5177473 REVERSE LENGTH=355
          Length = 355

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 77/174 (44%), Gaps = 26/174 (14%)

Query: 5   CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQDKA 64
           CD C  A  TV C AD A LC+ CD +VHAAN+LAS+H+R+ +         C  C+   
Sbjct: 12  CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAP 62

Query: 65  AFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALGSNCTKGNEKNRVEPSDP 124
           A  FC  D A  C  CD  IH A  L+  HQR     I      + T  N       +DP
Sbjct: 63  AAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPIS-EYSYSSTATNHSCETTVTDP 121

Query: 125 KAQEVPVKTPSQQVPSFTSSWAV----------------DDLLELTDFESPDKK 162
           + + V  +    +  +  +SW +                D+ L L D+ S DK+
Sbjct: 122 ENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGDEFLNLVDYSSSDKQ 175


>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
           chr2:10566959-10567946 FORWARD LENGTH=294
          Length = 294

 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 9/103 (8%)

Query: 5   CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQDKA 64
           CD C+   AT+ C AD A LC  CD ++H ANKLAS+H+R+ L         C++C+   
Sbjct: 8   CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58

Query: 65  AFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALG 107
           A + C  D A  C  CD  IH A  LS  H+R   T    A+G
Sbjct: 59  AHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVG 101


>AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
           chr2:10566959-10567621 FORWARD LENGTH=220
          Length = 220

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 9/103 (8%)

Query: 5   CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQDKA 64
           CD C+   AT+ C AD A LC  CD ++H ANKLAS+H+R+ L         C++C+   
Sbjct: 8   CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58

Query: 65  AFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALG 107
           A + C  D A  C  CD  IH A  LS  H+R   T    A+G
Sbjct: 59  AHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVG 101


>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
          chr3:487438-488624 REVERSE LENGTH=347
          Length = 347

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 47/92 (51%), Gaps = 9/92 (9%)

Query: 5  CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQDKA 64
          CD C  A  TV C AD A LC  CD  VHAAN++AS+H+R+ +         C  C+   
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAP 66

Query: 65 AFIFCVEDRALFCKDCDESIHVAGSLSANHQR 96
          A   C  D A  C  CD  IH A  L+  HQR
Sbjct: 67 AAFLCKADAASLCTACDAEIHSANPLARRHQR 98



 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 32/47 (68%)

Query: 5   CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLS 51
           C  CE APA  +C AD A+LC  CD E+H+AN LA +HQR+ +  LS
Sbjct: 59  CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLS 105


>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
           chr5:8589325-8590949 FORWARD LENGTH=406
          Length = 406

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 9/96 (9%)

Query: 5   CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQDKA 64
           CD C+ A A + C  D A LC  CD +VHAANKLAS+H R+ +         C++C+   
Sbjct: 50  CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAP 100

Query: 65  AFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLAT 100
           A + C  D A  C  CD  IH A  L+  H+R   T
Sbjct: 101 AHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 136


>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
           CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
          Length = 373

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 9/125 (7%)

Query: 5   CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQDKA 64
           CD C     TV C AD A LC  CD +VH+AN++AS+H+R+ +         C+ C+   
Sbjct: 20  CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAP 70

Query: 65  AFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALGSNCTKGNEKNRVEPSDP 124
           A   C  D A  C  CD  +H A  L+  HQR     I     S+ T  + ++    +DP
Sbjct: 71  AAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDP 130

Query: 125 KAQEV 129
           + + V
Sbjct: 131 EKRLV 135


>AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein with
           CCT domain | chr5:5171873-5172697 REVERSE LENGTH=274
          Length = 274

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 9/125 (7%)

Query: 5   CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQDKA 64
           CD C     TV C AD A LC  CD +VH+AN++AS+H+R+ +         C+ C+   
Sbjct: 20  CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAP 70

Query: 65  AFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGIRVALGSNCTKGNEKNRVEPSDP 124
           A   C  D A  C  CD  +H A  L+  HQR     I     S+ T  + ++    +DP
Sbjct: 71  AAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDP 130

Query: 125 KAQEV 129
           + + V
Sbjct: 131 EKRLV 135


>AT4G38960.3 | Symbols:  | B-box type zinc finger family protein |
           chr4:18161576-18163045 FORWARD LENGTH=226
          Length = 226

 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 62/147 (42%), Gaps = 46/147 (31%)

Query: 1   MKIQCDVCEKAPATVICCADEAALCAKCD------------------------------- 29
           M+I CD CE A A + C ADEAALC  CD                               
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60

Query: 30  ------------VEVHAANKLASKHQRLLLNCLSNKLPRCDICQDKAAFIFCVEDRALFC 77
                       + VH  NKLAS+H R+ L   SN  P CDIC++  AF +C  D +  C
Sbjct: 61  IKMGTFCLQSLHLVVHMCNKLASRHVRVGLAEPSNA-PCCDICENAPAFFYCEIDGSSLC 119

Query: 78  KDCDESIHVAGSLSANHQRFLATGIRV 104
             CD  +HV G  +  H RFL    R+
Sbjct: 120 LQCDMVVHVGGKRT--HGRFLLLRQRI 144


>AT2G47890.1 | Symbols:  | B-box type zinc finger protein with CCT
          domain | chr2:19608245-19609476 FORWARD LENGTH=332
          Length = 332

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)

Query: 5  CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQDKA 64
          CD C+ + A V C AD A LC  CD +VH AN+L +KH R LL         CD C +  
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63

Query: 65 AFIFCVEDRALFCKDCDESIHVAGS 89
          + +FC  +R++ C++CD   H A S
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASS 88


>AT2G47890.2 | Symbols:  | B-box type zinc finger protein with CCT
          domain | chr2:19608245-19609036 FORWARD LENGTH=237
          Length = 237

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 9/85 (10%)

Query: 5  CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQDKA 64
          CD C+ + A V C AD A LC  CD +VH AN+L +KH R LL         CD C +  
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63

Query: 65 AFIFCVEDRALFCKDCDESIHVAGS 89
          + +FC  +R++ C++CD   H A S
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASS 88


>AT1G28050.1 | Symbols:  | B-box type zinc finger protein with CCT
           domain | chr1:9775768-9777657 REVERSE LENGTH=433
          Length = 433

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 9/101 (8%)

Query: 2   KIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQ 61
           ++ CD C +  A + C AD A LC  CD +VH AN L+ KH R  +         CD C 
Sbjct: 6   RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI---------CDNCG 56

Query: 62  DKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGI 102
           ++   + C  D  + C++CD  +H + S+S  H R    G 
Sbjct: 57  NEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97


>AT2G33500.1 | Symbols:  | B-box type zinc finger protein with CCT
           domain | chr2:14188159-14190046 REVERSE LENGTH=402
          Length = 402

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 9/100 (9%)

Query: 3   IQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQD 62
           + C+ C +  A + C AD A LC  CD  VH+AN L+ KH R  +         CD C  
Sbjct: 10  VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI---------CDNCSK 60

Query: 63  KAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGI 102
           +   + C  D  + C++CD  +H + S SA H+R    G 
Sbjct: 61  EPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100


>AT2G33500.2 | Symbols:  | B-box type zinc finger protein with CCT
           domain | chr2:14188159-14190046 REVERSE LENGTH=401
          Length = 401

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 9/100 (9%)

Query: 3   IQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQD 62
           + C+ C +  A + C AD A LC  CD  VH+AN L+ KH R  +         CD C  
Sbjct: 10  VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI---------CDNCSK 60

Query: 63  KAAFIFCVEDRALFCKDCDESIHVAGSLSANHQRFLATGI 102
           +   + C  D  + C++CD  +H + S SA H+R    G 
Sbjct: 61  EPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100


>AT1G68190.1 | Symbols:  | B-box zinc finger family protein |
          chr1:25559384-25561004 FORWARD LENGTH=356
          Length = 356

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 11/96 (11%)

Query: 1  MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
          M+  C+ C+   A V C AD A LC  CD +VH+AN L+ +H R +L         CD C
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL---------CDSC 60

Query: 61 QDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQR 96
          +++   + C + +   C  C++  H  G  S+ H+R
Sbjct: 61 KNQPCVVRCFDHKMFLCHGCNDKFHGGG--SSEHRR 94


>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
          chr3:2442494-2443901 FORWARD LENGTH=372
          Length = 372

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 9/85 (10%)

Query: 1  MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
          M   CD C +  + V C +D A LC  CD  VH+AN L+ +H R L+         C+ C
Sbjct: 1  MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51

Query: 61 QDKAAFIFCVEDRALFCKDCDESIH 85
            + A + CVE+R   C++CD S H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76


>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
          chr3:2442494-2443901 FORWARD LENGTH=372
          Length = 372

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 9/85 (10%)

Query: 1  MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
          M   CD C +  + V C +D A LC  CD  VH+AN L+ +H R L+         C+ C
Sbjct: 1  MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51

Query: 61 QDKAAFIFCVEDRALFCKDCDESIH 85
            + A + CVE+R   C++CD S H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76


>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
          chr3:2442494-2443901 FORWARD LENGTH=372
          Length = 372

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 9/85 (10%)

Query: 1  MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
          M   CD C +  + V C +D A LC  CD  VH+AN L+ +H R L+         C+ C
Sbjct: 1  MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51

Query: 61 QDKAAFIFCVEDRALFCKDCDESIH 85
            + A + CVE+R   C++CD S H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76


>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
          chr3:2442494-2443901 FORWARD LENGTH=372
          Length = 372

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 9/85 (10%)

Query: 1  MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
          M   CD C +  + V C +D A LC  CD  VH+AN L+ +H R L+         C+ C
Sbjct: 1  MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51

Query: 61 QDKAAFIFCVEDRALFCKDCDESIH 85
            + A + CVE+R   C++CD S H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76


>AT5G48250.1 | Symbols:  | B-box type zinc finger protein with CCT
          domain | chr5:19561719-19563113 REVERSE LENGTH=373
          Length = 373

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 11/98 (11%)

Query: 1  MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
          M   CD C +  + V C +D A LC  CD  VH+AN L+ +H R L+         C+ C
Sbjct: 1  MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV---------CERC 51

Query: 61 QDKAAFIFCVEDRALFCKDCDESIHVA--GSLSANHQR 96
            + A + C ++R   C++CD S H     + +++H+R
Sbjct: 52 NAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKR 89


>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
           chr5:23355573-23356729 FORWARD LENGTH=355
          Length = 355

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 33/41 (80%)

Query: 5   CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRL 45
           C+VCE+APA V C AD AALC  CD ++H+AN LAS+H+R+
Sbjct: 61  CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERV 101



 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 13/93 (13%)

Query: 4   QCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDICQDK 63
            CD C+   A V C  D A LC  CD  +H+     ++H+R+ +         C++C+  
Sbjct: 21  SCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV---------CEVCEQA 67

Query: 64  AAFIFCVEDRALFCKDCDESIHVAGSLSANHQR 96
            A + C  D A  C  CD  IH A  L++ H+R
Sbjct: 68  PAAVTCKADAAALCVSCDADIHSANPLASRHER 100


>AT3G21880.1 | Symbols:  | B-box type zinc finger protein with CCT
          domain | chr3:7706748-7708093 FORWARD LENGTH=364
          Length = 364

 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)

Query: 1  MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
          M+ +CD C  + A + C +D A LC  CDV VH+AN L+ +H R L+         C+ C
Sbjct: 1  MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI---------CEKC 51

Query: 61 QDKAAFIFCVEDRALFCKDC 80
            + A I C++++  +C+ C
Sbjct: 52 FSQPAAIRCLDEKVSYCQGC 71


>AT4G15250.1 | Symbols:  | B-box type zinc finger protein with CCT
          domain | chr4:8709942-8711106 REVERSE LENGTH=330
          Length = 330

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 9/80 (11%)

Query: 1  MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLSNKLPRCDIC 60
          M+ +CD C    A + C +D A LC  CDV VH+AN L+ +H R LL         C+ C
Sbjct: 1  MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL---------CEKC 51

Query: 61 QDKAAFIFCVEDRALFCKDC 80
            +   + C+ +    C+ C
Sbjct: 52 SLQPTAVHCMNENVSLCQGC 71


>AT4G38960.2 | Symbols:  | B-box type zinc finger family protein |
           chr4:18162300-18163045 FORWARD LENGTH=150
          Length = 150

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 36  NKLASKHQRLLLNCLSNKLPRCDICQDKAAFIFCVEDRALFCKDCDESIHVAGSLSANHQ 95
           NKLAS+H R+ L   SN  P CDIC++  AF +C  D +  C  CD  +HV G  +  H 
Sbjct: 3   NKLASRHVRVGLAEPSNA-PCCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HG 59

Query: 96  RFLATGIRV 104
           RFL    R+
Sbjct: 60  RFLLLRQRI 68


>AT1G68520.1 | Symbols:  | B-box type zinc finger protein with CCT
          domain | chr1:25709331-25710749 REVERSE LENGTH=406
          Length = 406

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 28/47 (59%)

Query: 5  CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLS 51
          CD C K  A   C AD+A LC  CD  VH+AN LA +H+R+ L   S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSAS 63


>AT1G25440.1 | Symbols:  | B-box type zinc finger protein with CCT
          domain | chr1:8933939-8935284 REVERSE LENGTH=417
          Length = 417

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 28/47 (59%)

Query: 5  CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLNCLS 51
          CD C K  A   C AD+A LC  CD  VH+AN LA +H+R+ L   S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTAS 63